Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001088

Physical Location & Seq

Genomic Coordinates Reverse (-)

21650565 .. 21654200

Gene Structure 3636 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G58560.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGCTTAGCGTTATACGAGTGCATCTACCGTCGGAGATTCCTATTGTTGGCTGCGAACTTACACCTTACGTACTTCTCCGGCGGCCTGATAAGACCCCCTCCACCGATGATGTGCCTGAGTCAGCCCCGCTTGAAGGTCACTTCTTAAAGTACAGATGGTTTCGAGTACAGAGTGATAAGAAAGTTGCGATTTGTAGTGTGCATCCATCCGAGACGGCAACATTGCAGTGTCTGGGATGTCTAAAGTCTAAAGTTCCTGTTGCCAAAAGCTACCATTGCTCTACTAAGTGCTTTTCGGATGCGTGGCAACATCACCGTGTGTTGCATGAGCGTGCTGCCAGTGCTGCTACAGAAGGAAATGATGAAGAAGAGTTGCCCCGTTTGAATAGCTCAGGGTCTGGATCTGGTGTTCTCAGCACCAGTGTTAGTTTAACGAATGGGTCATCATCAGTTTATCCTTCAGCCATAACTCAAAAGACCGGCGCCGGAGGAGAAACACTTGTTGAGGTTGGACGCTCTAAGACATACACACCAATGGCTGATGATATTTGCCATGTTTTGAAGTTTGAATGTGTAGTAGTCAATGCAGAGACAAAACAGAATGTGGGCCTTTCTTGTACCATATTGACTTCCCGTGTTATCCCAGCTCCATCACCTTCTCCGCGTAGGCTGATCTCTATTAGTGGAACTGATGTTACTGGGCACCTGGATTCTAATGGGCGGCCTTTGTCTATGGGAACATTCACTGTGCTGTCCTACAATATATTGTCTGATACATATGCTAGCAGCGACATATACAGTTACTGCCCCACATGGGCTCTCGCTTGGACATACCGTAGACAGAATTTGTTACGGGAAATTGTCAAGTACCGTGCAGATATAGTTTGTCTACAAGAGGTACAGAATGATCATTTTGAGGAGTTTTTTCTTCCTGAGCTGGATAAACACGGATACCAAGGTCTTTTTAAGAGGAAAACAAATGAGGTTTTCATCGGTAATACAAACACAATTGATGGGTGCGCTACTTTCTTCAGAAGAGACAGGTTCTCACATGTAAAAAAATATGAGGTTGAGTTCAACAAGGCTGCACAGTCTTTGACTGAGGCTATTATCCCTGTTTCCCAGAAGAAAAATGCTTTGAATCGGTTGGTCAAGGATAATGTTGCTTTAATAGTTGTACTGGAAGCAAAATTCGGTAGCCAGGCTGCTGACAATCCTGGGAAGCGCCAGCTACTTTGTGTGGCTAACACGCATGTAAACGTTCCTCATGAATTGAAAGATGTAAAGCTGTGGCAGGTTCACACATTATTGAAGGGACTGGAGAAAATAGCTGCCAGTGCAGATATTCCAATGCTTGTGTGTGGAGATTTCAACACAGTACCTGCGAGTGCTCCTCATACACTTCTTGCTGTGGGAAAGGTCGATCCATTGCACCCAGATTTGATGGTTGATCCTCTTGGAATTTTACGTCCTCACAGCAAGCTTACTCATCAGCTGCCACTGGTTAGTGCCTACTCACAATTTGCAAAAATGGGAGGCAACGTTATTACTGAGCAGCAACGTAGAAGACTGGATCCTGCATCAAGTGAACCGTTGTTTACCAACTGTACCAGGGACTTTATAGGCACACTTGATTACATATTTTACACAGCGGACACGCTAACAGTGGAATCGTTGTTGGAACTGTTGGATGAAGAGTCCTTGAGGAAGGACACAGCTCTTCCATCTCCAGAATGGTCTTCTGATCACATTGCACTTTTGGCTGAATTTCGCTGCATGCCCAGGGCCAGACGAAACAATATTTTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000932 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005976 GO:0005982 GO:0005984 GO:0005985 GO:0005986 GO:0006073 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009311 GO:0009312 GO:0009987 GO:0010467 GO:0016051 GO:0016070 GO:0016071 GO:0019252 GO:0032991 GO:0033692 GO:0034637 GO:0034641 GO:0034645 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046351 GO:0046483 GO:0071704 GO:0090304 GO:1901360 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

