ubiquitin-protein transferase activity
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD12G1012300.v1.1 MD12G1012400.v1.1 MD14G1010100.v1.1 MD14G1010200.v1.1 |
| prunus_persica | Prupe.7G016200_v2.0.a1 Prupe.7G016300_v2.0.a1 |
| pyrus_communis | pycom12g00970 pycom12g00980 pycom14g00850 pycom14g00860 |
| rosa_chinensis | RchiOBHm_Chr3g0495961 |
| rosa_laevigata | RLG00000022576 |
| rosa_roxburghii | Rroxscaffold_6G00389740 |
| rosa_rugosa | Rorug03G0278000 |
| rosa_samantha | Rh3AG325300 Rh3BG361800 Rh3CG357800 Rh3DG361100 |
| rosa_wichuraiana | Rw3G028440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 397 |
| AclWI | GGATC | 3 cut(s) | 180, 411, 446 |
| AcsI | RAATTY | 2 cut(s) | 346, 471 |
| AcuI | CTGAAG | 1 cut(s) | 26 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 373 |
| AflIII | ACRYGT | 1 cut(s) | 106 |
| AgsI | TTSAA | 2 cut(s) | 59, 194 |
| AjnI | CCWGG | 1 cut(s) | 463 |
| AlwI | GGATC | 3 cut(s) | 180, 411, 446 |
| ApoI | RAATTY | 2 cut(s) | 346, 471 |
| AseI | ATTAAT | 1 cut(s) | 81 |
| AspLEI | GCGC | 1 cut(s) | 223 |
| BbsI | GAAGAC | 1 cut(s) | 336 |
| BccI | CCATC | 2 cut(s) | 136, 394 |
| BciT130I | CCWGG | 1 cut(s) | 465 |
| BfmI | CTRYAG | 1 cut(s) | 291 |
| Bme1390I | CCNGG | 1 cut(s) | 465 |
| BmrFI | CCNGG | 1 cut(s) | 465 |
| BpiI | GAAGAC | 1 cut(s) | 336 |
| BpuEI | CTTGAG | 1 cut(s) | 153 |
| BsaJI | CCNNGG | 1 cut(s) | 463 |
| BsaWI | WCCGGW | 1 cut(s) | 442 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 130, 160 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 373 |
| Bse3DI | GCAATG | 1 cut(s) | 122 |
| BseBI | CCWGG | 1 cut(s) | 465 |
| BseDI | CCNNGG | 1 cut(s) | 463 |
| BseGI | GGATG | 2 cut(s) | 361, 405 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 373 |
| BseMI | GCAATG | 1 cut(s) | 122 |
| BsiSI | CCGG | 2 cut(s) | 313, 443 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 373 |
| Bsp143I | GATC | 3 cut(s) | 185, 403, 451 |
| BspACI | CCGC | 1 cut(s) | 397 |
| BspMAI | CTGCAG | 1 cut(s) | 295 |
| BspPI | GGATC | 3 cut(s) | 180, 411, 446 |
| BsrDI | GCAATG | 1 cut(s) | 122 |
| BssECI | CCNNGG | 1 cut(s) | 463 |
| BssMI | GATC | 3 cut(s) | 185, 403, 451 |
| Bst2UI | CCWGG | 1 cut(s) | 465 |
| BstC8I | GCNNGC | 1 cut(s) | 95 |
| BstF5I | GGATG | 2 cut(s) | 361, 405 |
| BstHHI | GCGC | 1 cut(s) | 223 |
| BstKTI | GATC | 3 cut(s) | 188, 406, 454 |
| BstMBI | GATC | 3 cut(s) | 185, 403, 451 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 133 |
| BstNI | CCWGG | 1 cut(s) | 465 |
| BstNSI | RCATGY | 1 cut(s) | 110 |
| BstSCI | CCNGG | 1 cut(s) | 463 |
| BstSFI | CTRYAG | 1 cut(s) | 291 |
| BstV2I | GAAGAC | 1 cut(s) | 336 |
| BstX2I | RGATCY | 2 cut(s) | 185, 403 |
| BstYI | RGATCY | 2 cut(s) | 185, 403 |
| BtgZI | GCGATG | 1 cut(s) | 117 |
| BtsCI | GGATG | 2 cut(s) | 361, 405 |
| BtsI | GCAGTG | 1 cut(s) | 180 |
| BtsIMutI | CAGTG | 1 cut(s) | 180 |
| Cac8I | GCNNGC | 1 cut(s) | 95 |
| CfoI | GCGC | 1 cut(s) | 223 |
| CviAII | CATG | 3 cut(s) | 107, 217, 449 |
| CviJI | RGCY | 3 cut(s) | 46, 97, 312 |
