Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0001088

Physical Location & Seq

Genomic Coordinates Forward (+)

14259991 .. 14265436

Gene Structure 5446 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0168800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1902 bp

ATGAGAGTGATGGCCACTCTCTCTCAGTTTCCGGGCTTCCCTTCCCTCCTCTCTCCCAAACTCGTCTTCTTCGACCCGAAACAACACCAGCTCAAACTCCGGCGATGCACCGCTCAACATCCACCGTCTCCGGTACACTTCTCGGTTCGCGCTTCTTCGTCCGTCAAGAAATCCAGGCGGAGGAAGGTGAAGAGCAATGAGGAGCTTTGCAATGAACTCATGGAGTTTATCGCTGCTGTTGGACTTCCACAAGGTCATGTTCCCTCCATGAAAGAGCTCTCGCAGAACGGAAGGAATGACCTTGCATACATTGTGAGACGGAGGGGATATAAACTTATAAGAGAGCTTCTTGCGGACTCCAAAGAATCAGAATCGACGGATGTGGATGGTAATGCGGATAACTTTATAGCTGAAAATGATGATGGTCAGAAAGATATAGTGACAGGTCAGTATCAAGAGGTGAATGATGTGGTTGAGGAATTCTCATCCTTGAGTGAAGTTTCAATCTTGGAAAGTAGTTCTGAAGCTTTGGTTACTGATCCAGTTCTGAAACACGATGATGGTGTTGATGTACCTGTGGAATCTTTGACGGATTCACTTTTGCAGGACACATCCTCAGGTAATTTAGAAGGTCATGGTGAATGGGAGGATGGTATGGAAGGCAATGGTCGTGTGTCAAATGTTCCTATTATTGAGAGTCATGTCAATAGTTCTAAGATTGGTACAGCCTTCAACTCCGACCACCATACACCAGTAGAAATTTGCACCAATTCATCATTGGATGTACTAGAAGATTTATCCTTACCGACCACCATTCCCATCAAACAAAATGATTCTGATAGTCCAAATATTGGTTGGGATCTGAACTCTGATGGACAACCTAGTGTGCCTATAGAATCTGGGACCCATTGGTCCTCAGATAAAAAAGCCTTACATAGGGACCGGGATGGGAAGGTTGACAATATGGCTGATGAAGTTTCATTGTCAACCAAAGCTTCAGTTATGGAAGAGGAAGATCATCACTCTAGTTCAGATCTTGAACTAAATCAGAATTCTGATGACGATAGTGATGCACCAGTAAAATATCCAGTGAATTTGCCCTTGGAGGAAAAGGTGACAAAATTTATGCAGAATGGAGACCTGGATGCACTTGAAGATAACATCTATGGTGTATCAATTGAGAGTGATGCTGAAGAAATCAAGAGTAGCAATAAGTTCGGGAATGCTGAAGAAGTTCAACTAAGAACTCCTACTTCAGAGTACTCAAAACATATGTTTGATGGAAGTGACGCAACATCTGAGCAAATTTTGTCTTCAACAGCAGTTGACCCCCCTCTTGGTGATGCTACTTCATTAGCTGATTCGCGGAGTTCTCTATCTGACAAGAATTTGGATGTTAAGACAAGTGAAAGGGAGGATCAACATGATATTAGTCGTCTCAAGTCCATTCTGCATCAGAAGGAGTTAGAATTGTCTCGGTTGAAAGAACAGATTGAGAAGGAACAGCATGCCTTGTCGGTCTTGCAAGCAAACGCAGAAACAGCAATCAGCGAAGCACAAAAGCTTATCTGCGAAAAAGATGCAGAGTTGCTTGCTGCTGAAGAAAACCTTTCAGGACTAGTGGAGGTTGAGATCCAGTATCATGGTGATGGTGAAATTGTGGAGGTGACCGGTAGCTTCAATGGTTGGCATCATCAGATTAAATTGGATCCACAGCCACCATCCAGTATCATAGACCATGCTGGATCAAGGAAATCCAGGCTGTGGTCAACGATGCTATGGCTTTACCCAGGAGTATATGAGATAAAATTCCTCGTTGACGGCCATTGGAGTATTGATCCTCAAAGAGAAACAGTTACTAGGGGTACAATATGTAATAACATTCTCAGAGTTGACGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000932 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005976 GO:0005982 GO:0005984 GO:0005985 GO:0005986 GO:0006073 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009311 GO:0009312 GO:0009987 GO:0010467 GO:0016051 GO:0016070 GO:0016071 GO:0019252 GO:0032991 GO:0033692 GO:0034637 GO:0034641 GO:0034645 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046351 GO:0046483 GO:0071704 GO:0090304 GO:1901360 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

