pycom14g07780

phosphatidylinositol 4-phosphate 5-kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Reverse (-)
8062601 .. 8065082
2482 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g07780.1

Sequence Viewer

Length: 1371 bp
ATGGTAGCACCCATGGCGGTGAATCACCATGTAATGCCGGTGATCGATAGGGCTTCTACTGTCGGGGGAGAACTGGATGAAGATATGATGGGTCTGCATGTTGAAGATGGGAATCAAAGGGGACTCCCAATGAAGGTACCTAAGACTGCAAGGAGGCAGGGGGAAACAATCAGCAGGGGCCACAAAAACTATGAACTCATGCTCAATTTGCAGCTAGGAATCAGGCATTCTGTTGGCAGACCAGGTCCATCTGGATCCCTTGATCTGAAGCCTTCGGCTTTCGACCCCAGGGAAAAATATTGGACTAGATTTCCTTCAGAAGGCTCCAAATACACTCCGCCACACCAGTCCTGTGAATTTAAATGGAAGGATTACTGTCCATTAGTCTTCAGGACCCTTAGAAAGTTGTTCAAGGTCGATCAAGCAGACTACATGTTATCCATTTGCGGGAATGATGCGCTTCGGGAACTCTCCTCTCCTGGTAAAAGTGGCAGCTTCTTTTACTTGACCAATGACGACCGCTACATGATTAAAACAATGAAGAAGGCAGAAGTTAAAGTGCTTATAAGGATGCTTTCAGCCTACTACAACCATGTTCGAGCATACGAAAACACTCTGGTCACTAAATTTTATGGTCTACATTGTGTAAAGCTAATGGGCCAACCTATTCAAAAGAAGGTGCGGTTCATCATCATGGGGAACCTTTTCTGTTCTGAATATACAATTCACAGACGTTTCGACTTGAAGGGATCTTCCCTCGGTCGAACAACAGATAAGCCTGAGACAGAGATTGATGAAATGACTATTCTTAAAGATCTTGATCTTAACTTTATATTTCGACTTCAGAAGACATGGTTTCAAGATTTTTGCAGGCAAATTGATAGGGATTGTGAGTTTCTTGAACAGGAGAGAATAATGGATTATAGCCTGTTGGTTGGACTGCATTTCAGAAATATATCAGCTGCTGGGGATCTTATTCCTTCTGGAGCACGCACTCCTACTGGTGACCAAGAGAGCGAGGGAGCTCCCCGTCTTTCTCGAGCAGACATGGATCAACTTCTTTTAGATCCATCCAGGTGGGCTAGTATTAAATTGGGTTTGAACATGCCAGCAAGAGTTGAAAAGACGGAGAGAAAAACTGATTGTGAATTTCAACTTGTGGTAGATCCAACTGGGGAGTATTATGATGTTATAATGTTCTTTGGAATCATAGACATTCTTCAAGACTACGACATAAGCAAGAAGCTTGAGCATGCCTACAAGTCCATCCAGTACGACGCAACTTCTATATCCGCTGTTGATCGATCGAGGCAATATTCGAGGCGCTTTCGTGATTTCATTTACAAAGTTTTTGCAGAAGAAACCACTTGA

Protein Analysis

457

Amino Acids

52.71

Weight (kDa)

8.26

Isoelectric Point (pI)