| CviKI_1 | RGCY | 3 cut(s) | 46, 97, 312 |
| DpnI | GATC | 3 cut(s) | 187, 405, 453 |
| DpnII | GATC | 3 cut(s) | 185, 403, 451 |
| EciI | GGCGGA | 1 cut(s) | 412 |
| Eco57I | CTGAAG | 1 cut(s) | 26 |
| EcoRII | CCWGG | 1 cut(s) | 463 |
| FaeI | CATG | 3 cut(s) | 110, 220, 452 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 351, 383 |
| FatI | CATG | 3 cut(s) | 106, 216, 448 |
| FauNDI | CATATG | 1 cut(s) | 271 |
| FokI | GGATG | 2 cut(s) | 368, 412 |
| GlaI | GCGC | 1 cut(s) | 222 |
| HapII | CCGG | 2 cut(s) | 313, 443 |
| HhaI | GCGC | 1 cut(s) | 223 |
| Hin1II | CATG | 3 cut(s) | 110, 220, 452 |
| Hin6I | GCGC | 1 cut(s) | 221 |
| HinP1I | GCGC | 1 cut(s) | 221 |
| HinfI | GANTC | 1 cut(s) | 340 |
| HpaII | CCGG | 2 cut(s) | 313, 443 |
| Hpy188I | TCNGA | 2 cut(s) | 345, 427 |
| Hpy188III | TCNNGA | 1 cut(s) | 407 |
| HpyAV | CCTTC | 3 cut(s) | 77, 353, 374 |
| HpyCH4V | TGCA | 3 cut(s) | 52, 293, 448 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 133 |
| Hsp92II | CATG | 3 cut(s) | 110, 220, 452 |
| HspAI | GCGC | 1 cut(s) | 221 |
| Kzo9I | GATC | 3 cut(s) | 185, 403, 451 |
| LmnI | GCTCC | 1 cut(s) | 434 |
| LpnPI | CCDG | 6 cut(s) | 107, 167, 326, 392, 450, 456 |
| MaeIII | GTNAC | 1 cut(s) | 34 |
| MalI | GATC | 3 cut(s) | 187, 405, 453 |
| MboI | GATC | 3 cut(s) | 185, 403, 451 |
| MboII | GAAGA | 4 cut(s) | 19, 328, 341, 389 |
| MflI | RGATCY | 2 cut(s) | 185, 403 |
| MluCI | AATT | 4 cut(s) | 232, 285, 346, 471 |
| MlyI | GAGTC | 1 cut(s) | 349 |
| MmeI | TCCRAC | 1 cut(s) | 333 |
| MnlI | CCTC | 5 cut(s) | 152, 161, 287, 385, 421 |
| MseI | TTAA | 2 cut(s) | 12, 81 |
| MspI | CCGG | 2 cut(s) | 313, 443 |
| MspR9I | CCNGG | 1 cut(s) | 465 |
| MvaI | CCWGG | 1 cut(s) | 465 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 133 |
| NdeI | CATATG | 1 cut(s) | 271 |
| NdeII | GATC | 3 cut(s) | 185, 403, 451 |
| NlaIII | CATG | 3 cut(s) | 110, 220, 452 |
| NspI | RCATGY | 1 cut(s) | 110 |
| PciI | ACATGT | 1 cut(s) | 106 |
| PleI | GAGTC | 1 cut(s) | 348 |
| PpsI | GAGTC | 1 cut(s) | 348 |
| PscI | ACATGT | 1 cut(s) | 106 |
| PshBI | ATTAAT | 1 cut(s) | 81 |
| Psp6I | CCWGG | 1 cut(s) | 463 |
| PspGI | CCWGG | 1 cut(s) | 463 |
| PstI | CTGCAG | 1 cut(s) | 295 |
| PsuI | RGATCY | 2 cut(s) | 185, 403 |
| SaqAI | TTAA | 2 cut(s) | 12, 81 |
| Sau3AI | GATC | 3 cut(s) | 185, 403, 451 |
| SchI | GAGTC | 1 cut(s) | 349 |
| ScrFI | CCNGG | 1 cut(s) | 465 |
| SetI | ASST | 4 cut(s) | 36, 336, 364, 432 |
| SfcI | CTRYAG | 1 cut(s) | 291 |
| SmlI | CTYRAG | 1 cut(s) | 168 |
| SmoI | CTYRAG | 1 cut(s) | 168 |
| Sse9I | AATT | 4 cut(s) | 232, 285, 346, 471 |
| SsiI | CCGC | 1 cut(s) | 397 |
| StyD4I | CCNGG | 1 cut(s) | 463 |
| TasI | AATT | 4 cut(s) | 232, 285, 346, 471 |
| Tru1I | TTAA | 2 cut(s) | 12, 81 |
| Tru9I | TTAA | 2 cut(s) | 12, 81 |
| TscAI | CASTG | 1 cut(s) | 180 |
| TspDTI | ATGAA | 2 cut(s) | 190, 372 |
| TspRI | CASTG | 1 cut(s) | 180 |
| VspI | ATTAAT | 1 cut(s) | 81 |
| XapI | RAATTY | 2 cut(s) | 346, 471 |
| XceI | RCATGY | 1 cut(s) | 110 |