Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0004005

Physical Location & Seq

Genomic Coordinates Reverse (-)

24775353 .. 24778721

Gene Structure 3369 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G020770.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2268 bp

ATGGGAGGCCACAGTTCGCAAGACGCAGGCTGCAGAAAACGTGCAAATAGTATATTTGGACTTTCTGTGGACCATGATCACGATCATGATAGTGATCATGATCATAGTAGTGACGATAGTGATTATGGCCCCGAGGATATGATATACAATGCAGACAAGATTCTTCCGAATGGAGACTACTACACCGGACAATGGTGTGAAAATTTTCCTCATGGCCAAGGCAAGTATTTGTGGACGGACGGGTGCATGTACGTAGGAGAATGGTTTAAAGGCAAAACTATGGGCAAAGGCAGGTTTAGTTGGCCTTCTGGGGCTACCTATGAAGGTGAGTTTAAAAGTGGTGCTAATGGTGACACATATAAGGGAGTTATGAATTTGAAGCATGGCCATGGTACGAAAAATTATTCCAATGGAGATTGGTATGAAGGAGAATGGCGAAGAGGGTTGCAAGAAGGCCATGGCAAGTACCAGTGGCTAAATGGGAATCATTACATTGGAGAATGGAAGAATGGAGAGATTTATGGCAAAGGCACGTTCGTTTGGAGTAATGGGAATAGATATGATGGAAATTGGGAAGAATGCGTGCCTAAAGGAAATGGGAATTTCAAATGGCCTGATGGGAGTCTTTATGTAGGGAATTGGAGTAAGGATCCAAGTGAGCAAAATGGTACTTATTATCCTTCTCAATCATCGTCAGATGCCAATCTCGAATGGAATCCTCAAGATGTATATAATATTGATTTAAAGGATTGTACGATTTGTCCCGGAGAGAAAGTTTCGATTTTACCATCACAGAAAAAGCTCGCAGTGTGGAGGTCAGCTAAGGGCAATGGGGTTAAGCCGAGAAGGATGTCAGTGGATGGAAGGGTAAGCGTAGGGCTGGAGAGACCTATGGATAGGTTGCAAATGTGGGATGGTGGAACTGGTGATGACCCTGCTTGTAATGCTGGTGATAGAGCTTCAACTGTTGGTAGAGATCAATTGAATGATCACGATCTCTTGGGTCTAAACGTTGAAGAAAGGGGCCAAATAAAGGTGCCCAGGGCAGGTAGGAGACAAGGGGAAACGATCAGTAGGGGCCACAAAAATTATGAACTCATGCTTAATTTGCAGCTTGGAATTAGGCATTCTGTTGGAAGACCAGGCCCGTCTGGATCCCTTGATCTAAAGCCTTCAGCTTTCGACCCCAGAGAAAAATATTGGACAAGGTTTCCTCCTGAAGGATCCAAATACACTCCACCACACCAATCTTGTGAATTTAAATGGAAGGATTATTGTCCTTTAGTCTTCAGAACTCTTAGGAAGTTGTTCAAGGTGGATGCAGCTGACTACATGCTCTCTATCTGTGGGAACGATGCTCTTCGAGAACTTTCTTCTCCTGGTAAAAGTGGTAGCTTCTTTTACTTGACTAATGATGACCGATACATGATTAAAACAATGAAGAAAGCAGAAGTAAAAGTTCTTATAAGGATGCTCTCTGCATATTACAACCATGTTCGAGCATACGAGAATACGCTGGTCGCTAAATTTTATGGTCTACACTGCGTAAAGCTAACCGGGCAACCTATTCAAAAAAAGGTGCGATTTATTATTATGGGAAATCTGTTTTGTTCCGAATATAGCATTCATCGACGTTTTGACTTGAAGGGATCTTCCCTTGGTCGAACAACAGATAAGGCTGAGACAGAAATTGATGAAATGACCATACTTAAAGACCTTGATCTTAACTTTATATTTCGACTTCAGAAGTCATGGTTTCAAGAGTTCTGCAGGCAAATTGATAGAGATTGTGAGTTTCTTGAACAGGAGAGAATAATGGATTATAGTCTCTTAGTTGGCCTTCATTTCAGAAATACATCAGCTGCTGGAGATCTGATTCCTTCTGGAGCTCTTACTCCTACTGGTGAGAATGAGAGTGATGGAACTCCCAAACTTTCCAGGGCAGACATGGATCAACTTCTTTTAGATCCATCCAGATGGGCTAGTATTAAACTGGGGCTAAACATGCCAGCACGCGTGGAGAAGACTGAGAGAAAAAGTGATTGTGAATTTCAGCTTGTAGGAGACCCAACAGGAGAGTATTATGAAGTTATAATGTTTTTTGGCATCATAGACATACTTCAAGACTATGACATTAGCAAGAAACTCGAGCATGCATACAAGTCCATCCAGTATGATCCAACTTCTATATCAGCCGTTGATCCTAAACAATATTCAAGGCGCTTTCGTGATTTCATATATAGAGTATTCGCTGAAGACACTCCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006810 GO:0006897 GO:0007164 GO:0008150 GO:0008152 GO:0009653 GO:0009664 GO:0009826 GO:0009827 GO:0009846 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010118 GO:0016020 GO:0016043 GO:0016049 GO:0016192 GO:0016301 GO:0016307 GO:0016308 GO:0016310 GO:0016324 GO:0016740 GO:0016772 GO:0016773 GO:0019637 GO:0022414 GO:0030154 GO:0030258 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0042545 GO:0042995 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0044706 GO:0045177 GO:0045229 GO:0046486 GO:0046488 GO:0046834 GO:0046854 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051179 GO:0051234 GO:0051704 GO:0060560 GO:0071554 GO:0071555 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0090406 GO:0098590 GO:0098657 GO:0120025

