Carbon catabolite repressor protein 4 homolog
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Exo_endo_phos | PF03372 | 298 - 622 | 4.9e-23 | Endonuclease/Exonuclease/phosphatase family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1656 |
| Acc36I | ACCTGC | 1 cut(s) | 693 |
| AccB1I | GGYRCC | 1 cut(s) | 227 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1441 |
| AccI | GTMKAC | 1 cut(s) | 1560 |
| AciI | CCGC | 3 cut(s) | 401, 794, 832 |
| AclWI | GGATC | 6 cut(s) | 12, 596, 920, 1129, 1452, 1577 |
| AcoI | YGGCCR | 2 cut(s) | 405, 1946 |
| AcsI | RAATTY | 6 cut(s) | 615, 881, 985, 1362, 1374, 1482 |
| AcuI | CTGAAG | 3 cut(s) | 144, 183, 1316 |
| AfaI | GTAC | 3 cut(s) | 678, 938, 1041 |
| AjnI | CCWGG | 1 cut(s) | 1434 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1703, 1735 |
| Alw21I | GWGCWC | 3 cut(s) | 318, 386, 662 |
| Alw26I | GTCTC | 5 cut(s) | 215, 363, 533, 1131, 1267 |
| AlwI | GGATC | 6 cut(s) | 12, 596, 920, 1129, 1452, 1577 |
| Ama87I | CYCGRG | 1 cut(s) | 311 |
| AoxI | GGCC | 3 cut(s) | 86, 405, 1946 |
| ApeKI | GCWGC | 2 cut(s) | 258, 1252 |
| ApoI | RAATTY | 6 cut(s) | 615, 881, 985, 1362, 1374, 1482 |
| AspLEI | GCGC | 1 cut(s) | 862 |
| AsuHPI | GGTGA | 3 cut(s) | 548, 1607, 1714 |
| AsuII | TTCGAA | 1 cut(s) | 1068 |
| AvaI | CYCGRG | 1 cut(s) | 311 |
| AxyI | CCTNAGG | 1 cut(s) | 60 |
| BaeGI | GKGCMC | 3 cut(s) | 230, 288, 1352 |
| BalI | TGGCCA | 2 cut(s) | 407, 1948 |
| BamHI | GGATCC | 1 cut(s) | 4 |
| BanI | GGYRCC | 1 cut(s) | 227 |
| BauI | CACGAG | 2 cut(s) | 279, 317 |
| BbsI | GAAGAC | 4 cut(s) | 61, 102, 244, 1022 |
| Bbv12I | GWGCWC | 3 cut(s) | 318, 386, 662 |
| BbvI | GCAGC | 2 cut(s) | 245, 1264 |
| BccI | CCATC | 8 cut(s) | 217, 522, 629, 1148, 1352, 1658, 1787, 1849 |
| BciT130I | CCWGG | 1 cut(s) | 1436 |
| BcoDI | GTCTC | 5 cut(s) | 215, 363, 533, 1131, 1267 |
| BfaI | CTAG | 3 cut(s) | 960, 1371, 1754 |
| BfmI | CTRYAG | 3 cut(s) | 259, 273, 700 |
| BfuAI | ACCTGC | 1 cut(s) | 693 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1877 |
| BisI | GCNGC | 2 cut(s) | 259, 1253 |
| BlsI | GCNGC | 2 cut(s) | 260, 1254 |
| Bme1390I | CCNGG | 1 cut(s) | 1436 |
| BmeT110I | CYCGRG | 1 cut(s) | 311 |
| BmiI | GGNNCC | 7 cut(s) | 6, 70, 229, 780, 1263, 1713, 1750 |
| BmrFI | CCNGG | 1 cut(s) | 1436 |
| BmrI | ACTGGG | 1 cut(s) | 655 |
| BmsI | GCATC | 5 cut(s) | 388, 699, 1234, 1612, 1655 |
| BmuI | ACTGGG | 1 cut(s) | 655 |
| BpiI | GAAGAC | 4 cut(s) | 61, 102, 244, 1022 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 644, 676, 1516, 1548 |
