Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0002949

Physical Location & Seq

Genomic Coordinates Forward (+)

19399059 .. 19415800

Gene Structure 16742 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG105200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2319 bp

ATGCAGTCATTCACGGTGATTAGGGAGGTGATGATGCCGGCATTCAGGGAGGTGGTGGCAGTATATGATCGAACATCTACCGGTTGTGGTAGTGAAGATCACACGAGATCTGAATGCGATTTGGACCTGTCTGAGTATGATCCAGCAGTCGTTGGCCAAGACACCATTGCTGAGATCATGAGACGCTTCAATGAGGTAGAGGTTGAATGCCCTCACCCATTCCTGGATCTCTCTCTCTCTCTGCAAATCTTGTGGAGTATTGAAGTTGCATACTTCAATGGTAAAACTGAGGGCTATGGAGTTTTGGCTGATGTTTATATTGTGACTGTCGAAGGAGAGCCTATTGTAAGTTATAGAGGTGATGTTGATGGTTTTGAAGCCACTGCTGTGGAATCTGATGAAAAGATCGACACCACTAGTGAATCAGTCACGTCCTATGCTCGACACCTTGAGAATAAACATGATATGCTTCTTGGAATGCTGTTTGAGCAAGGGACCTACAAGAAACTCTACAGCTATCAGCATCTTATAAATGGCTTTGCAGTTCATATTTCTCCTGAGCAGGCAGAAAGACTAATGCGTGCTCCGGGTGTGAAATCCGTGGAGAGAGATTGGAAGGTCCGGAGGCTTACAACTCACACACCACAGTTTTTAGGGCTTCCAACCGGAGTATGGCCAACAGGAGGTGGCTTTGATAGGGCTGGAGAAAATATTGTGATAGGGTTTGTGGACTCGGGGATTTACCCTCATCATCCAAGCTTTGCAAGCCCCAGTACTGATCCTTATGGGCCTGTTCCCAAGTACAGAGGTACATGTGAAGTTGACCCAGACACCAAGAAGAGCTTCTGTAACGGAAAGATTATTGGAGCCCACCATTTCGCCAAAGCTGCAATAGCAGCTGGGGTGTTTAATCCAGTTATTGATTTCGCCTCTCCTATGGATGGTGATGGACATGGAAGTCACACTGCAGCTATTGCAGCTGGAAACAATGGAATTCCTGTCAGAATGCATGGCCATGAATTTGGCAAAGCAAGTGGGATGGCTCCCCGTGCCAGAATTGCTGTATATAAAGCTCTTTACAGGCTCTTTGGAGGGTTTGTAGCAGATGTAGTAGCCGCAATTGATCAGGCTGTTTATGATGGAGTGGATATACTGAGCCTTTCTGTGGGGCCAAACAGTCCTCCAGCTACCACCAAGACCACTTATTTGAACCCGTTTGATGCCACACTTCTTTCAGCTGTGAAAGCGGGTGTATTTGTAGCACAGGCAGCTGGAAATGGAGGACCTTTTCCGAAAACTTTGGTTTCTTATAGCCCTTGGATAGCTTCTGTTGCTGCTGCCATAGATGACCGGAGATACAAAAACCATTTCACGCTTGGGAATGGAAAAATATTACCTGGACTTGGGTTGTCACCATCTACACATCCAAATCGAACGTACGCACTGGTTGCTGCAAATGATGTGCTTTTGGATTCTTCAGTAGTGAAGTATAGCCCCTCAGACTGCCAGAGACCAGAAGTTTTAAACAAGAACTTGGTTGAGGGGAATATTCTTCTTTGTGGCTATTCGTTCAATTTTGTTGCTGGCTCTGCATCAATCAAGAAAGTCTCGGAAACAGCTAGAAGTCTTGGTGCAATTGGCTTTGTTCTCGCTGTGGAAAATGTTTCCCCAGGAACCAAATTTGATCCTGTTCCTTCTGGAATTCCTGGGATTGTAATCACTGATGTTAAGAAGTCAATGGATCTTATAGATTACTACAACATCTCCACATCAAGAGATTGGACTGGTCGAGTTAAGAGTTTCAAAGCTATAGGTAGCATTGGGGATGGTTTGACGCCTATACTCCATAAATCAGCACCCCAGGTGGCAATATTCTCTGCTCGAGGACCCAATATTAAAGATTTCAGCTTCCAAGATGCGGATCTTCTCAAACCAGATATTCTAGCTCCTGGTTCTCTGATTTGGGCTGCCTGGTCCCCTAATGGAACAGATGAGCCTGATTATGTTGGGGAGGGATTTGCCATGATTTCTGGAACAAGTATGGCTGCACCGCATATAGCAGGAATTGCTGCTCTTATAAAGCAGAAGCACCCTCATTGGAGCCCTGCTGCCATCAAGTCATCCTTGATGACAACATCAACAACTATAGACCGGGCTGGAAGGCCTCTCCAGGCACAACAGACTTCCGAAACACAAGGCATTAAGTTTGTGAGTGCTACTCCTTTTGATTATGGTAGTGGTCATGTTGATCCAAGGGCTGCTCTAGATCCTGGACTAATCTTTGACGTGGGTATGTATTCTTTTTCACTTCGTAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0016787 GO:0017171 GO:0019538 GO:0043170 GO:0044238 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8 fn3_5

Protein Analysis

772

Amino Acids

83.0

Weight (kDa)

5.88

Isoelectric Point (pI)

33.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	106 - 208	3.3e-15	Peptidase inhibitor I9
Peptidase_S8	PF00082	235 - 721	1.8e-40	Subtilase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002949)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19170 AT2G19170 AT4G30020 AT4G30020 AT4G30020 AT4G30020
fragaria_vesca	FvH4_4g07370 FvH4_4g07370 FvH4_4g07370 FvH4_4g07370 FvH4_4g07370 FvH4_4g07370 FvH4_4g07370 FvH4_4g07370 FvH4_4g07370
malus_domestica	MD13G1242900.v1.1 MD16G1249700.v1.1
prunus_persica	Prupe.1G076600_v2.0.a1 Prupe.1G076600_v2.0.a1 Prupe.1G076600_v2.0.a1 Prupe.1G076600_v2.0.a1
pyrus_communis	pycom13g21460 pycom16g20920 pycom16g20930
rosa_chinensis	RchiOBHm_Chr4g0399741 RchiOBHm_Chr4g0399751
rosa_laevigata	RLG00000009242
rosa_multiflora	Rmu_sc0005299.1_g000011 Rmu_sc0028740.1_g000001
rosa_roxburghii	Rroxscaffold_5G00344690
rosa_rugosa	Rorug04G0018500 Rorug04G0018600 Rorug04G0018700
rosa_samantha	Rh4AG096300 Rh4BG093700 Rh4CG105200 Rh4DG090100
rosa_wichuraiana	Rw4G007960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	530, 2078
AasI	GACNNNNNNGTC	1 cut(s)	957
AccIII	TCCGGA	1 cut(s)	621
AciI	CCGC	4 cut(s)	1116, 1247, 1919, 2051
AclWI	GGATC	8 cut(s)	134, 234, 773, 1679, 1749, 1929, 2243, 2261
AcoI	YGGCCR	3 cut(s)	154, 674, 1012
AcsI	RAATTY	4 cut(s)	993, 1019, 1679, 1701