Exo_endo_phos zf-C6H2

Protein Analysis

633

Amino Acids

70.07

Weight (kDa)

4.68

Isoelectric Point (pI)

49.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMPK1_CBM	PF16561	542 - 631	1.1e-15	Glycogen recognition site of AMP-activated protein kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0001088)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G58560 AT3G58580
fragaria_vesca	FvH4_5g37360 FvH4_5g37360 FvH4_5g37650 FvH4_6g21630 FvH4_6g21630 FvH4_6g21630 FvH4_6g21630 FvH4_6g21630
malus_domestica	MD08G1182500.v1.1 MD12G1053300.v1.1 MD14G1051700.v1.1 MD15G1368200.v1.1 MD15G1368500.v1.1
prunus_persica	Prupe.1G516400_v2.0.a1 Prupe.1G516400_v2.0.a1 Prupe.1G516400_v2.0.a1 Prupe.7G084300_v2.0.a1
pyrus_communis	pycom08g15630 pycom15g33010 pycom15g33030
rosa_chinensis	RchiOBHm_Chr3g0478881 RchiOBHm_Chr7g0227401 RchiOBHm_Chr7g0239031
rosa_laevigata	RLG00000000789 RLG00000001657 RLG00000023618
rosa_multiflora	Rmu_sc0000868.1_g000004 Rmu_sc0004831.1_g000003 Rmu_sc0005651.1_g000003 Rmu_sc0005751.1_g000015
rosa_roxburghii	Rroxscaffold_3G00221350 Rroxscaffold_3G00237900 Rroxscaffold_3G00237980 Rroxscaffold_3G00238050 Rroxscaffold_5G00332920 Rroxscaffold_6G00403000 Rroxscaffold_6G00413120 Rroxscaffold_7G00214960
rosa_rugosa	Rorug03G0168800 Rorug03G0168900 Rorug07G0324800
rosa_samantha	Rh2DG401300 Rh3AG220500 Rh3BG252400 Rh3CG249200 Rh3DG245400 Rh6AG177800 Rh7AG393200 Rh7AG479600 Rh7BG452100 Rh7CG412400 Rh7CG497100 Rh7DG464600
rosa_wichuraiana	Rw2G030830 Rw3G019830 Rw6G015170 Rw7G040100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	338
AasI	GACNNNNNNGTC	1 cut(s)	910
AccB7I	CCANNNNNTGG	2 cut(s)	851, 1764
AccBSI	CCGCTC	1 cut(s)	113
AccII	CGCG	2 cut(s)	150, 1366
AciI	CCGC	5 cut(s)	111, 178, 353, 395, 1366
AclWI	GGATC	8 cut(s)	533, 867, 1425, 1627, 1703, 1716, 1753, 1832
AcoI	YGGCCR	2 cut(s)	12, 1822
AcsI	RAATTY	8 cut(s)	479, 759, 1051, 1093, 1121, 1305, 1387, 1808
AcuI	CTGAAG	6 cut(s)	543, 981, 1212, 1239, 1248, 1620
AfaI	GTAC	6 cut(s)	135, 573, 724, 786, 1262, 1867
AfiI	CCNNNNNNNGG	5 cut(s)	180, 851, 936, 1337, 1764
AgeI	ACCGGT	1 cut(s)	1670
AgsI	TTSAA	8 cut(s)	504, 733, 1040, 1154, 1238, 1317, 1483, 1681
AhlI	ACTAGT	1 cut(s)	1618
AjnI	CCWGG	4 cut(s)	173, 1140, 1757, 1789
AjuI	GAANNNNNNNTTGG	4 cut(s)	50, 82, 1085, 1117
