Rroxscaffold_3G00237980

Carbon catabolite repressor protein 4 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0001088
Physical Location & Seq
Reverse (-)
25842294 .. 25848107
5814 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00237980.1

Sequence Viewer

Length: 1839 bp
ATGGATCCTGCACGCAATGCGGGTTCTCATGCCCGGAATCTGGGAACGGGTTCCCTTTCTCGCCAAAAAGCTACGAGGAAAGAACGGGCCTCTTCTTGTTCTTCTTCATCGACATGCCAATTCAGACTTCAAGGAATGATGGGCACAAAACGCAGGGTCACTCCAGTTTTTGGCTGTAAAATCGACCTAGAAGCTCGCGTATACAGGAACAACACCACCACCTTCCATGAAGAACCCCCAAGCATGAGATCACGTACAGATGGTCAGTCTTTGTATCGGGAGTATGTTAGCTCTTCTTCCCCCACAGACAAGATCAAGTGTTCTGTACACCCTGATCAAGTAGCCACTGTGCAGTGCAGAGGCTGTGTGAAACTGAAGTTATCTCTTACCGGAAGCTACCATTGTTCTTCTGAATGTTATTATAATTCCCCCGAAAGACACAGGATGTGCCATCGTTGCGCTAAAACTTTTGGTGAGACATCTATTGAGGAAGAAGAGATGCTCTCAGGGTTGGCTTCAGCTCAAGATTCATTGGAAAGTCCAACACTAGAAAGAGATGGAAAACAGTGGGTTGAGGTGTGCTCTTCAAAGTCTTACTCTCCCACAGCACATGACATTGGCTGCAGTTTACTTCTACAGTTCAAGGCTGTAGATATTTCAGATGGTATTGATCTGTGCCCATGTGACTTTATCACAACCGATAAAGTGTTGTATCCGCCTGGCCAGAAACCTCGCTCTATACTCAGTTACTGTTGGAAGTCTGCAGCCTTTGATATCAGAGAACCATGTTCAGAGGGTGCAAGGATTAGTATACTGACCTACAACATACTTGCCAGTTGTTATGTCAACCAGAAGAAGTACCCGGCCTGTGCAGAATGGGCTCGTTCTTGGGAATATCGAAGACACAATTTACTTCATGAAATTACTGGGTATGATGCAGACATCCTCTGTCTTCAAGAGGTACAAAGTAATCATCTTGAGAATTTCTTCAGGCCTGAGTTGGAAAAATGCGGATACTCTGTTCTATATAAGAGAAGAAGAGCAAGTCGTGCGTTTGATAGCTCTATATTGAGAGCGATTGAAGAATTGCAGCCATTGGAAGCTGAAGGGCCAGATGAAGCTTTTCAAAGGCTGAAGAAGTCTGAGTCTGATAGCTCTTTAATGAGAGTTATGGAAGCATTGGAACCCTTGGAACCGAAACAGAGAAATGAAGCTTTTGAAAGGCTGAAGAAGGATAATGTTGCACTCATCGTTATATTAGAAAAACTGGAAAGTGAGGGCACTTGTGATGGCATTCAACCTAGAATTTGCGTGGTTGTGGACCTGATTACTGGACTGGACAAAATTGCTGAGATGAAAATTCCTCTGTTGGTTTGTGGAGATTTCAATTCTCTTCCTCTGAGTGAGCCTCATAGGTTCATAACTGCTGGCCGACTTGAGAATCTTCCCAAGAAGGACAAGAATAGTGATCCATTTGGCATATGTCAGCATCTAAACCTTCACCATTCAACTCAACTGAAAAGTGCATATGCATCATTCCGCAACTCAGATGGTATCGAGGAGGAACAACGTAGGAAGTTCAATTCTGAAAGCCAGGAGCCTTTGTTTACTCACTTCACATCAAGTTTCACAGGAACCCTCGATTACATATTCTACACAGAGGATAGTTTGAAGCTTGATGGTGTGTTGGAGCTACTTGACCGTGACAATCTGGGAGTTGGTATTCCATCTCTTCTTTGGTCATCAGATCATATTGCCCTCATGGCACGGTTTGTCCTCAATTCAACCTCTCCCCAGCAACAGGGCTCACAAGCAATTCCTGCTAAACTGTGGCCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
Exo_endo_phos zf-C6H2