Exo_endo_phos zf-C6H2

Protein Analysis

602

Amino Acids

66.76

Weight (kDa)

7.03

Isoelectric Point (pI)

43.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-C6H2	PF15801	71 - 110	1.1e-06	zf-MYND-like zinc finger, mRNA-binding
Exo_endo_phos	PF03372	251 - 583	2.5e-25	Endonuclease/Exonuclease/phosphatase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001088)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G58560 AT3G58580
fragaria_vesca	FvH4_5g37360 FvH4_5g37360 FvH4_5g37650 FvH4_6g21630 FvH4_6g21630 FvH4_6g21630 FvH4_6g21630 FvH4_6g21630
malus_domestica	MD08G1182500.v1.1 MD12G1053300.v1.1 MD14G1051700.v1.1 MD15G1368200.v1.1 MD15G1368500.v1.1
prunus_persica	Prupe.1G516400_v2.0.a1 Prupe.1G516400_v2.0.a1 Prupe.1G516400_v2.0.a1 Prupe.7G084300_v2.0.a1
pyrus_communis	pycom08g15630 pycom15g33010 pycom15g33030
rosa_chinensis	RchiOBHm_Chr3g0478881 RchiOBHm_Chr7g0227401 RchiOBHm_Chr7g0239031
rosa_laevigata	RLG00000000789 RLG00000001657 RLG00000023618
rosa_multiflora	Rmu_sc0000868.1_g000004 Rmu_sc0004831.1_g000003 Rmu_sc0005651.1_g000003 Rmu_sc0005751.1_g000015
rosa_roxburghii	Rroxscaffold_3G00221350 Rroxscaffold_3G00237900 Rroxscaffold_3G00237980 Rroxscaffold_3G00238050 Rroxscaffold_5G00332920 Rroxscaffold_6G00403000 Rroxscaffold_6G00413120 Rroxscaffold_7G00214960
rosa_rugosa	Rorug03G0168800 Rorug03G0168900 Rorug07G0324800
rosa_samantha	Rh2DG401300 Rh3AG220500 Rh3BG252400 Rh3CG249200 Rh3DG245400 Rh6AG177800 Rh7AG393200 Rh7AG479600 Rh7BG452100 Rh7CG412400 Rh7CG497100 Rh7DG464600
rosa_wichuraiana	Rw2G030830 Rw3G019830 Rw6G015170 Rw7G040100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1285, 1390
AccB1I	GGYRCC	2 cut(s)	482, 702
AccI	GTMKAC	2 cut(s)	838, 889
AccII	CGCG	1 cut(s)	664
AciI	CCGC	5 cut(s)	82, 128, 662, 721, 1652
AclI	AACGTT	2 cut(s)	1260, 1542
AclWI	GGATC	5 cut(s)	409, 1418, 1445, 1568, 1581
AcsI	RAATTY	4 cut(s)	844, 1190, 1461, 1766
AcuI	CTGAAG	2 cut(s)	444, 1015
AcyI	GRCGYC	1 cut(s)	483
AdeI	CACNNNGTG	1 cut(s)	319
AfaI	GTAC	9 cut(s)	72, 152, 168, 619, 869, 900, 1179, 1380, 1609
AfiI	CCNNNNNNNGG	3 cut(s)	47, 134, 814
AflIII	ACRYGT	1 cut(s)	1051
AgsI	TTSAA	9 cut(s)	134, 385, 562, 569, 1078, 1141, 1276, 1312, 1372
AjnI	CCWGG	5 cut(s)	705, 1200, 1216, 1610, 1781
