MD08G1182500.v1.1

Carbon catabolite repressor protein 4 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0001088
Physical Location & Seq
Reverse (-)
22639565 .. 22645477
5913 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1182500.v1.1.491

Sequence Viewer

Length: 1896 bp
ATGGCTCAAGAATCTGGGTCGTCTGAGTCCCCCAATTGGAGACTCATTCTGGATTTTCCTTCAAATGCTCCTGTGTTCGGCTGCAGATTCCAGCCCTACATTCGTGTGGTCACACCCAAAGGCTCTTTTCAATTCCCGCCTCACGAGAATTCTTGCACCTGGTACCGAGAGAATGTTTGCTCGTCTTCCAATCAAGAGAAGGTTCGCTGTTTTGTCCACCATGACAAGCTGTCCACAATTCAGTGTAGAGTTTGTGTAGGTCAAAATCGACATACCAAGATAAGTTACTATTGCTCTAACACTTGTTATATGGCTGCCTGGAACAAGCACAAGTTGCACCATCATTTTGCAGATCCTGATCCACAAGCAGTGAAAATCATCAAGAGTTTTGGGCCTTATGGCTCCTATCCTGATTTACCTGGCTATCCGGATGACGATTCACAACCTGATGAGGCGGTGGAACAAGATGGGAAAACATGGATTGAAATGGGACCTTGGGAATATTATGTACCCACGGAGCATGATATTGGATTTTGTCTGAGGCTAAAAGTTGAAGTTGTTGATTCTTCAACGCGTACACAATTGTGCCCAGCAAGAATCGAAGTGACAGATCCTGTGATTTATCCTCCTCCTCATCCACCGCGTTGTACAATGTGGAACTCTTGCATCGCTGACCTCAAAGAACACTCTTCTAACGATGTAACATTTAGGGTGCTGTCCTATAATATTCTCGCTGATTATCTTGCTACTAGTGGTAGTAACCGGCACGATTACTGCCCAGATTGGGCTCTTTCATGGGCATATCGTCAGCAAAATTTACTTTATGAGATCATTGACTATGACGCAGATATCTTATGTCTCCAAGAGGTAACTACTCTGTTCTTAAATGCATATGTTTTTACGAGATCATTGCCCAAGACCGTTTTATTTTTTATATTTTTCCTCATGTACGGGCAGGTACAGAAAGATCATTTTGAGAATTTCCTCAAACCTGAGTTGGCAAAATATGGATACTCGGTTGTATACAAGAAGAAAAAGACCGAGATATTTACGTTTAAGTCCCAGCTTACAGTTGATGGATGTGCTACATTTTACCGTGATCAACGCTTCAAAGAAATTGCAACATATGAGCTTGAGTTTAATAATTCAGCAAAGCCCTTTGTAGATTCATTGGATGGTGAACAGAAAAAAGAAGCTCTCCGTCTGTTGAAGGACAATGTTGCACTTGTTGTTATATTAGAAATGGTGGAAAATGAGGGCTCTTCTGATGGCAATCGACCTAGAATTTGTGTGGCAAATACCCATATACATGCAAATGTACAAAATCCAGACATTAAATTGTTCCAGGTTGTAACCCTCATCCATGCACTTGAGAAAATTGCCGAGTTGAAGATTCCCCTGCTGATTTGTGCAGATTTGAACTCTCTGCCTCAGAGTGATCCTTATATGTTCATAAGCAAGGCCAGAGTTGAGATTCTTCCCATCAAGGAAACTGATAAATCGGGCATATTGCAGACACTCAAGCTTTCTCATCCATTGAATCTGGTAAGTGCATATGCAACTTTTTTTCAGTCTGATGGGGTCGAGGATCACCAACGTGAGAAGATGGATCCTGAAACCAGGGAGCCTTTGTTCACCAGCCACACACCATCCTTCTTTGGAACTTTAGATTATATATTCTACACAGCTGCTAGCTTGAGGCTTGACAGCGTATTGGAGCTTCTTGACAAAGAAGGTTACCTTCCATCTGCTAAATGGTCATCAGACCATATTGCCCTCATGGCAAGTTTTTCTCTTGAGACAAGCACTTACAATCGGAGCTCAGAACCTCTTCCAGAGAGCCTAGGGCAGCACCCAACATTTTTGCACAACAATAAAGTTTTACAGGAAAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
Exo_endo_phos

Protein Analysis

632

Amino Acids

72.33

Weight (kDa)

5.66

Isoelectric Point (pI)

