Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0002949

Physical Location & Seq

Genomic Coordinates Forward (+)

17043205 .. 17050639

Gene Structure 7435 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G007960.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2430 bp

ATGGTAAAACTGAGGGCTATGGAGTTTTGGTATGCCGTTTTCGTATTGTTTTCCCTTTTCGTTATTGGGAAGGCTGATGTTTATATTGTGACTGTCGAAGGAGAGCCTATTGTAAGTTATAGAGGTGATGTTGATGGTTTTGAAGCCACTGCTGTGGAATCTGATGAAAAGATCGACACCACTAGTGAATCAGTCACGTCCTATGCTCGACACCTTGAGAATAAACATGATATGCTTCTTGGAATGCTCTATCAGCATCTTATAAATGGCTTTGCAGTTCATATTTCTCCTGAGCAGGCAGAAAGACTAATGCGTGCTCCGGGTGTGAAATCCGTGGAGAGAGATTGGAAGGTCCGGAGGCTTACAACTCACACACCACAGTTTTTAGGGCTTCCAACCGGAGTATGGCCAACAGGAGGTGGCTTTGATAGGGCTGGAGAAAATATTGTGATAGGGTTTGTGGACTCGGGGATTTACCCTCATCATCCAAGCTTTGCAAGCCCCAGTACTGATCCTTACGGGCCTGTTCCCAAGTACAGAGGTACATGTGAAGTTGACCCAGACACCAAGAAGAGCTTCTGTAACGGAAAGATTATTGGAGCCCACCATTTCGCCAAAGCTGCAATAGCAGCTGGGGTGTTTAATCCAGTTATTGATTTCGCCTCTCCTATGGATGGTGATGGACATGGAAGTCACACTGCAGCTATTGCAGCCGGAAACAATGGAATTCCTGTCAGAATGCATGGCCATGAATTTGGCAAAGCAAGTGGGATGGCTCCCCGTGCCAGAATTGCTGTATATAAAGCTCTTTACAGGCTCTTTGGAGGGTTTGTAGCAGATGTAGTAGCCGCAATTGATCAGGCTGTTTATGATGGAGTGGATATACTGAGCCTTTCTGTGGGGCCAAACAGTCCTCCAGCTACCACCAAGACCACTTATTTGAACCCGTTTGATGCCACACTTCTTTCAGCTGTGAAAGCAGGTGTATTTGTTGCACAGGCAGCTGGAAATGGAGGACCTTTTCCGAAAACTTTGGTTTCTTATAGCCCTTGGATAGCTTCTGTTGCTGCTGCCATAGATGACCGGAGATACAAAAACCATTTCACGCTTGGGAATGGAAAAATATTACCTGGACTTGGGTTGTCACCATCTACACAACCAAATCGAACGTACGCACTGGTTGCTGCAAATGATGTGCTTTTGGATTCTTCAGTAGTGAAGTATAGCCCCTCAGACTGCCAGAGACCAGAAGTTTTAAACAAGAACTTGGTTGAGGGGAATATTCTTCTTTGTGGCTATTCGTTCAATTTTGTTGCTGGCTCTGCATCAATCAAGAAAGTCTCGGAAACAGCTAAAAGTCTTGGTGCAATTGGCTTTGTTCTCGCTGTGGAAAATGTTTCCCCAGGAACCAAATTTGATCCTGTTCCTTCTGGAATTCCTGGGATTGTAATCACTGATGTTAAGAAGTCAATGGATCTTATAGATTACTACAACATCTCCACATCAAGAGATTGGACTGGTCGAGTTAAGAGTTTCAAAGCTATAGGTAGCATTGGGGATGGTTTGACGCCTATACTCCATAAATCAGCACCCCAGGTGGCAATATTCTCTGCTCGAGGACCCAATATTAAAGATTTCAGCTTCCAAGATGCGGATCTTCTCAAACCAGATATTCTAGCTCCTGGTTCTCTGATTTGGGCTGCCTGGTCCCCTAATGGAACAGATGAGCCTGATTATGTTGGGGAGGGATTTGCCATGATTTCTGGAACAAGTATGGCTGCACCGCATATAGCAGGAATAGCTGCTCTTATAAAGCAGAAGCACCCTCATTGGAGCCCTGCTGCCATCAAGTCATCCTTGATGACAACATCAACAACTATAGACCGGGCTGGAAGGCCTCTCCAGGCACAACAGACTTCCGAAACACAAGGCATTAAGTTTGTGAGTGCTACTCCTTTTGATTATGGTAGTGGTCATGTTGATCCAAGGGCTGCTCTAGATCCTGGACTAATCTTTGACGTGGGTTTTGAGGATTACTTGGGCTTCTTGTGTACAACACCTGGTATTGATGCCCATGAGATAAAGAAATACACAAACTCCCCCTGCAATTACACCATGGGCCACCCATCAAATTTCAACTCTCCGTCAATCACAGTATCTCATCTTGTAGGAAGTCGTACAGTTACTCGCACAGTGACAAATGTTGCTCAAGAAGAAACCTATGTGATCACAGCCAGAATGGCTCCAGCAATTGCCATTAGTGTCAGCCCTCCAGCAATGACTCTGAAACCTGGTGCTTCTAGAAAGTTCTCTGTGAGTCTCACAGCTCGACGTTTGACTGGAACCTACAGTTTTGGAGAGGTTCTGTTGAAAGGTAGCCGGGGGCACAAGGTTAGGATCCCGGTGGTAGCTATGGGTTACCGACGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0016787 GO:0017171 GO:0019538 GO:0043170 GO:0044238 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8 fn3_5

Protein Analysis

809

Amino Acids

86.53

Weight (kDa)

8.57

Isoelectric Point (pI)

29.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	27 - 119	9.2e-11	Peptidase inhibitor I9
Peptidase_S8	PF00082	146 - 632	2e-40	Subtilase family
fn3_5	PF06280	706 - 803	3e-17	Fn3-like domain
fn3_6	PF17766	711 - 803	2.4e-18	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002949)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19170 AT2G19170 AT4G30020 AT4G30020 AT4G30020 AT4G30020
fragaria_vesca	FvH4_4g07370 FvH4_4g07370 FvH4_4g07370 FvH4_4g07370 FvH4_4g07370 FvH4_4g07370 FvH4_4g07370 FvH4_4g07370 FvH4_4g07370
malus_domestica	MD13G1242900.v1.1 MD16G1249700.v1.1
prunus_persica	Prupe.1G076600_v2.0.a1 Prupe.1G076600_v2.0.a1 Prupe.1G076600_v2.0.a1 Prupe.1G076600_v2.0.a1
pyrus_communis	pycom13g21460 pycom16g20920 pycom16g20930
rosa_chinensis	RchiOBHm_Chr4g0399741 RchiOBHm_Chr4g0399751
rosa_laevigata	RLG00000009242
rosa_multiflora	Rmu_sc0005299.1_g000011 Rmu_sc0028740.1_g000001
rosa_roxburghii	Rroxscaffold_5G00344690
rosa_rugosa	Rorug04G0018500 Rorug04G0018600 Rorug04G0018700
rosa_samantha	Rh4AG096300 Rh4BG093700 Rh4CG105200 Rh4DG090100