AloI	GAACNNNNNNTCC	2 cut(s)	393, 425
Alw21I	GWGCWC	1 cut(s)	1393
Alw26I	GTCTC	3 cut(s)	206, 584, 1032
AlwI	GGATC	5 cut(s)	409, 1418, 1445, 1568, 1581
AlwNI	CAGNNNCTG	4 cut(s)	232, 398, 804, 1382
AoxI	GGCC	4 cut(s)	83, 607, 722, 1785
ApoI	RAATTY	4 cut(s)	844, 1190, 1461, 1766
AspLEI	GCGC	3 cut(s)	485, 1022, 1227
AspS9I	GGNCC	2 cut(s)	607, 1785
AsuHPI	GGTGA	2 cut(s)	305, 645
AsuNHI	GCTAGC	1 cut(s)	782
BaeGI	GKGCMC	1 cut(s)	705
BaeI	ACNNNNGTAYC	2 cut(s)	943, 976
BamHI	GGATCC	1 cut(s)	1573
BanI	GGYRCC	2 cut(s)	482, 702
BanII	GRGCYC	1 cut(s)	820
BbsI	GAAGAC	2 cut(s)	1573, 1731
Bbv12I	GWGCWC	1 cut(s)	1393
BccI	CCATC	6 cut(s)	150, 214, 658, 1007, 1438, 1732
BceAI	ACGGC	1 cut(s)	231
BciT130I	CCWGG	5 cut(s)	707, 1202, 1218, 1612, 1783
BciVI	GTATCC	1 cut(s)	944
BclI	TGATCA	2 cut(s)	907, 1744
BcoDI	GTCTC	3 cut(s)	206, 584, 1032
BfaI	CTAG	1 cut(s)	783
BfmI	CTRYAG	1 cut(s)	348
BfoI	RGCGCY	2 cut(s)	486, 1228
BfuAI	ACCTGC	2 cut(s)	1285, 1390
BfuI	GTATCC	1 cut(s)	944
BlpI	GCTNAGC	1 cut(s)	5
Bme1390I	CCNGG	5 cut(s)	707, 1202, 1218, 1612, 1783
BmgT120I	GGNCC	2 cut(s)	607, 1785
BmiI	GGNNCC	3 cut(s)	484, 704, 1575
BmrFI	CCNGG	5 cut(s)	707, 1202, 1218, 1612, 1783
BmrI	ACTGGG	1 cut(s)	708
BmsI	GCATC	4 cut(s)	31, 211, 289, 1589
BmtI	GCTAGC	1 cut(s)	786
BmuI	ACTGGG	1 cut(s)	708
BpiI	GAAGAC	2 cut(s)	1573, 1731
BplI	GAGNNNNNCTC	2 cut(s)	1378, 1410
BpmI	CTGGAG	2 cut(s)	1340, 1713
Bpu10I	CCTNAGC	2 cut(s)	391, 933
Bpu1102I	GCTNAGC	1 cut(s)	5
BpuEI	CTTGAG	1 cut(s)	1723
BsaAI	YACGTR	1 cut(s)	70
BsaHI	GRCGYC	1 cut(s)	483
BsaJI	CCNNGG	5 cut(s)	955, 1217, 1611, 1781, 1782
BsaXI	ACNNNNNCTCC	2 cut(s)	1527, 1557
Bsc4I	CCNNNNNNNGG	3 cut(s)	47, 134, 814
Bse118I	RCCGGY	1 cut(s)	479
Bse1I	ACTGG	8 cut(s)	339, 420, 703, 1185, 1323, 1335, 1506, 1575
Bse3DI	GCAATG	4 cut(s)	221, 274, 1427, 1749
BseBI	CCWGG	5 cut(s)	707, 1202, 1218, 1612, 1783
BseDI	CCNNGG	5 cut(s)	955, 1217, 1611, 1781, 1782
BseGI	GGATG	5 cut(s)	202, 206, 242, 304, 1696
BseLI	CCNNNNNNNGG	3 cut(s)	47, 134, 814
BseMI	GCAATG	4 cut(s)	221, 274, 1427, 1749
BseMII	CTCAG	6 cut(s)	108, 405, 427, 924, 1092, 1542
BseNI	ACTGG	8 cut(s)	339, 420, 703, 1185, 1323, 1335, 1506, 1575
BseRI	GAGGAG	3 cut(s)	504, 932, 1383
BseSI	GKGCMC	1 cut(s)	705