36.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PIP5K PF01504 148 - 449 1.3e-99 Phosphatidylinositol-4-phosphate 5-Kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 566, 1193
Acc65I GGTACC 1 cut(s) 136
AccB1I GGYRCC 1 cut(s) 136
AccI GTMKAC 1 cut(s) 637
AciI CCGC 6 cut(s) 17, 338, 447, 520, 682, 1293
AclWI GGATC 7 cut(s) 249, 262, 757, 978, 1059, 1061, 1160
AcsI RAATTY 3 cut(s) 356, 626, 1148
AcuI CTGAAG 4 cut(s) 287, 300, 373, 827
AfaI GTAC 2 cut(s) 138, 1274
AfiI CCNNNNNNNGG 3 cut(s) 133, 320, 447
AflIII ACRYGT 1 cut(s) 432
AjnI CCWGG 4 cut(s) 241, 287, 478, 1073
AluBI AGCT 6 cut(s) 214, 495, 652, 962, 1025, 1246
AluI AGCT 6 cut(s) 214, 495, 652, 962, 1025, 1246
Alw21I GWGCWC 2 cut(s) 991, 1027
Alw26I GTCTC 1 cut(s) 776
AlwI GGATC 7 cut(s) 249, 262, 757, 978, 1059, 1061, 1160
AlwNI CAGNNNCTG 1 cut(s) 965
Ama87I CYCGRG 1 cut(s) 1038
AoxI GGCC 2 cut(s) 178, 658
ApeKI GCWGC 3 cut(s) 211, 492, 962
ApoI RAATTY 3 cut(s) 356, 626, 1148
Asp700I GAANNNNTTC 1 cut(s) 704
Asp718I GGTACC 1 cut(s) 136
AspLEI GCGC 2 cut(s) 460, 1326
AspS9I GGNCC 4 cut(s) 178, 245, 393, 658
AsuHPI GGTGA 4 cut(s) 17, 31, 52, 1016
AvaI CYCGRG 1 cut(s) 1038
AvaII GGWCC 2 cut(s) 245, 393
BamHI GGATCC 1 cut(s) 254
BanI GGYRCC 1 cut(s) 136
BanII GRGCYC 1 cut(s) 1027
BbsI GAAGAC 2 cut(s) 379, 854
Bbv12I GWGCWC 2 cut(s) 991, 1027
BbvI GCAGC 3 cut(s) 223, 504, 949
BccI CCATC 5 cut(s) 82, 101, 256, 1078, 1274
BciT130I CCWGG 4 cut(s) 243, 289, 480, 1075
BcoDI GTCTC 1 cut(s) 776
BfaI CTAG 3 cut(s) 215, 306, 1083
BfoI RGCGCY 1 cut(s) 1327
BglII AGATCT 1 cut(s) 814
BisI GCNGC 3 cut(s) 212, 493, 963
BlsI GCNGC 3 cut(s) 213, 494, 964
Bme1390I CCNGG 4 cut(s) 243, 289, 480, 1075
Bme18I GGWCC 2 cut(s) 245, 393
BmeT110I CYCGRG 1 cut(s) 1038
BmgT120I GGNCC 4 cut(s) 178, 245, 393, 658
BmiI GGNNCC 6 cut(s) 138, 179, 256, 325, 395, 701
BmrFI CCNGG 4 cut(s) 243, 289, 480, 1075
BmrI ACTGGG 1 cut(s) 1182
BmsI GCATC 2 cut(s) 445, 561
BmuI ACTGGG 1 cut(s) 1182
BpiI GAAGAC 2 cut(s) 379, 854
BpmI CTGGAG 1 cut(s) 1005
BpuEI CTTGAG 1 cut(s) 1268
Bsa29I ATCGAT 2 cut(s) 45, 1303
BsaBI GATNNNNATC 2 cut(s) 111, 819
BsaJI CCNNGG 4 cut(s) 12, 287, 288, 757
Bsc4I CCNNNNNNNGG 3 cut(s) 133, 320, 447
Bse118I RCCGGY 1 cut(s) 37
Bse1I ACTGG 5 cut(s) 78, 346, 1006, 1177, 1270
Bse8I GATNNNNATC 2 cut(s) 111, 819
BseBI CCWGG 4 cut(s) 243, 289, 480, 1075
BseCI ATCGAT 2 cut(s) 45, 1303
BseDI CCNNGG 4 cut(s) 12, 287, 288, 757
BseGI GGATG 4 cut(s) 82, 576, 1070, 1266
BseJI GATNNNNATC 2 cut(s) 111, 819
BseLI CCNNNNNNNGG 3 cut(s) 133, 320, 447
BseMII CTCAG 1 cut(s) 771