rosa_wichuraiana	Rw4G007960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	263, 1811
AarI	CACCTGC	1 cut(s)	971
AasI	GACNNNNNNGTC	1 cut(s)	690
Acc36I	ACCTGC	1 cut(s)	971
AccIII	TCCGGA	1 cut(s)	354
AciI	CCGC	3 cut(s)	849, 1652, 1784
AclWI	GGATC	8 cut(s)	506, 1412, 1482, 1662, 1976, 1994, 2392, 2405
AcoI	YGGCCR	2 cut(s)	407, 745
AcsI	RAATTY	5 cut(s)	726, 752, 1412, 1434, 2131
AcuI	CTGAAG	1 cut(s)	1194
AcyI	GRCGYC	1 cut(s)	1568
AfaI	GTAC	6 cut(s)	508, 536, 544, 1172, 2053, 2179
AfiI	CCNNNNNNNGG	6 cut(s)	405, 416, 674, 898, 1136, 1651
AflIII	ACRYGT	1 cut(s)	545
AgsI	TTSAA	6 cut(s)	143, 943, 1306, 1537, 2137, 2371
AhlI	ACTAGT	1 cut(s)	182
AjiI	CACGTC	2 cut(s)	198, 2020
AjuI	GAANNNNNNNTTGG	2 cut(s)	560, 592
AleI	CACNNNNGTG	1 cut(s)	152
Alw21I	GWGCWC	1 cut(s)	319
Alw26I	GTCTC	3 cut(s)	1237, 1345, 2324
AlwI	GGATC	8 cut(s)	506, 1412, 1482, 1662, 1976, 1994, 2392, 2405
Ama87I	CYCGRG	2 cut(s)	466, 1614
Aor13HI	TCCGGA	1 cut(s)	354
AoxI	GGCC	6 cut(s)	407, 521, 745, 902, 1895, 2119
ApoI	RAATTY	5 cut(s)	726, 752, 1412, 1434, 2131
ArsI	GACNNNNNNTTYG	4 cut(s)	922, 954, 2009, 2041
Asp700I	GAANNNNTTC	1 cut(s)	575
AspS9I	GGNCC	7 cut(s)	352, 521, 902, 1016, 1619, 1707, 2119
AsuC2I	CCSGG	4 cut(s)	321, 1886, 2381, 2402
AsuHPI	GGTGA	3 cut(s)	137, 689, 1137
AvaI	CYCGRG	2 cut(s)	466, 1614
AvaII	GGWCC	4 cut(s)	352, 1016, 1619, 1707
BaeGI	GKGCMC	1 cut(s)	2388
BalI	TGGCCA	2 cut(s)	409, 747
BamHI	GGATCC	1 cut(s)	2397
BanII	GRGCYC	2 cut(s)	604, 1838
Bbv12I	GWGCWC	1 cut(s)	319
BccI	CCATC	9 cut(s)	128, 668, 674, 766, 866, 1156, 1553, 1853, 2134
BceAI	ACGGC	1 cut(s)	20
BclI	TGATCA	2 cut(s)	856, 2226
BcnI	CCSGG	4 cut(s)	321, 1886, 2381, 2402
BcoDI	GTCTC	3 cut(s)	1237, 1345, 2324
BcuI	ACTAGT	1 cut(s)	182
BfaI	CTAG	4 cut(s)	183, 1676, 1997, 2301
BfmI	CTRYAG	4 cut(s)	699, 1542, 1878, 2347
BfuAI	ACCTGC	1 cut(s)	971
BglI	GCCNNNNNGGC	1 cut(s)	2240
BmcAI	AGTACT	1 cut(s)	508
Bme18I	GGWCC	4 cut(s)	352, 1016, 1619, 1707
BmeT110I	CYCGRG	2 cut(s)	466, 1614
BmgBI	CACGTC	2 cut(s)	198, 2020
