f-box protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G58530 |
| fragaria_vesca | FvH4_6g21620 FvH4_6g21620 |
| malus_domestica | MD12G1053200.v1.1 MD14G1051600.v1.1 |
| prunus_persica | Prupe.7G084400_v2.0.a1 |
| pyrus_communis | pycom12g04660 pycom14g04290 pycom14g04300 |
| rosa_chinensis | RchiOBHm_Chr3g0478871 |
| rosa_laevigata | RLG00000023619 |
| rosa_multiflora | Rmu_sc0004831.1_g000004 Rmu_sc0005751.1_g000013 |
| rosa_roxburghii | Rroxscaffold_6G00403010 |
| rosa_rugosa | Rorug03G0168800 |
| rosa_samantha | Rh3AG220400 Rh3BG252300 Rh3CG249100 Rh3DG245300 |
| rosa_wichuraiana | Rw3G019820 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 95 |
| AcsI | RAATTY | 1 cut(s) | 269 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 168 |
| AgsI | TTSAA | 5 cut(s) | 269, 287, 302, 339, 356 |
| Alw21I | GWGCWC | 1 cut(s) | 86 |
| Alw26I | GTCTC | 1 cut(s) | 96 |
| ApeKI | GCWGC | 1 cut(s) | 172 |
| ApoI | RAATTY | 1 cut(s) | 269 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 57 |
| BbsI | GAAGAC | 1 cut(s) | 294 |
| Bbv12I | GWGCWC | 1 cut(s) | 86 |
| BbvI | GCAGC | 1 cut(s) | 159 |
| BcoDI | GTCTC | 1 cut(s) | 96 |
| BfaI | CTAG | 2 cut(s) | 122, 345 |
| BglII | AGATCT | 1 cut(s) | 341 |
| BisI | GCNGC | 1 cut(s) | 173 |
| BlsI | GCNGC | 1 cut(s) | 174 |
| BmsI | GCATC | 2 cut(s) | 211, 304 |
| BpiI | GAAGAC | 1 cut(s) | 294 |
| BsaI | GGTCTC | 1 cut(s) | 96 |
| BsaJI | CCNNGG | 1 cut(s) | 131 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 168 |
| BseDI | CCNNGG | 1 cut(s) | 131 |
| BseGI | GGATG | 1 cut(s) | 226 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 168 |
| BseRI | GAGGAG | 2 cut(s) | 20, 44 |
| BseXI | GCAGC | 1 cut(s) | 159 |
| BseYI | CCCAGC | 1 cut(s) | 203 |
| BsiHKAI | GWGCWC | 1 cut(s) | 86 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 168 |
| BsmAI | GTCTC | 1 cut(s) | 96 |
| Bso31I | GGTCTC | 1 cut(s) | 96 |
| Bsp1286I | GDGCHC | 1 cut(s) | 86 |
| Bsp143I | GATC | 1 cut(s) | 341 |
| Bsp19I | CCATGG | 1 cut(s) | 131 |
| BspACI | CCGC | 1 cut(s) | 95 |
| BspTNI | GGTCTC | 1 cut(s) | 96 |
| BssECI | CCNNGG | 1 cut(s) | 131 |
| BssMI | GATC | 1 cut(s) | 341 |
| BssT1I | CCWWGG | 1 cut(s) | 131 |
| Bst6I | CTCTTC | 1 cut(s) | 340 |
| BstDSI | CCRYGG | 1 cut(s) | 131 |
| BstF5I | GGATG | 1 cut(s) | 226 |
| BstKTI | GATC | 1 cut(s) | 344 |
| BstMAI | GTCTC | 1 cut(s) | 96 |
| BstMBI | GATC | 1 cut(s) | 341 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 253 |
| BstNSI | RCATGY | 1 cut(s) | 251 |
| BstV1I | GCAGC | 1 cut(s) | 159 |
| BstV2I | GAAGAC | 1 cut(s) | 294 |
| BstX2I | RGATCY | 1 cut(s) | 341 |
| BstYI | RGATCY | 1 cut(s) | 341 |
| BtgI | CCRYGG | 1 cut(s) | 131 |
| BtsCI | GGATG | 1 cut(s) | 226 |
| CviAII | CATG | 2 cut(s) | 132, 248 |
| CviJI | RGCY | 3 cut(s) | 129, 136, 172 |
| CviKI_1 | RGCY | 3 cut(s) | 129, 136, 172 |
