Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0001088

Physical Location & Seq

Genomic Coordinates Reverse (-)

5946462 .. 5953105

Gene Structure 6644 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1053300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1812 bp

ATGCTGAGCGTGCTACGCGTGCACCTCCCTTCGGACATTCCCATTGTAGGCTGCGAGCTCACGCCATACGTGCTTCTGCGCCGGCCTGACAAGGATGTCACGACAGACGATGTGCCAGAGTCGGCCCCTCTTGATGGCCACTTCTTGAGGTACAAGTGGTATCGTATACAAAGTGATAAAAAAGTTGCTATCTGTAGTGTACATCCATCTGAGCAAGCCACATTGCAGTGTCTAGGTTGTGTTAAGGCCAAAATACCTGTTTCAAAAAGTTACCATTGTTCACCTAAGTGCTTCTCGGACGCGTGGCAGCATCACCGTGTTTTGCATGATCGTGCTGCTAGTGCTGTAAATGAAAATGGAAATGAGGAAGAAGAGGTGTTTGGACGCTTCAATAGCTCTGGATCTGGAGTTCTTAACACTAGCTTATCTGGTTCCGTGTCAAGCACGAGTTTGACAAATGGTTCAGCACCTTTATATCCTGCAGCTGTTACACAAAGGAGTGGTGGTGAAACATGGTTTGAAGTGGGCCGCTCTAAAACATATACACCAACAGCTGATGATATTGGGCATGTTCTAAAGTTTGAGTGTGTTGTGGTTGATGCTGAATCAAAAGTACCTGTGGGACATGTCAATACCATATTAACTTCCCGTGTCATTCCAGCACCTTCTCCAAGTCCACGCCGTCTGGTTCCTGTCAATGGAGTTGACGTGATGGGGCATTTAGATTCAGATGGCCGTATTTCTTCTTCTGGAACTTTTACTGTGCTTTCATACAACATTTTGTCTGATGTGTATGCCACCAGTGAATCATACAGTTACTGCCCTTCATGGGCACTTTCTTGGCCATACCGCAGACAAAATTTGCTGCGGGAAATTGTTGGTTATCGCGCAGATATTGTTTGTCTCCAGGAGGTTCAAAGTGATCATTTCGAGGAATTTTTTGCCCCCGAGCTGGACAAACATGGTTATCAAGCACTATACAAGAGAAAAACAAATGAGGTTTACAATGGAAACACACAAACAATTGATGGTTGCGCAACATTTTTCCGTAGAGACAGATTTTCACATGTCAAAAAATATGAGGTTGAGTTTAATAAGGCTGCTCAGTCCTTGACTGATGCCATGATTCCAAGTAATCAGAAGAAAAGTGCTTTAAATCGATTAGTTAAGGATAATGTTGCTCTCATAGTGGTTCTGGAAGCAAAATTCAGCAATCAGGGAGCTGATAATCCTGGGAAACGGCAACTTCTTTGTGTGGCAAATACACATGTAAATGTCCACCAAGACCTGAAGGATGTCAAACTCTGGCAGGTTCATACTCTCTTAAAAGGACTAGAGAAAATAGCTGCCAGTGCAGATATCCCGATGCTGGTGTGTGGGGATTTTAATTCAGTTCCTGGAAGCGCTCCTCATACACTTCTGGCTATGGGAAAGGTAGATCCATTGCATCCGGATTTACAAGTAGATCCTCTTAATATATTGCGCCCTCTCAGCAAGCTGATACATCAGCTGCCACTGGTTAGTGCATATTCATCATTTGCAAGATTGGGGGTTGGTCTTGGGATGGAGCAGCAGAGAAGGAGGATGGATCCCACCACAAATGAGCCGTTATTTACAAATTGCACTAGAGATTTCATTGGTACCCTAGATTACATATTCTACACTGCTGACTCCTTAACAGTGGAGTCCTTGTTGGAGCTCTTGGATGAGGAAAGCTTAAGGAAAGACACGGCTCTTCCTTCTCCAGAGTGGTCATCAGATCACATTGCACTTTTAGCCGAGTTTCGCTGCAAGCCTAGAATTAGACGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000932 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005976 GO:0005982 GO:0005984 GO:0005985 GO:0005986 GO:0006073 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009311 GO:0009312 GO:0009987 GO:0010467 GO:0016051 GO:0016070 GO:0016071 GO:0019252 GO:0032991 GO:0033692 GO:0034637 GO:0034641 GO:0034645 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046351 GO:0046483 GO:0071704 GO:0090304 GO:1901360 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