BmgT120I	GGNCC	7 cut(s)	352, 521, 902, 1016, 1619, 1707, 2119
BmrI	ACTGGG	1 cut(s)	498
BmsI	GCATC	5 cut(s)	265, 943, 1334, 1639, 2059
BmuI	ACTGGG	1 cut(s)	498
BplI	GAGNNNNNCTC	2 cut(s)	1936, 1968
BpmI	CTGGAG	5 cut(s)	456, 900, 1886, 2229, 2256
Bpu10I	CCTNAGC	1 cut(s)	291
BpuEI	CTTGAG	2 cut(s)	236, 2193
BpuMI	CCSGG	4 cut(s)	321, 1886, 2381, 2402
BsaBI	GATNNNNATC	2 cut(s)	1448, 1653
BsaHI	GRCGYC	1 cut(s)	1568
BsaI	GGTCTC	1 cut(s)	1237
BsaJI	CCNNGG	8 cut(s)	333, 1049, 1402, 1439, 1593, 1985, 2115, 2380
BsaWI	WCCGGW	3 cut(s)	354, 398, 1083
BsaXI	ACNNNNNCTCC	8 cut(s)	14, 44, 816, 846, 1481, 1511, 2081, 2111
Bsc4I	CCNNNNNNNGG	6 cut(s)	405, 416, 674, 898, 1136, 1651
Bse1I	ACTGG	5 cut(s)	504, 647, 1182, 1522, 2344
Bse3DI	GCAATG	1 cut(s)	2283
Bse8I	GATNNNNATC	2 cut(s)	1448, 1653
BseAI	TCCGGA	1 cut(s)	354
BseDI	CCNNGG	8 cut(s)	333, 1049, 1402, 1439, 1593, 1985, 2115, 2380
BseGI	GGATG	5 cut(s)	484, 679, 777, 1564, 1853
BseJI	GATNNNNATC	2 cut(s)	1448, 1653
BseLI	CCNNNNNNNGG	6 cut(s)	405, 416, 674, 898, 1136, 1651
BseMI	GCAATG	1 cut(s)	2283
BseMII	CTCAG	3 cut(s)	282, 878, 1245
BseNI	ACTGG	5 cut(s)	504, 647, 1182, 1522, 2344
BseSI	GKGCMC	1 cut(s)	2388
BseYI	CCCAGC	1 cut(s)	632
BsgI	GTGCAG	1 cut(s)	1764
BshFI	GGCC	6 cut(s)	409, 523, 747, 904, 1897, 2121
BsiHKAI	GWGCWC	1 cut(s)	319
BsiHKCI	CYCGRG	2 cut(s)	466, 1614
BsiSI	CCGG	8 cut(s)	320, 355, 399, 714, 1084, 1885, 2380, 2402
BsiWI	CGTACG	1 cut(s)	1170
BslFI	GGGAC	1 cut(s)	1693
BslI	CCNNNNNNNGG	6 cut(s)	405, 416, 674, 898, 1136, 1651
BsmAI	GTCTC	3 cut(s)	1237, 1345, 2324
BsmFI	GGGAC	1 cut(s)	1693
BsmI	GAATGC	2 cut(s)	249, 744
BsnI	GGCC	6 cut(s)	409, 523, 747, 904, 1897, 2121
Bso31I	GGTCTC	1 cut(s)	1237
BsoBI	CYCGRG	2 cut(s)	466, 1614
Bsp1286I	GDGCHC	4 cut(s)	319, 604, 1838, 2388
Bsp13I	TCCGGA	1 cut(s)	354
Bsp1407I	TGTACA	1 cut(s)	2051
Bsp19I	CCATGG	1 cut(s)	2115
BspACI	CCGC	3 cut(s)	849, 1652, 1784
BspANI	GGCC	6 cut(s)	409, 523, 747, 904, 1897, 2121
BspCNI	CTCAG	3 cut(s)	283, 879, 1244
BspEI	TCCGGA	1 cut(s)	354
BspMAI	CTGCAG	1 cut(s)	703
