Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0002949

Physical Location & Seq

Genomic Coordinates Forward (+)

18175130 .. 18182176

Gene Structure 7047 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g21460.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2469 bp

ATGGTAAAAATGGTGGCCATGGAGTTTGGGTGCGCAGTTGCTGTACTGTTTTCCCTTTTAATTATTGGCAAAGCTGATGTTTACATCGTGACGATTGAAGGAGAGCCTATTATAAGTTACCAAGGTGGTGTTGATGGATTTGAAGCCACTGCAGTGGAATCTGATGAAAAGATTGACACAACTAGTGAATCAGTCACATCGTATGCCCGACACTTGGAGAGTAAACACGATATGCTTCTTGGCATGTTGTTTGAGGAAGGGAGCTACCAAAAACTCTACAGCTATCAACATCTTATTAATGGATTTGCTGTCCACATTTCTCATGAACAGGCAGAAAGATTGATGCGTGCTCCTGGTGTGAAATCAGTGGAGAGAGATTGGAAGGTGAGGAGACTTACAACCCACACCCCACAGTTTTTAGGGCTCCCAACCGGAGTATGGCCGACAGGAGGTGGCTCCGATAGGGCTGGAGAAGATATTGTGATAGGGTTTGTGGACTCAGGGATTTATCCGCACCATCCAAGCTTTGCGAACCACAATACCGATCCTTATGGGCCTGTTCCAAAGTATAGAGGTAAATGTGAAGTTGATCCAGACACCAAGAGGAGCTTCTGTAATGGGAAGATTATTGGAGCTCACCATTTTGCCAAAGCTGCAATAGCAGCTGGAGTATTTAATCCTTCTATTGATTTTGCCTCTCCTATGGACGGTGATGGACATGGAAGTCACACTGCAGCTATTGCAGCTGGTAATAATGGAATTCCAGTGAGAATGCATGGTCATGAATTTGGGAAAGCAAGTGGGATGGCTCCCCGTGCCAGAATTGCTGTATATAAAGCCCTTTACAGGCTTTTTGGAGGGTTTGTAGCAGATGTAGTAGCCGCAATTGATCAGGCTGTGTATGATGGAGTGGATATACTGAGCCTTTCTGTGGGGCCAAACAGTCCTCCAGCTACCACGAAGACCACTTATTTGAATCCTTTTGATGCCACACTTCTTTCAGCTGTGAAAGCAGGTGTGTTTGTTGCACAAGCAGCTGGAAATGGAGGACCTTTTCCAAAAACTTTGGTTTCTTATAGTCCTTGGATAGCTTCTGTTGCTGCCGCCATTGATCGATCGCAGATACAAAAACCACCTAACACTTGGAAATGGAAAAATATTAGCTGGACTTGGGTTGTCACAATGACATCGACACATCCAAATCAAACATACACGCTGGTTGCTGCAAATGATGTGCTTCTTGATTCTTCTGTAGTGAAGTATAGCTCCTCAGACTGCCAGAAACCAGAAGTTTTAAACAAGAACTTGGTTCAGGGGAATATTCTTCTTTGTGGCTATTCATTTAATTTCGTTGTTGGTACTGCATCAATCAAGAAAGTGTCCGAAACAGCCAAAAGTCTTGGTGCAATCGGTTTTGTTCTTGCGGTGGAAAATGTTTCCCCGGGGACAAAATTTGATCCTGTTCCTGTAGGCGTTCCTGGGATTCTAATCACTGATGTTGAAAAGTCAATGGATCTTATAGATTATTACAACATCTCAACTGTTAGGGATTGGACTGGTCGTGTGAAGAGCTTCAAAGGTATAGGTAGCATTGGGAATGGTTTGATGCCTATACTCCACAAGTCTGCACCACAGGTGGCACTATTCTCTGCTAGAGGGCCCAACATCAAAGATTTCAGCTTCCAAGAAGCAGATCTTCTCAAACCGGATATTCTAGCTCCTGGTTCTCTGATTTGGGCTGCTTGGTCTCCAAATGGAACAGATGAACCAAATTATGTTGGGGAGGGATTTGCCATGATTTCTGGAACAAGTATGGCTGCACCACATATAGCGGGAATAGCTGCTCTTGTAAAGCAGAAGCACCCTCATTGGAGCCCTGCTGCCATCAAATCAGCTTTGATGACAACATCAACAACTATCGACAGGGCTGGAAAACCTCTTCAAGCACAACAATATTCTGAAACACAAACCATTAAGTTTGTCAGTGCCACCCCTTTTGATTATGGGAGTGGCCATGTTGATCCAAAAGCTGCTCTGGATCCTGGACTAATCTTTGATGCGGGCTATCAGGATTACTTGGGTTTCTTGTGTACAACAGCTGGTATTAATTCTAATGAGATAAAGAACTACACAAACTCCCCCTGCAACTACACTATGGGCCACCCGTCAAATTTCAACTCTCCGTCAATCACAGTAGCTCATCTTGTGAAAAGTCAAACAGTTACACGCATGGTCACAAATGTTGCTGAAGAAGAAACCTATGTGATCACAACCAGAATGGCTCCAGCCATTGCCATTGAAGCCAGCCCTCGGGCAATGACTCTGAGACCTGGTGCATCACGAAAGTTCTCAGTGACTCTGACAGTTCGGTCCATCACTGGAGCCTACAGTTTCGGAGAGGTGATAATGAAAGGTAGCCGGGGGCACAAAGTGAGGATCCCAGTAGTAGCTATGGGTTACCAACGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0016787 GO:0017171 GO:0019538 GO:0043170 GO:0044238 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8 fn3_5

Protein Analysis

823

Amino Acids

88.28

Weight (kDa)

7.99

Isoelectric Point (pI)

28.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002949)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19170 AT2G19170 AT4G30020 AT4G30020 AT4G30020 AT4G30020
fragaria_vesca	FvH4_4g07370 FvH4_4g07370 FvH4_4g07370 FvH4_4g07370 FvH4_4g07370 FvH4_4g07370 FvH4_4g07370 FvH4_4g07370 FvH4_4g07370
malus_domestica	MD13G1242900.v1.1 MD16G1249700.v1.1
prunus_persica	Prupe.1G076600_v2.0.a1 Prupe.1G076600_v2.0.a1 Prupe.1G076600_v2.0.a1 Prupe.1G076600_v2.0.a1
pyrus_communis	pycom13g21460 pycom16g20920 pycom16g20930
rosa_chinensis	RchiOBHm_Chr4g0399741 RchiOBHm_Chr4g0399751
rosa_laevigata	RLG00000009242
rosa_multiflora	Rmu_sc0005299.1_g000011 Rmu_sc0028740.1_g000001
rosa_roxburghii	Rroxscaffold_5G00344690
rosa_rugosa	Rorug04G0018500 Rorug04G0018600 Rorug04G0018700
rosa_samantha	Rh4AG096300 Rh4BG093700 Rh4CG105200 Rh4DG090100
rosa_wichuraiana	Rw4G007960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	113
AarI	CACCTGC	1 cut(s)	1004
AasI	GACNNNNNNGTC	2 cut(s)	723, 2368
Acc16I	TGCGCA	1 cut(s)	34
Acc36I	ACCTGC	1 cut(s)	1004
AciI	CCGC	6 cut(s)	512, 882, 1104, 1424, 1832, 2060