Exo_endo_phos zf-C6H2

Protein Analysis

604

Amino Acids

67.1

Weight (kDa)

6.58

Isoelectric Point (pI)

40.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-C6H2	PF15801	72 - 110	2.9e-06	zf-MYND-like zinc finger, mRNA-binding
Exo_endo_phos	PF03372	256 - 588	4.4e-26	Endonuclease/Exonuclease/phosphatase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001088)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G58560 AT3G58580
fragaria_vesca	FvH4_5g37360 FvH4_5g37360 FvH4_5g37650 FvH4_6g21630 FvH4_6g21630 FvH4_6g21630 FvH4_6g21630 FvH4_6g21630
malus_domestica	MD08G1182500.v1.1 MD12G1053300.v1.1 MD14G1051700.v1.1 MD15G1368200.v1.1 MD15G1368500.v1.1
prunus_persica	Prupe.1G516400_v2.0.a1 Prupe.1G516400_v2.0.a1 Prupe.1G516400_v2.0.a1 Prupe.7G084300_v2.0.a1
pyrus_communis	pycom08g15630 pycom15g33010 pycom15g33030
rosa_chinensis	RchiOBHm_Chr3g0478881 RchiOBHm_Chr7g0227401 RchiOBHm_Chr7g0239031
rosa_laevigata	RLG00000000789 RLG00000001657 RLG00000023618
rosa_multiflora	Rmu_sc0000868.1_g000004 Rmu_sc0004831.1_g000003 Rmu_sc0005651.1_g000003 Rmu_sc0005751.1_g000015
rosa_roxburghii	Rroxscaffold_3G00221350 Rroxscaffold_3G00237900 Rroxscaffold_3G00237980 Rroxscaffold_3G00238050 Rroxscaffold_5G00332920 Rroxscaffold_6G00403000 Rroxscaffold_6G00413120 Rroxscaffold_7G00214960
rosa_rugosa	Rorug03G0168800 Rorug03G0168900 Rorug07G0324800
rosa_samantha	Rh2DG401300 Rh3AG220500 Rh3BG252400 Rh3CG249200 Rh3DG245400 Rh6AG177800 Rh7AG393200 Rh7AG479600 Rh7BG452100 Rh7CG412400 Rh7CG497100 Rh7DG464600
rosa_wichuraiana	Rw2G030830 Rw3G019830 Rw6G015170 Rw7G040100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	95
Acc16I	TGCGCA	1 cut(s)	1036
Acc36I	ACCTGC	1 cut(s)	1300
Acc65I	GGTACC	1 cut(s)	1640
AccB1I	GGYRCC	1 cut(s)	1640
AccBSI	CCGCTC	1 cut(s)	531
AccI	GTMKAC	1 cut(s)	166
AccII	CGCG	3 cut(s)	18, 302, 888
AccIII	TCCGGA	1 cut(s)	1450
AciI	CCGC	3 cut(s)	529, 850, 868
AclWI	GGATC	5 cut(s)	409, 1433, 1460, 1583, 1596
AcoI	YGGCCR	3 cut(s)	136, 733, 842
AcsI	RAATTY	3 cut(s)	859, 935, 1205
AcuI	CTGAAG	1 cut(s)	1310