| DpnI | GATC | 1 cut(s) | 343 |
| DpnII | GATC | 1 cut(s) | 341 |
| Eam1104I | CTCTTC | 1 cut(s) | 340 |
| EarI | CTCTTC | 1 cut(s) | 340 |
| Eco130I | CCWWGG | 1 cut(s) | 131 |
| Eco31I | GGTCTC | 1 cut(s) | 96 |
| EcoT14I | CCWWGG | 1 cut(s) | 131 |
| ErhI | CCWWGG | 1 cut(s) | 131 |
| FaeI | CATG | 2 cut(s) | 135, 251 |
| FaiI | YATR | 5 cut(s) | 133, 152, 249, 258, 260 |
| FatI | CATG | 2 cut(s) | 131, 247 |
| Fnu4HI | GCNGC | 1 cut(s) | 173 |
| FokI | GGATG | 1 cut(s) | 233 |
| Fsp4HI | GCNGC | 1 cut(s) | 173 |
| FspBI | CTAG | 2 cut(s) | 122, 345 |
| GluI | GCNGC | 1 cut(s) | 173 |
| GsaI | CCCAGC | 1 cut(s) | 207 |
| Hin1II | CATG | 2 cut(s) | 135, 251 |
| HinfI | GANTC | 3 cut(s) | 208, 330, 356 |
| Hpy188I | TCNGA | 1 cut(s) | 72 |
| Hpy188III | TCNNGA | 5 cut(s) | 188, 299, 327, 339, 345 |
| HpyCH4V | TGCA | 1 cut(s) | 275 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 253 |
| Hsp92II | CATG | 2 cut(s) | 135, 251 |
| Kzo9I | GATC | 1 cut(s) | 341 |
| LmnI | GCTCC | 1 cut(s) | 45 |
| LpnPI | CCDG | 3 cut(s) | 9, 169, 189 |
| Lsp1109I | GCAGC | 1 cut(s) | 159 |
| LweI | GCATC | 2 cut(s) | 211, 304 |
| MaeI | CTAG | 2 cut(s) | 122, 345 |
| MaeIII | GTNAC | 1 cut(s) | 37 |
| MalI | GATC | 1 cut(s) | 343 |
| MboI | GATC | 1 cut(s) | 341 |
| MboII | GAAGA | 2 cut(s) | 299, 327 |
| MflI | RGATCY | 1 cut(s) | 341 |
| MhlI | GDGCHC | 1 cut(s) | 86 |
| MluCI | AATT | 1 cut(s) | 269 |
| MnlI | CCTC | 5 cut(s) | 22, 25, 116, 172, 341 |
| MroXI | GAANNNNTTC | 1 cut(s) | 57 |
| MseI | TTAA | 1 cut(s) | 361 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 253 |
| NcoI | CCATGG | 1 cut(s) | 131 |
| NdeII | GATC | 1 cut(s) | 341 |
| NlaIII | CATG | 2 cut(s) | 135, 251 |
| NspI | RCATGY | 1 cut(s) | 251 |
| PdmI | GAANNNNTTC | 1 cut(s) | 57 |
| PfeI | GAWTC | 3 cut(s) | 208, 330, 356 |
| PflFI | GACNNNGTC | 1 cut(s) | 322 |
| PkrI | GCNGC | 1 cut(s) | 174 |
| PspFI | CCCAGC | 1 cut(s) | 203 |
| PsuI | RGATCY | 1 cut(s) | 341 |
| PsyI | GACNNNGTC | 1 cut(s) | 322 |
| SaqAI | TTAA | 1 cut(s) | 361 |
| SatI | GCNGC | 1 cut(s) | 173 |
| Sau3AI | GATC | 1 cut(s) | 341 |
| SduI | GDGCHC | 1 cut(s) | 86 |
| SetI | ASST | 3 cut(s) | 108, 267, 352 |
| SfaNI | GCATC | 2 cut(s) | 211, 304 |
| Sse9I | AATT | 1 cut(s) | 269 |
| SsiI | CCGC | 1 cut(s) | 95 |
| SspMI | CTAG | 2 cut(s) | 122, 345 |
| StyI | CCWWGG | 1 cut(s) | 131 |
| TaqI | TCGA | 2 cut(s) | 187, 326 |
| TasI | AATT | 1 cut(s) | 269 |
| TfiI | GAWTC | 3 cut(s) | 208, 330, 356 |
| Tru1I | TTAA | 1 cut(s) | 361 |
| Tru9I | TTAA | 1 cut(s) | 361 |
| TseI | GCWGC | 1 cut(s) | 172 |
| TspDTI | ATGAA | 2 cut(s) | 209, 219 |
| Tth111I | GACNNNGTC | 1 cut(s) | 322 |
| XapI | RAATTY | 1 cut(s) | 269 |
| XbaI | TCTAGA | 1 cut(s) | 344 |
| XceI | RCATGY | 1 cut(s) | 251 |
| XmnI | GAANNNNTTC | 1 cut(s) | 57 |
| XspI | CTAG | 2 cut(s) | 122, 345 |