AclWI	GGATC	9 cut(s)	539, 584, 1451, 1521, 2015, 2033, 2046, 2431, 2444
AcoI	YGGCCR	3 cut(s)	15, 440, 2011
AcsI	RAATTY	4 cut(s)	759, 785, 1451, 2170
AcuI	CTGAAG	1 cut(s)	2268
AdeI	CACNNNGTG	1 cut(s)	2431
AfaI	GTAC	3 cut(s)	45, 1360, 2092
AfiI	CCNNNNNNNGG	7 cut(s)	214, 438, 449, 707, 846, 931, 2310
AgsI	TTSAA	8 cut(s)	98, 143, 976, 1502, 1576, 1943, 2176, 2300
AhlI	ACTAGT	1 cut(s)	182
AjnI	CCWGG	5 cut(s)	352, 1477, 1720, 2041, 2329
AjuI	GAANNNNNNNTTGG	2 cut(s)	593, 625
AleI	CACNNNNGTG	1 cut(s)	152
Alw21I	GWGCWC	2 cut(s)	352, 637
Alw26I	GTCTC	3 cut(s)	385, 1752, 2320
AlwI	GGATC	9 cut(s)	539, 584, 1451, 1521, 2015, 2033, 2046, 2431, 2444
AlwNI	CAGNNNCTG	1 cut(s)	41
Ama87I	CYCGRG	2 cut(s)	1441, 2310
AoxI	GGCC	7 cut(s)	15, 440, 554, 935, 1658, 2011, 2158
ApaI	GGGCCC	1 cut(s)	1662
ApoI	RAATTY	4 cut(s)	759, 785, 1451, 2170
ArsI	GACNNNNNNTTYG	2 cut(s)	955, 987
AseI	ATTAAT	2 cut(s)	297, 2106
Asp700I	GAANNNNTTC	1 cut(s)	1571
AspLEI	GCGC	1 cut(s)	35
AspS9I	GGNCC	7 cut(s)	554, 935, 1049, 1658, 1659, 2158, 2370
AsuC2I	CCSGG	3 cut(s)	1442, 1443, 2420
AsuHPI	GGTGA	4 cut(s)	397, 629, 722, 2413
AvaI	CYCGRG	2 cut(s)	1441, 2310
AvaII	GGWCC	2 cut(s)	1049, 2370
BaeGI	GKGCMC	2 cut(s)	1662, 2427
BalI	TGGCCA	2 cut(s)	17, 2013
BamHI	GGATCC	2 cut(s)	2038, 2436
BanII	GRGCYC	4 cut(s)	426, 637, 1662, 1877
BbsI	GAAGAC	1 cut(s)	968
Bbv12I	GWGCWC	2 cut(s)	352, 637
BccI	CCATC	7 cut(s)	128, 525, 707, 799, 899, 1892, 2381
BciT130I	CCWGG	5 cut(s)	354, 1479, 1722, 2043, 2331
BclI	TGATCA	2 cut(s)	889, 2265
BcnI	CCSGG	3 cut(s)	1442, 1443, 2420
BcoDI	GTCTC	3 cut(s)	385, 1752, 2320
BcuI	ACTAGT	1 cut(s)	182
BfaI	CTAG	3 cut(s)	183, 1653, 1715
BfmI	CTRYAG	6 cut(s)	150, 277, 732, 1251, 1467, 2386
BfuAI	ACCTGC	1 cut(s)	1004
BglII	AGATCT	1 cut(s)	1693
Bme1390I	CCNGG	8 cut(s)	354, 1442, 1443, 1479, 1722, 2043, 2331, 2420
Bme18I	GGWCC	2 cut(s)	1049, 2370
BmeT110I	CYCGRG	2 cut(s)	1441, 2310
BmgT120I	GGNCC	7 cut(s)	554, 935, 1049, 1658, 1659, 2158, 2370
BmrFI	CCNGG	8 cut(s)	354, 1442, 1443, 1479, 1722, 2043, 2331, 2420