BseNI ACTGG 5 cut(s) 78, 346, 1006, 1177, 1270
BseRI GAGGAG 1 cut(s) 463
BseXI GCAGC 3 cut(s) 223, 504, 949
BseYI CCCAGC 1 cut(s) 965
Bsh1285I CGRYCG 3 cut(s) 520, 763, 1307
BshFI GGCC 2 cut(s) 180, 660
BshNI GGYRCC 1 cut(s) 136
BshVI ATCGAT 2 cut(s) 45, 1303
BsiEI CGRYCG 3 cut(s) 520, 763, 1307
BsiHKAI GWGCWC 2 cut(s) 991, 1027
BsiHKCI CYCGRG 1 cut(s) 1038
BsiSI CCGG 1 cut(s) 38
BslFI GGGAC 1 cut(s) 135
BslI CCNNNNNNNGG 3 cut(s) 133, 320, 447
BsmAI GTCTC 1 cut(s) 776
BsmFI GGGAC 1 cut(s) 135
BsmI GAATGC 1 cut(s) 226
BsnI GGCC 2 cut(s) 180, 660
BsoBI CYCGRG 1 cut(s) 1038
Bsp1286I GDGCHC 2 cut(s) 991, 1027
Bsp19I CCATGG 1 cut(s) 12
BspACI CCGC 6 cut(s) 17, 338, 447, 520, 682, 1293
BspANI GGCC 2 cut(s) 180, 660
BspCNI CTCAG 1 cut(s) 772
BspDI ATCGAT 2 cut(s) 45, 1303
BspLI GGNNCC 6 cut(s) 138, 179, 256, 325, 395, 701
BspPI GGATC 7 cut(s) 249, 262, 757, 978, 1059, 1061, 1160
BspT107I GGYRCC 1 cut(s) 136
BsrFI RCCGGY 1 cut(s) 37
BsrI ACTGG 5 cut(s) 78, 346, 1006, 1177, 1270
BssAI RCCGGY 1 cut(s) 37
BssECI CCNNGG 4 cut(s) 12, 287, 288, 757
BssT1I CCWWGG 1 cut(s) 12
Bst2UI CCWGG 4 cut(s) 243, 289, 480, 1075
Bst4CI ACNGT 2 cut(s) 61, 377
BstC8I GCNNGC 4 cut(s) 872, 991, 1110, 1254
BstDEI CTNAG 3 cut(s) 141, 398, 780
BstDSI CCRYGG 1 cut(s) 12
BstEII GGTNACC 1 cut(s) 1004
BstENI CCTNNNNNAGG 1 cut(s) 318
BstF5I GGATG 4 cut(s) 82, 576, 1070, 1266
BstH2I RGCGCY 1 cut(s) 1327
BstHHI GCGC 2 cut(s) 460, 1326
BstMAI GTCTC 1 cut(s) 776
BstMCI CGRYCG 3 cut(s) 520, 763, 1307
BstMWI GCNNNNNNNGC 2 cut(s) 14, 208
BstNI CCWGG 4 cut(s) 243, 289, 480, 1075
BstNSI RCATGY 4 cut(s) 101, 436, 1108, 1256
BstPI GGTNACC 1 cut(s) 1004
BstSCI CCNGG 4 cut(s) 241, 287, 478, 1073
BstV1I GCAGC 3 cut(s) 223, 504, 949
BstV2I GAAGAC 2 cut(s) 379, 854
BstX2I RGATCY 6 cut(s) 254, 749, 814, 970, 1066, 1165
BstXI CCANNNNNNTGG 1 cut(s) 1077
BstYI RGATCY 6 cut(s) 254, 749, 814, 970, 1066, 1165
Bsu15I ATCGAT 2 cut(s) 45, 1303
BsuRI GGCC 2 cut(s) 180, 660
BsuTUI ATCGAT 2 cut(s) 45, 1303
BtgI CCRYGG 1 cut(s) 12
BtsCI GGATG 4 cut(s) 82, 576, 1070, 1266
Cac8I GCNNGC 4 cut(s) 872, 991, 1110, 1254
CaiI CAGNNNCTG 1 cut(s) 965
CfoI GCGC 2 cut(s) 460, 1326
Cfr10I RCCGGY 1 cut(s) 37
Cfr13I GGNCC 4 cut(s) 178, 245, 393, 658
ClaI ATCGAT 2 cut(s) 45, 1303
CseI GACGC 1 cut(s) 1286
CsiI ACCWGGT 1 cut(s) 241
Csp6I GTAC 2 cut(s) 137, 1273
CviQI GTAC 2 cut(s) 137, 1273
DdeI CTNAG 3 cut(s) 141, 398, 780
DraI TTTAAA 1 cut(s) 361
EciI GGCGGA 1 cut(s) 327
Ecl136II GAGCTC 1 cut(s) 1025
Eco130I CCWWGG 1 cut(s) 12
Eco24I GRGCYC 1 cut(s) 1027
Eco47I GGWCC 2 cut(s) 245, 393
Eco53kI GAGCTC 1 cut(s) 1025