40.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo_endo_phos PF03372 239 - 590 6.4e-18 Endonuclease/Exonuclease/phosphatase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 946
Acc65I GGTACC 1 cut(s) 162
AccB1I GGYRCC 1 cut(s) 162
AccI GTMKAC 1 cut(s) 1023
AccII CGCG 2 cut(s) 574, 643
AccIII TCCGGA 1 cut(s) 427
AciI CCGC 3 cut(s) 137, 455, 641
AclWI GGATC 7 cut(s) 347, 353, 605, 1433, 1596, 1604, 1617
AcsI RAATTY 4 cut(s) 148, 814, 979, 1284
AfaI GTAC 7 cut(s) 164, 510, 577, 649, 950, 960, 1320
AfiI CCNNNNNNNGG 3 cut(s) 36, 77, 784
AflIII ACRYGT 1 cut(s) 572
AhdI GACNNNNNGTC 1 cut(s) 229
AhlI ACTAGT 1 cut(s) 749
AjnI CCWGG 5 cut(s) 158, 317, 418, 1344, 1619
AleI CACNNNNGTG 2 cut(s) 583, 1596
AloI GAACNNNNNNTCC 2 cut(s) 1616, 1648
Alw21I GWGCWC 1 cut(s) 1823
Alw26I GTCTC 3 cut(s) 34, 863, 1793
AlwI GGATC 7 cut(s) 347, 353, 605, 1433, 1596, 1604, 1617
AlwNI CAGNNNCTG 2 cut(s) 356, 614
Aor13HI TCCGGA 1 cut(s) 427
AoxI GGCC 2 cut(s) 392, 1461
ApeKI GCWGC 4 cut(s) 81, 314, 1688, 1849
ApoI RAATTY 4 cut(s) 148, 814, 979, 1284
ArsI GACNNNNNNTTYG 2 cut(s) 1269, 1301
Asp700I GAANNNNTTC 1 cut(s) 1830
Asp718I GGTACC 1 cut(s) 162
AspA2I CCTAGG 1 cut(s) 1843
AspS9I GGNCC 2 cut(s) 392, 491
AsuHPI GGTGA 3 cut(s) 1190, 1583, 1627
AsuNHI GCTAGC 1 cut(s) 1691
AvaII GGWCC 1 cut(s) 491
AvrII CCTAGG 1 cut(s) 1843
BaeGI GKGCMC 1 cut(s) 590
BamHI GGATCC 1 cut(s) 1609
BanI GGYRCC 1 cut(s) 162
BanII GRGCYC 3 cut(s) 790, 1262, 1823
BarI GAAGNNNNNNTAC 2 cut(s) 1704, 1736
BauI CACGAG 1 cut(s) 143
BbsI GAAGAC 1 cut(s) 177
Bbv12I GWGCWC 1 cut(s) 1823
BbvI GCAGC 4 cut(s) 68, 301, 1675, 1861
BcgI CGANNNNNNTGC 2 cut(s) 892, 926
BciT130I CCWGG 5 cut(s) 160, 319, 420, 1346, 1621
BciVI GTATCC 1 cut(s) 1004
BclI TGATCA 1 cut(s) 1099
BcoDI GTCTC 3 cut(s) 34, 863, 1793
BcuI ACTAGT 1 cut(s) 749
BfaI CTAG 4 cut(s) 750, 1281, 1692, 1844
BfmI CTRYAG 1 cut(s) 82
BfuAI ACCTGC 1 cut(s) 946
BfuI GTATCC 1 cut(s) 1004
BglI GCCNNNNNGGC 1 cut(s) 1781
BisI GCNGC 4 cut(s) 82, 315, 1689, 1850
BlnI CCTAGG 1 cut(s) 1843
BlsI GCNGC 4 cut(s) 83, 316, 1690, 1851
Bme1390I CCNGG 5 cut(s) 160, 319, 420, 1346, 1621
Bme18I GGWCC 1 cut(s) 491
BmeRI GACNNNNNGTC 1 cut(s) 229
BmgT120I GGNCC 2 cut(s) 392, 491
BmiI GGNNCC 5 cut(s) 164, 403, 492, 1611, 1626
BmrFI CCNGG 5 cut(s) 160, 319, 420, 1346, 1621
BmsI GCATC 1 cut(s) 675
BmtI GCTAGC 1 cut(s) 1695