BmrI	ACTGGG	1 cut(s)	2435
BmsI	GCATC	6 cut(s)	333, 976, 1373, 1596, 2047, 2345
BmuI	ACTGGG	1 cut(s)	2435
BpiI	GAAGAC	1 cut(s)	968
BpmI	CTGGAG	5 cut(s)	489, 687, 933, 2268, 2400
BpuMI	CCSGG	3 cut(s)	1442, 1443, 2420
Bsa29I	ATCGAT	1 cut(s)	1114
BsaBI	GATNNNNATC	1 cut(s)	1487
BsaI	GGTCTC	2 cut(s)	1752, 2320
BsaJI	CCNNGG	9 cut(s)	18, 121, 1082, 1440, 1441, 1442, 1478, 2309, 2419
BsaWI	WCCGGW	2 cut(s)	431, 1705
BsaXI	ACNNNNNCTCC	8 cut(s)	14, 44, 598, 628, 849, 879, 2120, 2150
Bsc4I	CCNNNNNNNGG	7 cut(s)	214, 438, 449, 707, 846, 931, 2310
Bse1I	ACTGG	4 cut(s)	764, 1561, 2383, 2441
Bse3DI	GCAATG	2 cut(s)	2289, 2322
Bse8I	GATNNNNATC	1 cut(s)	1487
BseBI	CCWGG	5 cut(s)	354, 1479, 1722, 2043, 2331
BseCI	ATCGAT	1 cut(s)	1114
BseDI	CCNNGG	9 cut(s)	18, 121, 1082, 1440, 1441, 1442, 1478, 2309, 2419
BseGI	GGATG	3 cut(s)	517, 810, 1195
BseJI	GATNNNNATC	1 cut(s)	1487
BseLI	CCNNNNNNNGG	7 cut(s)	214, 438, 449, 707, 846, 931, 2310
BseMI	GCAATG	2 cut(s)	2289, 2322
BseMII	CTCAG	5 cut(s)	513, 911, 1284, 2315, 2364
BseNI	ACTGG	4 cut(s)	764, 1561, 2383, 2441
BseRI	GAGGAG	3 cut(s)	403, 619, 1258
BseSI	GKGCMC	2 cut(s)	1662, 2427
BsgI	GTGCAG	2 cut(s)	1611, 1803
Bsh1285I	CGRYCG	1 cut(s)	1118
BshFI	GGCC	7 cut(s)	17, 442, 556, 937, 1660, 2013, 2160
BshVI	ATCGAT	1 cut(s)	1114
BsiEI	CGRYCG	1 cut(s)	1118
BsiHKAI	GWGCWC	2 cut(s)	352, 637
BsiHKCI	CYCGRG	2 cut(s)	1441, 2310
BsiSI	CCGG	4 cut(s)	432, 1442, 1706, 2419
BslFI	GGGAC	1 cut(s)	1459
BslI	CCNNNNNNNGG	7 cut(s)	214, 438, 449, 707, 846, 931, 2310
BsmAI	GTCTC	3 cut(s)	385, 1752, 2320
BsmFI	GGGAC	1 cut(s)	1459
BsmI	GAATGC	1 cut(s)	777
BsnI	GGCC	7 cut(s)	17, 442, 556, 937, 1660, 2013, 2160
Bso31I	GGTCTC	2 cut(s)	1752, 2320
BsoBI	CYCGRG	2 cut(s)	1441, 2310
Bsp120I	GGGCCC	1 cut(s)	1658
Bsp1286I	GDGCHC	6 cut(s)	352, 426, 637, 1662, 1877, 2427
Bsp1407I	TGTACA	1 cut(s)	2090
Bsp19I	CCATGG	1 cut(s)	18
BspACI	CCGC	6 cut(s)	512, 882, 1104, 1424, 1832, 2060
BspANI	GGCC	7 cut(s)	17, 442, 556, 937, 1660, 2013, 2160
BspCNI	CTCAG	5 cut(s)	512, 912, 1283, 2316, 2363
BspDI	ATCGAT	1 cut(s)	1114
BspHI	TCATGA	2 cut(s)	322, 781