BspMI	ACCTGC	1 cut(s)	971
BspPI	GGATC	8 cut(s)	506, 1412, 1482, 1662, 1976, 1994, 2392, 2405
BspQI	GCTCTTC	1 cut(s)	566
BspTNI	GGTCTC	1 cut(s)	1237
BsrDI	GCAATG	1 cut(s)	2283
BsrGI	TGTACA	1 cut(s)	2051
BsrI	ACTGG	5 cut(s)	504, 647, 1182, 1522, 2344
BssECI	CCNNGG	8 cut(s)	333, 1049, 1402, 1439, 1593, 1985, 2115, 2380
BssNI	GRCGYC	1 cut(s)	1568
BssT1I	CCWWGG	3 cut(s)	1049, 1985, 2115
Bst4CI	ACNGT	8 cut(s)	94, 381, 911, 2155, 2182, 2194, 2351, 2427
Bst6I	CTCTTC	1 cut(s)	566
BstACI	GRCGYC	1 cut(s)	1568
BstAPI	GCANNNNNTGC	2 cut(s)	707, 1181
BstAUI	TGTACA	1 cut(s)	2051
BstC8I	GCNNGC	4 cut(s)	297, 315, 499, 1318
BstDEI	CTNAG	4 cut(s)	11, 291, 887, 1231
BstDSI	CCRYGG	2 cut(s)	333, 2115
BstEII	GGTNACC	1 cut(s)	2417
BstF5I	GGATG	5 cut(s)	484, 679, 777, 1564, 1853
BstMAI	GTCTC	3 cut(s)	1237, 1345, 2324
BstNSI	RCATGY	1 cut(s)	549
BstPI	GGTNACC	1 cut(s)	2417
BstSFI	CTRYAG	4 cut(s)	699, 1542, 1878, 2347
BstSLI	GKGCMC	1 cut(s)	2388
BstX2I	RGATCY	4 cut(s)	1474, 1654, 1999, 2397
BstXI	CCANNNNNNTGG	2 cut(s)	154, 755
BstYI	RGATCY	4 cut(s)	1474, 1654, 1999, 2397
BsuRI	GGCC	6 cut(s)	409, 523, 747, 904, 1897, 2121
BtgI	CCRYGG	2 cut(s)	333, 2115
BtrI	CACGTC	2 cut(s)	198, 2020
BtsCI	GGATG	5 cut(s)	484, 679, 777, 1564, 1853
BtsI	GCAGTG	2 cut(s)	147, 696
BtsIMutI	CAGTG	5 cut(s)	147, 696, 1175, 1452, 2199
BveI	ACCTGC	1 cut(s)	971
Cac8I	GCNNGC	4 cut(s)	297, 315, 499, 1318
Cfr13I	GGNCC	7 cut(s)	352, 521, 902, 1016, 1619, 1707, 2119
CseI	GACGC	1 cut(s)	1576
CsiI	ACCWGGT	2 cut(s)	2059, 2290
Csp6I	GTAC	6 cut(s)	507, 535, 543, 1171, 2052, 2178
CspCI	CAANNNNNGTGG	2 cut(s)	748, 783
CviAII	CATG	9 cut(s)	227, 546, 686, 743, 749, 1756, 1976, 2075, 2116
CviQI	GTAC	6 cut(s)	507, 535, 543, 1171, 2052, 2178
DdeI	CTNAG	4 cut(s)	11, 291, 887, 1231
DraI	TTTAAA	1 cut(s)	1257
DrdI	GACNNNNNNGTC	1 cut(s)	690
DseDI	GACNNNNNNGTC	1 cut(s)	690
EaeI	YGGCCR	2 cut(s)	407, 745
Eam1104I	CTCTTC	1 cut(s)	566
EarI	CTCTTC	1 cut(s)	566
Eco130I	CCWWGG	3 cut(s)	1049, 1985, 2115
Eco147I	AGGCCT	1 cut(s)	1897
Eco24I	GRGCYC	2 cut(s)	604, 1838
