MD15G1368500.v1.1

Carbon catabolite repressor protein 4 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0001088
Physical Location & Seq
Reverse (-)
44807375 .. 44813236
5862 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1368500.v1.1.491

Sequence Viewer

Length: 1788 bp
ATGGCTCAAGAATCTGGGTCGTCTGAGTCCCCTAAATGGAGACTCGATCTAGATTTTCCTTCGAAGACTCCTGTGTTCGGCTGCAGATTCCAGCCCTACATTCGCATGCAAATAATCGACAACTCCTTTGAATTCCCGTGTCACGAGTATTCTTTCACATGGTACCAAGAGGATGTTTGCTTGTCTTCCAATCAAGAGAAGATTCGCTGTTTTGTCCACCATGATGAGATGGCCACAATTCAGTGTACAGTTTGTGCAAGTCAAAGTCGACTTGGCAAGATAAGTTATTATTGCTCCATAAGTTGTTATAAGGCTGCCTGGGACAAGCACAAGGTGCACCATCATTTGGCAGCTCCCAATCCTGATCCACAAGCAGTGAACATTATCAAGAGTTTTGGGCCTTATGGCTCTTATCCTGATTTACCTTACTATCAGTATGATGGTTCACAACCTGATGTGACGGTGGAAGAAGATGGGAAAACTTGGATTCAGGTGGGATCTTCAGAATATTATGTACCCACAGAAAATGATATTGGATTTTGTCTGAGGCTAAAATTTGAAGTTATTGATTCTTCAACGCGCACACAATTGTGCCCAGCAAGAATCAAAGTGACAGATCCTGTGATTTATCCTCTTCCTCATCCACCGCGTTGTACAATGTGGAACTCTTGCAGCGGTGACCTCAAAGAACAATGTTCTAATGATGTAACCTTTAGGGTGCTGTCCTATAATATCCTCGCTGATTATCTTGCTACTAGTGGTAGTAACCGGCACTCCTACTGCCTAGATTGGGCTCTTTCATGGGAATATCGTCAGCAAAATTTACTTTATGAGATCATTGCATATGATGCAGATATCCTATGTCTTCAAGAGGTACAGAATGATCATTTTGAGAATTTCCTCAGACCTGAGTTGGCAAAATATGGATACTCGGCTATATACAAGAAGAAAAAGATCGAGATGTTTACATGTAAGTCCCAGCAGACAACTGATGGATGCGCTACGTTTTACCGCAGTCAACGATTCAAAGAAATCGCAACATATGAGCTTGAGTTTAATAATTCAGCAAAGCCCTTTGTAGATTCATTGGATGGTAAACAGAAAAGTGAAGCTTACCGGCTGCTGAAGGGCAATGTTGCACTTCTTGTTATATTAGAAATGGTGGAAAATGAGGGCTCCTCTGATGGCAATCGACCTAGAATTTGTGTGTCAAATACCCATTTACATGCAAATGGAAAAGATCCAGACATAAAATTGTTGCAGGTTGTAACCCTCATCCATGCACTCGAGAAAATTGCCCAGTTGAAGATTCCCCTACTGATTTGTGCAGATTTGAACTCTCTGCCTCAGAGTGATCCTTATACGTTCATAAGCAAGGGCAGAGTTGAGATTCTTCCCAGCAAGGAAACTGATCAATCGGGCATATTGCAGACACTCAAGCTTTCTCATTCATTGAATCTAGTAAGTGCATATGCAACTTTTTTTCATTCCGATGGGGTCGAGGATCACCAACGTGAGAAGCTGGATCCTGAAACCAAGGAGGCTTTGTTCACCTACTTCACACCATCCTTCTTTGGAACTATAGATTATATATTCTACACAGCTGCTAGTTTGAGGCTTGACAGTGTATTGGAGCTTCTTGACAAAGAAGGCCTCCTTCCATCCGCTAAATGGTCATCAGACCATATTGCCCTCATGGCAAGTTTTTCTCTTGAGGCAAGCGCTTACAATTGGAGCTCAGAATCTCTTACGGAGAGCCTAGGGCAGCACCCAACATTTGCACAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