AcuI	CTGAAG	1 cut(s)	1461
AcyI	GRCGYC	1 cut(s)	1835
AfaI	GTAC	4 cut(s)	775, 803, 811, 1439
AfiI	CCNNNNNNNGG	7 cut(s)	223, 672, 683, 941, 1165, 1403, 1918
AflIII	ACRYGT	1 cut(s)	812
AgeI	ACCGGT	1 cut(s)	80
AgsI	TTSAA	8 cut(s)	190, 206, 263, 277, 377, 1210, 1573, 1804
AhlI	ACTAGT	1 cut(s)	416
AjiI	CACGTC	2 cut(s)	432, 2287
AjnI	CCWGG	9 cut(s)	222, 1396, 1669, 1705, 1860, 1948, 1970, 2169, 2269
AjuI	GAANNNNNNNTTGG	2 cut(s)	827, 859
AleI	CACNNNNGTG	1 cut(s)	386
Alw21I	GWGCWC	1 cut(s)	586
Alw26I	GTCTC	3 cut(s)	175, 1504, 1612
AlwI	GGATC	8 cut(s)	134, 234, 773, 1679, 1749, 1929, 2243, 2261
Ama87I	CYCGRG	2 cut(s)	733, 1881
Aor13HI	TCCGGA	1 cut(s)	621
AoxI	GGCC	6 cut(s)	154, 674, 788, 1012, 1169, 2162
ApoI	RAATTY	4 cut(s)	993, 1019, 1679, 1701
ArsI	GACNNNNNNTTYG	2 cut(s)	1189, 1221
AsiGI	ACCGGT	1 cut(s)	80
Asp700I	GAANNNNTTC	1 cut(s)	842
AspS9I	GGNCC	8 cut(s)	124, 495, 619, 788, 1169, 1283, 1886, 1974
AsuC2I	CCSGG	2 cut(s)	588, 2153
AsuHPI	GGTGA	6 cut(s)	28, 40, 206, 371, 956, 1404
AvaI	CYCGRG	2 cut(s)	733, 1881
AvaII	GGWCC	6 cut(s)	124, 495, 619, 1283, 1886, 1974
BalI	TGGCCA	3 cut(s)	156, 676, 1014
BanII	GRGCYC	2 cut(s)	871, 2105
BauI	CACGAG	1 cut(s)	103
Bbv12I	GWGCWC	1 cut(s)	586
BccI	CCATC	8 cut(s)	362, 935, 941, 1033, 1133, 1423, 1820, 2120
BciT130I	CCWGG	9 cut(s)	224, 1398, 1671, 1707, 1862, 1950, 1972, 2171, 2271
BclI	TGATCA	1 cut(s)	1123
BcnI	CCSGG	2 cut(s)	588, 2153
BcoDI	GTCTC	3 cut(s)	175, 1504, 1612
BcuI	ACTAGT	1 cut(s)	416
BfaI	CTAG	4 cut(s)	417, 1620, 1943, 2264
BfmI	CTRYAG	4 cut(s)	511, 966, 1809, 2145
BglII	AGATCT	1 cut(s)	107
BmcAI	AGTACT	1 cut(s)	775
Bme18I	GGWCC	6 cut(s)	124, 495, 619, 1283, 1886, 1974
BmeT110I	CYCGRG	2 cut(s)	733, 1881
BmgBI	CACGTC	2 cut(s)	432, 2287
BmgT120I	GGNCC	8 cut(s)	124, 495, 619, 788, 1169, 1283, 1886, 1974
BmiI	GGNNCC	8 cut(s)	496, 868, 1044, 1170, 1675, 1888, 1976, 2102
BmrI	ACTGGG	1 cut(s)	765
BmsI	GCATC	5 cut(s)	24, 532, 1210, 1601, 1906
BmuI	ACTGGG	1 cut(s)	765
BplI	GAGNNNNNCTC	2 cut(s)	2203, 2235
BpmI	CTGGAG	3 cut(s)	723, 1167, 2153
Bpu10I	CCTNAGC	1 cut(s)	558
BpuEI	CTTGAG	1 cut(s)	470
BpuMI	CCSGG	2 cut(s)	588, 2153