Alw21I	GWGCWC	1 cut(s)	279
Alw26I	GTCTC	5 cut(s)	132, 310, 1131, 1442, 1479
AlwI	GGATC	8 cut(s)	533, 867, 1425, 1627, 1703, 1716, 1753, 1832
AoxI	GGCC	2 cut(s)	12, 1822
ApeKI	GCWGC	2 cut(s)	233, 1595
ApoI	RAATTY	8 cut(s)	479, 759, 1051, 1093, 1121, 1305, 1387, 1808
AsiGI	ACCGGT	1 cut(s)	1670
Asp700I	GAANNNNTTC	1 cut(s)	1233
AspLEI	GCGC	1 cut(s)	152
AspS9I	GGNCC	3 cut(s)	903, 912, 940
AsuC2I	CCSGG	2 cut(s)	33, 944
AsuHPI	GGTGA	8 cut(s)	199, 472, 650, 1126, 1352, 1658, 1664, 1678
AvaII	GGWCC	3 cut(s)	903, 912, 940
AxyI	CCTNAGG	1 cut(s)	616
BalI	TGGCCA	1 cut(s)	14
BamHI	GGATCC	1 cut(s)	1708
BanII	GRGCYC	1 cut(s)	279
BbsI	GAAGAC	2 cut(s)	58, 1305
Bbv12I	GWGCWC	1 cut(s)	279
BbvI	GCAGC	2 cut(s)	220, 1582
BceAI	ACGGC	1 cut(s)	1837
BcgI	CGANNNNNNTGC	6 cut(s)	1052, 1086, 1198, 1232, 1562, 1596
BciT130I	CCWGG	4 cut(s)	175, 1142, 1759, 1791
BcnI	CCSGG	2 cut(s)	33, 944
BcoDI	GTCTC	5 cut(s)	132, 310, 1131, 1442, 1479
BcuI	ACTAGT	1 cut(s)	1618
BfaI	CTAG	5 cut(s)	788, 882, 1026, 1619, 1860
BfmI	CTRYAG	1 cut(s)	891
BglII	AGATCT	1 cut(s)	1033
BisI	GCNGC	2 cut(s)	234, 1596
BlsI	GCNGC	2 cut(s)	235, 1597
BmcAI	AGTACT	1 cut(s)	1262
Bme1390I	CCNGG	6 cut(s)	33, 175, 944, 1142, 1759, 1791
Bme18I	GGWCC	3 cut(s)	903, 912, 940
BmgT120I	GGNCC	3 cut(s)	903, 912, 940
BmiI	GGNNCC	4 cut(s)	904, 905, 941, 1710
BmrFI	CCNGG	6 cut(s)	33, 175, 944, 1142, 1759, 1791
BmsI	GCATC	9 cut(s)	95, 1060, 1135, 1177, 1333, 1462, 1570, 1699, 1764
BpiI	GAAGAC	2 cut(s)	58, 1305
BplI	GAGNNNNNCTC	2 cut(s)	467, 499
BpuEI	CTTGAG	2 cut(s)	511, 1424
BpuMI	CCSGG	2 cut(s)	33, 944
BsaI	GGTCTC	1 cut(s)	1131
BsaJI	CCNNGG	2 cut(s)	1101, 1789
BsaWI	WCCGGW	2 cut(s)	130, 1670
Bsc4I	CCNNNNNNNGG	5 cut(s)	180, 851, 936, 1337, 1764
Bse118I	RCCGGY	1 cut(s)	1670
Bse1I	ACTGG	6 cut(s)	542, 752, 1076, 1088, 1636, 1725
Bse21I	CCTNAGG	1 cut(s)	616
Bse3DI	GCAATG	3 cut(s)	202, 217, 670
BseBI	CCWGG	4 cut(s)	175, 1142, 1759, 1791
BseDI	CCNNGG	2 cut(s)	1101, 1789
BseLI	CCNNNNNNNGG	5 cut(s)	180, 851, 936, 1337, 1764
BseMI	GCAATG	3 cut(s)	202, 217, 670
BseMII	CTCAG	5 cut(s)	38, 630, 930, 1290, 1900
BseNI	ACTGG	6 cut(s)	542, 752, 1076, 1088, 1636, 1725
BseRI	GAGGAG	2 cut(s)	38, 215
BseXI	GCAGC	2 cut(s)	220, 1582
Bsh1236I	CGCG	2 cut(s)	150, 1366
BshFI	GGCC	2 cut(s)	14, 1824
BshTI	ACCGGT	1 cut(s)	1670