| Bpu14I | TTCGAA | 1 cut(s) | 1068 |
| BpuEI | CTTGAG | 2 cut(s) | 842, 1076 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1581 |
| BsaJI | CCNNGG | 2 cut(s) | 83, 907 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1703, 1733 |
| Bse1I | ACTGG | 8 cut(s) | 248, 415, 650, 745, 870, 1341, 1459, 1464 |
| Bse21I | CCTNAGG | 1 cut(s) | 60 |
| Bse3DI | GCAATG | 2 cut(s) | 463, 1247 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1581 |
| BseBI | CCWGG | 1 cut(s) | 1436 |
| BseDI | CCNNGG | 2 cut(s) | 83, 907 |
| BseGI | GGATG | 5 cut(s) | 228, 513, 1020, 1159, 1669 |
| BseJI | GATNNNNATC | 1 cut(s) | 1581 |
| BseMI | GCAATG | 2 cut(s) | 463, 1247 |
| BseMII | CTCAG | 5 cut(s) | 51, 477, 749, 1065, 1514 |
| BseNI | ACTGG | 8 cut(s) | 248, 415, 650, 745, 870, 1341, 1459, 1464 |
| BseRI | GAGGAG | 1 cut(s) | 1688 |
| BseSI | GKGCMC | 3 cut(s) | 230, 288, 1352 |
| BseXI | GCAGC | 2 cut(s) | 245, 1264 |
| BseYI | CCCAGC | 1 cut(s) | 1908 |
| BshFI | GGCC | 3 cut(s) | 88, 407, 1948 |
| BshNI | GGYRCC | 1 cut(s) | 227 |
| BsiHKAI | GWGCWC | 3 cut(s) | 318, 386, 662 |
| BsiHKCI | CYCGRG | 1 cut(s) | 311 |
| BslFI | GGGAC | 1 cut(s) | 857 |
| BsmAI | GTCTC | 5 cut(s) | 215, 363, 533, 1131, 1267 |
| BsmBI | CGTCTC | 1 cut(s) | 1131 |
| BsmFI | GGGAC | 1 cut(s) | 857 |
| BsnI | GGCC | 3 cut(s) | 88, 407, 1948 |
| BsoBI | CYCGRG | 1 cut(s) | 311 |
| Bsp119I | TTCGAA | 1 cut(s) | 1068 |
| Bsp1286I | GDGCHC | 6 cut(s) | 230, 288, 318, 386, 662, 1352 |
| BspACI | CCGC | 3 cut(s) | 401, 794, 832 |
| BspANI | GGCC | 3 cut(s) | 88, 407, 1948 |
| BspCNI | CTCAG | 5 cut(s) | 52, 478, 750, 1066, 1515 |
| BspHI | TCATGA | 1 cut(s) | 771 |
| BspLI | GGNNCC | 7 cut(s) | 6, 70, 229, 780, 1263, 1713, 1750 |
| BspMAI | CTGCAG | 2 cut(s) | 263, 704 |
| BspMI | ACCTGC | 1 cut(s) | 693 |
| BspPI | GGATC | 6 cut(s) | 12, 596, 920, 1129, 1452, 1577 |
| BspQI | GCTCTTC | 1 cut(s) | 667 |
| BspT104I | TTCGAA | 1 cut(s) | 1068 |
| BspT107I | GGYRCC | 1 cut(s) | 227 |
| BsrDI | GCAATG | 2 cut(s) | 463, 1247 |
| BsrI | ACTGG | 8 cut(s) | 248, 415, 650, 745, 870, 1341, 1459, 1464 |
| BssECI | CCNNGG | 2 cut(s) | 83, 907 |
| BssSI | CACGAG | 2 cut(s) | 279, 317 |
| BssT1I | CCWWGG | 2 cut(s) | 83, 907 |
| Bst2BI | CACGAG | 2 cut(s) | 279, 317 |
| Bst2UI | CCWGG | 1 cut(s) | 1436 |
| Bst4CI | ACNGT | 4 cut(s) | 685, 778, 1817, 1884 |
| Bst6I | CTCTTC | 6 cut(s) | 79, 564, 667, 1106, 1111, 1521 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1934 |