AfaI	GTAC	4 cut(s)	152, 201, 615, 1642
AfeI	AGCGCT	1 cut(s)	1405
AfiI	CCNNNNNNNGG	7 cut(s)	31, 47, 134, 698, 829, 952, 1369
AflII	CTTAAG	1 cut(s)	1717
AflIII	ACRYGT	5 cut(s)	16, 300, 625, 1066, 1267
AgsI	TTSAA	4 cut(s)	264, 391, 521, 917
AjiI	CACGTC	1 cut(s)	709
AjnI	CCWGG	3 cut(s)	906, 1231, 1396
AjuI	GAANNNNNNNTTGG	2 cut(s)	363, 395
AleI	CACNNNNGTG	1 cut(s)	286
AloI	GAACNNNNNNTCC	2 cut(s)	393, 425
Alw21I	GWGCWC	3 cut(s)	24, 60, 1701
Alw26I	GTCTC	2 cut(s)	908, 1047
Alw44I	GTGCAC	1 cut(s)	20
AlwI	GGATC	5 cut(s)	409, 1433, 1460, 1583, 1596
AlwNI	CAGNNNCTG	2 cut(s)	819, 1397
Ama87I	CYCGRG	1 cut(s)	947
Aor13HI	TCCGGA	1 cut(s)	1450
Aor51HI	AGCGCT	1 cut(s)	1405
AoxI	GGCC	7 cut(s)	83, 123, 136, 246, 526, 733, 842
ApaLI	GTGCAC	1 cut(s)	20
ApoI	RAATTY	3 cut(s)	859, 935, 1205
Asp718I	GGTACC	1 cut(s)	1640
AspLEI	GCGC	5 cut(s)	81, 890, 1037, 1406, 1485
AspS9I	GGNCC	2 cut(s)	124, 526
AsuHPI	GGTGA	3 cut(s)	273, 305, 518
AvaI	CYCGRG	1 cut(s)	947
BaeGI	GKGCMC	2 cut(s)	24, 835
BalI	TGGCCA	2 cut(s)	138, 844
BamHI	GGATCC	1 cut(s)	1588
BanI	GGYRCC	1 cut(s)	1640
BanII	GRGCYC	2 cut(s)	60, 1701
BarI	GAAGNNNNNNTAC	2 cut(s)	730, 762
BauI	CACGAG	1 cut(s)	445
Bbv12I	GWGCWC	3 cut(s)	24, 60, 1701
BccI	CCATC	7 cut(s)	128, 214, 706, 725, 1022, 1558, 1579
BceAI	ACGGC	5 cut(s)	666, 720, 1256, 1591, 1746
BciT130I	CCWGG	3 cut(s)	908, 1233, 1398
BclI	TGATCA	1 cut(s)	922
BcoDI	GTCTC	2 cut(s)	908, 1047
BfaI	CTAG	7 cut(s)	233, 339, 420, 1334, 1626, 1646, 1797
BfmI	CTRYAG	2 cut(s)	193, 480
BfoI	RGCGCY	1 cut(s)	1407
BfrI	CTTAAG	1 cut(s)	1717
BfuAI	ACCTGC	1 cut(s)	1300
BlpI	GCTNAGC	1 cut(s)	5
Bme1390I	CCNGG	3 cut(s)	908, 1233, 1398
BmeT110I	CYCGRG	1 cut(s)	947
BmgBI	CACGTC	1 cut(s)	709
BmgT120I	GGNCC	2 cut(s)	124, 526
BmiI	GGNNCC	5 cut(s)	126, 433, 690, 1590, 1642
BmrFI	CCNGG	3 cut(s)	908, 1233, 1398
BmsI	GCATC	5 cut(s)	319, 589, 1108, 1356, 1456
BpmI	CTGGAG	3 cut(s)	426, 890, 1728
Bpu1102I	GCTNAGC	1 cut(s)	5
BpuEI	CTTGAG	1 cut(s)	166
Bsa29I	ATCGAT	1 cut(s)	1159
BsaAI	YACGTR	1 cut(s)	70
BsaJI	CCNNGG	1 cut(s)	1232
BsaWI	WCCGGW	1 cut(s)	1450
