FvH4_5g37360

Carbon catabolite repressor protein 4 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0001088
Physical Location & Seq
Forward (+)
27466351 .. 27473240
6890 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g37360.t1

Sequence Viewer

Length: 1941 bp
ATGGATCCTCATCCAAACCCCAATGCGGGTTCTTCTTCTACTTCAAACCCTGTTATGGGTTCTTCTCCTGCTTCAAACCCTGGTGTGGGTTCTTCTGATCCTTCAAGATACAGTCTCCGAGTGCAAATGGGCACCAAACGTGAAGTTGAACCAGTCTTTGGCTGCAGAATCACCCCTACAGCTCGTTTGATCAACCCTAATGCCATCACTGAAGTACCCCCCGAGCACAAGTTCAATTTCAAGTGGTATCGGAAGTATGAGTTAAACGCAAACAAAGACAATATCAGGTGCAGTGTCCACCCTGATAAGGTGGCTACTCTCGTGTGTGTTGAATGTGTCAAACTGAAGCTACCTGCCAAGGGAAGTTACCATTGCACGGCCGTTTGTTACCGGGACAAATGGCAGAACCACAGGAAGTTGCATCTTTCCGCTAAAGTTGCATCTCCTAATAATCAACCAGCGGACAAAGATGAGATTTATAGCTGGCCTCAGTATAATGATGGGTTGAGGTGTGCTCTTCAAGAGCTGGACCATTGGGTTGAGATGTGCTCTTCAATGTCTTACACACCCACAGAGGAAGACCTTGGCAGCAGATTGATGCTGGTAACTACAGCTGTTGATTCAAATAATCAGGTTTTGTGCCCGAACAATACCATCGAGACAGTTCCTGTTCGGTACGCTCAAGGTCAGAAACCTCGCTGCATACTTGAGTGTCAGCAGAAATCTGGGGACTCTCATATTCGCTCCAAACTCCAAGCACACTCTTCCGGCGGTGTAAAAATTAGTGTGCTATCATATAATGTTCTTGCTGATATTTACGCTCATGATGGTCAATACTCTGAATTGCCAGCAAAATGGTCTTTAACTTGGGAATATCGTCAGCAGAATTTACTAGATGAGATCATTGAATATGATGCAGACATCCTCTGTCTTCAAGAGGTACTAAGTACTCATCTCGAGAAATTCTTCACACCTGAGTTGGAAAAATTAGGATACTCTGGCATATACAAGAAGAAAAGTGGAGACATTTATACAAGTTACGGTCATTGCATGGATGGTTGTGCTATATTTTATCGCCGTGATGCATTCAAAGAAATTGTAAAATATGAGCGTGCATTTGATAGCTCTATACTGAGAGTGATTGGAGAATTACAGCCAATAGTAAGGGAAGGGAAAGATGCAGCTTTTCAAAGGCTGAAGCAGCATGAGTCTGATAGCTCTTTACGGAGAGTTTTGGAAGCATTTGAAGCATTGCAACCTCAAGAGAGAGATGAAGCTTTTCAAAGGCTGAAGAAGCCCAATGTTGCACTTGTTGTTATATTGGAAAAACTGGAAAGTGAGGGCACTTGCGAGGGCATTCAACCTAGAATCTGTGTGGCAAATACCCACATATATTCAGATCCATGGTTCCCAGATGTCAAGTTGTTTCAGGTTGTGGACCTGATTACTGGACTGGACAAAATTGCCGAGACGAAAATTCCTATGTTGGTTTGTGGAGATTTCAACTCTGTTCCTCTGAGTGCGCCTCATCAGTTCATAACTACTCGCAAACTTGGCAAACTTCCTGATTATGATCCATATAGAATAAGTCAGCATCTAAAGCCTGACCATTCATTGCCTCTGAAAAGTGCATATGCATCTTTTTATAACTCGGATGGTGTCGAGGAGAAACAGTGTAGAAAGTTCTGTTCTGAAAGCGGGGAGCCTATGTTCACACACTCGACAAAACGTTTCCAAGGAACCCTAGATTACATATTCTATACAGAGGATAGTTTGATACTTGATGGTGTGTTGGAGCTACTTGACCATGATGACTTGGGTGCTGGAATTCCATCTCCTAGTTGGTCATCAGATCATATTGCCCTCATGGTGCGTTTTATTCTTAATCCAACCGTTCTGCAACAGGGCTCCTGCGCAGTTCTTCCTAAAGACCTTTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
Exo_endo_phos zf-C6H2