BspMAI	CTGCAG	2 cut(s)	154, 736
BspMI	ACCTGC	1 cut(s)	1004
BspPI	GGATC	9 cut(s)	539, 584, 1451, 1521, 2015, 2033, 2046, 2431, 2444
BspQI	GCTCTTC	1 cut(s)	1562
BspTNI	GGTCTC	2 cut(s)	1752, 2320
BsrDI	GCAATG	2 cut(s)	2289, 2322
BsrGI	TGTACA	1 cut(s)	2090
BsrI	ACTGG	4 cut(s)	764, 1561, 2383, 2441
BssECI	CCNNGG	9 cut(s)	18, 121, 1082, 1440, 1441, 1442, 1478, 2309, 2419
BssT1I	CCWWGG	3 cut(s)	18, 121, 1082
Bst2UI	CCWGG	5 cut(s)	354, 1479, 1722, 2043, 2331
Bst6I	CTCTTC	2 cut(s)	1562, 1944
BstAPI	GCANNNNNTGC	1 cut(s)	740
BstAUI	TGTACA	1 cut(s)	2090
BstC8I	GCNNGC	3 cut(s)	348, 2062, 2305
BstDEI	CTNAG	5 cut(s)	499, 920, 1270, 2324, 2350
BstDSI	CCRYGG	1 cut(s)	18
BstEII	GGTNACC	1 cut(s)	2456
BstF5I	GGATG	3 cut(s)	517, 810, 1195
BstHHI	GCGC	1 cut(s)	35
BstMAI	GTCTC	3 cut(s)	385, 1752, 2320
BstMCI	CGRYCG	1 cut(s)	1118
BstNI	CCWGG	5 cut(s)	354, 1479, 1722, 2043, 2331
BstNSI	RCATGY	1 cut(s)	247
BstPI	GGTNACC	1 cut(s)	2456
BstSCI	CCNGG	8 cut(s)	352, 1440, 1441, 1477, 1720, 2041, 2329, 2418
BstSFI	CTRYAG	6 cut(s)	150, 277, 732, 1251, 1467, 2386
BstSLI	GKGCMC	2 cut(s)	1662, 2427
BstV2I	GAAGAC	1 cut(s)	968
BstX2I	RGATCY	4 cut(s)	1513, 1693, 2038, 2436
BstXI	CCANNNNNNTGG	1 cut(s)	154
BstYI	RGATCY	4 cut(s)	1513, 1693, 2038, 2436
Bsu15I	ATCGAT	1 cut(s)	1114
BsuRI	GGCC	7 cut(s)	17, 442, 556, 937, 1660, 2013, 2160
BsuTUI	ATCGAT	1 cut(s)	1114
BtgI	CCRYGG	1 cut(s)	18
BtsCI	GGATG	3 cut(s)	517, 810, 1195
BtsI	GCAGTG	3 cut(s)	147, 159, 729
BtsIMutI	CAGTG	9 cut(s)	147, 159, 372, 729, 771, 1491, 1990, 2358, 2376
BveI	ACCTGC	1 cut(s)	1004
Cac8I	GCNNGC	3 cut(s)	348, 2062, 2305
CaiI	CAGNNNCTG	1 cut(s)	41
CciI	TCATGA	2 cut(s)	322, 781
CfoI	GCGC	1 cut(s)	35
Cfr13I	GGNCC	7 cut(s)	554, 935, 1049, 1658, 1659, 2158, 2370
Cfr9I	CCCGGG	1 cut(s)	1441
ClaI	ATCGAT	1 cut(s)	1114
CsiI	ACCWGGT	1 cut(s)	2329
Csp6I	GTAC	3 cut(s)	44, 1359, 2091
CspCI	CAANNNNNGTGG	2 cut(s)	1978, 2013
CviAII	CATG	9 cut(s)	19, 244, 323, 719, 776, 782, 1795, 2015, 2230
CviQI	GTAC	3 cut(s)	44, 1359, 2091
DdeI	CTNAG	5 cut(s)	499, 920, 1270, 2324, 2350