BseYI	CCCAGC	1 cut(s)	643
BsgI	GTGCAG	3 cut(s)	894, 1071, 1359
Bsh1236I	CGCG	1 cut(s)	664
BshFI	GGCC	4 cut(s)	85, 609, 724, 1787
BshNI	GGYRCC	2 cut(s)	482, 702
BsiHKAI	GWGCWC	1 cut(s)	1393
BsiSI	CCGG	3 cut(s)	79, 480, 486
BslFI	GGGAC	2 cut(s)	1329, 1628
BslI	CCNNNNNNNGG	3 cut(s)	47, 134, 814
BsmAI	GTCTC	3 cut(s)	206, 584, 1032
BsmBI	CGTCTC	1 cut(s)	206
BsmFI	GGGAC	2 cut(s)	1329, 1628
BsnI	GGCC	4 cut(s)	85, 609, 724, 1787
Bsp1286I	GDGCHC	3 cut(s)	705, 820, 1393
Bsp143I	GATC	7 cut(s)	401, 672, 907, 1423, 1450, 1573, 1744
Bsp1720I	GCTNAGC	1 cut(s)	5
BspACI	CCGC	5 cut(s)	82, 128, 662, 721, 1652
BspANI	GGCC	4 cut(s)	85, 609, 724, 1787
BspCNI	CTCAG	6 cut(s)	109, 404, 426, 925, 1093, 1543
BspFNI	CGCG	1 cut(s)	664
BspHI	TCATGA	1 cut(s)	1267
BspLI	GGNNCC	3 cut(s)	484, 704, 1575
BspMI	ACCTGC	2 cut(s)	1285, 1390
BspOI	GCTAGC	1 cut(s)	786
BspPI	GGATC	5 cut(s)	409, 1418, 1445, 1568, 1581
BspQI	GCTCTTC	1 cut(s)	1725
BspT107I	GGYRCC	2 cut(s)	482, 702
BsrDI	GCAATG	4 cut(s)	221, 274, 1427, 1749
BsrFI	RCCGGY	1 cut(s)	479
BsrI	ACTGG	8 cut(s)	339, 420, 703, 1185, 1323, 1335, 1506, 1575
BssAI	RCCGGY	1 cut(s)	479
BssECI	CCNNGG	5 cut(s)	955, 1217, 1611, 1781, 1782
BssMI	GATC	7 cut(s)	401, 672, 907, 1423, 1450, 1573, 1744
BssNI	GRCGYC	1 cut(s)	483
BssT1I	CCWWGG	1 cut(s)	955
Bst2UI	CCWGG	5 cut(s)	707, 1202, 1218, 1612, 1783
Bst6I	CTCTTC	4 cut(s)	363, 1030, 1689, 1725
BstACI	GRCGYC	1 cut(s)	483
BstBAI	YACGTR	1 cut(s)	70
BstC8I	GCNNGC	5 cut(s)	333, 784, 1229, 1481, 1778
BstDEI	CTNAG	9 cut(s)	5, 117, 285, 391, 413, 519, 933, 1101, 1551
BstF5I	GGATG	5 cut(s)	202, 206, 242, 304, 1696
BstFNI	CGCG	1 cut(s)	664
BstH2I	RGCGCY	2 cut(s)	486, 1228
BstHHI	GCGC	3 cut(s)	485, 1022, 1227
BstKTI	GATC	7 cut(s)	404, 675, 910, 1426, 1453, 1576, 1747
BstMAI	GTCTC	3 cut(s)	206, 584, 1032
BstMBI	GATC	7 cut(s)	401, 672, 907, 1423, 1450, 1573, 1744
BstMWI	GCNNNNNNNGC	5 cut(s)	276, 341, 344, 1337, 1760
BstNI	CCWGG	5 cut(s)	707, 1202, 1218, 1612, 1783
BstNSI	RCATGY	3 cut(s)	1055, 1256, 1780
BstSCI	CCNGG	5 cut(s)	705, 1200, 1216, 1610, 1781
BstSFI	CTRYAG	1 cut(s)	348
BstSLI	GKGCMC	1 cut(s)	705
BstSNI	TACGTA	1 cut(s)	70
BstUI	CGCG	1 cut(s)	664
BstV2I	GAAGAC	2 cut(s)	1573, 1731
BstX2I	RGATCY	2 cut(s)	401, 1573
BstYI	RGATCY	2 cut(s)	401, 1573