Protein Analysis

647

Amino Acids

73.02

Weight (kDa)

6.08

Isoelectric Point (pI)

43.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C6H2 PF15801 103 - 141 4.2e-06 zf-MYND-like zinc finger, mRNA-binding
Exo_endo_phos PF03372 264 - 619 5.5e-23 Endonuclease/Exonuclease/phosphatase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1647
Acc16I TGCGCA 1 cut(s) 1915
Acc36I ACCTGC 1 cut(s) 361
AccB1I GGYRCC 1 cut(s) 131
AccB7I CCANNNNNTGG 1 cut(s) 158
AciI CCGC 5 cut(s) 26, 429, 461, 771, 1698
AclI AACGTT 1 cut(s) 1729
AclWI GGATC 4 cut(s) 12, 92, 1394, 1568
AcoI YGGCCR 1 cut(s) 378
AcsI RAATTY 4 cut(s) 886, 962, 1476, 1827
AcuI CTGAAG 4 cut(s) 231, 365, 1217, 1310
AfaI GTAC 4 cut(s) 216, 677, 942, 949
AjnI CCWGG 1 cut(s) 79
AjuI GAANNNNNNNTTGG 2 cut(s) 141, 173
AloI GAACNNNNNNTCC 2 cut(s) 1694, 1726
Alw21I GWGCWC 3 cut(s) 228, 517, 551
Alw26I GTCTC 4 cut(s) 119, 653, 1017, 1463
AlwI GGATC 4 cut(s) 12, 92, 1394, 1568
AlwNI CAGNNNCTG 1 cut(s) 668
Ama87I CYCGRG 2 cut(s) 221, 956
AoxI GGCC 2 cut(s) 378, 485
ApeKI GCWGC 5 cut(s) 162, 588, 699, 1181, 1201
ApoI RAATTY 4 cut(s) 886, 962, 1476, 1827
Asp700I GAANNNNTTC 2 cut(s) 965, 1278
AspLEI GCGC 2 cut(s) 1525, 1916
AspS9I GGNCC 2 cut(s) 529, 1438
AsuC2I CCSGG 1 cut(s) 392
AsuHPI GGTGA 1 cut(s) 163
AvaI CYCGRG 2 cut(s) 221, 956
AvaII GGWCC 2 cut(s) 529, 1438
BaeGI GKGCMC 3 cut(s) 134, 644, 1346
BaeI ACNNNNGTAYC 2 cut(s) 198, 231
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 1 cut(s) 131
BanII GRGCYC 1 cut(s) 1910
BauI CACGAG 1 cut(s) 320
BbsI GAAGAC 2 cut(s) 585, 923
Bbv12I GWGCWC 3 cut(s) 228, 517, 551
BbvI GCAGC 5 cut(s) 149, 600, 686, 1193, 1213
BccI CCATC 8 cut(s) 212, 494, 662, 821, 1049, 1649, 1778, 1840
BceAI ACGGC 3 cut(s) 365, 393, 1062
BciT130I CCWGG 1 cut(s) 81
BciVI GTATCC 1 cut(s) 986
BclI TGATCA 1 cut(s) 189
BcnI CCSGG 1 cut(s) 392
BcoDI GTCTC 4 cut(s) 119, 653, 1017, 1463
BfaI CTAG 4 cut(s) 893, 1365, 1745, 1839
BfmI CTRYAG 3 cut(s) 163, 177, 609
BfuAI ACCTGC 1 cut(s) 361
BfuI GTATCC 1 cut(s) 986
BisI GCNGC 5 cut(s) 163, 589, 700, 1182, 1202
BlsI GCNGC 5 cut(s) 164, 590, 701, 1183, 1203
BmcAI AGTACT 1 cut(s) 949
Bme1390I CCNGG 2 cut(s) 81, 392
Bme18I GGWCC 2 cut(s) 529, 1438
BmeT110I CYCGRG 2 cut(s) 221, 956
BmgT120I GGNCC 2 cut(s) 529, 1438
BmiI GGNNCC 6 cut(s) 6, 133, 1409, 1704, 1741, 1909