DraI	TTTAAA	1 cut(s)	1296
DraIII	CACNNNGTG	1 cut(s)	2431
DrdI	GACNNNNNNGTC	2 cut(s)	723, 2368
DseDI	GACNNNNNNGTC	2 cut(s)	723, 2368
EaeI	YGGCCR	3 cut(s)	15, 440, 2011
Eam1104I	CTCTTC	2 cut(s)	1562, 1944
EarI	CTCTTC	2 cut(s)	1562, 1944
Ecl136II	GAGCTC	1 cut(s)	635
Eco130I	CCWWGG	3 cut(s)	18, 121, 1082
Eco24I	GRGCYC	4 cut(s)	426, 637, 1662, 1877
Eco31I	GGTCTC	2 cut(s)	1752, 2320
Eco47I	GGWCC	2 cut(s)	1049, 2370
Eco53kI	GAGCTC	1 cut(s)	635
Eco57I	CTGAAG	1 cut(s)	2268
Eco88I	CYCGRG	2 cut(s)	1441, 2310
Eco91I	GGTNACC	1 cut(s)	2456
EcoICRI	GAGCTC	1 cut(s)	635
EcoO109I	RGGNCCY	2 cut(s)	1049, 1658
EcoO65I	GGTNACC	1 cut(s)	2456
EcoRI	GAATTC	1 cut(s)	759
EcoRII	CCWGG	5 cut(s)	352, 1477, 1720, 2041, 2329
EcoT14I	CCWWGG	3 cut(s)	18, 121, 1082
EcoT22I	ATGCAT	1 cut(s)	777
EcoT38I	GRGCYC	4 cut(s)	426, 637, 1662, 1877
ErhI	CCWWGG	3 cut(s)	18, 121, 1082
FaeI	CATG	9 cut(s)	22, 247, 326, 722, 779, 785, 1798, 2018, 2233
FalI	AAGNNNNNCTT	4 cut(s)	593, 625, 1680, 1712
FaqI	GGGAC	1 cut(s)	1459
FatI	CATG	9 cut(s)	18, 243, 322, 718, 775, 781, 1794, 2014, 2229
FauI	CCCGC	2 cut(s)	1825, 2053
FbaI	TGATCA	2 cut(s)	889, 2265
FokI	GGATG	3 cut(s)	504, 817, 1182
FriOI	GRGCYC	4 cut(s)	426, 637, 1662, 1877
FspBI	CTAG	3 cut(s)	183, 1653, 1715
FspI	TGCGCA	1 cut(s)	34
GlaI	GCGC	1 cut(s)	34
GsuI	CTGGAG	5 cut(s)	489, 687, 933, 2268, 2400
HaeIII	GGCC	7 cut(s)	17, 442, 556, 937, 1660, 2013, 2160
HapII	CCGG	4 cut(s)	432, 1442, 1706, 2419
HhaI	GCGC	1 cut(s)	35
Hin1II	CATG	9 cut(s)	22, 247, 326, 722, 779, 785, 1798, 2018, 2233
Hin6I	GCGC	1 cut(s)	33
HinP1I	GCGC	1 cut(s)	33
HindIII	AAGCTT	1 cut(s)	523
HinfI	GANTC	8 cut(s)	158, 188, 497, 976, 1244, 1483, 2320, 2356
HpaII	CCGG	4 cut(s)	432, 1442, 1706, 2419
HphI	GGTGA	4 cut(s)	397, 629, 722, 2413
Hpy166II	GTNNAC	5 cut(s)	82, 224, 313, 496, 2091
Hpy188I	TCNGA	9 cut(s)	163, 460, 1273, 1384, 1731, 1960, 2325, 2361, 2396
Hpy8I	GTNNAC	5 cut(s)	82, 224, 313, 496, 2091
HpyAV	CCTTC	4 cut(s)	92, 251, 376, 690
HpyF3I	CTNAG	5 cut(s)	499, 920, 1270, 2324, 2350
Hsp92II	CATG	9 cut(s)	22, 247, 326, 722, 779, 785, 1798, 2018, 2233