Protein Analysis

612

Amino Acids

69.03

Weight (kDa)

6.38

Isoelectric Point (pI)

54.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo_endo_phos PF03372 272 - 584 6.4e-18 Endonuclease/Exonuclease/phosphatase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 423
AccB7I CCANNNNNTGG 1 cut(s) 170
AccI GTMKAC 2 cut(s) 201, 811
AccII CGCG 1 cut(s) 198
AciI CCGC 4 cut(s) 20, 716, 1011, 1540
AclWI GGATC 2 cut(s) 12, 1463
AcoI YGGCCR 3 cut(s) 721, 1429, 1832
AcsI RAATTY 3 cut(s) 982, 1305, 1359
AcuI CTGAAG 6 cut(s) 395, 501, 973, 1125, 1154, 1247
AfaI GTAC 4 cut(s) 256, 327, 860, 963
AfiI CCNNNNNNNGG 3 cut(s) 40, 170, 1801
AjnI CCWGG 2 cut(s) 718, 1593
AjuI GAANNNNNNNTTGG 2 cut(s) 111, 143
AloI GAACNNNNNNTCC 2 cut(s) 1005, 1037
Alw21I GWGCWC 1 cut(s) 584
Alw26I GTCTC 1 cut(s) 470
AlwI GGATC 2 cut(s) 12, 1463
AlwNI CAGNNNCTG 2 cut(s) 363, 750
AoxI GGCC 7 cut(s) 87, 721, 864, 992, 1109, 1429, 1832
ApeKI GCWGC 3 cut(s) 621, 764, 1090
ApoI RAATTY 3 cut(s) 982, 1305, 1359
Asp700I GAANNNNTTC 3 cut(s) 49, 986, 1122
AspLEI GCGC 1 cut(s) 461
AspS9I GGNCC 3 cut(s) 87, 1109, 1321
AsuC2I CCSGG 2 cut(s) 34, 863
AsuHPI GGTGA 2 cut(s) 485, 1493
AvaII GGWCC 1 cut(s) 1321
BaeGI GKGCMC 3 cut(s) 146, 680, 1283
BalI TGGCCA 1 cut(s) 723
BamHI GGATCC 1 cut(s) 4
BanII GRGCYC 2 cut(s) 883, 1808
BbsI GAAGAC 2 cut(s) 907, 944
Bbv12I GWGCWC 1 cut(s) 584
BbvI GCAGC 3 cut(s) 608, 776, 1102
BccI CCATC 9 cut(s) 133, 254, 459, 551, 656, 1283, 1544, 1673, 1735
BceAI ACGGC 1 cut(s) 1819
BciT130I CCWGG 2 cut(s) 720, 1595
BciVI GTATCC 2 cut(s) 723, 1007
BclI TGATCA 1 cut(s) 334
BcnI CCSGG 2 cut(s) 34, 863
BcoDI GTCTC 1 cut(s) 470
BfaI CTAG 3 cut(s) 188, 548, 1302
BfmI CTRYAG 4 cut(s) 622, 635, 648, 762
BfuI GTATCC 2 cut(s) 723, 1007
BglI GCCNNNNNGGC 1 cut(s) 1763
BisI GCNGC 3 cut(s) 622, 765, 1091
BlsI GCNGC 3 cut(s) 623, 766, 1092
Bme1390I CCNGG 4 cut(s) 34, 720, 863, 1595
Bme18I GGWCC 1 cut(s) 1321
BmgT120I GGNCC 3 cut(s) 87, 1109, 1321
BmiI GGNNCC 6 cut(s) 6, 52, 1185, 1194, 1599, 1636
BmrFI CCNGG 4 cut(s) 34, 720, 863, 1595
BmrI ACTGGG 1 cut(s) 936
BmsI GCATC 4 cut(s) 489, 925, 1498, 1541
BmuI ACTGGG 1 cut(s) 936
BpiI GAAGAC 2 cut(s) 907, 944
BplI GAGNNNNNCTC 6 cut(s) 488, 520, 566, 598, 1393, 1425
BpmI CTGGAG 1 cut(s) 147
BpuEI CTTGAG 3 cut(s) 507, 998, 1457