BsaXI	ACNNNNNCTCC	6 cut(s)	490, 520, 693, 723, 1676, 1706
Bsc4I	CCNNNNNNNGG	7 cut(s)	31, 47, 134, 698, 829, 952, 1369
Bse118I	RCCGGY	1 cut(s)	81
Bse1I	ACTGG	3 cut(s)	801, 1350, 1521
Bse3DI	GCAATG	3 cut(s)	221, 1442, 1764
BseAI	TCCGGA	1 cut(s)	1450
BseBI	CCWGG	3 cut(s)	908, 1233, 1398
BseCI	ATCGAT	1 cut(s)	1159
BseDI	CCNNGG	1 cut(s)	1232
BseGI	GGATG	7 cut(s)	100, 202, 1300, 1447, 1569, 1590, 1711
BseLI	CCNNNNNNNGG	7 cut(s)	31, 47, 134, 698, 829, 952, 1369
BseMI	GCAATG	3 cut(s)	221, 1442, 1764
BseMII	CTCAG	3 cut(s)	201, 1118, 1504
BseNI	ACTGG	3 cut(s)	801, 1350, 1521
BseRI	GAGGAG	1 cut(s)	1398
BseSI	GKGCMC	2 cut(s)	24, 835
BsgI	GTGCAG	1 cut(s)	1374
Bsh1236I	CGCG	3 cut(s)	18, 302, 888
BshFI	GGCC	7 cut(s)	85, 125, 138, 248, 528, 735, 844
BshNI	GGYRCC	1 cut(s)	1640
BshVI	ATCGAT	1 cut(s)	1159
BsiHKAI	GWGCWC	3 cut(s)	24, 60, 1701
BsiHKCI	CYCGRG	1 cut(s)	947
BsiSI	CCGG	2 cut(s)	82, 1451
BslFI	GGGAC	1 cut(s)	636
BslI	CCNNNNNNNGG	7 cut(s)	31, 47, 134, 698, 829, 952, 1369
BsmAI	GTCTC	2 cut(s)	908, 1047
BsmFI	GGGAC	1 cut(s)	636
BsnI	GGCC	7 cut(s)	85, 125, 138, 248, 528, 735, 844
BsoBI	CYCGRG	1 cut(s)	947
Bsp1286I	GDGCHC	4 cut(s)	24, 60, 835, 1701
Bsp13I	TCCGGA	1 cut(s)	1450
Bsp1407I	TGTACA	1 cut(s)	199
Bsp143I	GATC	7 cut(s)	328, 401, 922, 1438, 1465, 1588, 1759
Bsp1720I	GCTNAGC	1 cut(s)	5
BspACI	CCGC	3 cut(s)	529, 850, 868
BspANI	GGCC	7 cut(s)	85, 125, 138, 248, 528, 735, 844
BspCNI	CTCAG	3 cut(s)	202, 1117, 1503
BspDI	ATCGAT	1 cut(s)	1159
BspEI	TCCGGA	1 cut(s)	1450
BspFNI	CGCG	3 cut(s)	18, 302, 888
BspLI	GGNNCC	5 cut(s)	126, 433, 690, 1590, 1642
BspMAI	CTGCAG	1 cut(s)	484
BspMI	ACCTGC	1 cut(s)	1300
BspPI	GGATC	5 cut(s)	409, 1433, 1460, 1583, 1596
BspQI	GCTCTTC	1 cut(s)	1740
BspT107I	GGYRCC	1 cut(s)	1640
BspTI	CTTAAG	1 cut(s)	1717
BsrBI	CCGCTC	1 cut(s)	531
BsrDI	GCAATG	3 cut(s)	221, 1442, 1764
BsrFI	RCCGGY	1 cut(s)	81
BsrGI	TGTACA	1 cut(s)	199
BsrI	ACTGG	3 cut(s)	801, 1350, 1521
BssAI	RCCGGY	1 cut(s)	81
BssECI	CCNNGG	1 cut(s)	1232
BssMI	GATC	7 cut(s)	328, 401, 922, 1438, 1465, 1588, 1759
BssNAI	GTATAC	1 cut(s)	167