BpiI GAAGAC 1 cut(s) 177
BpuEI CTTGAG 5 cut(s) 1154, 1391, 1505, 1717, 1817
BsaBI GATNNNNATC 2 cut(s) 357, 1272
BsaJI CCNNGG 4 cut(s) 494, 513, 1620, 1843
BsaWI WCCGGW 1 cut(s) 427
BsaXI ACNNNNNCTCC 2 cut(s) 1616, 1646
Bsc4I CCNNNNNNNGG 3 cut(s) 36, 77, 784
Bse118I RCCGGY 1 cut(s) 762
Bse3DI GCAATG 1 cut(s) 908
Bse8I GATNNNNATC 2 cut(s) 357, 1272
BseAI TCCGGA 1 cut(s) 427
BseBI CCWGG 5 cut(s) 160, 319, 420, 1346, 1621
BseDI CCNNGG 4 cut(s) 494, 513, 1620, 1843
BseGI GGATG 7 cut(s) 436, 634, 1085, 1180, 1359, 1531, 1649
BseJI GATNNNNATC 2 cut(s) 357, 1272
BseLI CCNNNNNNNGG 3 cut(s) 36, 77, 784
BseMI GCAATG 1 cut(s) 908
BseMII CTCAG 5 cut(s) 15, 530, 984, 1445, 1836
BseRI GAGGAG 2 cut(s) 618, 621
BseSI GKGCMC 1 cut(s) 590
BseXI GCAGC 4 cut(s) 68, 301, 1675, 1861
BseYI CCCAGC 2 cut(s) 589, 1062
BsgI GTGCAG 1 cut(s) 1431
Bsh1236I CGCG 2 cut(s) 574, 643
BshFI GGCC 2 cut(s) 394, 1463
BshNI GGYRCC 1 cut(s) 162
BsiHKAI GWGCWC 1 cut(s) 1823
BsiSI CCGG 2 cut(s) 428, 763
BslFI GGGAC 3 cut(s) 13, 504, 1045
BslI CCNNNNNNNGG 3 cut(s) 36, 77, 784
BsmAI GTCTC 3 cut(s) 34, 863, 1793
BsmFI GGGAC 3 cut(s) 13, 504, 1045
BsnI GGCC 2 cut(s) 394, 1463
Bsp1286I GDGCHC 4 cut(s) 590, 790, 1262, 1823
Bsp13I TCCGGA 1 cut(s) 427
Bsp1407I TGTACA 2 cut(s) 647, 1318
BspACI CCGC 3 cut(s) 137, 455, 641
BspANI GGCC 2 cut(s) 394, 1463
BspCNI CTCAG 5 cut(s) 16, 531, 985, 1444, 1835
BspEI TCCGGA 1 cut(s) 427
BspFNI CGCG 2 cut(s) 574, 643
BspLI GGNNCC 5 cut(s) 164, 403, 492, 1611, 1626
BspMAI CTGCAG 1 cut(s) 86
BspMI ACCTGC 1 cut(s) 946
BspOI GCTAGC 1 cut(s) 1695
BspPI GGATC 7 cut(s) 347, 353, 605, 1433, 1596, 1604, 1617
BspQI GCTCTTC 1 cut(s) 1267
BspT107I GGYRCC 1 cut(s) 162
BsrDI GCAATG 1 cut(s) 908
BsrFI RCCGGY 1 cut(s) 762
BsrGI TGTACA 2 cut(s) 647, 1318
BssAI RCCGGY 1 cut(s) 762
BssECI CCNNGG 4 cut(s) 494, 513, 1620, 1843
BssNAI GTATAC 1 cut(s) 1024
BssSI CACGAG 1 cut(s) 143
BssT1I CCWWGG 2 cut(s) 494, 1843
Bst1107I GTATAC 1 cut(s) 1024
Bst2BI CACGAG 1 cut(s) 143
Bst2UI CCWGG 5 cut(s) 160, 319, 420, 1346, 1621
Bst4CI ACNGT 3 cut(s) 922, 1072, 1097
Bst6I CTCTTC 3 cut(s) 694, 1267, 1836
BstAPI GCANNNNNTGC 1 cut(s) 334
BstAUI TGTACA 2 cut(s) 647, 1318
BstC8I GCNNGC 1 cut(s) 1693
BstDEI CTNAG 5 cut(s) 24, 539, 993, 1431, 1822
BstDSI CCRYGG 1 cut(s) 513
BstEII GGTNACC 1 cut(s) 1736
BstF5I GGATG 7 cut(s) 436, 634, 1085, 1180, 1359, 1531, 1649