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04011 ko04070 ko04072 ko04139 ko04144 ko04666 ko04810 ko05231 map00562 map01100 map04011 map04070 map04072 map04139 map04144 map04666 map04810 map05231

Pfam Domains

Protein Families

MORN PIP5K

Protein Analysis

755

Amino Acids

86.1

Weight (kDa)

6.32

Isoelectric Point (pI)

28.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MORN	PF02493	141 - 162	5.3e-06	MORN repeat
PIP5K	PF01504	448 - 748	5.1e-103	Phosphatidylinositol-4-phosphate 5-Kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004005)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41210 AT3G56960 AT3G56960
fragaria_vesca	FvH4_6g25450
malus_domestica	MD14G1087700.v1.1
prunus_persica	Prupe.1G504300_v2.0.a1 Prupe.3G181700_v2.0.a1 Prupe.7G038800_v2.0.a1 Prupe.8G042800_v2.0.a1
pyrus_communis	pycom1481g00110 pycom14g07780
rosa_chinensis	RchiOBHm_Chr2g0125511 RchiOBHm_Chr3g0486631 RchiOBHm_Chr4g0389821 RchiOBHm_Chr4g0389831 RchiOBHm_Chr7g0202621
rosa_laevigata	RLG00000004364 RLG00000014288 RLG00000018868
rosa_multiflora	Rmu_co8380969.1_g000001 Rmu_sc0001493.1_g000011 Rmu_sc0004504.1_g000001
rosa_roxburghii	Rroxscaffold_2G00117950
rosa_rugosa	Rorug02G0257800 Rorug02G0257800
rosa_samantha	Rh2AG316600 Rh2AG506900 Rh2BG324300 Rh2CG306400 Rh2DG342700 Rh5AG307600
rosa_wichuraiana	Rw2G025540 Rw3G020770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1466, 2093
Acc36I	ACCTGC	2 cut(s)	282, 1037
AccB1I	GGYRCC	1 cut(s)	1036
AccI	GTMKAC	1 cut(s)	1537
AccII	CGCG	1 cut(s)	2016
AclI	AACGTT	1 cut(s)	1011
AcoI	YGGCCR	2 cut(s)	214, 385
AcsI	RAATTY	6 cut(s)	202, 373, 601, 1256, 1526, 2048
AcuI	CTGAAG	4 cut(s)	1158, 1239, 1273, 1727
AfaI	GTAC	5 cut(s)	251, 394, 467, 670, 754
AfiI	CCNNNNNNNGG	4 cut(s)	192, 1033, 1046, 1220
AflIII	ACRYGT	1 cut(s)	2014
AjnI	CCWGG	4 cut(s)	1040, 1141, 1378, 1937
Alw21I	GWGCWC	1 cut(s)	1891
Alw26I	GTCTC	6 cut(s)	168, 880, 1048, 1676, 1832, 2058
AlwNI	CAGNNNCTG	1 cut(s)	1865
Ama87I	CYCGRG	2 cut(s)	131, 2147
ApeKI	GCWGC	4 cut(s)	30, 1111, 1322, 1862
ApoI	RAATTY	6 cut(s)	202, 373, 601, 1256, 1526, 2048
Asp700I	GAANNNNTTC	2 cut(s)	204, 1307
AspLEI	GCGC	1 cut(s)	2223