BssSI	CACGAG	1 cut(s)	445
Bst1107I	GTATAC	1 cut(s)	167
Bst2BI	CACGAG	1 cut(s)	445
Bst2UI	CCWGG	3 cut(s)	908, 1233, 1398
Bst4CI	ACNGT	4 cut(s)	317, 763, 815, 1681
Bst6I	CTCTTC	2 cut(s)	366, 1740
BstAFI	CTTAAG	1 cut(s)	1717
BstAUI	TGTACA	1 cut(s)	199
BstBAI	YACGTR	1 cut(s)	70
BstC8I	GCNNGC	7 cut(s)	11, 20, 56, 83, 216, 1496, 1793
BstDEI	CTNAG	5 cut(s)	5, 210, 285, 1104, 1490
BstF5I	GGATG	7 cut(s)	100, 202, 1300, 1447, 1569, 1590, 1711
BstFNI	CGCG	3 cut(s)	18, 302, 888
BstH2I	RGCGCY	1 cut(s)	1407
BstHHI	GCGC	5 cut(s)	81, 890, 1037, 1406, 1485
BstKTI	GATC	7 cut(s)	331, 404, 925, 1441, 1468, 1591, 1762
BstMAI	GTCTC	2 cut(s)	908, 1047
BstMBI	GATC	7 cut(s)	328, 401, 922, 1438, 1465, 1588, 1759
BstMWI	GCNNNNNNNGC	9 cut(s)	10, 15, 19, 70, 341, 393, 1352, 1491, 1775
BstNI	CCWGG	3 cut(s)	908, 1233, 1398
BstNSI	RCATGY	4 cut(s)	572, 629, 1070, 1271
BstSCI	CCNGG	3 cut(s)	906, 1231, 1396
BstSFI	CTRYAG	2 cut(s)	193, 480
BstSLI	GKGCMC	2 cut(s)	24, 835
BstUI	CGCG	3 cut(s)	18, 302, 888
BstX2I	RGATCY	4 cut(s)	401, 1438, 1465, 1588
BstYI	RGATCY	4 cut(s)	401, 1438, 1465, 1588
BstZ17I	GTATAC	1 cut(s)	167
Bsu15I	ATCGAT	1 cut(s)	1159
BsuRI	GGCC	7 cut(s)	85, 125, 138, 248, 528, 735, 844
BsuTUI	ATCGAT	1 cut(s)	1159
BtrI	CACGTC	1 cut(s)	709
BtsCI	GGATG	7 cut(s)	100, 202, 1300, 1447, 1569, 1590, 1711
BtsI	GCAGTG	2 cut(s)	233, 1662
BtsIMutI	CAGTG	6 cut(s)	233, 808, 1357, 1514, 1662, 1686
BveI	ACCTGC	1 cut(s)	1300
Cac8I	GCNNGC	7 cut(s)	11, 20, 56, 83, 216, 1496, 1793
CaiI	CAGNNNCTG	2 cut(s)	819, 1397
CfoI	GCGC	5 cut(s)	81, 890, 1037, 1406, 1485
Cfr10I	RCCGGY	1 cut(s)	81
Cfr13I	GGNCC	2 cut(s)	124, 526
ClaI	ATCGAT	1 cut(s)	1159
CseI	GACGC	2 cut(s)	308, 393
Csp6I	GTAC	4 cut(s)	151, 200, 614, 1641
CviAII	CATG	9 cut(s)	326, 513, 569, 626, 828, 962, 1067, 1123, 1268
CviQI	GTAC	4 cut(s)	151, 200, 614, 1641
DdeI	CTNAG	5 cut(s)	5, 210, 285, 1104, 1490
DpnI	GATC	7 cut(s)	330, 403, 924, 1440, 1467, 1590, 1761
DpnII	GATC	7 cut(s)	328, 401, 922, 1438, 1465, 1588, 1759
DraI	TTTAAA	1 cut(s)	1155
DrdI	GACNNNNNNGTC	1 cut(s)	95