Exo_endo_phos zf-C6H2

Protein Analysis

596

Amino Acids

67.8

Weight (kDa)

5.38

Isoelectric Point (pI)

41.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C6H2 PF15801 76 - 115 1e-05 zf-MYND-like zinc finger, mRNA-binding
Exo_endo_phos PF03372 241 - 562 7.3e-22 Endonuclease/Exonuclease/phosphatase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 309
Acc36I ACCTGC 1 cut(s) 1252
Acc65I GGTACC 1 cut(s) 162
AccB1I GGYRCC 1 cut(s) 162
AccB7I CCANNNNNTGG 1 cut(s) 346
AccI GTMKAC 1 cut(s) 268
AccII CGCG 2 cut(s) 580, 649
AciI CCGC 4 cut(s) 647, 675, 1012, 1665
AclWI GGATC 8 cut(s) 359, 505, 611, 1235, 1349, 1512, 1520, 1533
AcoI YGGCCR 1 cut(s) 231
AcsI RAATTY 5 cut(s) 131, 554, 820, 895, 1200
AcuI CTGAAG 2 cut(s) 486, 1145
AdeI CACNNNGTG 1 cut(s) 334
AfaI GTAC 5 cut(s) 164, 247, 516, 655, 876
AfeI AGCGCT 1 cut(s) 1723
AfiI CCNNNNNNNGG 5 cut(s) 36, 77, 346, 790, 1671
AflIII ACRYGT 1 cut(s) 968
AgsI TTSAA 8 cut(s) 131, 560, 576, 869, 1027, 1306, 1336, 1456
AhlI ACTAGT 1 cut(s) 755
AjnI CCWGG 1 cut(s) 317
AjuI GAANNNNNNNTTGG 2 cut(s) 516, 548
AleI CACNNNNGTG 2 cut(s) 589, 1512
AloI GAACNNNNNNTCC 2 cut(s) 1532, 1564
AluBI AGCT 8 cut(s) 353, 1048, 1112, 1441, 1522, 1604, 1636, 1737
AluI AGCT 8 cut(s) 353, 1048, 1112, 1441, 1522, 1604, 1636, 1737
Alw21I GWGCWC 2 cut(s) 339, 1739
Alw26I GTCTC 1 cut(s) 34
Alw44I GTGCAC 1 cut(s) 335
AlwI GGATC 8 cut(s) 359, 505, 611, 1235, 1349, 1512, 1520, 1533
AlwNI CAGNNNCTG 1 cut(s) 620
Ama87I CYCGRG 1 cut(s) 1286
Aor51HI AGCGCT 1 cut(s) 1723
AoxI GGCC 3 cut(s) 231, 398, 1651
ApaLI GTGCAC 1 cut(s) 335
ApeKI GCWGC 7 cut(s) 81, 314, 350, 672, 1120, 1604, 1765
ApoI RAATTY 5 cut(s) 131, 554, 820, 895, 1200
ArsI GACNNNNNNTTYG 4 cut(s) 110, 142, 1185, 1217
Asp718I GGTACC 1 cut(s) 162
AspA2I CCTAGG 1 cut(s) 1759
AspLEI GCGC 3 cut(s) 582, 1001, 1724
AspS9I GGNCC 1 cut(s) 398
AsuHPI GGTGA 3 cut(s) 689, 1499, 1543
AsuII TTCGAA 1 cut(s) 62
AvaI CYCGRG 1 cut(s) 1286
AvrII CCTAGG 1 cut(s) 1759
BaeGI GKGCMC 2 cut(s) 339, 596
BalI TGGCCA 1 cut(s) 233
BamHI GGATCC 1 cut(s) 1525
BanI GGYRCC 1 cut(s) 162