AspS9I	GGNCC	5 cut(s)	70, 128, 1024, 1078, 1145
AsuC2I	CCSGG	2 cut(s)	765, 1558
AsuHPI	GGTGA	5 cut(s)	338, 362, 938, 962, 1916
AvaI	CYCGRG	2 cut(s)	131, 2147
AvaII	GGWCC	1 cut(s)	70
BaeGI	GKGCMC	1 cut(s)	1041
BalI	TGGCCA	2 cut(s)	216, 387
BamHI	GGATCC	3 cut(s)	649, 1154, 1223
BanI	GGYRCC	1 cut(s)	1036
BanII	GRGCYC	1 cut(s)	1891
BbsI	GAAGAC	4 cut(s)	1144, 1279, 2030, 2262
Bbv12I	GWGCWC	1 cut(s)	1891
BbvI	GCAGC	4 cut(s)	17, 1123, 1334, 1849
BccI	CCATC	9 cut(s)	557, 611, 796, 854, 908, 1913, 1971, 1978, 2174
BceAI	ACGGC	1 cut(s)	2180
BcgI	CGANNNNNNTGC	2 cut(s)	2128, 2162
BciT130I	CCWGG	4 cut(s)	1042, 1143, 1380, 1939
BclI	TGATCA	4 cut(s)	76, 94, 100, 988
BcnI	CCSGG	2 cut(s)	765, 1558
BcoDI	GTCTC	6 cut(s)	168, 880, 1048, 1676, 1832, 2058
BfaI	CTAG	1 cut(s)	1983
BfmI	CTRYAG	2 cut(s)	31, 1768
BfoI	RGCGCY	1 cut(s)	2224
BfuAI	ACCTGC	2 cut(s)	282, 1037
BglII	AGATCT	1 cut(s)	1870
BisI	GCNGC	4 cut(s)	31, 1112, 1323, 1863
BlsI	GCNGC	4 cut(s)	32, 1113, 1324, 1864
Bme1390I	CCNGG	6 cut(s)	765, 1042, 1143, 1380, 1558, 1939
Bme18I	GGWCC	1 cut(s)	70
BmeT110I	CYCGRG	2 cut(s)	131, 2147
BmgT120I	GGNCC	5 cut(s)	70, 128, 1024, 1078, 1145
BmiI	GGNNCC	7 cut(s)	130, 651, 1025, 1038, 1079, 1156, 1225
BmrFI	CCNGG	6 cut(s)	765, 1042, 1143, 1380, 1558, 1939
BmrI	ACTGGG	1 cut(s)	2003
BmsI	GCATC	5 cut(s)	688, 1309, 1345, 1461, 2115
BmuI	ACTGGG	1 cut(s)	2003
BpiI	GAAGAC	4 cut(s)	1144, 1279, 2030, 2262
BpmI	CTGGAG	3 cut(s)	902, 1887, 1905
Bpu10I	CCTNAGC	1 cut(s)	822
BpuEI	CTTGAG	1 cut(s)	705
BpuMI	CCSGG	2 cut(s)	765, 1558
BsaAI	YACGTR	1 cut(s)	253
BsaBI	GATNNNNATC	5 cut(s)	81, 93, 99, 702, 993
BsaI	GGTCTC	2 cut(s)	880, 2058
BsaJI	CCNNGG	8 cut(s)	132, 217, 388, 457, 1040, 1041, 1657, 1938
BsaWI	WCCGGW	1 cut(s)	185
BsaXI	ACNNNNNCTCC	2 cut(s)	759, 789
Bsc4I	CCNNNNNNNGG	4 cut(s)	192, 1033, 1046, 1220
Bse1I	ACTGG	5 cut(s)	469, 928, 1906, 1998, 2170
Bse3DI	GCAATG	1 cut(s)	835
Bse8I	GATNNNNATC	5 cut(s)	81, 93, 99, 702, 993
BseBI	CCWGG	4 cut(s)	1042, 1143, 1380, 1939
BseDI	CCNNGG	8 cut(s)	132, 217, 388, 457, 1040, 1041, 1657, 1938
BseGI	GGATG	7 cut(s)	855, 865, 919, 1324, 1476, 1970, 2166
BseJI	GATNNNNATC	5 cut(s)	81, 93, 99, 702, 993