BsiHKAI	GWGCWC	1 cut(s)	279
BsiSI	CCGG	5 cut(s)	32, 100, 131, 943, 1671
BslFI	GGGAC	2 cut(s)	916, 953
BslI	CCNNNNNNNGG	5 cut(s)	180, 851, 936, 1337, 1764
BsmAI	GTCTC	5 cut(s)	132, 310, 1131, 1442, 1479
BsmBI	CGTCTC	3 cut(s)	132, 310, 1442
BsmFI	GGGAC	2 cut(s)	916, 953
BsmI	GAATGC	1 cut(s)	1228
BsnI	GGCC	2 cut(s)	14, 1824
Bso31I	GGTCTC	1 cut(s)	1131
Bsp1286I	GDGCHC	1 cut(s)	279
Bsp143I	GATC	9 cut(s)	538, 859, 1015, 1033, 1417, 1632, 1708, 1745, 1837
BspACI	CCGC	5 cut(s)	111, 178, 353, 395, 1366
BspANI	GGCC	2 cut(s)	14, 1824
BspCNI	CTCAG	5 cut(s)	37, 629, 929, 1291, 1899
BspFNI	CGCG	2 cut(s)	150, 1366
BspLI	GGNNCC	4 cut(s)	904, 905, 941, 1710
BspPI	GGATC	8 cut(s)	533, 867, 1425, 1627, 1703, 1716, 1753, 1832
BspQI	GCTCTTC	1 cut(s)	185
BspTNI	GGTCTC	1 cut(s)	1131
BsrBI	CCGCTC	1 cut(s)	113
BsrDI	GCAATG	3 cut(s)	202, 217, 670
BsrFI	RCCGGY	1 cut(s)	1670
BsrI	ACTGG	6 cut(s)	542, 752, 1076, 1088, 1636, 1725
BssAI	RCCGGY	1 cut(s)	1670
BssECI	CCNNGG	2 cut(s)	1101, 1789
BssMI	GATC	9 cut(s)	538, 859, 1015, 1033, 1417, 1632, 1708, 1745, 1837
BssT1I	CCWWGG	1 cut(s)	1101
Bst2UI	CCWGG	4 cut(s)	175, 1142, 1759, 1791
Bst4CI	ACNGT	3 cut(s)	126, 1855, 1898
Bst6I	CTCTTC	2 cut(s)	185, 1002
BstC8I	GCNNGC	3 cut(s)	1509, 1527, 1593
BstDEI	CTNAG	7 cut(s)	24, 616, 714, 916, 1241, 1299, 1886
BstEII	GGTNACC	1 cut(s)	1666
BstENI	CCTNNNNNAGG	1 cut(s)	934
BstFNI	CGCG	2 cut(s)	150, 1366
BstHHI	GCGC	1 cut(s)	152
BstKTI	GATC	9 cut(s)	541, 862, 1018, 1036, 1420, 1635, 1711, 1748, 1840
BstMAI	GTCTC	5 cut(s)	132, 310, 1131, 1442, 1479
BstMBI	GATC	9 cut(s)	538, 859, 1015, 1033, 1417, 1632, 1708, 1745, 1837
BstMWI	GCNNNNNNNGC	1 cut(s)	1541
BstNI	CCWGG	4 cut(s)	175, 1142, 1759, 1791
BstNSI	RCATGY	1 cut(s)	1511
BstPI	GGTNACC	1 cut(s)	1666
BstSCI	CCNGG	6 cut(s)	31, 173, 942, 1140, 1757, 1789
BstSFI	CTRYAG	1 cut(s)	891
BstUI	CGCG	2 cut(s)	150, 1366
BstV1I	GCAGC	2 cut(s)	220, 1582
BstV2I	GAAGAC	2 cut(s)	58, 1305
BstX2I	RGATCY	4 cut(s)	859, 1033, 1632, 1708
BstXI	CCANNNNNNTGG	1 cut(s)	1643
BstYI	RGATCY	4 cut(s)	859, 1033, 1632, 1708
Bsu36I	CCTNAGG	1 cut(s)	616
BsuRI	GGCC	2 cut(s)	14, 1824
BtgZI	GCGATG	1 cut(s)	118
BtsIMutI	CAGTG	1 cut(s)	1095
Cac8I	GCNNGC	3 cut(s)	1509, 1527, 1593
CfoI	GCGC	1 cut(s)	152
Cfr10I	RCCGGY	1 cut(s)	1670
Cfr13I	GGNCC	3 cut(s)	903, 912, 940