Eco31I	GGTCTC	1 cut(s)	1237
Eco47I	GGWCC	4 cut(s)	352, 1016, 1619, 1707
Eco57I	CTGAAG	1 cut(s)	1194
Eco88I	CYCGRG	2 cut(s)	466, 1614
Eco91I	GGTNACC	1 cut(s)	2417
EcoO109I	RGGNCCY	2 cut(s)	1016, 1619
EcoO65I	GGTNACC	1 cut(s)	2417
EcoRI	GAATTC	2 cut(s)	726, 1434
EcoT14I	CCWWGG	3 cut(s)	1049, 1985, 2115
EcoT22I	ATGCAT	1 cut(s)	744
EcoT38I	GRGCYC	2 cut(s)	604, 1838
ErhI	CCWWGG	3 cut(s)	1049, 1985, 2115
FaeI	CATG	9 cut(s)	230, 549, 689, 746, 752, 1759, 1979, 2078, 2119
FalI	AAGNNNNNCTT	4 cut(s)	560, 592, 1841, 1873
FaqI	GGGAC	1 cut(s)	1693
FatI	CATG	9 cut(s)	226, 545, 685, 742, 748, 1755, 1975, 2074, 2115
FbaI	TGATCA	2 cut(s)	856, 2226
FokI	GGATG	5 cut(s)	471, 686, 784, 1571, 1840
FriOI	GRGCYC	2 cut(s)	604, 1838
FspBI	CTAG	4 cut(s)	183, 1676, 1997, 2301
GsaI	CCCAGC	1 cut(s)	636
GsuI	CTGGAG	5 cut(s)	456, 900, 1886, 2229, 2256
HaeIII	GGCC	6 cut(s)	409, 523, 747, 904, 1897, 2121
HapII	CCGG	8 cut(s)	320, 355, 399, 714, 1084, 1885, 2380, 2402
HgaI	GACGC	1 cut(s)	1576
Hin1I	GRCGYC	1 cut(s)	1568
Hin1II	CATG	9 cut(s)	230, 549, 689, 746, 752, 1759, 1979, 2078, 2119
HincII	GTYRAC	1 cut(s)	556
HindII	GTYRAC	1 cut(s)	556
HindIII	AAGCTT	1 cut(s)	490
HinfI	GANTC	6 cut(s)	158, 188, 464, 1205, 2281, 2317
HpaII	CCGG	8 cut(s)	320, 355, 399, 714, 1084, 1885, 2380, 2402
HphI	GGTGA	3 cut(s)	137, 689, 1137
Hpy166II	GTNNAC	3 cut(s)	463, 556, 2052
Hpy188I	TCNGA	8 cut(s)	163, 737, 1026, 1234, 1345, 1692, 1921, 2286
Hpy188III	TCNNGA	9 cut(s)	290, 355, 1333, 1431, 1506, 1764, 1997, 2210, 2301
Hpy8I	GTNNAC	3 cut(s)	463, 556, 2052
Hpy99I	CGWCG	2 cut(s)	2334, 2427
HpyAV	CCTTC	5 cut(s)	64, 92, 343, 1437, 1887
HpyCH4III	ACNGT	8 cut(s)	94, 381, 911, 2155, 2182, 2194, 2351, 2427
HpyCH4IV	ACGT	4 cut(s)	197, 1169, 2019, 2332
HpyF3I	CTNAG	4 cut(s)	11, 291, 887, 1231
HpySE526I	ACGT	4 cut(s)	197, 1169, 2019, 2332
Hsp92I	GRCGYC	1 cut(s)	1568
Hsp92II	CATG	9 cut(s)	230, 549, 689, 746, 752, 1759, 1979, 2078, 2119
Kpn2I	TCCGGA	1 cut(s)	354
Ksp22I	TGATCA	2 cut(s)	856, 2226
LguI	GCTCTTC	1 cut(s)	566