BseLI	CCNNNNNNNGG	4 cut(s)	192, 1033, 1046, 1220
BseMI	GCAATG	1 cut(s)	835
BseMII	CTCAG	2 cut(s)	1671, 2019
BseNI	ACTGG	5 cut(s)	469, 928, 1906, 1998, 2170
BseSI	GKGCMC	1 cut(s)	1041
BseXI	GCAGC	4 cut(s)	17, 1123, 1334, 1849
Bsh1236I	CGCG	1 cut(s)	2016
BshNI	GGYRCC	1 cut(s)	1036
BsiHKAI	GWGCWC	1 cut(s)	1891
BsiHKCI	CYCGRG	2 cut(s)	131, 2147
BsiSI	CCGG	3 cut(s)	186, 765, 1557
BslFI	GGGAC	1 cut(s)	747
BslI	CCNNNNNNNGG	4 cut(s)	192, 1033, 1046, 1220
BsmAI	GTCTC	6 cut(s)	168, 880, 1048, 1676, 1832, 2058
BsmFI	GGGAC	1 cut(s)	747
BsmI	GAATGC	3 cut(s)	584, 1126, 1623
Bso31I	GGTCTC	2 cut(s)	880, 2058
BsoBI	CYCGRG	2 cut(s)	131, 2147
Bsp1286I	GDGCHC	2 cut(s)	1041, 1891
Bsp19I	CCATGG	2 cut(s)	388, 457
BspCNI	CTCAG	2 cut(s)	1672, 2020
BspFNI	CGCG	1 cut(s)	2016
BspHI	TCATGA	2 cut(s)	85, 97
BspLI	GGNNCC	7 cut(s)	130, 651, 1025, 1038, 1079, 1156, 1225
BspMAI	CTGCAG	2 cut(s)	35, 1772
BspMI	ACCTGC	2 cut(s)	282, 1037
BspQI	GCTCTTC	1 cut(s)	1365
BspT107I	GGYRCC	1 cut(s)	1036
BspTNI	GGTCTC	2 cut(s)	880, 2058
BsrDI	GCAATG	1 cut(s)	835
BsrI	ACTGG	5 cut(s)	469, 928, 1906, 1998, 2170
BssECI	CCNNGG	8 cut(s)	132, 217, 388, 457, 1040, 1041, 1657, 1938
BssT1I	CCWWGG	4 cut(s)	217, 388, 457, 1657
Bst2UI	CCWGG	4 cut(s)	1042, 1143, 1380, 1939
Bst4CI	ACNGT	2 cut(s)	14, 967
Bst6I	CTCTTC	2 cut(s)	433, 1365
BstBAI	YACGTR	1 cut(s)	253
BstC8I	GCNNGC	7 cut(s)	28, 584, 804, 1772, 2010, 2014, 2154
BstDEI	CTNAG	5 cut(s)	822, 1298, 1680, 1831, 2028
BstDSI	CCRYGG	2 cut(s)	388, 457
BstENI	CCTNNNNNAGG	1 cut(s)	1218
BstF5I	GGATG	7 cut(s)	855, 865, 919, 1324, 1476, 1970, 2166
BstFNI	CGCG	1 cut(s)	2016
BstH2I	RGCGCY	1 cut(s)	2224
BstHHI	GCGC	1 cut(s)	2223
BstMAI	GTCTC	6 cut(s)	168, 880, 1048, 1676, 1832, 2058
BstMWI	GCNNNNNNNGC	4 cut(s)	944, 1108, 1558, 2005
BstNI	CCWGG	4 cut(s)	1042, 1143, 1380, 1939
BstNSI	RCATGY	4 cut(s)	250, 1336, 2008, 2156
BstSCI	CCNGG	6 cut(s)	763, 1040, 1141, 1378, 1556, 1937
BstSFI	CTRYAG	2 cut(s)	31, 1768
BstSLI	GKGCMC	1 cut(s)	1041
BstSNI	TACGTA	1 cut(s)	253
BstUI	CGCG	1 cut(s)	2016
BstV1I	GCAGC	4 cut(s)	17, 1123, 1334, 1849
BstV2I	GAAGAC	4 cut(s)	1144, 1279, 2030, 2262
BstX2I	RGATCY	6 cut(s)	649, 1154, 1223, 1649, 1870, 1966