BsaBI	GATNNNNATC	2 cut(s)	1715, 1920
BsaHI	GRCGYC	1 cut(s)	1835
BsaI	GGTCTC	1 cut(s)	1504
BsaJI	CCNNGG	6 cut(s)	600, 1316, 1669, 1706, 1860, 2252
BsaWI	WCCGGW	4 cut(s)	80, 621, 665, 1350
BsaXI	ACNNNNNCTCC	4 cut(s)	1083, 1113, 1748, 1778
Bsc4I	CCNNNNNNNGG	7 cut(s)	223, 672, 683, 941, 1165, 1403, 1918
Bse118I	RCCGGY	2 cut(s)	37, 80
Bse1I	ACTGG	4 cut(s)	771, 914, 1449, 1789
Bse3DI	GCAATG	1 cut(s)	165
Bse8I	GATNNNNATC	2 cut(s)	1715, 1920
BseAI	TCCGGA	1 cut(s)	621
BseBI	CCWGG	9 cut(s)	224, 1398, 1671, 1707, 1862, 1950, 1972, 2171, 2271
BseDI	CCNNGG	6 cut(s)	600, 1316, 1669, 1706, 1860, 2252
BseGI	GGATG	6 cut(s)	751, 946, 1044, 1423, 1831, 2120
BseJI	GATNNNNATC	2 cut(s)	1715, 1920
BseLI	CCNNNNNNNGG	7 cut(s)	223, 672, 683, 941, 1165, 1403, 1918
BseMI	GCAATG	1 cut(s)	165
BseMII	CTCAG	6 cut(s)	123, 162, 279, 549, 1145, 1512
BseNI	ACTGG	4 cut(s)	771, 914, 1449, 1789
BseYI	CCCAGC	1 cut(s)	899
BsgI	GTGCAG	1 cut(s)	2031
BshFI	GGCC	6 cut(s)	156, 676, 790, 1014, 1171, 2164
BshTI	ACCGGT	1 cut(s)	80
BsiHKAI	GWGCWC	1 cut(s)	586
BsiHKCI	CYCGRG	2 cut(s)	733, 1881
BsiSI	CCGG	7 cut(s)	38, 81, 587, 622, 666, 1351, 2152
BsiWI	CGTACG	1 cut(s)	1437
BslFI	GGGAC	2 cut(s)	508, 1960
BslI	CCNNNNNNNGG	7 cut(s)	223, 672, 683, 941, 1165, 1403, 1918
BsmAI	GTCTC	3 cut(s)	175, 1504, 1612
BsmBI	CGTCTC	1 cut(s)	175
BsmFI	GGGAC	2 cut(s)	508, 1960
BsmI	GAATGC	5 cut(s)	41, 119, 212, 483, 1011
BsnI	GGCC	6 cut(s)	156, 676, 790, 1014, 1171, 2164
Bso31I	GGTCTC	1 cut(s)	1504
BsoBI	CYCGRG	2 cut(s)	733, 1881
Bsp1286I	GDGCHC	3 cut(s)	586, 871, 2105
Bsp13I	TCCGGA	1 cut(s)	621
BspACI	CCGC	4 cut(s)	1116, 1247, 1919, 2051
BspANI	GGCC	6 cut(s)	156, 676, 790, 1014, 1171, 2164
BspCNI	CTCAG	6 cut(s)	124, 163, 280, 550, 1146, 1511
BspEI	TCCGGA	1 cut(s)	621
BspHI	TCATGA	1 cut(s)	177
BspLI	GGNNCC	8 cut(s)	496, 868, 1044, 1170, 1675, 1888, 1976, 2102
BspMAI	CTGCAG	1 cut(s)	970
BspPI	GGATC	8 cut(s)	134, 234, 773, 1679, 1749, 1929, 2243, 2261
BspQI	GCTCTTC	1 cut(s)	833
BspTNI	GGTCTC	1 cut(s)	1504
BsrDI	GCAATG	1 cut(s)	165
BsrFI	RCCGGY	2 cut(s)	37, 80
BsrI	ACTGG	4 cut(s)	771, 914, 1449, 1789
BssAI	RCCGGY	2 cut(s)	37, 80