BstFNI CGCG 2 cut(s) 574, 643
BstMAI GTCTC 3 cut(s) 34, 863, 1793
BstMWI GCNNNNNNNGC 2 cut(s) 334, 1781
BstNI CCWGG 5 cut(s) 160, 319, 420, 1346, 1621
BstNSI RCATGY 1 cut(s) 1313
BstPI GGTNACC 1 cut(s) 1736
BstSCI CCNGG 5 cut(s) 158, 317, 418, 1344, 1619
BstSFI CTRYAG 1 cut(s) 82
BstSLI GKGCMC 1 cut(s) 590
BstUI CGCG 2 cut(s) 574, 643
BstV1I GCAGC 4 cut(s) 68, 301, 1675, 1861
BstV2I GAAGAC 1 cut(s) 177
BstX2I RGATCY 3 cut(s) 352, 610, 1609
BstYI RGATCY 3 cut(s) 352, 610, 1609
BstZ17I GTATAC 1 cut(s) 1024
BsuI GTATCC 1 cut(s) 1004
BsuRI GGCC 2 cut(s) 394, 1463
BtgI CCRYGG 1 cut(s) 513
BtgZI GCGATG 1 cut(s) 652
BtsCI GGATG 7 cut(s) 436, 634, 1085, 1180, 1359, 1531, 1649
BtsI GCAGTG 1 cut(s) 375
BtsIMutI CAGTG 2 cut(s) 248, 375
BveI ACCTGC 1 cut(s) 946
Cac8I GCNNGC 1 cut(s) 1693
CaiI CAGNNNCTG 2 cut(s) 356, 614
Cfr10I RCCGGY 1 cut(s) 762
Cfr13I GGNCC 2 cut(s) 392, 491
CseI GACGC 1 cut(s) 851
CsiI ACCWGGT 1 cut(s) 158
Csp6I GTAC 7 cut(s) 163, 509, 576, 648, 949, 959, 1319
CviAII CATG 8 cut(s) 221, 477, 521, 795, 946, 1310, 1364, 1780
CviQI GTAC 7 cut(s) 163, 509, 576, 648, 949, 959, 1319
DdeI CTNAG 5 cut(s) 24, 539, 993, 1431, 1822
DriI GACNNNNNGTC 1 cut(s) 229
Eam1104I CTCTTC 3 cut(s) 694, 1267, 1836
Eam1105I GACNNNNNGTC 1 cut(s) 229
EarI CTCTTC 3 cut(s) 694, 1267, 1836
Ecl136II GAGCTC 1 cut(s) 1821
Eco130I CCWWGG 2 cut(s) 494, 1843
Eco24I GRGCYC 3 cut(s) 790, 1262, 1823
Eco32I GATATC 1 cut(s) 850
Eco47I GGWCC 1 cut(s) 491
Eco53kI GAGCTC 1 cut(s) 1821
Eco91I GGTNACC 1 cut(s) 1736
EcoICRI GAGCTC 1 cut(s) 1821
EcoO109I RGGNCCY 1 cut(s) 491
EcoO65I GGTNACC 1 cut(s) 1736
EcoRI GAATTC 1 cut(s) 148
EcoRII CCWGG 5 cut(s) 158, 317, 418, 1344, 1619
EcoRV GATATC 1 cut(s) 850
EcoT14I CCWWGG 2 cut(s) 494, 1843
EcoT22I ATGCAT 1 cut(s) 892
EcoT38I GRGCYC 3 cut(s) 790, 1262, 1823
ErhI CCWWGG 2 cut(s) 494, 1843
FaeI CATG 8 cut(s) 224, 480, 524, 798, 949, 1313, 1367, 1783
FalI AAGNNNNNCTT 2 cut(s) 1725, 1757
FaqI GGGAC 3 cut(s) 13, 504, 1045
FatI CATG 8 cut(s) 220, 476, 520, 794, 945, 1309, 1363, 1779
FauI CCCGC 1 cut(s) 144
FauNDI CATATG 3 cut(s) 892, 1126, 1555
FbaI TGATCA 1 cut(s) 1099
FblI GTMKAC 1 cut(s) 1023
Fnu4HI GCNGC 4 cut(s) 82, 315, 1689, 1850
FokI GGATG 7 cut(s) 443, 621, 1092, 1187, 1346, 1518, 1636
FriOI GRGCYC 3 cut(s) 790, 1262, 1823
Fsp4HI GCNGC 4 cut(s) 82, 315, 1689, 1850
FspBI CTAG 4 cut(s) 750, 1281, 1692, 1844