BanII GRGCYC 3 cut(s) 796, 1178, 1739
BarI GAAGNNNNNNTAC 2 cut(s) 1620, 1652
BauI CACGAG 1 cut(s) 143
BbsI GAAGAC 3 cut(s) 71, 177, 857
Bbv12I GWGCWC 2 cut(s) 339, 1739
BbvI GCAGC 7 cut(s) 68, 301, 362, 684, 1107, 1591, 1777
BcgI CGANNNNNNTGC 2 cut(s) 1277, 1311
BciT130I CCWGG 1 cut(s) 319
BciVI GTATCC 1 cut(s) 920
BclI TGATCA 2 cut(s) 883, 1411
BcoDI GTCTC 1 cut(s) 34
BcuI ACTAGT 1 cut(s) 755
BfaI CTAG 7 cut(s) 50, 756, 785, 1197, 1460, 1608, 1760
BfmI CTRYAG 2 cut(s) 82, 1581
BfoI RGCGCY 1 cut(s) 1725
BfuAI ACCTGC 1 cut(s) 1252
BfuI GTATCC 1 cut(s) 920
BglI GCCNNNNNGGC 1 cut(s) 1697
BisI GCNGC 7 cut(s) 82, 315, 351, 673, 1121, 1605, 1766
BlnI CCTAGG 1 cut(s) 1759
BlsI GCNGC 7 cut(s) 83, 316, 352, 674, 1122, 1606, 1767
Bme1390I CCNGG 1 cut(s) 319
BmeT110I CYCGRG 1 cut(s) 1286
BmgT120I GGNCC 1 cut(s) 398
BmiI GGNNCC 3 cut(s) 164, 1177, 1527
BmrFI CCNGG 1 cut(s) 319
BmrI ACTGGG 1 cut(s) 1294
BmsI GCATC 2 cut(s) 838, 986
BmuI ACTGGG 1 cut(s) 1294
BpiI GAAGAC 3 cut(s) 71, 177, 857
BplI GAGNNNNNCTC 2 cut(s) 1163, 1195
Bpu14I TTCGAA 1 cut(s) 62
BpuEI CTTGAG 3 cut(s) 1070, 1421, 1733
BsaBI GATNNNNATC 1 cut(s) 1188
BsaJI CCNNGG 3 cut(s) 318, 1536, 1759
BsaXI ACNNNNNCTCC 4 cut(s) 758, 788, 1532, 1562
Bsc4I CCNNNNNNNGG 5 cut(s) 36, 77, 346, 790, 1671
Bse118I RCCGGY 2 cut(s) 768, 1116
Bse1I ACTGG 1 cut(s) 1300
Bse3DI GCAATG 2 cut(s) 837, 1138
Bse8I GATNNNNATC 1 cut(s) 1188
BseBI CCWGG 1 cut(s) 319
BseDI CCNNGG 3 cut(s) 318, 1536, 1759
BseGI GGATG 7 cut(s) 178, 640, 1001, 1096, 1275, 1565, 1661
BseJI GATNNNNATC 1 cut(s) 1188
BseLI CCNNNNNNNGG 5 cut(s) 36, 77, 346, 790, 1671
BseMI GCAATG 2 cut(s) 837, 1138
BseMII CTCAG 6 cut(s) 15, 536, 900, 916, 1361, 1752
BseNI ACTGG 1 cut(s) 1300
BseRI GAGGAG 1 cut(s) 1168
BseSI GKGCMC 2 cut(s) 339, 596
BseXI GCAGC 7 cut(s) 68, 301, 362, 684, 1107, 1591, 1777
BseYI CCCAGC 3 cut(s) 595, 978, 1397
BsgI GTGCAG 1 cut(s) 1347
Bsh1236I CGCG 2 cut(s) 580, 649
BshFI GGCC 3 cut(s) 233, 400, 1653
BshNI GGYRCC 1 cut(s) 162
BsiHKAI GWGCWC 2 cut(s) 339, 1739
BsiHKCI CYCGRG 1 cut(s) 1286
BsiSI CCGG 2 cut(s) 769, 1117
BslFI GGGAC 3 cut(s) 13, 335, 961