BmrFI CCNGG 2 cut(s) 81, 392
BmsI GCATC 8 cut(s) 430, 449, 588, 904, 1072, 1168, 1603, 1646
BpiI GAAGAC 2 cut(s) 585, 923
BplI GAGNNNNNCTC 6 cut(s) 499, 531, 533, 565, 1510, 1542
BpuEI CTTGAG 3 cut(s) 666, 728, 1245
BpuMI CCSGG 1 cut(s) 392
BsaBI GATNNNNATC 2 cut(s) 9, 1572
BsaJI CCNNGG 5 cut(s) 79, 357, 583, 1403, 1735
BsaXI ACNNNNNCTCC 4 cut(s) 1658, 1688, 1694, 1724
Bse1I ACTGG 4 cut(s) 152, 1335, 1453, 1458
Bse3DI GCAATG 4 cut(s) 370, 1045, 1250, 1613
Bse8I GATNNNNATC 2 cut(s) 9, 1572
BseBI CCWGG 1 cut(s) 81
BseDI CCNNGG 5 cut(s) 79, 357, 583, 1403, 1735
BseGI GGATG 4 cut(s) 10, 921, 1060, 1660
BseJI GATNNNNATC 2 cut(s) 9, 1572
BseMI GCAATG 4 cut(s) 370, 1045, 1250, 1613
BseMII CTCAG 4 cut(s) 503, 966, 1124, 1508
BseNI ACTGG 4 cut(s) 152, 1335, 1453, 1458
BseRI GAGGAG 1 cut(s) 1679
BseSI GKGCMC 3 cut(s) 134, 644, 1346
BseX3I CGGCCG 1 cut(s) 378
BseXI GCAGC 5 cut(s) 149, 600, 686, 1193, 1213
BsgI GTGCAG 1 cut(s) 310
Bsh1285I CGRYCG 1 cut(s) 381
BshFI GGCC 2 cut(s) 380, 487
BshNI GGYRCC 1 cut(s) 131
BsiEI CGRYCG 1 cut(s) 381
BsiHKAI GWGCWC 3 cut(s) 228, 517, 551
BsiHKCI CYCGRG 2 cut(s) 221, 956
BsiSI CCGG 2 cut(s) 391, 768
BslFI GGGAC 2 cut(s) 407, 743
BsmAI GTCTC 4 cut(s) 119, 653, 1017, 1463
BsmBI CGTCTC 1 cut(s) 1463
BsmFI GGGAC 2 cut(s) 407, 743
BsmI GAATGC 2 cut(s) 1085, 1356
BsnI GGCC 2 cut(s) 380, 487
BsoBI CYCGRG 2 cut(s) 221, 956
Bsp1286I GDGCHC 7 cut(s) 134, 228, 517, 551, 644, 1346, 1910
Bsp143I GATC 7 cut(s) 4, 97, 189, 900, 1399, 1573, 1852
Bsp19I CCATGG 1 cut(s) 1403
BspACI CCGC 5 cut(s) 26, 429, 461, 771, 1698
BspANI GGCC 2 cut(s) 380, 487
BspCNI CTCAG 4 cut(s) 502, 967, 1125, 1509
BspHI TCATGA 1 cut(s) 823
BspLI GGNNCC 6 cut(s) 6, 133, 1409, 1704, 1741, 1909
BspMAI CTGCAG 1 cut(s) 167
BspMI ACCTGC 1 cut(s) 361
BspPI GGATC 4 cut(s) 12, 92, 1394, 1568
BspQI GCTCTTC 2 cut(s) 522, 556
BspT107I GGYRCC 1 cut(s) 131
BsrDI GCAATG 4 cut(s) 370, 1045, 1250, 1613
BsrI ACTGG 4 cut(s) 152, 1335, 1453, 1458
BssECI CCNNGG 5 cut(s) 79, 357, 583, 1403, 1735
BssMI GATC 7 cut(s) 4, 97, 189, 900, 1399, 1573, 1852
BssSI CACGAG 1 cut(s) 320
BssT1I CCWWGG 4 cut(s) 357, 583, 1403, 1735
Bst2BI CACGAG 1 cut(s) 320
Bst2UI CCWGG 1 cut(s) 81
Bst4CI ACNGT 5 cut(s) 113, 664, 1043, 1674, 1894
Bst6I CTCTTC 3 cut(s) 522, 556, 769