| BstBI | TTCGAA | 1 cut(s) | 1068 |
| BstC8I | GCNNGC | 2 cut(s) | 584, 1552 |
| BstDEI | CTNAG | 6 cut(s) | 60, 486, 720, 758, 1074, 1523 |
| BstF5I | GGATG | 5 cut(s) | 228, 513, 1020, 1159, 1669 |
| BstHHI | GCGC | 1 cut(s) | 862 |
| BstMAI | GTCTC | 5 cut(s) | 215, 363, 533, 1131, 1267 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1609, 1877, 1934 |
| BstNI | CCWGG | 1 cut(s) | 1436 |
| BstSCI | CCNGG | 1 cut(s) | 1434 |
| BstSFI | CTRYAG | 3 cut(s) | 259, 273, 700 |
| BstSLI | GKGCMC | 3 cut(s) | 230, 288, 1352 |
| BstV1I | GCAGC | 2 cut(s) | 245, 1264 |
| BstV2I | GAAGAC | 4 cut(s) | 61, 102, 244, 1022 |
| BstX2I | RGATCY | 3 cut(s) | 4, 601, 1444 |
| BstYI | RGATCY | 3 cut(s) | 4, 601, 1444 |
| Bsu36I | CCTNAGG | 1 cut(s) | 60 |
| BsuRI | GGCC | 3 cut(s) | 88, 407, 1948 |
| BtgZI | GCGATG | 1 cut(s) | 1371 |
| BtsCI | GGATG | 5 cut(s) | 228, 513, 1020, 1159, 1669 |
| BtsIMutI | CAGTG | 6 cut(s) | 422, 605, 643, 690, 877, 1628 |
| BveI | ACCTGC | 1 cut(s) | 693 |
| Cac8I | GCNNGC | 2 cut(s) | 584, 1552 |
| CciI | TCATGA | 1 cut(s) | 771 |
| CfoI | GCGC | 1 cut(s) | 862 |
| CseI | GACGC | 1 cut(s) | 1795 |
| Csp6I | GTAC | 3 cut(s) | 677, 937, 1040 |
| CviAII | CATG | 6 cut(s) | 492, 772, 817, 1013, 1150, 1876 |
| CviQI | GTAC | 3 cut(s) | 677, 937, 1040 |
| DdeI | CTNAG | 6 cut(s) | 60, 486, 720, 758, 1074, 1523 |
| EaeI | YGGCCR | 2 cut(s) | 405, 1946 |
| Eam1104I | CTCTTC | 6 cut(s) | 79, 564, 667, 1106, 1111, 1521 |
| EarI | CTCTTC | 6 cut(s) | 79, 564, 667, 1106, 1111, 1521 |
| Eco130I | CCWWGG | 2 cut(s) | 83, 907 |
| Eco147I | AGGCCT | 1 cut(s) | 88 |
| Eco57I | CTGAAG | 3 cut(s) | 144, 183, 1316 |
| Eco81I | CCTNAGG | 1 cut(s) | 60 |
| Eco88I | CYCGRG | 1 cut(s) | 311 |
| EcoRI | GAATTC | 1 cut(s) | 1362 |
| EcoRII | CCWGG | 1 cut(s) | 1434 |
| EcoT14I | CCWWGG | 2 cut(s) | 83, 907 |
| EcoT22I | ATGCAT | 2 cut(s) | 1249, 1648 |
| ErhI | CCWWGG | 2 cut(s) | 83, 907 |
| Esp3I | CGTCTC | 1 cut(s) | 1131 |
| FaeI | CATG | 6 cut(s) | 495, 775, 820, 1016, 1153, 1879 |
| FaqI | GGGAC | 1 cut(s) | 857 |
| FatI | CATG | 6 cut(s) | 491, 771, 816, 1012, 1149, 1875 |
| FauI | CCCGC | 1 cut(s) | 801 |
| FauNDI | CATATG | 2 cut(s) | 1595, 1642 |
| FblI | GTMKAC | 1 cut(s) | 1560 |
| Fnu4HI | GCNGC | 2 cut(s) | 259, 1253 |
| FokI | GGATG | 5 cut(s) | 235, 520, 1007, 1166, 1676 |
| Fsp4HI | GCNGC | 2 cut(s) | 259, 1253 |
| FspBI | CTAG | 3 cut(s) | 960, 1371, 1754 |
| GlaI | GCGC | 1 cut(s) | 861 |
| GluI | GCNGC | 2 cut(s) | 259, 1253 |