LmnI	GCTCC	6 cut(s)	322, 599, 781, 1684, 1833, 2248
LweI	GCATC	5 cut(s)	265, 943, 1334, 1639, 2059
MabI	ACCWGGT	2 cut(s)	2059, 2290
MaeI	CTAG	4 cut(s)	183, 1676, 1997, 2301
MaeII	ACGT	4 cut(s)	197, 1169, 2019, 2332
MaeIII	GTNAC	8 cut(s)	88, 193, 581, 692, 1143, 2182, 2194, 2417
MboII	GAAGA	5 cut(s)	583, 1200, 1277, 1649, 2225
MfeI	CAATTG	3 cut(s)	852, 1368, 2250
MflI	RGATCY	4 cut(s)	1474, 1654, 1999, 2397
MhlI	GDGCHC	4 cut(s)	319, 604, 1838, 2388
MlsI	TGGCCA	2 cut(s)	409, 747
MluNI	TGGCCA	2 cut(s)	409, 747
MlyI	GAGTC	3 cut(s)	458, 2275, 2326
MmeI	TCCRAC	1 cut(s)	419
Mox20I	TGGCCA	2 cut(s)	409, 747
Mph1103I	ATGCAT	1 cut(s)	744
MroI	TCCGGA	1 cut(s)	354
MroXI	GAANNNNTTC	1 cut(s)	575
MscI	TGGCCA	2 cut(s)	409, 747
MseI	TTAA	6 cut(s)	642, 1256, 1461, 1527, 1629, 1935
MslI	CAYNNNNRTG	2 cut(s)	152, 747
Msp20I	TGGCCA	2 cut(s)	409, 747
MspA1I	CMGCKG	3 cut(s)	632, 971, 1004
MspI	CCGG	8 cut(s)	320, 355, 399, 714, 1084, 1885, 2380, 2402
MunI	CAATTG	3 cut(s)	852, 1368, 2250
Mva1269I	GAATGC	2 cut(s)	249, 744
NciI	CCSGG	4 cut(s)	321, 1886, 2381, 2402
NcoI	CCATGG	1 cut(s)	2115
NlaIII	CATG	9 cut(s)	230, 549, 689, 746, 752, 1759, 1979, 2078, 2119
NmuCI	GTSAC	5 cut(s)	88, 193, 692, 1143, 2194
NsiI	ATGCAT	1 cut(s)	744
NspI	RCATGY	1 cut(s)	549
OliI	CACNNNNGTG	1 cut(s)	152
PaeR7I	CTCGAG	1 cut(s)	1614
PaqCI	CACCTGC	1 cut(s)	971
PceI	AGGCCT	1 cut(s)	1897
PciI	ACATGT	1 cut(s)	545
PciSI	GCTCTTC	1 cut(s)	566
PctI	GAATGC	2 cut(s)	249, 744
PdmI	GAANNNNTTC	1 cut(s)	575
PfeI	GAWTC	3 cut(s)	158, 188, 1205
Pfl23II	CGTACG	1 cut(s)	1170
PfoI	TCCNGGA	1 cut(s)	2002
PleI	GAGTC	3 cut(s)	458, 2275, 2325
PpsI	GAGTC	3 cut(s)	458, 2275, 2325
PpuMI	RGGWCCY	2 cut(s)	1016, 1619
PscI	ACATGT	1 cut(s)	545
PsiI	TTATAA	2 cut(s)	263, 1811
Psp5II	RGGWCCY	2 cut(s)	1016, 1619
PspEI	GGTNACC	1 cut(s)	2417
PspFI	CCCAGC	1 cut(s)	632
PspLI	CGTACG	1 cut(s)	1170
PspPI	GGNCC	7 cut(s)	352, 521, 902, 1016, 1619, 1707, 2119
PspPPI	RGGWCCY	2 cut(s)	1016, 1619
PspXI	VCTCGAGB	1 cut(s)	1614
PstI	CTGCAG	1 cut(s)	703
PsuI	RGATCY	4 cut(s)	1474, 1654, 1999, 2397