Eco57I CTGAAG 4 cut(s) 287, 300, 373, 827
Eco88I CYCGRG 1 cut(s) 1038
Eco91I GGTNACC 1 cut(s) 1004
EcoICRI GAGCTC 1 cut(s) 1025
EcoNI CCTNNNNNAGG 1 cut(s) 318
EcoO109I RGGNCCY 1 cut(s) 393
EcoO65I GGTNACC 1 cut(s) 1004
EcoRII CCWGG 4 cut(s) 241, 287, 478, 1073
EcoT14I CCWWGG 1 cut(s) 12
EcoT38I GRGCYC 1 cut(s) 1027
ErhI CCWWGG 1 cut(s) 12
FaqI GGGAC 1 cut(s) 135
FauI CCCGC 1 cut(s) 440
FblI GTMKAC 1 cut(s) 637
Fnu4HI GCNGC 3 cut(s) 212, 493, 963
FokI GGATG 4 cut(s) 89, 583, 1057, 1253
FriOI GRGCYC 1 cut(s) 1027
Fsp4HI GCNGC 3 cut(s) 212, 493, 963
FspBI CTAG 3 cut(s) 215, 306, 1083
GlaI GCGC 2 cut(s) 459, 1325
GluI GCNGC 3 cut(s) 212, 493, 963
GsaI CCCAGC 1 cut(s) 969
GsuI CTGGAG 1 cut(s) 1005
HaeII RGCGCY 1 cut(s) 1327
HaeIII GGCC 2 cut(s) 180, 660
HapII CCGG 1 cut(s) 38
HgaI GACGC 1 cut(s) 1286
HhaI GCGC 2 cut(s) 460, 1326
Hin6I GCGC 2 cut(s) 458, 1324
HinP1I GCGC 2 cut(s) 458, 1324
HindIII AAGCTT 1 cut(s) 1244
HinfI GANTC 5 cut(s) 22, 112, 123, 219, 1206
HpaII CCGG 1 cut(s) 38
HphI GGTGA 4 cut(s) 17, 31, 52, 1016
Hpy166II GTNNAC 1 cut(s) 638
Hpy188I TCNGA 5 cut(s) 267, 319, 715, 846, 950
Hpy8I GTNNAC 1 cut(s) 638
Hpy99I CGWCG 1 cut(s) 1280
HpyAV CCTTC 9 cut(s) 127, 282, 314, 324, 361, 538, 670, 739, 990
HpyCH4III ACNGT 2 cut(s) 61, 377
HpyCH4IV ACGT 1 cut(s) 733
HpyCH4V TGCA 6 cut(s) 97, 149, 211, 870, 943, 1355
HpyF10VI GCNNNNNNNGC 2 cut(s) 14, 208
HpyF3I CTNAG 3 cut(s) 141, 398, 780
HpySE526I ACGT 1 cut(s) 733
HspAI GCGC 2 cut(s) 458, 1324
KpnI GGTACC 1 cut(s) 140
LmnI GCTCC 4 cut(s) 329, 986, 1022, 1030
Lsp1109I GCAGC 3 cut(s) 223, 504, 949
LweI GCATC 2 cut(s) 445, 561
MabI ACCWGGT 1 cut(s) 241
MaeI CTAG 3 cut(s) 215, 306, 1083
MaeII ACGT 1 cut(s) 733
MaeIII GTNAC 2 cut(s) 619, 1004
MboII GAAGA 8 cut(s) 92, 116, 379, 553, 744, 859, 1211, 1370
MflI RGATCY 6 cut(s) 254, 749, 814, 970, 1066, 1165
MhlI GDGCHC 2 cut(s) 991, 1027
MluCI AATT 7 cut(s) 205, 356, 626, 723, 876, 1091, 1148
MlyI GAGTC 1 cut(s) 117
MmeI TCCRAC 2 cut(s) 916, 1193
MnlI CCTC 6 cut(s) 147, 484, 767, 1012, 1302, 1314
MroXI GAANNNNTTC 1 cut(s) 704
MseI TTAA 6 cut(s) 360, 531, 555, 810, 825, 1089
MslI CAYNNNNRTG 3 cut(s) 17, 692, 1075
MspA1I CMGCKG 2 cut(s) 962, 1295
MspI CCGG 1 cut(s) 38
MspR9I CCNGG 4 cut(s) 243, 289, 480, 1075
Mva1269I GAATGC 1 cut(s) 226
MvaI CCWGG 4 cut(s) 243, 289, 480, 1075
MwoI GCNNNNNNNGC 2 cut(s) 14, 208
NcoI CCATGG 1 cut(s) 12
NlaIV GGNNCC 6 cut(s) 138, 179, 256, 325, 395, 701
NmuCI GTSAC 2 cut(s) 619, 1004
NspI RCATGY 4 cut(s) 101, 436, 1108, 1256
PaeI GCATGC 1 cut(s) 1256
PaeR7I CTCGAG 1 cut(s) 1038