BssECI	CCNNGG	6 cut(s)	600, 1316, 1669, 1706, 1860, 2252
BssNI	GRCGYC	1 cut(s)	1835
BssSI	CACGAG	1 cut(s)	103
BssT1I	CCWWGG	2 cut(s)	1316, 2252
Bst2BI	CACGAG	1 cut(s)	103
Bst2UI	CCWGG	9 cut(s)	224, 1398, 1671, 1707, 1862, 1950, 1972, 2171, 2271
Bst4CI	ACNGT	4 cut(s)	16, 328, 648, 1178
Bst6I	CTCTTC	1 cut(s)	833
BstACI	GRCGYC	1 cut(s)	1835
BstAPI	GCANNNNNTGC	3 cut(s)	974, 1448, 2066
BstC8I	GCNNGC	5 cut(s)	39, 564, 582, 766, 1585
BstDEI	CTNAG	6 cut(s)	132, 171, 288, 558, 1154, 1498
BstDSI	CCRYGG	1 cut(s)	600
BstF5I	GGATG	6 cut(s)	751, 946, 1044, 1423, 1831, 2120
BstMAI	GTCTC	3 cut(s)	175, 1504, 1612
BstNI	CCWGG	9 cut(s)	224, 1398, 1671, 1707, 1862, 1950, 1972, 2171, 2271
BstNSI	RCATGY	1 cut(s)	816
BstSFI	CTRYAG	4 cut(s)	511, 966, 1809, 2145
BstX2I	RGATCY	5 cut(s)	107, 226, 1741, 1921, 2266
BstXI	CCANNNNNNTGG	2 cut(s)	388, 1022
BstYI	RGATCY	5 cut(s)	107, 226, 1741, 1921, 2266
BsuRI	GGCC	6 cut(s)	156, 676, 790, 1014, 1171, 2164
BtgI	CCRYGG	1 cut(s)	600
BtrI	CACGTC	2 cut(s)	432, 2287
BtsCI	GGATG	6 cut(s)	751, 946, 1044, 1423, 1831, 2120
BtsI	GCAGTG	2 cut(s)	381, 963
BtsIMutI	CAGTG	4 cut(s)	381, 963, 1442, 1719
Cac8I	GCNNGC	5 cut(s)	39, 564, 582, 766, 1585
CciI	TCATGA	1 cut(s)	177
Cfr10I	RCCGGY	2 cut(s)	37, 80
Cfr13I	GGNCC	8 cut(s)	124, 495, 619, 788, 1169, 1283, 1886, 1974
CseI	GACGC	2 cut(s)	192, 1843
Csp6I	GTAC	4 cut(s)	774, 802, 810, 1438
CspAI	ACCGGT	1 cut(s)	80
CspCI	CAANNNNNGTGG	4 cut(s)	233, 268, 1015, 1050
CviAII	CATG	8 cut(s)	178, 461, 813, 953, 1010, 1016, 2023, 2243
CviQI	GTAC	4 cut(s)	774, 802, 810, 1438
DdeI	CTNAG	6 cut(s)	132, 171, 288, 558, 1154, 1498
DraI	TTTAAA	1 cut(s)	1524
DrdI	GACNNNNNNGTC	1 cut(s)	957
DseDI	GACNNNNNNGTC	1 cut(s)	957
EaeI	YGGCCR	3 cut(s)	154, 674, 1012
Eam1104I	CTCTTC	1 cut(s)	833
EarI	CTCTTC	1 cut(s)	833
Eco130I	CCWWGG	2 cut(s)	1316, 2252
Eco147I	AGGCCT	1 cut(s)	2164
Eco24I	GRGCYC	2 cut(s)	871, 2105
Eco31I	GGTCTC	1 cut(s)	1504
Eco47I	GGWCC	6 cut(s)	124, 495, 619, 1283, 1886, 1974
Eco57I	CTGAAG	1 cut(s)	1461
Eco88I	CYCGRG	2 cut(s)	733, 1881
EcoO109I	RGGNCCY	3 cut(s)	495, 1283, 1886
EcoRI	GAATTC	2 cut(s)	993, 1701