CseI	GACGC	1 cut(s)	1298
Csp6I	GTAC	6 cut(s)	134, 572, 723, 785, 1261, 1866
CspAI	ACCGGT	1 cut(s)	1670
CviAII	CATG	9 cut(s)	220, 257, 268, 635, 701, 1424, 1508, 1643, 1739
CviQI	GTAC	6 cut(s)	134, 572, 723, 785, 1261, 1866
DdeI	CTNAG	7 cut(s)	24, 616, 714, 916, 1241, 1299, 1886
DpnI	GATC	9 cut(s)	540, 861, 1017, 1035, 1419, 1634, 1710, 1747, 1839
DpnII	GATC	9 cut(s)	538, 859, 1015, 1033, 1417, 1632, 1708, 1745, 1837
DrdI	GACNNNNNNGTC	1 cut(s)	910
DseDI	GACNNNNNNGTC	1 cut(s)	910
EaeI	YGGCCR	2 cut(s)	12, 1822
Eam1104I	CTCTTC	2 cut(s)	185, 1002
EarI	CTCTTC	2 cut(s)	185, 1002
EciI	GGCGGA	1 cut(s)	193
Ecl136II	GAGCTC	1 cut(s)	277
Eco130I	CCWWGG	1 cut(s)	1101
Eco24I	GRGCYC	1 cut(s)	279
Eco31I	GGTCTC	1 cut(s)	1131
Eco47I	GGWCC	3 cut(s)	903, 912, 940
Eco53kI	GAGCTC	1 cut(s)	277
Eco57I	CTGAAG	6 cut(s)	543, 981, 1212, 1239, 1248, 1620
Eco81I	CCTNAGG	1 cut(s)	616
Eco91I	GGTNACC	1 cut(s)	1666
EcoICRI	GAGCTC	1 cut(s)	277
EcoNI	CCTNNNNNAGG	1 cut(s)	934
EcoO109I	RGGNCCY	1 cut(s)	903
EcoO65I	GGTNACC	1 cut(s)	1666
EcoRI	GAATTC	2 cut(s)	479, 1051
EcoRII	CCWGG	4 cut(s)	173, 1140, 1757, 1789
EcoT14I	CCWWGG	1 cut(s)	1101
EcoT38I	GRGCYC	1 cut(s)	279
ErhI	CCWWGG	1 cut(s)	1101
Esp3I	CGTCTC	3 cut(s)	132, 310, 1442
FaeI	CATG	9 cut(s)	223, 260, 271, 638, 704, 1427, 1511, 1646, 1742
FalI	AAGNNNNNCTT	2 cut(s)	1593, 1625
FaqI	GGGAC	2 cut(s)	916, 953
FatI	CATG	9 cut(s)	219, 256, 267, 634, 700, 1423, 1507, 1642, 1738
FauNDI	CATATG	1 cut(s)	1272
Fnu4HI	GCNGC	2 cut(s)	234, 1596
FriOI	GRGCYC	1 cut(s)	279
Fsp4HI	GCNGC	2 cut(s)	234, 1596
FspBI	CTAG	5 cut(s)	788, 882, 1026, 1619, 1860
GlaI	GCGC	1 cut(s)	151
GluI	GCNGC	2 cut(s)	234, 1596
HaeIII	GGCC	2 cut(s)	14, 1824
HapII	CCGG	5 cut(s)	32, 100, 131, 943, 1671
HgaI	GACGC	1 cut(s)	1298
HhaI	GCGC	1 cut(s)	152
Hin1II	CATG	9 cut(s)	223, 260, 271, 638, 704, 1427, 1511, 1646, 1742
Hin6I	GCGC	1 cut(s)	150
HinP1I	GCGC	1 cut(s)	150
HincII	GTYRAC	6 cut(s)	958, 987, 1327, 1770, 1819, 1894
HindII	GTYRAC	6 cut(s)	958, 987, 1327, 1770, 1819, 1894
HindIII	AAGCTT	3 cut(s)	525, 993, 1562
HinfI	GANTC	9 cut(s)	356, 365, 371, 581, 593, 697, 833, 896, 1361
HpaII	CCGG	5 cut(s)	32, 100, 131, 943, 1671
HphI	GGTGA	8 cut(s)	199, 472, 650, 1126, 1352, 1658, 1664, 1678
Hpy166II	GTNNAC	7 cut(s)	136, 958, 987, 1327, 1770, 1819, 1894