PasI CCCWGGG 1 cut(s) 288
PciI ACATGT 1 cut(s) 432
PctI GAATGC 1 cut(s) 226
PdmI GAANNNNTTC 1 cut(s) 704
PfeI GAWTC 4 cut(s) 22, 112, 219, 1206
PflFI GACNNNGTC 1 cut(s) 243
PkrI GCNGC 3 cut(s) 213, 494, 964
Ple19I CGATCG 1 cut(s) 1307
PleI GAGTC 1 cut(s) 117
PpsI GAGTC 1 cut(s) 117
PpuMI RGGWCCY 1 cut(s) 393
PscI ACATGT 1 cut(s) 432
PsiI TTATAA 2 cut(s) 566, 1193
Psp124BI GAGCTC 1 cut(s) 1027
Psp5II RGGWCCY 1 cut(s) 393
Psp6I CCWGG 4 cut(s) 241, 287, 478, 1073
PspEI GGTNACC 1 cut(s) 1004
PspFI CCCAGC 1 cut(s) 965
PspGI CCWGG 4 cut(s) 241, 287, 478, 1073
PspN4I GGNNCC 6 cut(s) 138, 179, 256, 325, 395, 701
PspPI GGNCC 4 cut(s) 178, 245, 393, 658
PspPPI RGGWCCY 1 cut(s) 393
PstNI CAGNNNCTG 1 cut(s) 965
PsuI RGATCY 6 cut(s) 254, 749, 814, 970, 1066, 1165
PsyI GACNNNGTC 1 cut(s) 243
PvuI CGATCG 1 cut(s) 1307
PvuII CAGCTG 1 cut(s) 962
RsaI GTAC 2 cut(s) 138, 1274
RsaNI GTAC 2 cut(s) 137, 1273
RseI CAYNNNNRTG 3 cut(s) 17, 692, 1075
SacI GAGCTC 1 cut(s) 1027
SaqAI TTAA 6 cut(s) 360, 531, 555, 810, 825, 1089
SatI GCNGC 3 cut(s) 212, 493, 963
Sau96I GGNCC 4 cut(s) 178, 245, 393, 658
SchI GAGTC 1 cut(s) 117
ScrFI CCNGG 4 cut(s) 243, 289, 480, 1075
SduI GDGCHC 2 cut(s) 991, 1027
SexAI ACCWGGT 1 cut(s) 241
SfaNI GCATC 2 cut(s) 445, 561
Sfr274I CTCGAG 1 cut(s) 1038
SinI GGWCC 2 cut(s) 245, 393
SlaI CTCGAG 1 cut(s) 1038
SmiI ATTTAAAT 1 cut(s) 361
SmiMI CAYNNNNRTG 3 cut(s) 17, 692, 1075
SmlI CTYRAG 2 cut(s) 1038, 1247
SmoI CTYRAG 2 cut(s) 1038, 1247
SphI GCATGC 1 cut(s) 1256
Sse9I AATT 7 cut(s) 205, 356, 626, 723, 876, 1091, 1148
SsiI CCGC 6 cut(s) 17, 338, 447, 520, 682, 1293
SspI AATATT 2 cut(s) 299, 1316
SspMI CTAG 3 cut(s) 215, 306, 1083
SstI GAGCTC 1 cut(s) 1027
StyD4I CCNGG 4 cut(s) 241, 287, 478, 1073
StyI CCWWGG 1 cut(s) 12
SwaI ATTTAAAT 1 cut(s) 361
TaaI ACNGT 2 cut(s) 61, 377
TaiI ACGT 1 cut(s) 736
TaqII GACCGA 1 cut(s) 749
TasI AATT 7 cut(s) 205, 356, 626, 723, 876, 1091, 1148
TfiI GAWTC 4 cut(s) 22, 112, 219, 1206
Tru1I TTAA 6 cut(s) 360, 531, 555, 810, 825, 1089
Tru9I TTAA 6 cut(s) 360, 531, 555, 810, 825, 1089
TseFI GTSAC 2 cut(s) 619, 1004
TseI GCWGC 3 cut(s) 211, 492, 962
Tsp45I GTSAC 2 cut(s) 619, 1004
TspDTI ATGAA 7 cut(s) 93, 146, 207, 554, 676, 810, 1327
TspGWI ACGGA 1 cut(s) 1142
Tth111I GACNNNGTC 1 cut(s) 243
VpaK11BI GGWCC 2 cut(s) 245, 393
XagI CCTNNNNNAGG 1 cut(s) 318
XapI RAATTY 3 cut(s) 356, 626, 1148
XceI RCATGY 4 cut(s) 101, 436, 1108, 1256
XhoI CTCGAG 1 cut(s) 1038
XmiI GTMKAC 1 cut(s) 637
XmnI GAANNNNTTC 1 cut(s) 704
XspI CTAG 3 cut(s) 215, 306, 1083
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.