BstC8I GCNNGC 3 cut(s) 485, 849, 1113
BstDEI CTNAG 5 cut(s) 489, 944, 975, 1133, 1517
BstDSI CCRYGG 1 cut(s) 1403
BstF5I GGATG 4 cut(s) 10, 921, 1060, 1660
BstHHI GCGC 2 cut(s) 1525, 1916
BstKTI GATC 7 cut(s) 7, 100, 192, 903, 1402, 1576, 1855
BstMAI GTCTC 4 cut(s) 119, 653, 1017, 1463
BstMBI GATC 7 cut(s) 4, 97, 189, 900, 1399, 1573, 1852
BstMCI CGRYCG 1 cut(s) 381
BstMWI GCNNNNNNNGC 6 cut(s) 437, 1201, 1247, 1294, 1554, 1600
BstNI CCWGG 1 cut(s) 81
BstSCI CCNGG 2 cut(s) 79, 390
BstSFI CTRYAG 3 cut(s) 163, 177, 609
BstSLI GKGCMC 3 cut(s) 134, 644, 1346
BstV1I GCAGC 5 cut(s) 149, 600, 686, 1193, 1213
BstV2I GAAGAC 2 cut(s) 585, 923
BstX2I RGATCY 2 cut(s) 4, 1399
BstXI CCANNNNNNTGG 1 cut(s) 855
BstYI RGATCY 2 cut(s) 4, 1399
BstZI CGGCCG 1 cut(s) 378
BsuI GTATCC 1 cut(s) 986
BsuRI GGCC 2 cut(s) 380, 487
BtgI CCRYGG 1 cut(s) 1403
BtsCI GGATG 4 cut(s) 10, 921, 1060, 1660
BtsI GCAGTG 1 cut(s) 298
BtsIMutI CAGTG 3 cut(s) 207, 298, 1679
BveI ACCTGC 1 cut(s) 361
Cac8I GCNNGC 3 cut(s) 485, 849, 1113
CaiI CAGNNNCTG 1 cut(s) 668
CciI TCATGA 1 cut(s) 823
CfoI GCGC 2 cut(s) 1525, 1916
Cfr13I GGNCC 2 cut(s) 529, 1438
Csp6I GTAC 4 cut(s) 215, 676, 941, 948
CviAII CATG 6 cut(s) 824, 1051, 1205, 1404, 1808, 1867
CviQI GTAC 4 cut(s) 215, 676, 941, 948
DdeI CTNAG 5 cut(s) 489, 944, 975, 1133, 1517
DpnI GATC 7 cut(s) 6, 99, 191, 902, 1401, 1575, 1854
DpnII GATC 7 cut(s) 4, 97, 189, 900, 1399, 1573, 1852
EaeI YGGCCR 1 cut(s) 378
EagI CGGCCG 1 cut(s) 378
Eam1104I CTCTTC 3 cut(s) 522, 556, 769
EarI CTCTTC 3 cut(s) 522, 556, 769
EclXI CGGCCG 1 cut(s) 378
Eco130I CCWWGG 4 cut(s) 357, 583, 1403, 1735
Eco24I GRGCYC 1 cut(s) 1910
Eco47I GGWCC 2 cut(s) 529, 1438
Eco52I CGGCCG 1 cut(s) 378
Eco57I CTGAAG 4 cut(s) 231, 365, 1217, 1310
Eco88I CYCGRG 2 cut(s) 221, 956
EcoRI GAATTC 1 cut(s) 1827
EcoRII CCWGG 1 cut(s) 79
EcoT14I CCWWGG 4 cut(s) 357, 583, 1403, 1735
EcoT22I ATGCAT 2 cut(s) 1087, 1639
EcoT38I GRGCYC 1 cut(s) 1910
ErhI CCWWGG 4 cut(s) 357, 583, 1403, 1735
Esp3I CGTCTC 1 cut(s) 1463
FaeI CATG 6 cut(s) 827, 1054, 1208, 1407, 1811, 1870
FaqI GGGAC 2 cut(s) 407, 743
FatI CATG 6 cut(s) 823, 1050, 1204, 1403, 1807, 1866
FauI CCCGC 2 cut(s) 19, 1691
FauNDI CATATG 1 cut(s) 1633
FbaI TGATCA 1 cut(s) 189
Fnu4HI GCNGC 5 cut(s) 163, 589, 700, 1182, 1202
FokI GGATG 3 cut(s) 908, 1067, 1667