BpuMI CCSGG 2 cut(s) 34, 863
BsaAI YACGTR 1 cut(s) 254
BsaJI CCNNGG 1 cut(s) 1188
BsaWI WCCGGW 1 cut(s) 389
BsaXI ACNNNNNCTCC 2 cut(s) 1589, 1619
Bsc4I CCNNNNNNNGG 3 cut(s) 40, 170, 1801
Bse1I ACTGG 6 cut(s) 164, 834, 931, 1272, 1336, 1341
Bse3DI GCAATG 1 cut(s) 22
BseBI CCWGG 2 cut(s) 720, 1595
BseDI CCNNGG 1 cut(s) 1188
BseGI GGATG 2 cut(s) 450, 942
BseLI CCNNNNNNNGG 3 cut(s) 40, 170, 1801
BseMI GCAATG 1 cut(s) 22
BseMII CTCAG 7 cut(s) 519, 757, 987, 1134, 1341, 1391, 1560
BseNI ACTGG 6 cut(s) 164, 834, 931, 1272, 1336, 1341
BseRI GAGGAG 1 cut(s) 1574
BseSI GKGCMC 3 cut(s) 146, 680, 1283
BseXI GCAGC 3 cut(s) 608, 776, 1102
BseYI CCCAGC 1 cut(s) 1794
BsgI GTGCAG 3 cut(s) 371, 376, 891
Bsh1236I CGCG 1 cut(s) 198
BshFI GGCC 7 cut(s) 89, 723, 866, 994, 1111, 1431, 1834
BsiHKAI GWGCWC 1 cut(s) 584
BsiSI CCGG 3 cut(s) 34, 390, 863
BslI CCNNNNNNNGG 3 cut(s) 40, 170, 1801
BsmAI GTCTC 1 cut(s) 470
BsmI GAATGC 1 cut(s) 1293
BsnI GGCC 7 cut(s) 89, 723, 866, 994, 1111, 1431, 1834
Bsp1286I GDGCHC 6 cut(s) 146, 584, 680, 883, 1283, 1808
Bsp1407I TGTACA 1 cut(s) 325
Bsp143I GATC 7 cut(s) 4, 248, 312, 334, 670, 1468, 1747
BspACI CCGC 4 cut(s) 20, 716, 1011, 1540
BspANI GGCC 7 cut(s) 89, 723, 866, 994, 1111, 1431, 1834
BspCNI CTCAG 7 cut(s) 518, 756, 988, 1135, 1342, 1392, 1559
BspFNI CGCG 1 cut(s) 198
BspHI TCATGA 1 cut(s) 916
BspLI GGNNCC 6 cut(s) 6, 52, 1185, 1194, 1599, 1636
BspMAI CTGCAG 2 cut(s) 626, 766
BspPI GGATC 2 cut(s) 12, 1463
BspQI GCTCTTC 3 cut(s) 298, 589, 1033
BsrDI GCAATG 1 cut(s) 22
BsrGI TGTACA 1 cut(s) 325
BsrI ACTGG 6 cut(s) 164, 834, 931, 1272, 1336, 1341
BssECI CCNNGG 1 cut(s) 1188
BssMI GATC 7 cut(s) 4, 248, 312, 334, 670, 1468, 1747
BssNAI GTATAC 2 cut(s) 202, 812
BssT1I CCWWGG 1 cut(s) 1188
Bst1107I GTATAC 2 cut(s) 202, 812
Bst2UI CCWGG 2 cut(s) 720, 1595
Bst4CI ACNGT 7 cut(s) 349, 567, 639, 752, 1703, 1770, 1830
Bst6I CTCTTC 7 cut(s) 97, 298, 489, 589, 1033, 1398, 1737
BstAPI GCANNNNNTGC 3 cut(s) 17, 1049, 1820
BstAUI TGTACA 1 cut(s) 325
BstBAI YACGTR 1 cut(s) 254
BstC8I GCNNGC 3 cut(s) 13, 196, 1429
BstDEI CTNAG 7 cut(s) 505, 743, 996, 1143, 1350, 1400, 1546
BstF5I GGATG 2 cut(s) 450, 942
BstFNI CGCG 1 cut(s) 198
BstHHI GCGC 1 cut(s) 461
BstKTI GATC 7 cut(s) 7, 251, 315, 337, 673, 1471, 1750
BstMAI GTCTC 1 cut(s) 470