BslI CCNNNNNNNGG 5 cut(s) 36, 77, 346, 790, 1671
BsmAI GTCTC 1 cut(s) 34
BsmFI GGGAC 3 cut(s) 13, 335, 961
BsnI GGCC 3 cut(s) 233, 400, 1653
BsoBI CYCGRG 1 cut(s) 1286
Bsp119I TTCGAA 1 cut(s) 62
Bsp1286I GDGCHC 5 cut(s) 339, 596, 796, 1178, 1739
Bsp1407I TGTACA 2 cut(s) 245, 653
BspACI CCGC 4 cut(s) 647, 675, 1012, 1665
BspANI GGCC 3 cut(s) 233, 400, 1653
BspCNI CTCAG 6 cut(s) 16, 537, 901, 915, 1360, 1751
BspFNI CGCG 2 cut(s) 580, 649
BspLI GGNNCC 3 cut(s) 164, 1177, 1527
BspMAI CTGCAG 1 cut(s) 86
BspMI ACCTGC 1 cut(s) 1252
BspPI GGATC 8 cut(s) 359, 505, 611, 1235, 1349, 1512, 1520, 1533
BspT104I TTCGAA 1 cut(s) 62
BspT107I GGYRCC 1 cut(s) 162
BsrDI GCAATG 2 cut(s) 837, 1138
BsrFI RCCGGY 2 cut(s) 768, 1116
BsrGI TGTACA 2 cut(s) 245, 653
BsrI ACTGG 1 cut(s) 1300
BssAI RCCGGY 2 cut(s) 768, 1116
BssECI CCNNGG 3 cut(s) 318, 1536, 1759
BssSI CACGAG 1 cut(s) 143
BssT1I CCWWGG 2 cut(s) 1536, 1759
Bst2BI CACGAG 1 cut(s) 143
Bst2UI CCWGG 1 cut(s) 319
Bst4CI ACNGT 3 cut(s) 250, 463, 1625
Bst6I CTCTTC 1 cut(s) 639
BstAPI GCANNNNNTGC 2 cut(s) 334, 848
BstAUI TGTACA 2 cut(s) 245, 653
BstBI TTCGAA 1 cut(s) 62
BstC8I GCNNGC 2 cut(s) 107, 1720
BstDEI CTNAG 6 cut(s) 24, 545, 902, 909, 1347, 1738
BstEII GGTNACC 1 cut(s) 677
BstF5I GGATG 7 cut(s) 178, 640, 1001, 1096, 1275, 1565, 1661
BstFNI CGCG 2 cut(s) 580, 649
BstH2I RGCGCY 1 cut(s) 1725
BstHHI GCGC 3 cut(s) 582, 1001, 1724
BstMAI GTCTC 1 cut(s) 34
BstMWI GCNNNNNNNGC 3 cut(s) 334, 848, 1697
BstNI CCWGG 1 cut(s) 319
BstNSI RCATGY 3 cut(s) 109, 972, 1229
BstPI GGTNACC 1 cut(s) 677
BstSCI CCNGG 1 cut(s) 317
BstSFI CTRYAG 2 cut(s) 82, 1581
BstSLI GKGCMC 2 cut(s) 339, 596
BstUI CGCG 2 cut(s) 580, 649
BstV1I GCAGC 7 cut(s) 68, 301, 362, 684, 1107, 1591, 1777
BstV2I GAAGAC 3 cut(s) 71, 177, 857
BstX2I RGATCY 4 cut(s) 497, 616, 1240, 1525
BstYI RGATCY 4 cut(s) 497, 616, 1240, 1525
BsuI GTATCC 1 cut(s) 920
BsuRI GGCC 3 cut(s) 233, 400, 1653
BtsCI GGATG 7 cut(s) 178, 640, 1001, 1096, 1275, 1565, 1661
BtsI GCAGTG 1 cut(s) 381
BtsIMutI CAGTG 3 cut(s) 248, 381, 1630
BveI ACCTGC 1 cut(s) 1252
Cac8I GCNNGC 2 cut(s) 107, 1720
CaiI CAGNNNCTG 1 cut(s) 620