EcoRII	CCWGG	9 cut(s)	222, 1396, 1669, 1705, 1860, 1948, 1970, 2169, 2269
EcoT14I	CCWWGG	2 cut(s)	1316, 2252
EcoT22I	ATGCAT	1 cut(s)	1011
EcoT38I	GRGCYC	2 cut(s)	871, 2105
ErhI	CCWWGG	2 cut(s)	1316, 2252
Esp3I	CGTCTC	1 cut(s)	175
FaeI	CATG	8 cut(s)	181, 464, 816, 956, 1013, 1019, 2026, 2246
FalI	AAGNNNNNCTT	4 cut(s)	827, 859, 2108, 2140
FaqI	GGGAC	2 cut(s)	508, 1960
FatI	CATG	8 cut(s)	177, 460, 812, 952, 1009, 1015, 2022, 2242
FauI	CCCGC	1 cut(s)	1240
FbaI	TGATCA	1 cut(s)	1123
FokI	GGATG	6 cut(s)	738, 953, 1051, 1410, 1838, 2107
FriOI	GRGCYC	2 cut(s)	871, 2105
FspBI	CTAG	4 cut(s)	417, 1620, 1943, 2264
GsaI	CCCAGC	1 cut(s)	903
GsuI	CTGGAG	3 cut(s)	723, 1167, 2153
HaeIII	GGCC	6 cut(s)	156, 676, 790, 1014, 1171, 2164
HapII	CCGG	7 cut(s)	38, 81, 587, 622, 666, 1351, 2152
HgaI	GACGC	2 cut(s)	192, 1843
Hin1I	GRCGYC	1 cut(s)	1835
Hin1II	CATG	8 cut(s)	181, 464, 816, 956, 1013, 1019, 2026, 2246
HincII	GTYRAC	1 cut(s)	823
HindII	GTYRAC	1 cut(s)	823
HindIII	AAGCTT	1 cut(s)	757
HinfI	GANTC	4 cut(s)	392, 422, 731, 1472
HpaII	CCGG	7 cut(s)	38, 81, 587, 622, 666, 1351, 2152
HphI	GGTGA	6 cut(s)	28, 40, 206, 371, 956, 1404
Hpy166II	GTNNAC	2 cut(s)	730, 823
Hpy188I	TCNGA	9 cut(s)	112, 133, 397, 1004, 1293, 1501, 1612, 1959, 2188
Hpy188III	TCNNGA	8 cut(s)	178, 557, 622, 1600, 1698, 1773, 2031, 2264
Hpy8I	GTNNAC	2 cut(s)	730, 823
HpyAV	CCTTC	4 cut(s)	326, 610, 1704, 2154
HpyCH4III	ACNGT	4 cut(s)	16, 328, 648, 1178
HpyCH4IV	ACGT	3 cut(s)	431, 1436, 2286
HpyF3I	CTNAG	6 cut(s)	132, 171, 288, 558, 1154, 1498
HpySE526I	ACGT	3 cut(s)	431, 1436, 2286
Hsp92I	GRCGYC	1 cut(s)	1835
Hsp92II	CATG	8 cut(s)	181, 464, 816, 956, 1013, 1019, 2026, 2246
Kpn2I	TCCGGA	1 cut(s)	621
KroI	GCCGGC	1 cut(s)	37
KroNI	GCCGGC	1 cut(s)	39
Ksp22I	TGATCA	1 cut(s)	1123
LguI	GCTCTTC	1 cut(s)	833
LmnI	GCTCC	5 cut(s)	589, 866, 1048, 1951, 2100
LweI	GCATC	5 cut(s)	24, 532, 1210, 1601, 1906
MaeI	CTAG	4 cut(s)	417, 1620, 1943, 2264
MaeII	ACGT	3 cut(s)	431, 1436, 2286
MaeIII	GTNAC	5 cut(s)	322, 427, 848, 959, 1410
MboII	GAAGA	5 cut(s)	107, 850, 1467, 1544, 1916
MfeI	CAATTG	2 cut(s)	1119, 1635