DseDI	GACNNNNNNGTC	1 cut(s)	95
EaeI	YGGCCR	3 cut(s)	136, 733, 842
Eam1104I	CTCTTC	2 cut(s)	366, 1740
EarI	CTCTTC	2 cut(s)	366, 1740
Ecl136II	GAGCTC	2 cut(s)	58, 1699
Eco24I	GRGCYC	2 cut(s)	60, 1701
Eco32I	GATATC	1 cut(s)	1360
Eco47III	AGCGCT	1 cut(s)	1405
Eco53kI	GAGCTC	2 cut(s)	58, 1699
Eco57I	CTGAAG	1 cut(s)	1310
Eco88I	CYCGRG	1 cut(s)	947
EcoICRI	GAGCTC	2 cut(s)	58, 1699
EcoRII	CCWGG	3 cut(s)	906, 1231, 1396
EcoRV	GATATC	1 cut(s)	1360
EcoT38I	GRGCYC	2 cut(s)	60, 1701
FaeI	CATG	9 cut(s)	329, 516, 572, 629, 831, 965, 1070, 1126, 1271
FaqI	GGGAC	1 cut(s)	636
FatI	CATG	9 cut(s)	325, 512, 568, 625, 827, 961, 1066, 1122, 1267
FauI	CCCGC	1 cut(s)	861
FbaI	TGATCA	1 cut(s)	922
FblI	GTMKAC	1 cut(s)	166
FokI	GGATG	7 cut(s)	107, 189, 1307, 1434, 1576, 1597, 1718
FriOI	GRGCYC	2 cut(s)	60, 1701
FspBI	CTAG	7 cut(s)	233, 339, 420, 1334, 1626, 1646, 1797
FspI	TGCGCA	1 cut(s)	1036
GlaI	GCGC	5 cut(s)	80, 889, 1036, 1405, 1484
GsuI	CTGGAG	3 cut(s)	426, 890, 1728
HaeII	RGCGCY	1 cut(s)	1407
HaeIII	GGCC	7 cut(s)	85, 125, 138, 248, 528, 735, 844
HapII	CCGG	2 cut(s)	82, 1451
HgaI	GACGC	2 cut(s)	308, 393
HhaI	GCGC	5 cut(s)	81, 890, 1037, 1406, 1485
Hin1II	CATG	9 cut(s)	329, 516, 572, 629, 831, 965, 1070, 1126, 1271
Hin6I	GCGC	5 cut(s)	79, 888, 1035, 1404, 1483
HinP1I	GCGC	5 cut(s)	79, 888, 1035, 1404, 1483
HincII	GTYRAC	1 cut(s)	706
HindII	GTYRAC	1 cut(s)	706
HindIII	AAGCTT	1 cut(s)	1714
HinfI	GANTC	7 cut(s)	119, 605, 725, 806, 1126, 1670, 1685
HpaII	CCGG	2 cut(s)	82, 1451
HphI	GGTGA	3 cut(s)	273, 305, 518
Hpy166II	GTNNAC	8 cut(s)	22, 167, 200, 281, 677, 706, 1003, 1279
Hpy188I	TCNGA	7 cut(s)	34, 211, 298, 730, 787, 1140, 1759
Hpy8I	GTNNAC	8 cut(s)	22, 167, 200, 281, 677, 706, 1003, 1279
HpyAV	CCTTC	6 cut(s)	39, 675, 834, 1285, 1572, 1749
HpyCH4III	ACNGT	4 cut(s)	317, 763, 815, 1681
HpyCH4IV	ACGT	3 cut(s)	69, 708, 1807
HpyF10VI	GCNNNNNNNGC	9 cut(s)	10, 15, 19, 70, 341, 393, 1352, 1491, 1775
HpyF3I	CTNAG	5 cut(s)	5, 210, 285, 1104, 1490
HpySE526I	ACGT	3 cut(s)	69, 708, 1807
Hsp92II	CATG	9 cut(s)	329, 516, 572, 629, 831, 965, 1070, 1126, 1271