CfoI GCGC 3 cut(s) 582, 1001, 1724
Cfr10I RCCGGY 2 cut(s) 768, 1116
Cfr13I GGNCC 1 cut(s) 398
Csp6I GTAC 5 cut(s) 163, 246, 515, 654, 875
CviAII CATG 8 cut(s) 106, 159, 221, 801, 969, 1226, 1280, 1696
CviQI GTAC 5 cut(s) 163, 246, 515, 654, 875
DdeI CTNAG 6 cut(s) 24, 545, 902, 909, 1347, 1738
DraIII CACNNNGTG 1 cut(s) 334
EaeI YGGCCR 1 cut(s) 231
Eam1104I CTCTTC 1 cut(s) 639
EarI CTCTTC 1 cut(s) 639
Ecl136II GAGCTC 1 cut(s) 1737
Eco130I CCWWGG 2 cut(s) 1536, 1759
Eco147I AGGCCT 1 cut(s) 1653
Eco24I GRGCYC 3 cut(s) 796, 1178, 1739
Eco32I GATATC 1 cut(s) 856
Eco47III AGCGCT 1 cut(s) 1723
Eco53kI GAGCTC 1 cut(s) 1737
Eco57I CTGAAG 2 cut(s) 486, 1145
Eco88I CYCGRG 1 cut(s) 1286
Eco91I GGTNACC 1 cut(s) 677
EcoICRI GAGCTC 1 cut(s) 1737
EcoO65I GGTNACC 1 cut(s) 677
EcoRI GAATTC 1 cut(s) 131
EcoRII CCWGG 1 cut(s) 317
EcoRV GATATC 1 cut(s) 856
EcoT14I CCWWGG 2 cut(s) 1536, 1759
EcoT38I GRGCYC 3 cut(s) 796, 1178, 1739
ErhI CCWWGG 2 cut(s) 1536, 1759
FaeI CATG 8 cut(s) 109, 162, 224, 804, 972, 1229, 1283, 1699
FalI AAGNNNNNCTT 4 cut(s) 1096, 1128, 1641, 1673
FaqI GGGAC 3 cut(s) 13, 335, 961
FatI CATG 8 cut(s) 105, 158, 220, 800, 968, 1225, 1279, 1695
FauNDI CATATG 3 cut(s) 844, 1042, 1471
FbaI TGATCA 2 cut(s) 883, 1411
FblI GTMKAC 1 cut(s) 268
Fnu4HI GCNGC 7 cut(s) 82, 315, 351, 673, 1121, 1605, 1766
FokI GGATG 7 cut(s) 185, 627, 1008, 1103, 1262, 1552, 1648
FriOI GRGCYC 3 cut(s) 796, 1178, 1739
Fsp4HI GCNGC 7 cut(s) 82, 315, 351, 673, 1121, 1605, 1766
FspBI CTAG 7 cut(s) 50, 756, 785, 1197, 1460, 1608, 1760
GlaI GCGC 3 cut(s) 581, 1000, 1723
GluI GCNGC 7 cut(s) 82, 315, 351, 673, 1121, 1605, 1766
GsaI CCCAGC 3 cut(s) 599, 982, 1401
HaeII RGCGCY 1 cut(s) 1725
HaeIII GGCC 3 cut(s) 233, 400, 1653
HapII CCGG 2 cut(s) 769, 1117
HhaI GCGC 3 cut(s) 582, 1001, 1724
Hin1II CATG 8 cut(s) 109, 162, 224, 804, 972, 1229, 1283, 1699
Hin6I GCGC 3 cut(s) 580, 999, 1722
HinP1I GCGC 3 cut(s) 580, 999, 1722
HincII GTYRAC 2 cut(s) 269, 1019
HindII GTYRAC 2 cut(s) 269, 1019
HindIII AAGCTT 2 cut(s) 1110, 1439
HpaII CCGG 2 cut(s) 769, 1117
HphI GGTGA 3 cut(s) 689, 1499, 1543