BsuI	GTATCC	1 cut(s)	944
BsuRI	GGCC	4 cut(s)	85, 609, 724, 1787
BtsCI	GGATG	5 cut(s)	202, 206, 242, 304, 1696
BtsI	GCAGTG	1 cut(s)	233
BtsIMutI	CAGTG	7 cut(s)	233, 346, 427, 744, 1342, 1499, 1671
BveI	ACCTGC	2 cut(s)	1285, 1390
Cac8I	GCNNGC	5 cut(s)	333, 784, 1229, 1481, 1778
CaiI	CAGNNNCTG	4 cut(s)	232, 398, 804, 1382
CciI	TCATGA	1 cut(s)	1267
CfoI	GCGC	3 cut(s)	485, 1022, 1227
Cfr10I	RCCGGY	1 cut(s)	479
Cfr13I	GGNCC	2 cut(s)	607, 1785
CseI	GACGC	1 cut(s)	522
Csp6I	GTAC	9 cut(s)	71, 151, 167, 618, 868, 899, 1178, 1379, 1608
CviAII	CATG	7 cut(s)	326, 554, 813, 1052, 1253, 1268, 1777
CviQI	GTAC	9 cut(s)	71, 151, 167, 618, 868, 899, 1178, 1379, 1608
DdeI	CTNAG	9 cut(s)	5, 117, 285, 391, 413, 519, 933, 1101, 1551
DinI	GGCGCC	1 cut(s)	484
DpnI	GATC	7 cut(s)	403, 674, 909, 1425, 1452, 1575, 1746
DpnII	GATC	7 cut(s)	401, 672, 907, 1423, 1450, 1573, 1744
DraIII	CACNNNGTG	1 cut(s)	319
Eam1104I	CTCTTC	4 cut(s)	363, 1030, 1689, 1725
EarI	CTCTTC	4 cut(s)	363, 1030, 1689, 1725
Eco105I	TACGTA	1 cut(s)	70
Eco130I	CCWWGG	1 cut(s)	955
Eco24I	GRGCYC	1 cut(s)	820
Eco57I	CTGAAG	2 cut(s)	444, 1015
EcoRII	CCWGG	5 cut(s)	705, 1200, 1216, 1610, 1781
EcoT14I	CCWWGG	1 cut(s)	955
EcoT38I	GRGCYC	1 cut(s)	820
EgeI	GGCGCC	1 cut(s)	484
EheI	GGCGCC	1 cut(s)	484
ErhI	CCWWGG	1 cut(s)	955
Esp3I	CGTCTC	1 cut(s)	206
FaeI	CATG	7 cut(s)	329, 557, 816, 1055, 1256, 1271, 1780
FaqI	GGGAC	2 cut(s)	1329, 1628
FatI	CATG	7 cut(s)	325, 553, 812, 1051, 1252, 1267, 1776
FauI	CCCGC	1 cut(s)	135
FauNDI	CATATG	1 cut(s)	778
FbaI	TGATCA	2 cut(s)	907, 1744
FblI	GTMKAC	2 cut(s)	838, 889
FokI	GGATG	5 cut(s)	189, 193, 249, 311, 1703
FriOI	GRGCYC	1 cut(s)	820
FspBI	CTAG	1 cut(s)	783
GlaI	GCGC	3 cut(s)	484, 1021, 1226
GsaI	CCCAGC	1 cut(s)	647
GsuI	CTGGAG	2 cut(s)	1340, 1713
HaeII	RGCGCY	2 cut(s)	486, 1228
HaeIII	GGCC	4 cut(s)	85, 609, 724, 1787
HapII	CCGG	3 cut(s)	79, 480, 486
HgaI	GACGC	1 cut(s)	522
HhaI	GCGC	3 cut(s)	485, 1022, 1227
Hin1I	GRCGYC	1 cut(s)	483
Hin1II	CATG	7 cut(s)	329, 557, 816, 1055, 1256, 1271, 1780
Hin6I	GCGC	3 cut(s)	483, 1020, 1225
HinP1I	GCGC	3 cut(s)	483, 1020, 1225
HindIII	AAGCTT	1 cut(s)	1481
HinfI	GANTC	6 cut(s)	37, 119, 710, 1141, 1670, 1697
HpaII	CCGG	3 cut(s)	79, 480, 486