BstXI	CCANNNNNNTGG	1 cut(s)	1977
BstYI	RGATCY	6 cut(s)	649, 1154, 1223, 1649, 1870, 1966
BtgI	CCRYGG	2 cut(s)	388, 457
BtsCI	GGATG	7 cut(s)	855, 865, 919, 1324, 1476, 1970, 2166
BtsI	GCAGTG	2 cut(s)	813, 1540
BtsIMutI	CAGTG	4 cut(s)	476, 813, 861, 1540
BveI	ACCTGC	2 cut(s)	282, 1037
Cac8I	GCNNGC	7 cut(s)	28, 584, 804, 1772, 2010, 2014, 2154
CaiI	CAGNNNCTG	1 cut(s)	1865
CciI	TCATGA	2 cut(s)	85, 97
CfoI	GCGC	1 cut(s)	2223
Cfr13I	GGNCC	5 cut(s)	70, 128, 1024, 1078, 1145
CseI	GACGC	1 cut(s)	32
Csp6I	GTAC	5 cut(s)	250, 393, 466, 669, 753
CviQI	GTAC	5 cut(s)	250, 393, 466, 669, 753
DdeI	CTNAG	5 cut(s)	822, 1298, 1680, 1831, 2028
DraI	TTTAAA	4 cut(s)	268, 334, 744, 1261
EaeI	YGGCCR	2 cut(s)	214, 385
Eam1104I	CTCTTC	2 cut(s)	433, 1365
EarI	CTCTTC	2 cut(s)	433, 1365
Ecl136II	GAGCTC	1 cut(s)	1889
Eco105I	TACGTA	1 cut(s)	253
Eco130I	CCWWGG	4 cut(s)	217, 388, 457, 1657
Eco24I	GRGCYC	1 cut(s)	1891
Eco31I	GGTCTC	2 cut(s)	880, 2058
Eco47I	GGWCC	1 cut(s)	70
Eco53kI	GAGCTC	1 cut(s)	1889
Eco57I	CTGAAG	4 cut(s)	1158, 1239, 1273, 1727
Eco88I	CYCGRG	2 cut(s)	131, 2147
EcoICRI	GAGCTC	1 cut(s)	1889
EcoNI	CCTNNNNNAGG	1 cut(s)	1218
EcoRII	CCWGG	4 cut(s)	1040, 1141, 1378, 1937
EcoT14I	CCWWGG	4 cut(s)	217, 388, 457, 1657
EcoT22I	ATGCAT	1 cut(s)	2158
EcoT38I	GRGCYC	1 cut(s)	1891
ErhI	CCWWGG	4 cut(s)	217, 388, 457, 1657
FaqI	GGGAC	1 cut(s)	747
FbaI	TGATCA	4 cut(s)	76, 94, 100, 988
FblI	GTMKAC	1 cut(s)	1537
Fnu4HI	GCNGC	4 cut(s)	31, 1112, 1323, 1863
FokI	GGATG	7 cut(s)	862, 872, 926, 1331, 1483, 1957, 2153
FriOI	GRGCYC	1 cut(s)	1891
Fsp4HI	GCNGC	4 cut(s)	31, 1112, 1323, 1863
FspBI	CTAG	1 cut(s)	1983
GlaI	GCGC	1 cut(s)	2222
GluI	GCNGC	4 cut(s)	31, 1112, 1323, 1863
GsuI	CTGGAG	3 cut(s)	902, 1887, 1905
HaeII	RGCGCY	1 cut(s)	2224
HapII	CCGG	3 cut(s)	186, 765, 1557
HgaI	GACGC	1 cut(s)	32
HhaI	GCGC	1 cut(s)	2223
Hin6I	GCGC	1 cut(s)	2221
HinP1I	GCGC	1 cut(s)	2221
HinfI	GANTC	5 cut(s)	160, 484, 622, 715, 1876
HpaII	CCGG	3 cut(s)	186, 765, 1557
HphI	GGTGA	5 cut(s)	338, 362, 938, 962, 1916
Hpy166II	GTNNAC	3 cut(s)	70, 234, 1538
Hpy188I	TCNGA	7 cut(s)	168, 697, 1292, 1615, 1746, 1850, 1875
Hpy8I	GTNNAC	3 cut(s)	70, 234, 1538