MflI	RGATCY	5 cut(s)	107, 226, 1741, 1921, 2266
MhlI	GDGCHC	3 cut(s)	586, 871, 2105
MlsI	TGGCCA	3 cut(s)	156, 676, 1014
MluCI	AATT	9 cut(s)	993, 1019, 1056, 1119, 1573, 1635, 1679, 1701, 2064
MluNI	TGGCCA	3 cut(s)	156, 676, 1014
MlyI	GAGTC	1 cut(s)	725
MmeI	TCCRAC	1 cut(s)	686
Mox20I	TGGCCA	3 cut(s)	156, 676, 1014
Mph1103I	ATGCAT	1 cut(s)	1011
MroI	TCCGGA	1 cut(s)	621
MroNI	GCCGGC	1 cut(s)	37
MroXI	GAANNNNTTC	1 cut(s)	842
MscI	TGGCCA	3 cut(s)	156, 676, 1014
MseI	TTAA	6 cut(s)	909, 1523, 1728, 1794, 1896, 2202
MslI	CAYNNNNRTG	2 cut(s)	386, 1014
Msp20I	TGGCCA	3 cut(s)	156, 676, 1014
MspA1I	CMGCKG	4 cut(s)	899, 980, 1238, 1271
MspI	CCGG	7 cut(s)	38, 81, 587, 622, 666, 1351, 2152
MunI	CAATTG	2 cut(s)	1119, 1635
Mva1269I	GAATGC	5 cut(s)	41, 119, 212, 483, 1011
MvaI	CCWGG	9 cut(s)	224, 1398, 1671, 1707, 1862, 1950, 1972, 2171, 2271
NaeI	GCCGGC	1 cut(s)	39
NciI	CCSGG	2 cut(s)	588, 2153
NgoMIV	GCCGGC	1 cut(s)	37
NlaIII	CATG	8 cut(s)	181, 464, 816, 956, 1013, 1019, 2026, 2246
NlaIV	GGNNCC	8 cut(s)	496, 868, 1044, 1170, 1675, 1888, 1976, 2102
NmuCI	GTSAC	4 cut(s)	322, 427, 959, 1410
NsiI	ATGCAT	1 cut(s)	1011
NspI	RCATGY	1 cut(s)	816
OliI	CACNNNNGTG	1 cut(s)	386
PaeR7I	CTCGAG	1 cut(s)	1881
PagI	TCATGA	1 cut(s)	177
PceI	AGGCCT	1 cut(s)	2164
PciI	ACATGT	1 cut(s)	812
PciSI	GCTCTTC	1 cut(s)	833
PctI	GAATGC	5 cut(s)	41, 119, 212, 483, 1011
PdiI	GCCGGC	1 cut(s)	39
PdmI	GAANNNNTTC	1 cut(s)	842
PfeI	GAWTC	3 cut(s)	392, 422, 1472
Pfl23II	CGTACG	1 cut(s)	1437
PfoI	TCCNGGA	2 cut(s)	222, 2269
PinAI	ACCGGT	1 cut(s)	80
PleI	GAGTC	1 cut(s)	725
PpsI	GAGTC	1 cut(s)	725
PpuMI	RGGWCCY	3 cut(s)	495, 1283, 1886
PscI	ACATGT	1 cut(s)	812
PsiI	TTATAA	2 cut(s)	530, 2078
Psp5II	RGGWCCY	3 cut(s)	495, 1283, 1886
Psp6I	CCWGG	9 cut(s)	222, 1396, 1669, 1705, 1860, 1948, 1970, 2169, 2269
PspFI	CCCAGC	1 cut(s)	899
PspGI	CCWGG	9 cut(s)	222, 1396, 1669, 1705, 1860, 1948, 1970, 2169, 2269
PspLI	CGTACG	1 cut(s)	1437
PspN4I	GGNNCC	8 cut(s)	496, 868, 1044, 1170, 1675, 1888, 1976, 2102
PspPI	GGNCC	8 cut(s)	124, 495, 619, 788, 1169, 1283, 1886, 1974
PspPPI	RGGWCCY	3 cut(s)	495, 1283, 1886
PspXI	VCTCGAGB	1 cut(s)	1881