| GsaI | CCCAGC | 1 cut(s) | 1912 |
| HaeIII | GGCC | 3 cut(s) | 88, 407, 1948 |
| HgaI | GACGC | 1 cut(s) | 1795 |
| HhaI | GCGC | 1 cut(s) | 862 |
| Hin1II | CATG | 6 cut(s) | 495, 775, 820, 1016, 1153, 1879 |
| Hin6I | GCGC | 1 cut(s) | 860 |
| HinP1I | GCGC | 1 cut(s) | 860 |
| HincII | GTYRAC | 1 cut(s) | 1561 |
| HindII | GTYRAC | 1 cut(s) | 1561 |
| HindIII | AAGCTT | 2 cut(s) | 836, 1610 |
| HinfI | GANTC | 5 cut(s) | 204, 264, 716, 845, 1557 |
| HphI | GGTGA | 3 cut(s) | 548, 1607, 1714 |
| Hpy166II | GTNNAC | 4 cut(s) | 391, 1561, 1722, 1922 |
| Hpy188I | TCNGA | 8 cut(s) | 487, 550, 804, 850, 1449, 1524, 1702, 1861 |
| Hpy188III | TCNNGA | 6 cut(s) | 51, 341, 746, 772, 1034, 1055 |
| Hpy8I | GTNNAC | 4 cut(s) | 391, 1561, 1722, 1922 |
| Hpy99I | CGWCG | 1 cut(s) | 1179 |
| HpyAV | CCTTC | 3 cut(s) | 286, 366, 1294 |
| HpyCH4III | ACNGT | 4 cut(s) | 685, 778, 1817, 1884 |
| HpyCH4IV | ACGT | 2 cut(s) | 216, 1684 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1609, 1877, 1934 |
| HpyF3I | CTNAG | 6 cut(s) | 60, 486, 720, 758, 1074, 1523 |
| HpySE526I | ACGT | 2 cut(s) | 216, 1684 |
| Hsp92II | CATG | 6 cut(s) | 495, 775, 820, 1016, 1153, 1879 |
| HspAI | GCGC | 1 cut(s) | 860 |
| LguI | GCTCTTC | 1 cut(s) | 667 |
| LmnI | GCTCC | 4 cut(s) | 818, 1419, 1711, 1804 |
| Lsp1109I | GCAGC | 2 cut(s) | 245, 1264 |
| LweI | GCATC | 5 cut(s) | 388, 699, 1234, 1612, 1655 |
| MaeI | CTAG | 3 cut(s) | 960, 1371, 1754 |
| MaeII | ACGT | 2 cut(s) | 216, 1684 |
| MaeIII | GTNAC | 3 cut(s) | 441, 761, 1817 |
| MflI | RGATCY | 3 cut(s) | 4, 601, 1444 |
| MhlI | GDGCHC | 6 cut(s) | 230, 288, 318, 386, 662, 1352 |
| MlsI | TGGCCA | 2 cut(s) | 407, 1948 |
| MluNI | TGGCCA | 2 cut(s) | 407, 1948 |
| MlyI | GAGTC | 2 cut(s) | 839, 1566 |
| MmeI | TCCRAC | 1 cut(s) | 1782 |
| Mox20I | TGGCCA | 2 cut(s) | 407, 1948 |
| Mph1103I | ATGCAT | 2 cut(s) | 1249, 1648 |
| MscI | TGGCCA | 2 cut(s) | 407, 1948 |
| MseI | TTAA | 1 cut(s) | 696 |
| MslI | CAYNNNNRTG | 3 cut(s) | 396, 519, 770 |
| Msp20I | TGGCCA | 2 cut(s) | 407, 1948 |
| MspA1I | CMGCKG | 1 cut(s) | 832 |
| MspR9I | CCNGG | 1 cut(s) | 1436 |
| MvaI | CCWGG | 1 cut(s) | 1436 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1609, 1877, 1934 |
| NdeI | CATATG | 2 cut(s) | 1595, 1642 |
| NlaIII | CATG | 6 cut(s) | 495, 775, 820, 1016, 1153, 1879 |
| NlaIV | GGNNCC | 7 cut(s) | 6, 70, 229, 780, 1263, 1713, 1750 |
| NmuCI | GTSAC | 2 cut(s) | 761, 1817 |
| NsiI | ATGCAT | 2 cut(s) | 1249, 1648 |