FriOI GRGCYC 1 cut(s) 1910
Fsp4HI GCNGC 5 cut(s) 163, 589, 700, 1182, 1202
FspBI CTAG 4 cut(s) 893, 1365, 1745, 1839
FspI TGCGCA 1 cut(s) 1915
GlaI GCGC 2 cut(s) 1524, 1915
GluI GCNGC 5 cut(s) 163, 589, 700, 1182, 1202
HaeIII GGCC 2 cut(s) 380, 487
HapII CCGG 2 cut(s) 391, 768
HhaI GCGC 2 cut(s) 1525, 1916
Hin1II CATG 6 cut(s) 827, 1054, 1208, 1407, 1811, 1870
Hin6I GCGC 2 cut(s) 1523, 1914
HinP1I GCGC 2 cut(s) 1523, 1914
HindIII AAGCTT 1 cut(s) 1275
HinfI GANTC 5 cut(s) 168, 620, 731, 1208, 1368
HpaII CCGG 2 cut(s) 391, 768
HphI GGTGA 1 cut(s) 163
Hpy166II GTNNAC 3 cut(s) 298, 1438, 1713
Hpy188III TCNNGA 9 cut(s) 105, 521, 658, 824, 935, 956, 958, 1262, 1565
Hpy8I GTNNAC 3 cut(s) 298, 1438, 1713
HpyAV CCTTC 2 cut(s) 111, 1163
HpyCH4III ACNGT 5 cut(s) 113, 664, 1043, 1674, 1894
HpyCH4IV ACGT 2 cut(s) 139, 1729
HpyF10VI GCNNNNNNNGC 6 cut(s) 437, 1201, 1247, 1294, 1554, 1600
HpyF3I CTNAG 5 cut(s) 489, 944, 975, 1133, 1517
HpySE526I ACGT 2 cut(s) 139, 1729
Hsp92II CATG 6 cut(s) 827, 1054, 1208, 1407, 1811, 1870
HspAI GCGC 2 cut(s) 1523, 1914
Ksp22I TGATCA 1 cut(s) 189
Kzo9I GATC 7 cut(s) 4, 97, 189, 900, 1399, 1573, 1852
LguI GCTCTTC 2 cut(s) 522, 556
LmnI GCTCC 4 cut(s) 749, 1702, 1795, 1913
Lsp1109I GCAGC 5 cut(s) 149, 600, 686, 1193, 1213
LweI GCATC 8 cut(s) 430, 449, 588, 904, 1072, 1168, 1603, 1646
MaeI CTAG 4 cut(s) 893, 1365, 1745, 1839
MaeII ACGT 2 cut(s) 139, 1729
MaeIII GTNAC 4 cut(s) 365, 386, 604, 1037
MalI GATC 7 cut(s) 6, 99, 191, 902, 1401, 1575, 1854
MboI GATC 7 cut(s) 4, 97, 189, 900, 1399, 1573, 1852
MflI RGATCY 2 cut(s) 4, 1399
MhlI GDGCHC 7 cut(s) 134, 228, 517, 551, 644, 1346, 1910
MlyI GAGTC 2 cut(s) 725, 1217
MmeI TCCRAC 3 cut(s) 960, 1773, 1913
Mph1103I ATGCAT 2 cut(s) 1087, 1639
MroXI GAANNNNTTC 2 cut(s) 965, 1278
MseI TTAA 3 cut(s) 263, 863, 1884
MspA1I CMGCKG 2 cut(s) 461, 614
MspI CCGG 2 cut(s) 391, 768
MspR9I CCNGG 2 cut(s) 81, 392
Mva1269I GAATGC 2 cut(s) 1085, 1356
MvaI CCWGG 1 cut(s) 81
MwoI GCNNNNNNNGC 6 cut(s) 437, 1201, 1247, 1294, 1554, 1600
NciI CCSGG 1 cut(s) 392
NcoI CCATGG 1 cut(s) 1403
NdeI CATATG 1 cut(s) 1633
NdeII GATC 7 cut(s) 4, 97, 189, 900, 1399, 1573, 1852
NlaIII CATG 6 cut(s) 827, 1054, 1208, 1407, 1811, 1870
NlaIV GGNNCC 6 cut(s) 6, 133, 1409, 1704, 1741, 1909
NmeAIII GCCGAG 1 cut(s) 1492
NsbI TGCGCA 1 cut(s) 1915