BstMBI GATC 7 cut(s) 4, 248, 312, 334, 670, 1468, 1747
BstMWI GCNNNNNNNGC 7 cut(s) 17, 150, 456, 878, 1049, 1763, 1820
BstNI CCWGG 2 cut(s) 720, 1595
BstNSI RCATGY 1 cut(s) 117
BstSCI CCNGG 4 cut(s) 32, 718, 861, 1593
BstSFI CTRYAG 4 cut(s) 622, 635, 648, 762
BstSLI GKGCMC 3 cut(s) 146, 680, 1283
BstUI CGCG 1 cut(s) 198
BstV1I GCAGC 3 cut(s) 608, 776, 1102
BstV2I GAAGAC 2 cut(s) 907, 944
BstX2I RGATCY 1 cut(s) 4
BstYI RGATCY 1 cut(s) 4
BstZ17I GTATAC 2 cut(s) 202, 812
BsuI GTATCC 2 cut(s) 723, 1007
BsuRI GGCC 7 cut(s) 89, 723, 866, 994, 1111, 1431, 1834
BtsCI GGATG 2 cut(s) 450, 942
BtsI GCAGTG 1 cut(s) 359
BtsIMutI CAGTG 3 cut(s) 345, 359, 572
Cac8I GCNNGC 3 cut(s) 13, 196, 1429
CaiI CAGNNNCTG 2 cut(s) 363, 750
CciI TCATGA 1 cut(s) 916
CfoI GCGC 1 cut(s) 461
Cfr13I GGNCC 3 cut(s) 87, 1109, 1321
Csp6I GTAC 4 cut(s) 255, 326, 859, 962
CviAII CATG 9 cut(s) 29, 114, 227, 244, 611, 681, 786, 917, 1762
CviQI GTAC 4 cut(s) 255, 326, 859, 962
DdeI CTNAG 7 cut(s) 505, 743, 996, 1143, 1350, 1400, 1546
DpnI GATC 7 cut(s) 6, 250, 314, 336, 672, 1470, 1749
DpnII GATC 7 cut(s) 4, 248, 312, 334, 670, 1468, 1747
EaeI YGGCCR 3 cut(s) 721, 1429, 1832
Eam1104I CTCTTC 7 cut(s) 97, 298, 489, 589, 1033, 1398, 1737
EarI CTCTTC 7 cut(s) 97, 298, 489, 589, 1033, 1398, 1737
EciI GGCGGA 1 cut(s) 705
Eco130I CCWWGG 1 cut(s) 1188
Eco147I AGGCCT 1 cut(s) 994
Eco24I GRGCYC 2 cut(s) 883, 1808
Eco32I GATATC 1 cut(s) 775
Eco47I GGWCC 1 cut(s) 1321
Eco57I CTGAAG 6 cut(s) 395, 501, 973, 1125, 1154, 1247
EcoRII CCWGG 2 cut(s) 718, 1593
EcoRV GATATC 1 cut(s) 775
EcoT14I CCWWGG 1 cut(s) 1188
EcoT22I ATGCAT 1 cut(s) 1534
EcoT38I GRGCYC 2 cut(s) 883, 1808
ErhI CCWWGG 1 cut(s) 1188
FaeI CATG 9 cut(s) 32, 117, 230, 247, 614, 684, 789, 920, 1765
FatI CATG 9 cut(s) 28, 113, 226, 243, 610, 680, 785, 916, 1761
FauI CCCGC 1 cut(s) 13
FauNDI CATATG 2 cut(s) 1481, 1528
FbaI TGATCA 1 cut(s) 334
FblI GTMKAC 2 cut(s) 201, 811
Fnu4HI GCNGC 3 cut(s) 622, 765, 1091
FokI GGATG 2 cut(s) 457, 929
FriOI GRGCYC 2 cut(s) 883, 1808
Fsp4HI GCNGC 3 cut(s) 622, 765, 1091
FspBI CTAG 3 cut(s) 188, 548, 1302
GlaI GCGC 1 cut(s) 460
GluI GCNGC 3 cut(s) 622, 765, 1091
GsaI CCCAGC 1 cut(s) 1798
GsuI CTGGAG 1 cut(s) 147
HaeIII GGCC 7 cut(s) 89, 723, 866, 994, 1111, 1431, 1834
HapII CCGG 3 cut(s) 34, 390, 863