GluI GCNGC 4 cut(s) 82, 315, 1689, 1850
GsaI CCCAGC 2 cut(s) 593, 1066
HaeIII GGCC 2 cut(s) 394, 1463
HapII CCGG 2 cut(s) 428, 763
HgaI GACGC 1 cut(s) 851
Hin1II CATG 8 cut(s) 224, 480, 524, 798, 949, 1313, 1367, 1783
HindIII AAGCTT 1 cut(s) 1523
HpaII CCGG 2 cut(s) 428, 763
HphI GGTGA 3 cut(s) 1190, 1583, 1627
Hpy166II GTNNAC 6 cut(s) 217, 234, 578, 1024, 1181, 1635
Hpy188I TCNGA 8 cut(s) 25, 540, 1267, 1434, 1576, 1765, 1818, 1825
Hpy8I GTNNAC 6 cut(s) 217, 234, 578, 1024, 1181, 1635
HpyAV CCTTC 6 cut(s) 69, 193, 1204, 1663, 1727, 1751
HpyCH4III ACNGT 3 cut(s) 922, 1072, 1097
HpyCH4IV ACGT 2 cut(s) 1052, 1597
HpyF10VI GCNNNNNNNGC 2 cut(s) 334, 1781
HpyF3I CTNAG 5 cut(s) 24, 539, 993, 1431, 1822
HpySE526I ACGT 2 cut(s) 1052, 1597
Hsp92II CATG 8 cut(s) 224, 480, 524, 798, 949, 1313, 1367, 1783
Kpn2I TCCGGA 1 cut(s) 427
KpnI GGTACC 1 cut(s) 166
Ksp22I TGATCA 1 cut(s) 1099
LguI GCTCTTC 1 cut(s) 1267
LmnI GCTCC 6 cut(s) 73, 407, 517, 1624, 1717, 1818
Lsp1109I GCAGC 4 cut(s) 68, 301, 1675, 1861
LweI GCATC 1 cut(s) 675
MabI ACCWGGT 1 cut(s) 158
MaeI CTAG 4 cut(s) 750, 1281, 1692, 1844
MaeII ACGT 2 cut(s) 1052, 1597
MaeIII GTNAC 8 cut(s) 109, 284, 604, 700, 758, 868, 1351, 1736
MboII GAAGA 9 cut(s) 177, 558, 681, 1042, 1254, 1402, 1469, 1615, 1823
MfeI CAATTG 2 cut(s) 34, 581
MflI RGATCY 3 cut(s) 352, 610, 1609
MhlI GDGCHC 4 cut(s) 590, 790, 1262, 1823
MluI ACGCGT 1 cut(s) 572
MlyI GAGTC 2 cut(s) 35, 36
Mph1103I ATGCAT 1 cut(s) 892
MroI TCCGGA 1 cut(s) 427
MroXI GAANNNNTTC 1 cut(s) 1830
MseI TTAA 4 cut(s) 884, 1056, 1140, 1335
MslI CAYNNNNRTG 5 cut(s) 104, 583, 1308, 1314, 1596
MspA1I CMGCKG 1 cut(s) 1688
MspI CCGG 2 cut(s) 428, 763
MspR9I CCNGG 5 cut(s) 160, 319, 420, 1346, 1621
MunI CAATTG 2 cut(s) 34, 581
MvaI CCWGG 5 cut(s) 160, 319, 420, 1346, 1621
MvnI CGCG 2 cut(s) 574, 643
MwoI GCNNNNNNNGC 2 cut(s) 334, 1781
NdeI CATATG 3 cut(s) 892, 1126, 1555
NheI GCTAGC 1 cut(s) 1691
NlaIII CATG 8 cut(s) 224, 480, 524, 798, 949, 1313, 1367, 1783
NlaIV GGNNCC 5 cut(s) 164, 403, 492, 1611, 1626
NmeAIII GCCGAG 1 cut(s) 1408
NmuCI GTSAC 2 cut(s) 109, 604
NsiI ATGCAT 1 cut(s) 892
NspI RCATGY 1 cut(s) 1313
OliI CACNNNNGTG 2 cut(s) 583, 1596
PciSI GCTCTTC 1 cut(s) 1267
PdmI GAANNNNTTC 1 cut(s) 1830
PfeI GAWTC 9 cut(s) 11, 87, 437, 563, 597, 1166, 1393, 1474, 1540
PkrI GCNGC 4 cut(s) 83, 316, 1690, 1851