Hpy188I TCNGA 9 cut(s) 25, 505, 546, 905, 1183, 1350, 1492, 1681, 1741
HpyAV CCTTC 5 cut(s) 69, 1120, 1579, 1643, 1667
HpyCH4III ACNGT 3 cut(s) 250, 463, 1625
HpyCH4IV ACGT 3 cut(s) 1004, 1364, 1513
HpyF10VI GCNNNNNNNGC 3 cut(s) 334, 848, 1697
HpyF3I CTNAG 6 cut(s) 24, 545, 902, 909, 1347, 1738
HpySE526I ACGT 3 cut(s) 1004, 1364, 1513
Hsp92II CATG 8 cut(s) 109, 162, 224, 804, 972, 1229, 1283, 1699
HspAI GCGC 3 cut(s) 580, 999, 1722
KpnI GGTACC 1 cut(s) 166
Ksp22I TGATCA 2 cut(s) 883, 1411
LmnI GCTCC 5 cut(s) 299, 358, 1181, 1633, 1734
Lsp1109I GCAGC 7 cut(s) 68, 301, 362, 684, 1107, 1591, 1777
LweI GCATC 2 cut(s) 838, 986
MaeI CTAG 7 cut(s) 50, 756, 785, 1197, 1460, 1608, 1760
MaeII ACGT 3 cut(s) 1004, 1364, 1513
MaeIII GTNAC 7 cut(s) 140, 457, 610, 677, 706, 764, 1267
MfeI CAATTG 2 cut(s) 587, 1729
MflI RGATCY 4 cut(s) 497, 616, 1240, 1525
MhlI GDGCHC 5 cut(s) 339, 596, 796, 1178, 1739
MlsI TGGCCA 1 cut(s) 233
MluNI TGGCCA 1 cut(s) 233
MlyI GAGTC 3 cut(s) 35, 36, 61
Mox20I TGGCCA 1 cut(s) 233
MscI TGGCCA 1 cut(s) 233
MseI TTAA 1 cut(s) 1056
MslI CAYNNNNRTG 7 cut(s) 104, 222, 589, 1224, 1230, 1491, 1512
Msp20I TGGCCA 1 cut(s) 233
MspA1I CMGCKG 2 cut(s) 675, 1604
MspI CCGG 2 cut(s) 769, 1117
MspR9I CCNGG 1 cut(s) 319
MunI CAATTG 2 cut(s) 587, 1729
MvaI CCWGG 1 cut(s) 319
MvnI CGCG 2 cut(s) 580, 649
MwoI GCNNNNNNNGC 3 cut(s) 334, 848, 1697
NdeI CATATG 3 cut(s) 844, 1042, 1471
NlaIII CATG 8 cut(s) 109, 162, 224, 804, 972, 1229, 1283, 1699
NlaIV GGNNCC 3 cut(s) 164, 1177, 1527
NmeAIII GCCGAG 1 cut(s) 911
NmuCI GTSAC 4 cut(s) 140, 457, 610, 677
NspI RCATGY 3 cut(s) 109, 972, 1229
NspV TTCGAA 1 cut(s) 62
OliI CACNNNNGTG 2 cut(s) 589, 1512
PaeI GCATGC 1 cut(s) 109
PaeR7I CTCGAG 1 cut(s) 1286
PceI AGGCCT 1 cut(s) 1653
PciI ACATGT 1 cut(s) 968
PflMI CCANNNNNTGG 1 cut(s) 346
PkrI GCNGC 7 cut(s) 83, 316, 352, 674, 1122, 1606, 1767
PleI GAGTC 3 cut(s) 34, 36, 61
PpsI GAGTC 3 cut(s) 34, 36, 61
PscI ACATGT 1 cut(s) 968
PsiI TTATAA 1 cut(s) 309
Psp124BI GAGCTC 1 cut(s) 1739
Psp6I CCWGG 1 cut(s) 317
PspEI GGTNACC 1 cut(s) 677
PspFI CCCAGC 3 cut(s) 595, 978, 1397
PspGI CCWGG 1 cut(s) 317