NsiI ATGCAT 2 cut(s) 1087, 1639
PaeR7I CTCGAG 1 cut(s) 956
PagI TCATGA 1 cut(s) 823
PciSI GCTCTTC 2 cut(s) 522, 556
PctI GAATGC 2 cut(s) 1085, 1356
PdmI GAANNNNTTC 2 cut(s) 965, 1278
PfeI GAWTC 3 cut(s) 168, 620, 1368
PflMI CCANNNNNTGG 1 cut(s) 158
PkrI GCNGC 5 cut(s) 164, 590, 701, 1183, 1203
PleI GAGTC 2 cut(s) 725, 1216
PpsI GAGTC 2 cut(s) 725, 1216
PsiI TTATAA 1 cut(s) 1647
Psp1406I AACGTT 1 cut(s) 1729
Psp6I CCWGG 1 cut(s) 79
PspGI CCWGG 1 cut(s) 79
PspN4I GGNNCC 6 cut(s) 6, 133, 1409, 1704, 1741, 1909
PspPI GGNCC 2 cut(s) 529, 1438
PstI CTGCAG 1 cut(s) 167
PstNI CAGNNNCTG 1 cut(s) 668
PsuI RGATCY 2 cut(s) 4, 1399
PvuII CAGCTG 1 cut(s) 614
RsaI GTAC 4 cut(s) 216, 677, 942, 949
RsaNI GTAC 4 cut(s) 215, 676, 941, 948
SapI GCTCTTC 2 cut(s) 522, 556
SaqAI TTAA 3 cut(s) 263, 863, 1884
SatI GCNGC 5 cut(s) 163, 589, 700, 1182, 1202
Sau3AI GATC 7 cut(s) 4, 97, 189, 900, 1399, 1573, 1852
Sau96I GGNCC 2 cut(s) 529, 1438
ScaI AGTACT 1 cut(s) 949
SchI GAGTC 2 cut(s) 725, 1217
ScrFI CCNGG 2 cut(s) 81, 392
SduI GDGCHC 7 cut(s) 134, 228, 517, 551, 644, 1346, 1910
SfaNI GCATC 8 cut(s) 430, 449, 588, 904, 1072, 1168, 1603, 1646
SfcI CTRYAG 3 cut(s) 163, 177, 609
Sfr274I CTCGAG 1 cut(s) 956
SinI GGWCC 2 cut(s) 529, 1438
SlaI CTCGAG 1 cut(s) 956
SmlI CTYRAG 4 cut(s) 681, 707, 956, 1260
SmoI CTYRAG 4 cut(s) 681, 707, 956, 1260
SsiI CCGC 5 cut(s) 26, 429, 461, 771, 1698
SspMI CTAG 4 cut(s) 893, 1365, 1745, 1839
StyD4I CCNGG 2 cut(s) 79, 390
StyI CCWWGG 4 cut(s) 357, 583, 1403, 1735
TaaI ACNGT 5 cut(s) 113, 664, 1043, 1674, 1894
TaiI ACGT 2 cut(s) 142, 1732
TaqI TCGA 4 cut(s) 657, 957, 1662, 1721
TatI WGTACW 1 cut(s) 947
TfiI GAWTC 3 cut(s) 168, 620, 1368
Tru1I TTAA 3 cut(s) 263, 863, 1884
Tru9I TTAA 3 cut(s) 263, 863, 1884
TscAI CASTG 3 cut(s) 214, 298, 1679
TseI GCWGC 5 cut(s) 162, 588, 699, 1181, 1201
TspDTI ATGAA 3 cut(s) 1287, 1525, 1602
TspGWI ACGGA 1 cut(s) 1240
TspRI CASTG 3 cut(s) 214, 298, 1679
Van91I CCANNNNNTGG 1 cut(s) 158
VpaK11BI GGWCC 2 cut(s) 529, 1438
XapI RAATTY 4 cut(s) 886, 962, 1476, 1827
XcmI CCANNNNNNNNNTGG 1 cut(s) 1839
XhoI CTCGAG 1 cut(s) 956
XmnI GAANNNNTTC 2 cut(s) 965, 1278
XspI CTAG 4 cut(s) 893, 1365, 1745, 1839
ZrmI AGTACT 1 cut(s) 949
Zsp2I ATGCAT 2 cut(s) 1087, 1639
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.