HphI	GGTGA	2 cut(s)	305, 645
Hpy166II	GTNNAC	6 cut(s)	839, 890, 1258, 1300, 1589, 1599
Hpy188I	TCNGA	6 cut(s)	34, 211, 298, 772, 1034, 1744
Hpy188III	TCNNGA	4 cut(s)	399, 932, 1268, 1730
Hpy8I	GTNNAC	6 cut(s)	839, 890, 1258, 1300, 1589, 1599
Hpy99I	CGWCG	1 cut(s)	34
HpyAV	CCTTC	6 cut(s)	128, 347, 468, 666, 1306, 1702
HpyCH4IV	ACGT	5 cut(s)	69, 1260, 1468, 1542, 1561
HpyF10VI	GCNNNNNNNGC	5 cut(s)	276, 341, 344, 1337, 1760
HpyF3I	CTNAG	9 cut(s)	5, 117, 285, 391, 413, 519, 933, 1101, 1551
HpySE526I	ACGT	5 cut(s)	69, 1260, 1468, 1542, 1561
Hsp92I	GRCGYC	1 cut(s)	483
Hsp92II	CATG	7 cut(s)	329, 557, 816, 1055, 1256, 1271, 1780
HspAI	GCGC	3 cut(s)	483, 1020, 1225
KasI	GGCGCC	1 cut(s)	482
Ksp22I	TGATCA	2 cut(s)	907, 1744
Kzo9I	GATC	7 cut(s)	401, 672, 907, 1423, 1450, 1573, 1744
LguI	GCTCTTC	1 cut(s)	1725
LmnI	GCTCC	2 cut(s)	652, 1396
LweI	GCATC	4 cut(s)	31, 211, 289, 1589
MaeI	CTAG	1 cut(s)	783
MaeII	ACGT	5 cut(s)	69, 1260, 1468, 1542, 1561
MaeIII	GTNAC	4 cut(s)	137, 694, 800, 849
MalI	GATC	7 cut(s)	403, 674, 909, 1425, 1452, 1575, 1746
MboI	GATC	7 cut(s)	401, 672, 907, 1423, 1450, 1573, 1744
MfeI	CAATTG	1 cut(s)	1008
MflI	RGATCY	2 cut(s)	401, 1573
MhlI	GDGCHC	3 cut(s)	705, 820, 1393
MluCI	AATT	8 cut(s)	844, 858, 1008, 1190, 1271, 1461, 1520, 1766
Mly113I	GGCGCC	1 cut(s)	483
MlyI	GAGTC	2 cut(s)	128, 1706
MmeI	TCCRAC	4 cut(s)	12, 490, 1659, 1668
MseI	TTAA	4 cut(s)	146, 431, 966, 1169
MslI	CAYNNNNRTG	4 cut(s)	226, 315, 330, 533
MspA1I	CMGCKG	2 cut(s)	1495, 1652
MspI	CCGG	3 cut(s)	79, 480, 486
MspR9I	CCNGG	5 cut(s)	707, 1202, 1218, 1612, 1783
MunI	CAATTG	1 cut(s)	1008
MvaI	CCWGG	5 cut(s)	707, 1202, 1218, 1612, 1783
MvnI	CGCG	1 cut(s)	664
MwoI	GCNNNNNNNGC	5 cut(s)	276, 341, 344, 1337, 1760
NarI	GGCGCC	1 cut(s)	483
NdeI	CATATG	1 cut(s)	778
NdeII	GATC	7 cut(s)	401, 672, 907, 1423, 1450, 1573, 1744
NheI	GCTAGC	1 cut(s)	782
NlaIII	CATG	7 cut(s)	329, 557, 816, 1055, 1256, 1271, 1780
NlaIV	GGNNCC	3 cut(s)	484, 704, 1575
NmuCI	GTSAC	1 cut(s)	137
NspI	RCATGY	3 cut(s)	1055, 1256, 1780
PaeI	GCATGC	1 cut(s)	1780
PagI	TCATGA	1 cut(s)	1267
PasI	CCCWGGG	1 cut(s)	1782
PciI	ACATGT	1 cut(s)	1051
PciSI	GCTCTTC	1 cut(s)	1725
PfeI	GAWTC	4 cut(s)	37, 710, 1141, 1670
PleI	GAGTC	2 cut(s)	127, 1705
PluTI	GGCGCC	1 cut(s)	486