| NspV | TTCGAA | 1 cut(s) | 1068 |
| PagI | TCATGA | 1 cut(s) | 771 |
| PceI | AGGCCT | 1 cut(s) | 88 |
| PciSI | GCTCTTC | 1 cut(s) | 667 |
| PfeI | GAWTC | 3 cut(s) | 204, 264, 716 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1441 |
| PkrI | GCNGC | 2 cut(s) | 260, 1254 |
| PleI | GAGTC | 2 cut(s) | 839, 1565 |
| PpsI | GAGTC | 2 cut(s) | 839, 1565 |
| PsiI | TTATAA | 1 cut(s) | 1656 |
| Psp6I | CCWGG | 1 cut(s) | 1434 |
| PspFI | CCCAGC | 1 cut(s) | 1908 |
| PspGI | CCWGG | 1 cut(s) | 1434 |
| PspN4I | GGNNCC | 7 cut(s) | 6, 70, 229, 780, 1263, 1713, 1750 |
| PstI | CTGCAG | 2 cut(s) | 263, 704 |
| PsuI | RGATCY | 3 cut(s) | 4, 601, 1444 |
| RsaI | GTAC | 3 cut(s) | 678, 938, 1041 |
| RsaNI | GTAC | 3 cut(s) | 677, 937, 1040 |
| RseI | CAYNNNNRTG | 3 cut(s) | 396, 519, 770 |
| SalI | GTCGAC | 1 cut(s) | 1559 |
| SapI | GCTCTTC | 1 cut(s) | 667 |
| SaqAI | TTAA | 1 cut(s) | 696 |
| SatI | GCNGC | 2 cut(s) | 259, 1253 |
| SchI | GAGTC | 2 cut(s) | 839, 1566 |
| ScrFI | CCNGG | 1 cut(s) | 1436 |
| SduI | GDGCHC | 6 cut(s) | 230, 288, 318, 386, 662, 1352 |
| SfaNI | GCATC | 5 cut(s) | 388, 699, 1234, 1612, 1655 |
| SfcI | CTRYAG | 3 cut(s) | 259, 273, 700 |
| SfuI | TTCGAA | 1 cut(s) | 1068 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 396, 519, 770 |
| SmlI | CTYRAG | 2 cut(s) | 821, 1055 |
| SmoI | CTYRAG | 2 cut(s) | 821, 1055 |
| SseBI | AGGCCT | 1 cut(s) | 88 |
| SsiI | CCGC | 3 cut(s) | 401, 794, 832 |
| SspMI | CTAG | 3 cut(s) | 960, 1371, 1754 |
| StuI | AGGCCT | 1 cut(s) | 88 |
| StyD4I | CCNGG | 1 cut(s) | 1434 |
| StyI | CCWWGG | 2 cut(s) | 83, 907 |
| TaaI | ACNGT | 4 cut(s) | 685, 778, 1817, 1884 |
| TaiI | ACGT | 2 cut(s) | 219, 1687 |
| TaqI | TCGA | 5 cut(s) | 52, 267, 1068, 1560, 1671 |
| TfiI | GAWTC | 3 cut(s) | 204, 264, 716 |
| Tru1I | TTAA | 1 cut(s) | 696 |
| Tru9I | TTAA | 1 cut(s) | 696 |
| TscAI | CASTG | 6 cut(s) | 422, 612, 650, 690, 877, 1635 |
| TseFI | GTSAC | 2 cut(s) | 761, 1817 |
| TseI | GCWGC | 2 cut(s) | 258, 1252 |
| Tsp45I | GTSAC | 2 cut(s) | 761, 1817 |
| TspDTI | ATGAA | 5 cut(s) | 171, 315, 627, 1493, 1531 |
| TspGWI | ACGGA | 1 cut(s) | 918 |
| TspRI | CASTG | 6 cut(s) | 422, 612, 650, 690, 877, 1635 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1441 |
| XapI | RAATTY | 6 cut(s) | 615, 881, 985, 1362, 1374, 1482 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1848 |
| XmiI | GTMKAC | 1 cut(s) | 1560 |
| XspI | CTAG | 3 cut(s) | 960, 1371, 1754 |
| Zsp2I | ATGCAT | 2 cut(s) | 1249, 1648 |