PvuII	CAGCTG	3 cut(s)	632, 971, 1004
RsaI	GTAC	6 cut(s)	508, 536, 544, 1172, 2053, 2179
RsaNI	GTAC	6 cut(s)	507, 535, 543, 1171, 2052, 2178
RseI	CAYNNNNRTG	2 cut(s)	152, 747
SapI	GCTCTTC	1 cut(s)	566
SaqAI	TTAA	6 cut(s)	642, 1256, 1461, 1527, 1629, 1935
Sau96I	GGNCC	7 cut(s)	352, 521, 902, 1016, 1619, 1707, 2119
ScaI	AGTACT	1 cut(s)	508
SchI	GAGTC	3 cut(s)	458, 2275, 2326
SduI	GDGCHC	4 cut(s)	319, 604, 1838, 2388
SexAI	ACCWGGT	2 cut(s)	2059, 2290
SfaNI	GCATC	5 cut(s)	265, 943, 1334, 1639, 2059
SfcI	CTRYAG	4 cut(s)	699, 1542, 1878, 2347
Sfr274I	CTCGAG	1 cut(s)	1614
SinI	GGWCC	4 cut(s)	352, 1016, 1619, 1707
SlaI	CTCGAG	1 cut(s)	1614
SmiMI	CAYNNNNRTG	2 cut(s)	152, 747
SmlI	CTYRAG	3 cut(s)	215, 1614, 2208
SmoI	CTYRAG	3 cut(s)	215, 1614, 2208
SpeI	ACTAGT	1 cut(s)	182
SseBI	AGGCCT	1 cut(s)	1897
SsiI	CCGC	3 cut(s)	849, 1652, 1784
SspI	AATATT	5 cut(s)	445, 1125, 1282, 1605, 1627
SspMI	CTAG	4 cut(s)	183, 1676, 1997, 2301
StuI	AGGCCT	1 cut(s)	1897
StyI	CCWWGG	3 cut(s)	1049, 1985, 2115
TaaI	ACNGT	8 cut(s)	94, 381, 911, 2155, 2182, 2194, 2351, 2427
TaiI	ACGT	4 cut(s)	200, 1172, 2022, 2335
TaqI	TCGA	7 cut(s)	96, 174, 208, 1165, 1522, 1615, 2329
TatI	WGTACW	3 cut(s)	506, 534, 2051
TauI	GCSGC	1 cut(s)	851
TfiI	GAWTC	3 cut(s)	158, 188, 1205
Tru1I	TTAA	6 cut(s)	642, 1256, 1461, 1527, 1629, 1935
Tru9I	TTAA	6 cut(s)	642, 1256, 1461, 1527, 1629, 1935
TscAI	CASTG	5 cut(s)	154, 703, 1182, 1459, 2199
TseFI	GTSAC	5 cut(s)	88, 193, 692, 1143, 2194
Tsp45I	GTSAC	5 cut(s)	88, 193, 692, 1143, 2194
TspDTI	ATGAA	3 cut(s)	180, 269, 765
TspGWI	ACGGA	3 cut(s)	322, 600, 2133
TspRI	CASTG	5 cut(s)	154, 703, 1182, 1459, 2199
VpaK11BI	GGWCC	4 cut(s)	352, 1016, 1619, 1707
XapI	RAATTY	5 cut(s)	726, 752, 1412, 1434, 2131
XbaI	TCTAGA	2 cut(s)	1996, 2300
XceI	RCATGY	1 cut(s)	549
XcmI	CCANNNNNNNNNTGG	2 cut(s)	402, 1106
XhoI	CTCGAG	1 cut(s)	1614
XmnI	GAANNNNTTC	1 cut(s)	575
XspI	CTAG	4 cut(s)	183, 1676, 1997, 2301
ZrmI	AGTACT	1 cut(s)	508
Zsp2I	ATGCAT	1 cut(s)	744

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.