PpsI	GAGTC	2 cut(s)	127, 1705
Ppu21I	YACGTR	1 cut(s)	70
PscI	ACATGT	1 cut(s)	1051
Psp1406I	AACGTT	2 cut(s)	1260, 1542
Psp6I	CCWGG	5 cut(s)	705, 1200, 1216, 1610, 1781
PspFI	CCCAGC	1 cut(s)	643
PspGI	CCWGG	5 cut(s)	705, 1200, 1216, 1610, 1781
PspN4I	GGNNCC	3 cut(s)	484, 704, 1575
PspPI	GGNCC	2 cut(s)	607, 1785
PsrI	GAACNNNNNNTAC	2 cut(s)	679, 711
PstNI	CAGNNNCTG	4 cut(s)	232, 398, 804, 1382
PsuI	RGATCY	2 cut(s)	401, 1573
PvuII	CAGCTG	1 cut(s)	1495
RsaI	GTAC	9 cut(s)	72, 152, 168, 619, 869, 900, 1179, 1380, 1609
RsaNI	GTAC	9 cut(s)	71, 151, 167, 618, 868, 899, 1178, 1379, 1608
RseI	CAYNNNNRTG	4 cut(s)	226, 315, 330, 533
SapI	GCTCTTC	1 cut(s)	1725
SaqAI	TTAA	4 cut(s)	146, 431, 966, 1169
Sau3AI	GATC	7 cut(s)	401, 672, 907, 1423, 1450, 1573, 1744
Sau96I	GGNCC	2 cut(s)	607, 1785
SchI	GAGTC	2 cut(s)	128, 1706
ScrFI	CCNGG	5 cut(s)	707, 1202, 1218, 1612, 1783
SduI	GDGCHC	3 cut(s)	705, 820, 1393
SfaNI	GCATC	4 cut(s)	31, 211, 289, 1589
SfcI	CTRYAG	1 cut(s)	348
SfoI	GGCGCC	1 cut(s)	484
SmiMI	CAYNNNNRTG	4 cut(s)	226, 315, 330, 533
SmlI	CTYRAG	1 cut(s)	1702
SmoI	CTYRAG	1 cut(s)	1702
SnaBI	TACGTA	1 cut(s)	70
SphI	GCATGC	1 cut(s)	1780
Sse9I	AATT	8 cut(s)	844, 858, 1008, 1190, 1271, 1461, 1520, 1766
SsiI	CCGC	5 cut(s)	82, 128, 662, 721, 1652
SspDI	GGCGCC	1 cut(s)	482
SspI	AATATT	1 cut(s)	1801
SspMI	CTAG	1 cut(s)	783
StyD4I	CCNGG	5 cut(s)	705, 1200, 1216, 1610, 1781
StyI	CCWWGG	1 cut(s)	955
TaiI	ACGT	5 cut(s)	72, 1263, 1471, 1545, 1564
TaqI	TCGA	2 cut(s)	163, 1422
TasI	AATT	8 cut(s)	844, 858, 1008, 1190, 1271, 1461, 1520, 1766
TatI	WGTACW	3 cut(s)	150, 166, 1177
TauI	GCSGC	2 cut(s)	85, 724
TfiI	GAWTC	4 cut(s)	37, 710, 1141, 1670
Tru1I	TTAA	4 cut(s)	146, 431, 966, 1169
Tru9I	TTAA	4 cut(s)	146, 431, 966, 1169
TscAI	CASTG	7 cut(s)	233, 346, 427, 751, 1342, 1506, 1671
TseFI	GTSAC	1 cut(s)	137
Tsp45I	GTSAC	1 cut(s)	137
TspDTI	ATGAA	4 cut(s)	378, 979, 1284, 1707
TspGWI	ACGGA	1 cut(s)	963
TspRI	CASTG	7 cut(s)	233, 346, 427, 751, 1342, 1506, 1671
XapI	RAATTY	4 cut(s)	844, 1190, 1461, 1766
XceI	RCATGY	3 cut(s)	1055, 1256, 1780
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1731
XmiI	GTMKAC	2 cut(s)	838, 889
XspI	CTAG	1 cut(s)	783

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.