HhaI GCGC 1 cut(s) 461
Hin1II CATG 9 cut(s) 32, 117, 230, 247, 614, 684, 789, 920, 1765
Hin6I GCGC 1 cut(s) 459
HinP1I GCGC 1 cut(s) 459
HincII GTYRAC 1 cut(s) 847
HindII GTYRAC 1 cut(s) 847
HindIII AAGCTT 3 cut(s) 1119, 1212, 1673
HinfI GANTC 4 cut(s) 37, 527, 1145, 1441
HpaII CCGG 3 cut(s) 34, 390, 863
HphI GGTGA 2 cut(s) 485, 1493
Hpy166II GTNNAC 7 cut(s) 202, 328, 629, 812, 847, 1321, 1608
Hpy188III TCNNGA 5 cut(s) 278, 524, 917, 956, 977
Hpy8I GTNNAC 7 cut(s) 202, 328, 629, 812, 847, 1321, 1608
HpyAV CCTTC 5 cut(s) 232, 1100, 1225, 1447, 1508
HpyCH4III ACNGT 7 cut(s) 349, 567, 639, 752, 1703, 1770, 1830
HpyCH4IV ACGT 2 cut(s) 253, 1570
HpyF10VI GCNNNNNNNGC 7 cut(s) 17, 150, 456, 878, 1049, 1763, 1820
HpyF3I CTNAG 7 cut(s) 505, 743, 996, 1143, 1350, 1400, 1546
HpySE526I ACGT 2 cut(s) 253, 1570
Hsp92II CATG 9 cut(s) 32, 117, 230, 247, 614, 684, 789, 920, 1765
HspAI GCGC 1 cut(s) 459
Ksp22I TGATCA 1 cut(s) 334
Kzo9I GATC 7 cut(s) 4, 248, 312, 334, 670, 1468, 1747
LguI GCTCTTC 3 cut(s) 298, 589, 1033
LmnI GCTCC 2 cut(s) 1597, 1690
Lsp1109I GCAGC 3 cut(s) 608, 776, 1102
LweI GCATC 4 cut(s) 489, 925, 1498, 1541
MaeI CTAG 3 cut(s) 188, 548, 1302
MaeII ACGT 2 cut(s) 253, 1570
MaeIII GTNAC 4 cut(s) 157, 683, 746, 1703
MalI GATC 7 cut(s) 6, 250, 314, 336, 672, 1470, 1749
MboI GATC 7 cut(s) 4, 248, 312, 334, 670, 1468, 1747
MflI RGATCY 1 cut(s) 4
MhlI GDGCHC 6 cut(s) 146, 584, 680, 883, 1283, 1808
MlsI TGGCCA 1 cut(s) 723
MluNI TGGCCA 1 cut(s) 723
MlyI GAGTC 1 cut(s) 1154
MmeI TCCRAC 4 cut(s) 566, 734, 981, 1668
Mox20I TGGCCA 1 cut(s) 723
Mph1103I ATGCAT 1 cut(s) 1534
MroXI GAANNNNTTC 3 cut(s) 49, 986, 1122
MscI TGGCCA 1 cut(s) 723
MseI TTAA 1 cut(s) 1160
MslI CAYNNNNRTG 1 cut(s) 112
Msp20I TGGCCA 1 cut(s) 723
MspI CCGG 3 cut(s) 34, 390, 863
MspR9I CCNGG 4 cut(s) 34, 720, 863, 1595
Mva1269I GAATGC 1 cut(s) 1293
MvaI CCWGG 2 cut(s) 720, 1595
MvnI CGCG 1 cut(s) 198
MwoI GCNNNNNNNGC 7 cut(s) 17, 150, 456, 878, 1049, 1763, 1820
NciI CCSGG 2 cut(s) 34, 863
NdeI CATATG 2 cut(s) 1481, 1528
NdeII GATC 7 cut(s) 4, 248, 312, 334, 670, 1468, 1747
NlaIII CATG 9 cut(s) 32, 117, 230, 247, 614, 684, 789, 920, 1765
NlaIV GGNNCC 6 cut(s) 6, 52, 1185, 1194, 1599, 1636
NmuCI GTSAC 3 cut(s) 157, 683, 1703
NsiI ATGCAT 1 cut(s) 1534
NspI RCATGY 1 cut(s) 117