Hpy99I	CGWCG	1 cut(s)	1635
HpyCH4III	ACNGT	2 cut(s)	14, 967
HpyCH4IV	ACGT	5 cut(s)	40, 252, 533, 1011, 1633
HpyF10VI	GCNNNNNNNGC	4 cut(s)	944, 1108, 1558, 2005
HpyF3I	CTNAG	5 cut(s)	822, 1298, 1680, 1831, 2028
HpySE526I	ACGT	5 cut(s)	40, 252, 533, 1011, 1633
HspAI	GCGC	1 cut(s)	2221
Ksp22I	TGATCA	4 cut(s)	76, 94, 100, 988
LguI	GCTCTTC	1 cut(s)	1365
LmnI	GCTCC	1 cut(s)	1886
Lsp1109I	GCAGC	4 cut(s)	17, 1123, 1334, 1849
LweI	GCATC	5 cut(s)	688, 1309, 1345, 1461, 2115
MaeI	CTAG	1 cut(s)	1983
MaeII	ACGT	5 cut(s)	40, 252, 533, 1011, 1633
MaeIII	GTNAC	2 cut(s)	110, 350
MfeI	CAATTG	1 cut(s)	980
MflI	RGATCY	6 cut(s)	649, 1154, 1223, 1649, 1870, 1966
MhlI	GDGCHC	2 cut(s)	1041, 1891
MlsI	TGGCCA	2 cut(s)	216, 387
MluI	ACGCGT	1 cut(s)	2014
MluNI	TGGCCA	2 cut(s)	216, 387
MlyI	GAGTC	1 cut(s)	631
MmeI	TCCRAC	2 cut(s)	1114, 2204
MnlI	CCTC	6 cut(s)	127, 219, 434, 729, 807, 1224
Mox20I	TGGCCA	2 cut(s)	216, 387
Mph1103I	ATGCAT	1 cut(s)	2158
MroXI	GAANNNNTTC	2 cut(s)	204, 1307
MscI	TGGCCA	2 cut(s)	216, 387
MslI	CAYNNNNRTG	5 cut(s)	84, 90, 108, 387, 1975
Msp20I	TGGCCA	2 cut(s)	216, 387
MspA1I	CMGCKG	2 cut(s)	1325, 1862
MspI	CCGG	3 cut(s)	186, 765, 1557
MspR9I	CCNGG	6 cut(s)	765, 1042, 1143, 1380, 1558, 1939
MunI	CAATTG	1 cut(s)	980
Mva1269I	GAATGC	3 cut(s)	584, 1126, 1623
MvaI	CCWGG	4 cut(s)	1042, 1143, 1380, 1939
MvnI	CGCG	1 cut(s)	2016
MwoI	GCNNNNNNNGC	4 cut(s)	944, 1108, 1558, 2005
NciI	CCSGG	2 cut(s)	765, 1558
NcoI	CCATGG	2 cut(s)	388, 457
NlaIV	GGNNCC	7 cut(s)	130, 651, 1025, 1038, 1079, 1156, 1225
NmeAIII	GCCGAG	1 cut(s)	867
NmuCI	GTSAC	2 cut(s)	110, 350
NsiI	ATGCAT	1 cut(s)	2158
NspI	RCATGY	4 cut(s)	250, 1336, 2008, 2156
PaeI	GCATGC	1 cut(s)	2156
PaeR7I	CTCGAG	1 cut(s)	2147
PagI	TCATGA	2 cut(s)	85, 97
PasI	CCCWGGG	1 cut(s)	1041
PciSI	GCTCTTC	1 cut(s)	1365
PctI	GAATGC	3 cut(s)	584, 1126, 1623
PdmI	GAANNNNTTC	2 cut(s)	204, 1307
PfeI	GAWTC	4 cut(s)	160, 484, 715, 1876
PfoI	TCCNGGA	1 cut(s)	763
PkrI	GCNGC	4 cut(s)	32, 1113, 1324, 1864
PleI	GAGTC	1 cut(s)	630
PpsI	GAGTC	1 cut(s)	630
Ppu21I	YACGTR	1 cut(s)	253
PsiI	TTATAA	2 cut(s)	1466, 2093
Psp124BI	GAGCTC	1 cut(s)	1891
Psp1406I	AACGTT	1 cut(s)	1011