HspAI	GCGC	5 cut(s)	79, 888, 1035, 1404, 1483
Kpn2I	TCCGGA	1 cut(s)	1450
KpnI	GGTACC	1 cut(s)	1644
KroI	GCCGGC	1 cut(s)	81
KroNI	GCCGGC	1 cut(s)	83
Ksp22I	TGATCA	1 cut(s)	922
Kzo9I	GATC	7 cut(s)	328, 401, 922, 1438, 1465, 1588, 1759
LguI	GCTCTTC	1 cut(s)	1740
LmnI	GCTCC	4 cut(s)	1220, 1411, 1567, 1696
LweI	GCATC	5 cut(s)	319, 589, 1108, 1356, 1456
MaeI	CTAG	7 cut(s)	233, 339, 420, 1334, 1626, 1646, 1797
MaeII	ACGT	3 cut(s)	69, 708, 1807
MaeIII	GTNAC	4 cut(s)	97, 269, 487, 815
MalI	GATC	7 cut(s)	330, 403, 924, 1440, 1467, 1590, 1761
MbiI	CCGCTC	1 cut(s)	531
MboI	GATC	7 cut(s)	328, 401, 922, 1438, 1465, 1588, 1759
MboII	GAAGA	6 cut(s)	380, 383, 735, 738, 1153, 1727
MfeI	CAATTG	1 cut(s)	1023
MflI	RGATCY	4 cut(s)	401, 1438, 1465, 1588
MhlI	GDGCHC	4 cut(s)	24, 60, 835, 1701
MlsI	TGGCCA	2 cut(s)	138, 844
MluCI	AATT	8 cut(s)	859, 873, 935, 1023, 1205, 1387, 1618, 1800
MluI	ACGCGT	2 cut(s)	16, 300
MluNI	TGGCCA	2 cut(s)	138, 844
MlyI	GAGTC	3 cut(s)	128, 1664, 1694
MmeI	TCCRAC	1 cut(s)	1674
Mox20I	TGGCCA	2 cut(s)	138, 844
MroI	TCCGGA	1 cut(s)	1450
MroNI	GCCGGC	1 cut(s)	81
MscI	TGGCCA	2 cut(s)	138, 844
MslI	CAYNNNNRTG	5 cut(s)	226, 286, 315, 330, 1272
Msp20I	TGGCCA	2 cut(s)	138, 844
MspA1I	CMGCKG	3 cut(s)	485, 554, 1510
MspCI	CTTAAG	1 cut(s)	1717
MspI	CCGG	2 cut(s)	82, 1451
MspR9I	CCNGG	3 cut(s)	908, 1233, 1398
MunI	CAATTG	1 cut(s)	1023
MvaI	CCWGG	3 cut(s)	908, 1233, 1398
MvnI	CGCG	3 cut(s)	18, 302, 888
MwoI	GCNNNNNNNGC	9 cut(s)	10, 15, 19, 70, 341, 393, 1352, 1491, 1775
NaeI	GCCGGC	1 cut(s)	83
NdeII	GATC	7 cut(s)	328, 401, 922, 1438, 1465, 1588, 1759
NgoMIV	GCCGGC	1 cut(s)	81
NlaIII	CATG	9 cut(s)	329, 516, 572, 629, 831, 965, 1070, 1126, 1271
NlaIV	GGNNCC	5 cut(s)	126, 433, 690, 1590, 1642
NmeAIII	GCCGAG	1 cut(s)	1804
NmuCI	GTSAC	1 cut(s)	97
NsbI	TGCGCA	1 cut(s)	1036
NspI	RCATGY	4 cut(s)	572, 629, 1070, 1271
OliI	CACNNNNGTG	1 cut(s)	286
PciI	ACATGT	3 cut(s)	625, 1066, 1267
PciSI	GCTCTTC	1 cut(s)	1740
PdiI	GCCGGC	1 cut(s)	83
PfeI	GAWTC	4 cut(s)	605, 725, 806, 1126
PfoI	TCCNGGA	2 cut(s)	906, 1396