HspAI	GCGC	1 cut(s)	33
Ksp22I	TGATCA	2 cut(s)	889, 2265
LguI	GCTCTTC	1 cut(s)	1562
LweI	GCATC	6 cut(s)	333, 976, 1373, 1596, 2047, 2345
MabI	ACCWGGT	1 cut(s)	2329
MaeI	CTAG	3 cut(s)	183, 1653, 1715
MaeIII	GTNAC	9 cut(s)	88, 116, 193, 725, 1177, 2221, 2233, 2353, 2456
MfeI	CAATTG	1 cut(s)	885
MflI	RGATCY	4 cut(s)	1513, 1693, 2038, 2436
MhlI	GDGCHC	6 cut(s)	352, 426, 637, 1662, 1877, 2427
MlsI	TGGCCA	2 cut(s)	17, 2013
MluNI	TGGCCA	2 cut(s)	17, 2013
MlyI	GAGTC	3 cut(s)	491, 2314, 2350
Mox20I	TGGCCA	2 cut(s)	17, 2013
Mph1103I	ATGCAT	1 cut(s)	777
MroXI	GAANNNNTTC	1 cut(s)	1571
MscI	TGGCCA	2 cut(s)	17, 2013
MseI	TTAA	7 cut(s)	59, 297, 675, 1295, 1344, 1974, 2106
MslI	CAYNNNNRTG	2 cut(s)	152, 780
Msp20I	TGGCCA	2 cut(s)	17, 2013
MspA1I	CMGCKG	5 cut(s)	665, 746, 1004, 1037, 2099
MspI	CCGG	4 cut(s)	432, 1442, 1706, 2419
MspR9I	CCNGG	8 cut(s)	354, 1442, 1443, 1479, 1722, 2043, 2331, 2420
MunI	CAATTG	1 cut(s)	885
Mva1269I	GAATGC	1 cut(s)	777
MvaI	CCWGG	5 cut(s)	354, 1479, 1722, 2043, 2331
NciI	CCSGG	3 cut(s)	1442, 1443, 2420
NcoI	CCATGG	1 cut(s)	18
NlaIII	CATG	9 cut(s)	22, 247, 326, 722, 779, 785, 1798, 2018, 2233
NmuCI	GTSAC	6 cut(s)	88, 193, 725, 1177, 2233, 2353
NsbI	TGCGCA	1 cut(s)	34
NsiI	ATGCAT	1 cut(s)	777
NspI	RCATGY	1 cut(s)	247
OliI	CACNNNNGTG	1 cut(s)	152
PagI	TCATGA	2 cut(s)	322, 781
PaqCI	CACCTGC	1 cut(s)	1004
PciSI	GCTCTTC	1 cut(s)	1562
PctI	GAATGC	1 cut(s)	777
PdmI	GAANNNNTTC	1 cut(s)	1571
PfeI	GAWTC	5 cut(s)	158, 188, 976, 1244, 1483
PfoI	TCCNGGA	1 cut(s)	2041
Ple19I	CGATCG	1 cut(s)	1118
PleI	GAGTC	3 cut(s)	491, 2314, 2350
PpsI	GAGTC	3 cut(s)	491, 2314, 2350
PpuMI	RGGWCCY	1 cut(s)	1049
PshBI	ATTAAT	2 cut(s)	297, 2106
PsiI	TTATAA	1 cut(s)	113
Psp124BI	GAGCTC	1 cut(s)	637
Psp5II	RGGWCCY	1 cut(s)	1049
Psp6I	CCWGG	5 cut(s)	352, 1477, 1720, 2041, 2329
PspEI	GGTNACC	1 cut(s)	2456
PspGI	CCWGG	5 cut(s)	352, 1477, 1720, 2041, 2329
PspOMI	GGGCCC	1 cut(s)	1658
PspPI	GGNCC	7 cut(s)	554, 935, 1049, 1658, 1659, 2158, 2370
PspPPI	RGGWCCY	1 cut(s)	1049
PstI	CTGCAG	2 cut(s)	154, 736
PstNI	CAGNNNCTG	1 cut(s)	41