PstI	CTGCAG	1 cut(s)	970
PsuI	RGATCY	5 cut(s)	107, 226, 1741, 1921, 2266
PvuII	CAGCTG	4 cut(s)	899, 980, 1238, 1271
RsaI	GTAC	4 cut(s)	775, 803, 811, 1439
RsaNI	GTAC	4 cut(s)	774, 802, 810, 1438
RseI	CAYNNNNRTG	2 cut(s)	386, 1014
SapI	GCTCTTC	1 cut(s)	833
SaqAI	TTAA	6 cut(s)	909, 1523, 1728, 1794, 1896, 2202
Sau96I	GGNCC	8 cut(s)	124, 495, 619, 788, 1169, 1283, 1886, 1974
ScaI	AGTACT	1 cut(s)	775
SchI	GAGTC	1 cut(s)	725
SduI	GDGCHC	3 cut(s)	586, 871, 2105
SfaNI	GCATC	5 cut(s)	24, 532, 1210, 1601, 1906
SfcI	CTRYAG	4 cut(s)	511, 966, 1809, 2145
Sfr274I	CTCGAG	1 cut(s)	1881
SinI	GGWCC	6 cut(s)	124, 495, 619, 1283, 1886, 1974
SlaI	CTCGAG	1 cut(s)	1881
SmiMI	CAYNNNNRTG	2 cut(s)	386, 1014
SmlI	CTYRAG	2 cut(s)	449, 1881
SmoI	CTYRAG	2 cut(s)	449, 1881
SpeI	ACTAGT	1 cut(s)	416
Sse9I	AATT	9 cut(s)	993, 1019, 1056, 1119, 1573, 1635, 1679, 1701, 2064
SseBI	AGGCCT	1 cut(s)	2164
SsiI	CCGC	4 cut(s)	1116, 1247, 1919, 2051
SspI	AATATT	5 cut(s)	712, 1392, 1549, 1872, 1894
SspMI	CTAG	4 cut(s)	417, 1620, 1943, 2264
StuI	AGGCCT	1 cut(s)	2164
StyI	CCWWGG	2 cut(s)	1316, 2252
TaaI	ACNGT	4 cut(s)	16, 328, 648, 1178
TaiI	ACGT	3 cut(s)	434, 1439, 2289
TaqI	TCGA	7 cut(s)	70, 330, 408, 442, 1432, 1789, 1882
TasI	AATT	9 cut(s)	993, 1019, 1056, 1119, 1573, 1635, 1679, 1701, 2064
TatI	WGTACW	2 cut(s)	773, 801
TauI	GCSGC	1 cut(s)	1118
TfiI	GAWTC	3 cut(s)	392, 422, 1472
Tru1I	TTAA	6 cut(s)	909, 1523, 1728, 1794, 1896, 2202
Tru9I	TTAA	6 cut(s)	909, 1523, 1728, 1794, 1896, 2202
TscAI	CASTG	4 cut(s)	388, 970, 1449, 1726
TseFI	GTSAC	4 cut(s)	322, 427, 959, 1410
Tsp45I	GTSAC	4 cut(s)	322, 427, 959, 1410
TspDTI	ATGAA	3 cut(s)	414, 536, 1032
TspGWI	ACGGA	2 cut(s)	589, 867
TspRI	CASTG	4 cut(s)	388, 970, 1449, 1726
VpaK11BI	GGWCC	6 cut(s)	124, 495, 619, 1283, 1886, 1974
XapI	RAATTY	4 cut(s)	993, 1019, 1679, 1701
XbaI	TCTAGA	1 cut(s)	2263
XceI	RCATGY	1 cut(s)	816
XcmI	CCANNNNNNNNNTGG	2 cut(s)	669, 1373
XhoI	CTCGAG	1 cut(s)	1881
XmnI	GAANNNNTTC	1 cut(s)	842
XspI	CTAG	4 cut(s)	417, 1620, 1943, 2264
ZrmI	AGTACT	1 cut(s)	775
Zsp2I	ATGCAT	1 cut(s)	1011

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.