PleI GAGTC 2 cut(s) 34, 36
PpsI GAGTC 2 cut(s) 34, 36
PpuMI RGGWCCY 1 cut(s) 491
Psp124BI GAGCTC 1 cut(s) 1823
Psp5II RGGWCCY 1 cut(s) 491
Psp6I CCWGG 5 cut(s) 158, 317, 418, 1344, 1619
PspEI GGTNACC 1 cut(s) 1736
PspFI CCCAGC 2 cut(s) 589, 1062
PspGI CCWGG 5 cut(s) 158, 317, 418, 1344, 1619
PspN4I GGNNCC 5 cut(s) 164, 403, 492, 1611, 1626
PspPI GGNCC 2 cut(s) 392, 491
PspPPI RGGWCCY 1 cut(s) 491
PstI CTGCAG 1 cut(s) 86
PstNI CAGNNNCTG 2 cut(s) 356, 614
PsuI RGATCY 3 cut(s) 352, 610, 1609
PvuII CAGCTG 1 cut(s) 1688
RsaI GTAC 7 cut(s) 164, 510, 577, 649, 950, 960, 1320
RsaNI GTAC 7 cut(s) 163, 509, 576, 648, 949, 959, 1319
RseI CAYNNNNRTG 5 cut(s) 104, 583, 1308, 1314, 1596
SacI GAGCTC 1 cut(s) 1823
SapI GCTCTTC 1 cut(s) 1267
SaqAI TTAA 4 cut(s) 884, 1056, 1140, 1335
SatI GCNGC 4 cut(s) 82, 315, 1689, 1850
Sau96I GGNCC 2 cut(s) 392, 491
SchI GAGTC 2 cut(s) 35, 36
ScrFI CCNGG 5 cut(s) 160, 319, 420, 1346, 1621
SduI GDGCHC 4 cut(s) 590, 790, 1262, 1823
SexAI ACCWGGT 1 cut(s) 158
SfaNI GCATC 1 cut(s) 675
SfcI CTRYAG 1 cut(s) 82
SinI GGWCC 1 cut(s) 491
SmiMI CAYNNNNRTG 5 cut(s) 104, 583, 1308, 1314, 1596
SmlI CTYRAG 6 cut(s) 6, 1133, 1370, 1520, 1696, 1796
SmoI CTYRAG 6 cut(s) 6, 1133, 1370, 1520, 1696, 1796
SpeI ACTAGT 1 cut(s) 749
SsiI CCGC 3 cut(s) 137, 455, 641
SspI AATATT 2 cut(s) 503, 727
SspMI CTAG 4 cut(s) 750, 1281, 1692, 1844
SstI GAGCTC 1 cut(s) 1823
StyD4I CCNGG 5 cut(s) 158, 317, 418, 1344, 1619
StyI CCWWGG 2 cut(s) 494, 1843
TaaI ACNGT 3 cut(s) 922, 1072, 1097
TaiI ACGT 2 cut(s) 1055, 1600
TaqI TCGA 4 cut(s) 268, 600, 1276, 1584
TaqII GACCGA 1 cut(s) 1055
TatI WGTACW 2 cut(s) 647, 1318
TfiI GAWTC 9 cut(s) 11, 87, 437, 563, 597, 1166, 1393, 1474, 1540
Tru1I TTAA 4 cut(s) 884, 1056, 1140, 1335
Tru9I TTAA 4 cut(s) 884, 1056, 1140, 1335
TscAI CASTG 2 cut(s) 248, 375
TseFI GTSAC 2 cut(s) 109, 604
TseI GCWGC 4 cut(s) 81, 314, 1688, 1849
Tsp45I GTSAC 2 cut(s) 109, 604
TspDTI ATGAA 3 cut(s) 783, 1158, 1441
TspGWI ACGGA 2 cut(s) 530, 1190
TspRI CASTG 2 cut(s) 248, 375
VpaK11BI GGWCC 1 cut(s) 491
XapI RAATTY 4 cut(s) 148, 814, 979, 1284
XceI RCATGY 1 cut(s) 1313
XcmI CCANNNNNNNNNTGG 1 cut(s) 1752
XmaJI CCTAGG 1 cut(s) 1843
XmiI GTMKAC 1 cut(s) 1023
XmnI GAANNNNTTC 1 cut(s) 1830
XspI CTAG 4 cut(s) 750, 1281, 1692, 1844
Zsp2I ATGCAT 1 cut(s) 892
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.