PleI	GAGTC	3 cut(s)	127, 1664, 1693
PpsI	GAGTC	3 cut(s)	127, 1664, 1693
Ppu21I	YACGTR	1 cut(s)	70
PscI	ACATGT	3 cut(s)	625, 1066, 1267
Psp124BI	GAGCTC	2 cut(s)	60, 1701
Psp6I	CCWGG	3 cut(s)	906, 1231, 1396
PspGI	CCWGG	3 cut(s)	906, 1231, 1396
PspN4I	GGNNCC	5 cut(s)	126, 433, 690, 1590, 1642
PspPI	GGNCC	2 cut(s)	124, 526
PstI	CTGCAG	1 cut(s)	484
PstNI	CAGNNNCTG	2 cut(s)	819, 1397
PsuI	RGATCY	4 cut(s)	401, 1438, 1465, 1588
PvuII	CAGCTG	3 cut(s)	485, 554, 1510
RsaI	GTAC	4 cut(s)	152, 201, 615, 1642
RsaNI	GTAC	4 cut(s)	151, 200, 614, 1641
RseI	CAYNNNNRTG	5 cut(s)	226, 286, 315, 330, 1272
SacI	GAGCTC	2 cut(s)	60, 1701
SapI	GCTCTTC	1 cut(s)	1740
Sau3AI	GATC	7 cut(s)	328, 401, 922, 1438, 1465, 1588, 1759
Sau96I	GGNCC	2 cut(s)	124, 526
SchI	GAGTC	3 cut(s)	128, 1664, 1694
ScrFI	CCNGG	3 cut(s)	908, 1233, 1398
SduI	GDGCHC	4 cut(s)	24, 60, 835, 1701
SfaNI	GCATC	5 cut(s)	319, 589, 1108, 1356, 1456
SfcI	CTRYAG	2 cut(s)	193, 480
SmiMI	CAYNNNNRTG	5 cut(s)	226, 286, 315, 330, 1272
SmlI	CTYRAG	2 cut(s)	145, 1717
SmoI	CTYRAG	2 cut(s)	145, 1717
Sse9I	AATT	8 cut(s)	859, 873, 935, 1023, 1205, 1387, 1618, 1800
SsiI	CCGC	3 cut(s)	529, 850, 868
SspMI	CTAG	7 cut(s)	233, 339, 420, 1334, 1626, 1646, 1797
SstI	GAGCTC	2 cut(s)	60, 1701
StyD4I	CCNGG	3 cut(s)	906, 1231, 1396
TaaI	ACNGT	4 cut(s)	317, 763, 815, 1681
TaiI	ACGT	3 cut(s)	72, 711, 1810
TaqI	TCGA	2 cut(s)	930, 1159
TasI	AATT	8 cut(s)	859, 873, 935, 1023, 1205, 1387, 1618, 1800
TatI	WGTACW	1 cut(s)	199
TauI	GCSGC	1 cut(s)	531
TfiI	GAWTC	4 cut(s)	605, 725, 806, 1126
TscAI	CASTG	6 cut(s)	233, 808, 1357, 1521, 1669, 1686
TseFI	GTSAC	1 cut(s)	97
Tsp45I	GTSAC	1 cut(s)	97
TspDTI	ATGAA	6 cut(s)	366, 759, 816, 1304, 1521, 1624
TspGWI	ACGGA	2 cut(s)	424, 1037
TspRI	CASTG	6 cut(s)	233, 808, 1357, 1521, 1669, 1686
Vha464I	CTTAAG	1 cut(s)	1717
VneI	GTGCAC	1 cut(s)	20
XapI	RAATTY	3 cut(s)	859, 935, 1205
XceI	RCATGY	4 cut(s)	572, 629, 1070, 1271
XmiI	GTMKAC	1 cut(s)	166
XspI	CTAG	7 cut(s)	233, 339, 420, 1334, 1626, 1646, 1797

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.