PagI TCATGA 1 cut(s) 916
PceI AGGCCT 1 cut(s) 994
PciSI GCTCTTC 3 cut(s) 298, 589, 1033
PctI GAATGC 1 cut(s) 1293
PdmI GAANNNNTTC 3 cut(s) 49, 986, 1122
PfeI GAWTC 3 cut(s) 37, 527, 1441
PflMI CCANNNNNTGG 1 cut(s) 170
PkrI GCNGC 3 cut(s) 623, 766, 1092
PleI GAGTC 1 cut(s) 1153
PpsI GAGTC 1 cut(s) 1153
Ppu21I YACGTR 1 cut(s) 254
PsiI TTATAA 1 cut(s) 423
Psp6I CCWGG 2 cut(s) 718, 1593
PspFI CCCAGC 1 cut(s) 1794
PspGI CCWGG 2 cut(s) 718, 1593
PspN4I GGNNCC 6 cut(s) 6, 52, 1185, 1194, 1599, 1636
PspPI GGNCC 3 cut(s) 87, 1109, 1321
PstI CTGCAG 2 cut(s) 626, 766
PstNI CAGNNNCTG 2 cut(s) 363, 750
PsuI RGATCY 1 cut(s) 4
RsaI GTAC 4 cut(s) 256, 327, 860, 963
RsaNI GTAC 4 cut(s) 255, 326, 859, 962
RseI CAYNNNNRTG 1 cut(s) 112
SapI GCTCTTC 3 cut(s) 298, 589, 1033
SaqAI TTAA 1 cut(s) 1160
SatI GCNGC 3 cut(s) 622, 765, 1091
Sau3AI GATC 7 cut(s) 4, 248, 312, 334, 670, 1468, 1747
Sau96I GGNCC 3 cut(s) 87, 1109, 1321
SchI GAGTC 1 cut(s) 1154
ScrFI CCNGG 4 cut(s) 34, 720, 863, 1595
SduI GDGCHC 6 cut(s) 146, 584, 680, 883, 1283, 1808
SfaNI GCATC 4 cut(s) 489, 925, 1498, 1541
SfcI CTRYAG 4 cut(s) 622, 635, 648, 762
SinI GGWCC 1 cut(s) 1321
SmiMI CAYNNNNRTG 1 cut(s) 112
SmlI CTYRAG 3 cut(s) 522, 977, 1436
SmoI CTYRAG 3 cut(s) 522, 977, 1436
SseBI AGGCCT 1 cut(s) 994
SsiI CCGC 4 cut(s) 20, 716, 1011, 1540
SspMI CTAG 3 cut(s) 188, 548, 1302
StuI AGGCCT 1 cut(s) 994
StyD4I CCNGG 4 cut(s) 32, 718, 861, 1593
StyI CCWWGG 1 cut(s) 1188
TaaI ACNGT 7 cut(s) 349, 567, 639, 752, 1703, 1770, 1830
TaiI ACGT 2 cut(s) 256, 1573
TaqI TCGA 5 cut(s) 110, 183, 898, 1557, 1641
TatI WGTACW 1 cut(s) 325
TfiI GAWTC 3 cut(s) 37, 527, 1441
Tru1I TTAA 1 cut(s) 1160
Tru9I TTAA 1 cut(s) 1160
TscAI CASTG 3 cut(s) 352, 359, 572
TseFI GTSAC 3 cut(s) 157, 683, 1703
TseI GCWGC 3 cut(s) 621, 764, 1090
Tsp45I GTSAC 3 cut(s) 157, 683, 1703
TspDTI ATGAA 9 cut(s) 96, 243, 519, 905, 933, 1131, 1224, 1370, 1408
TspRI CASTG 3 cut(s) 352, 359, 572
Van91I CCANNNNNTGG 1 cut(s) 170
VpaK11BI GGWCC 1 cut(s) 1321
XapI RAATTY 3 cut(s) 982, 1305, 1359
XceI RCATGY 1 cut(s) 117
XcmI CCANNNNNNNNNTGG 1 cut(s) 1734
XmiI GTMKAC 2 cut(s) 201, 811
XmnI GAANNNNTTC 3 cut(s) 49, 986, 1122
XspI CTAG 3 cut(s) 188, 548, 1302
Zsp2I ATGCAT 1 cut(s) 1534
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.