PsuI	RGATCY	4 cut(s)	1513, 1693, 2038, 2436
PvuI	CGATCG	1 cut(s)	1118
PvuII	CAGCTG	5 cut(s)	665, 746, 1004, 1037, 2099
RsaI	GTAC	3 cut(s)	45, 1360, 2092
RsaNI	GTAC	3 cut(s)	44, 1359, 2091
RseI	CAYNNNNRTG	2 cut(s)	152, 780
SacI	GAGCTC	1 cut(s)	637
SapI	GCTCTTC	1 cut(s)	1562
SaqAI	TTAA	7 cut(s)	59, 297, 675, 1295, 1344, 1974, 2106
Sau96I	GGNCC	7 cut(s)	554, 935, 1049, 1658, 1659, 2158, 2370
SchI	GAGTC	3 cut(s)	491, 2314, 2350
ScrFI	CCNGG	8 cut(s)	354, 1442, 1443, 1479, 1722, 2043, 2331, 2420
SduI	GDGCHC	6 cut(s)	352, 426, 637, 1662, 1877, 2427
SexAI	ACCWGGT	1 cut(s)	2329
SfaNI	GCATC	6 cut(s)	333, 976, 1373, 1596, 2047, 2345
SfcI	CTRYAG	6 cut(s)	150, 277, 732, 1251, 1467, 2386
SinI	GGWCC	2 cut(s)	1049, 2370
SmaI	CCCGGG	1 cut(s)	1443
SmiMI	CAYNNNNRTG	2 cut(s)	152, 780
SpeI	ACTAGT	1 cut(s)	182
SsiI	CCGC	6 cut(s)	512, 882, 1104, 1424, 1832, 2060
SspI	AATATT	3 cut(s)	1159, 1321, 1955
SspMI	CTAG	3 cut(s)	183, 1653, 1715
SstI	GAGCTC	1 cut(s)	637
StyD4I	CCNGG	8 cut(s)	352, 1440, 1441, 1477, 1720, 2041, 2329, 2418
StyI	CCWWGG	3 cut(s)	18, 121, 1082
TaqI	TCGA	3 cut(s)	1114, 1190, 1920
TaqII	GACCGA	1 cut(s)	2358
TatI	WGTACW	2 cut(s)	43, 2090
TauI	GCSGC	2 cut(s)	884, 1106
TfiI	GAWTC	5 cut(s)	158, 188, 976, 1244, 1483
Tru1I	TTAA	7 cut(s)	59, 297, 675, 1295, 1344, 1974, 2106
Tru9I	TTAA	7 cut(s)	59, 297, 675, 1295, 1344, 1974, 2106
TscAI	CASTG	9 cut(s)	154, 159, 372, 736, 771, 1498, 1990, 2358, 2383
TseFI	GTSAC	6 cut(s)	88, 193, 725, 1177, 2233, 2353
Tsp45I	GTSAC	6 cut(s)	88, 193, 725, 1177, 2233, 2353
TspDTI	ATGAA	6 cut(s)	180, 339, 798, 1329, 1779, 2423
TspGWI	ACGGA	1 cut(s)	2172
TspMI	CCCGGG	1 cut(s)	1441
TspRI	CASTG	9 cut(s)	154, 159, 372, 736, 771, 1498, 1990, 2358, 2383
VpaK11BI	GGWCC	2 cut(s)	1049, 2370
VspI	ATTAAT	2 cut(s)	297, 2106
XapI	RAATTY	4 cut(s)	759, 785, 1451, 2170
XceI	RCATGY	1 cut(s)	247
XcmI	CCANNNNNNNNNTGG	2 cut(s)	435, 1140
XmaI	CCCGGG	1 cut(s)	1441
XmnI	GAANNNNTTC	1 cut(s)	1571
XspI	CTAG	3 cut(s)	183, 1653, 1715
Zsp2I	ATGCAT	1 cut(s)	777

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.