PspN4I GGNNCC 3 cut(s) 164, 1177, 1527
PspPI GGNCC 1 cut(s) 398
PstI CTGCAG 1 cut(s) 86
PstNI CAGNNNCTG 1 cut(s) 620
PsuI RGATCY 4 cut(s) 497, 616, 1240, 1525
PvuII CAGCTG 1 cut(s) 1604
RsaI GTAC 5 cut(s) 164, 247, 516, 655, 876
RsaNI GTAC 5 cut(s) 163, 246, 515, 654, 875
RseI CAYNNNNRTG 7 cut(s) 104, 222, 589, 1224, 1230, 1491, 1512
SacI GAGCTC 1 cut(s) 1739
SalI GTCGAC 1 cut(s) 267
SaqAI TTAA 1 cut(s) 1056
SatI GCNGC 7 cut(s) 82, 315, 351, 673, 1121, 1605, 1766
Sau96I GGNCC 1 cut(s) 398
SchI GAGTC 3 cut(s) 35, 36, 61
ScrFI CCNGG 1 cut(s) 319
SduI GDGCHC 5 cut(s) 339, 596, 796, 1178, 1739
SfaNI GCATC 2 cut(s) 838, 986
SfcI CTRYAG 2 cut(s) 82, 1581
Sfr274I CTCGAG 1 cut(s) 1286
SfuI TTCGAA 1 cut(s) 62
SlaI CTCGAG 1 cut(s) 1286
SmiMI CAYNNNNRTG 7 cut(s) 104, 222, 589, 1224, 1230, 1491, 1512
SmlI CTYRAG 5 cut(s) 6, 1049, 1286, 1436, 1712
SmoI CTYRAG 5 cut(s) 6, 1049, 1286, 1436, 1712
SpeI ACTAGT 1 cut(s) 755
SphI GCATGC 1 cut(s) 109
SseBI AGGCCT 1 cut(s) 1653
SsiI CCGC 4 cut(s) 647, 675, 1012, 1665
SspI AATATT 1 cut(s) 509
SspMI CTAG 7 cut(s) 50, 756, 785, 1197, 1460, 1608, 1760
SstI GAGCTC 1 cut(s) 1739
StuI AGGCCT 1 cut(s) 1653
StyD4I CCNGG 1 cut(s) 317
StyI CCWWGG 2 cut(s) 1536, 1759
TaaI ACNGT 3 cut(s) 250, 463, 1625
TaiI ACGT 3 cut(s) 1007, 1367, 1516
TaqI TCGA 8 cut(s) 45, 62, 117, 268, 957, 1192, 1287, 1500
TatI WGTACW 2 cut(s) 245, 653
Tru1I TTAA 1 cut(s) 1056
Tru9I TTAA 1 cut(s) 1056
TscAI CASTG 3 cut(s) 248, 381, 1630
TseFI GTSAC 4 cut(s) 140, 457, 610, 677
TseI GCWGC 7 cut(s) 81, 314, 350, 672, 1120, 1604, 1765
Tsp45I GTSAC 4 cut(s) 140, 457, 610, 677
TspDTI ATGAA 5 cut(s) 789, 1074, 1357, 1440, 1475
TspGWI ACGGA 1 cut(s) 1766
TspRI CASTG 3 cut(s) 248, 381, 1630
Van91I CCANNNNNTGG 1 cut(s) 346
VneI GTGCAC 1 cut(s) 335
XapI RAATTY 5 cut(s) 131, 554, 820, 895, 1200
XbaI TCTAGA 1 cut(s) 49
XceI RCATGY 3 cut(s) 109, 972, 1229
XcmI CCANNNNNNNNNTGG 1 cut(s) 1668
XhoI CTCGAG 1 cut(s) 1286
XmaJI CCTAGG 1 cut(s) 1759
XmiI GTMKAC 1 cut(s) 268
XspI CTAG 7 cut(s) 50, 756, 785, 1197, 1460, 1608, 1760
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.