Hpy188III	TCNNGA	6 cut(s)	166, 455, 1037, 1201, 1219, 1614
Hpy8I	GTNNAC	7 cut(s)	136, 958, 987, 1327, 1770, 1819, 1894
Hpy99I	CGWCG	1 cut(s)	379
HpyAV	CCTTC	9 cut(s)	51, 178, 285, 623, 653, 739, 946, 1453, 1492
HpyCH4III	ACNGT	3 cut(s)	126, 1855, 1898
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1541
HpyF3I	CTNAG	7 cut(s)	24, 616, 714, 916, 1241, 1299, 1886
Hsp92II	CATG	9 cut(s)	223, 260, 271, 638, 704, 1427, 1511, 1646, 1742
HspAI	GCGC	1 cut(s)	150
KflI	GGGWCCC	1 cut(s)	903
Kzo9I	GATC	9 cut(s)	538, 859, 1015, 1033, 1417, 1632, 1708, 1745, 1837
LguI	GCTCTTC	1 cut(s)	185
LmnI	GCTCC	1 cut(s)	202
Lsp1109I	GCAGC	2 cut(s)	220, 1582
LweI	GCATC	9 cut(s)	95, 1060, 1135, 1177, 1333, 1462, 1570, 1699, 1764
MaeI	CTAG	5 cut(s)	788, 882, 1026, 1619, 1860
MaeIII	GTNAC	6 cut(s)	439, 532, 1114, 1286, 1666, 1855
MalI	GATC	9 cut(s)	540, 861, 1017, 1035, 1419, 1634, 1710, 1747, 1839
MbiI	CCGCTC	1 cut(s)	113
MboI	GATC	9 cut(s)	538, 859, 1015, 1033, 1417, 1632, 1708, 1745, 1837
MfeI	CAATTG	1 cut(s)	1176
MflI	RGATCY	4 cut(s)	859, 1033, 1632, 1708
MhlI	GDGCHC	1 cut(s)	279
MlsI	TGGCCA	1 cut(s)	14
MluNI	TGGCCA	1 cut(s)	14
MlyI	GAGTC	2 cut(s)	350, 706
MmeI	TCCRAC	2 cut(s)	220, 762
Mox20I	TGGCCA	1 cut(s)	14
MroXI	GAANNNNTTC	1 cut(s)	1233
MscI	TGGCCA	1 cut(s)	14
MseI	TTAA	3 cut(s)	1398, 1701, 1900
MslI	CAYNNNNRTG	2 cut(s)	558, 1647
Msp20I	TGGCCA	1 cut(s)	14
MspI	CCGG	5 cut(s)	32, 100, 131, 943, 1671
MspR9I	CCNGG	6 cut(s)	33, 175, 944, 1142, 1759, 1791
MunI	CAATTG	1 cut(s)	1176
Mva1269I	GAATGC	1 cut(s)	1228
MvaI	CCWGG	4 cut(s)	175, 1142, 1759, 1791
MvnI	CGCG	2 cut(s)	150, 1366
MwoI	GCNNNNNNNGC	1 cut(s)	1541
NciI	CCSGG	2 cut(s)	33, 944
NdeI	CATATG	1 cut(s)	1272
NdeII	GATC	9 cut(s)	538, 859, 1015, 1033, 1417, 1632, 1708, 1745, 1837
NlaIII	CATG	9 cut(s)	223, 260, 271, 638, 704, 1427, 1511, 1646, 1742
NlaIV	GGNNCC	4 cut(s)	904, 905, 941, 1710
NmuCI	GTSAC	4 cut(s)	439, 1114, 1286, 1666
NspI	RCATGY	1 cut(s)	1511
PaeI	GCATGC	1 cut(s)	1511
PciSI	GCTCTTC	1 cut(s)	185
PcsI	WCGNNNNNNNCGW	1 cut(s)	69
PctI	GAATGC	1 cut(s)	1228
PdmI	GAANNNNTTC	1 cut(s)	1233
PfeI	GAWTC	7 cut(s)	365, 371, 581, 593, 833, 896, 1361
PflMI	CCANNNNNTGG	2 cut(s)	851, 1764
PinAI	ACCGGT	1 cut(s)	1670
PkrI	GCNGC	2 cut(s)	235, 1597
PleI	GAGTC	2 cut(s)	350, 705
PpsI	GAGTC	2 cut(s)	350, 705
PpuMI	RGGWCCY	1 cut(s)	903