Psp6I	CCWGG	4 cut(s)	1040, 1141, 1378, 1937
PspGI	CCWGG	4 cut(s)	1040, 1141, 1378, 1937
PspN4I	GGNNCC	7 cut(s)	130, 651, 1025, 1038, 1079, 1156, 1225
PspPI	GGNCC	5 cut(s)	70, 128, 1024, 1078, 1145
PspXI	VCTCGAGB	1 cut(s)	2147
PstI	CTGCAG	2 cut(s)	35, 1772
PstNI	CAGNNNCTG	1 cut(s)	1865
PsuI	RGATCY	6 cut(s)	649, 1154, 1223, 1649, 1870, 1966
PvuII	CAGCTG	2 cut(s)	1325, 1862
RsaI	GTAC	5 cut(s)	251, 394, 467, 670, 754
RsaNI	GTAC	5 cut(s)	250, 393, 466, 669, 753
RseI	CAYNNNNRTG	5 cut(s)	84, 90, 108, 387, 1975
SacI	GAGCTC	1 cut(s)	1891
SapI	GCTCTTC	1 cut(s)	1365
SatI	GCNGC	4 cut(s)	31, 1112, 1323, 1863
Sau96I	GGNCC	5 cut(s)	70, 128, 1024, 1078, 1145
SchI	GAGTC	1 cut(s)	631
ScrFI	CCNGG	6 cut(s)	765, 1042, 1143, 1380, 1558, 1939
SduI	GDGCHC	2 cut(s)	1041, 1891
SfaNI	GCATC	5 cut(s)	688, 1309, 1345, 1461, 2115
SfcI	CTRYAG	2 cut(s)	31, 1768
Sfr274I	CTCGAG	1 cut(s)	2147
SinI	GGWCC	1 cut(s)	70
SlaI	CTCGAG	1 cut(s)	2147
SmiI	ATTTAAAT	1 cut(s)	1261
SmiMI	CAYNNNNRTG	5 cut(s)	84, 90, 108, 387, 1975
SmlI	CTYRAG	2 cut(s)	720, 2147
SmoI	CTYRAG	2 cut(s)	720, 2147
SnaBI	TACGTA	1 cut(s)	253
SphI	GCATGC	1 cut(s)	2156
SspI	AATATT	3 cut(s)	736, 1199, 2213
SspMI	CTAG	1 cut(s)	1983
SstI	GAGCTC	1 cut(s)	1891
StyD4I	CCNGG	6 cut(s)	763, 1040, 1141, 1378, 1556, 1937
StyI	CCWWGG	4 cut(s)	217, 388, 457, 1657
SwaI	ATTTAAAT	1 cut(s)	1261
TaaI	ACNGT	2 cut(s)	14, 967
TaiI	ACGT	5 cut(s)	43, 255, 536, 1014, 1636
TaqI	TCGA	9 cut(s)	708, 779, 1182, 1363, 1498, 1630, 1663, 1738, 2148
TaqII	GACCGA	1 cut(s)	1434
TfiI	GAWTC	4 cut(s)	160, 484, 715, 1876
TscAI	CASTG	4 cut(s)	476, 813, 861, 1547
TseFI	GTSAC	2 cut(s)	110, 350
TseI	GCWGC	4 cut(s)	30, 1111, 1322, 1862
Tsp45I	GTSAC	2 cut(s)	110, 350
TspGWI	ACGGA	1 cut(s)	251
TspRI	CASTG	4 cut(s)	476, 813, 861, 1547
VpaK11BI	GGWCC	1 cut(s)	70
XagI	CCTNNNNNAGG	1 cut(s)	1218
XapI	RAATTY	6 cut(s)	202, 373, 601, 1256, 1526, 2048
XceI	RCATGY	4 cut(s)	250, 1336, 2008, 2156
XcmI	CCANNNNNNNNNTGG	2 cut(s)	476, 1945
XhoI	CTCGAG	1 cut(s)	2147
XmiI	GTMKAC	1 cut(s)	1537
XmnI	GAANNNNTTC	2 cut(s)	204, 1307
XspI	CTAG	1 cut(s)	1983
Zsp2I	ATGCAT	1 cut(s)	2158

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.