PsiI	TTATAA	1 cut(s)	338
Psp124BI	GAGCTC	1 cut(s)	279
Psp5II	RGGWCCY	1 cut(s)	903
Psp6I	CCWGG	4 cut(s)	173, 1140, 1757, 1789
PspEI	GGTNACC	1 cut(s)	1666
PspGI	CCWGG	4 cut(s)	173, 1140, 1757, 1789
PspN4I	GGNNCC	4 cut(s)	904, 905, 941, 1710
PspPI	GGNCC	3 cut(s)	903, 912, 940
PspPPI	RGGWCCY	1 cut(s)	903
PsuI	RGATCY	4 cut(s)	859, 1033, 1632, 1708
RsaI	GTAC	6 cut(s)	135, 573, 724, 786, 1262, 1867
RsaNI	GTAC	6 cut(s)	134, 572, 723, 785, 1261, 1866
RseI	CAYNNNNRTG	2 cut(s)	558, 1647
SacI	GAGCTC	1 cut(s)	279
SapI	GCTCTTC	1 cut(s)	185
SaqAI	TTAA	3 cut(s)	1398, 1701, 1900
SatI	GCNGC	2 cut(s)	234, 1596
Sau3AI	GATC	9 cut(s)	538, 859, 1015, 1033, 1417, 1632, 1708, 1745, 1837
Sau96I	GGNCC	3 cut(s)	903, 912, 940
ScaI	AGTACT	1 cut(s)	1262
SchI	GAGTC	2 cut(s)	350, 706
ScrFI	CCNGG	6 cut(s)	33, 175, 944, 1142, 1759, 1791
SduI	GDGCHC	1 cut(s)	279
SfaNI	GCATC	9 cut(s)	95, 1060, 1135, 1177, 1333, 1462, 1570, 1699, 1764
SfcI	CTRYAG	1 cut(s)	891
SinI	GGWCC	3 cut(s)	903, 912, 940
SmiMI	CAYNNNNRTG	2 cut(s)	558, 1647
SmlI	CTYRAG	2 cut(s)	490, 1439
SmoI	CTYRAG	2 cut(s)	490, 1439
SpeI	ACTAGT	1 cut(s)	1618
SphI	GCATGC	1 cut(s)	1511
SsiI	CCGC	5 cut(s)	111, 178, 353, 395, 1366
SspI	AATATT	1 cut(s)	850
SspMI	CTAG	5 cut(s)	788, 882, 1026, 1619, 1860
SstI	GAGCTC	1 cut(s)	279
StyD4I	CCNGG	6 cut(s)	31, 173, 942, 1140, 1757, 1789
StyI	CCWWGG	1 cut(s)	1101
TaaI	ACNGT	3 cut(s)	126, 1855, 1898
TaqI	TCGA	2 cut(s)	72, 374
TaqII	GACCGA	1 cut(s)	1507
TatI	WGTACW	2 cut(s)	784, 1260
TfiI	GAWTC	7 cut(s)	365, 371, 581, 593, 833, 896, 1361
Tru1I	TTAA	3 cut(s)	1398, 1701, 1900
Tru9I	TTAA	3 cut(s)	1398, 1701, 1900
TscAI	CASTG	1 cut(s)	1095
TseFI	GTSAC	4 cut(s)	439, 1114, 1286, 1666
TseI	GCWGC	2 cut(s)	233, 1595
Tsp45I	GTSAC	4 cut(s)	439, 1114, 1286, 1666
TspDTI	ATGAA	6 cut(s)	228, 284, 762, 969, 987, 1341
TspGWI	ACGGA	5 cut(s)	151, 303, 334, 392, 605
TspRI	CASTG	1 cut(s)	1095
Van91I	CCANNNNNTGG	2 cut(s)	851, 1764
VpaK11BI	GGWCC	3 cut(s)	903, 912, 940
XagI	CCTNNNNNAGG	1 cut(s)	934
XapI	RAATTY	8 cut(s)	479, 759, 1051, 1093, 1121, 1305, 1387, 1808
XceI	RCATGY	1 cut(s)	1511
XcmI	CCANNNNNNNNNTGG	2 cut(s)	775, 852
XmnI	GAANNNNTTC	1 cut(s)	1233
XspI	CTAG	5 cut(s)	788, 882, 1026, 1619, 1860
ZrmI	AGTACT	1 cut(s)	1262

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.