Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0009861

Physical Location & Seq

Genomic Coordinates Forward (+)

5903816 .. 5907042

Gene Structure 3227 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGGGGTGCGCCCAATCGAGAATCGAAAACGAGGAATCCGTGTTGCGATGCAAGGACCGCCGGAACCTGATGAAAGAGGCGGTGGTGGCCAGGAACGCCTTCGCTTCCGGCCATTCTGGCTACGCCGTGGCCTTGAAGAACGCCGGTGCCGCGTTGAGTGATTACGGCCATGGAGAAACCCAAGTGACCCCGGAGATGGAAATCCTTCACAGCCAACATCGGCCGATGGACCCCGCATCTGAGCCGCCGCCGCCTCCGCCGCCCCATCTCGAGAACCTGAACCTTCCGCCGCCTCCGCCGCCTCTGCCCACTTTCACTCCAAGCCCGATCAAGCGGGCCACCAGCATGCCAGTGATGAGCGCTGAGGCTCGGAAAATGGGGGGGCGGAGAGTTGGGCTGGCCATTGCGGAGGAGGATGAGGAAGAAGAGGACCATGAACATGATGATGAGGATGAGAGCCATAAAGGGTTTCAGAGGAGATCGAGAAATGGGGCTTCGGAGACGACATCGTCGCCGCCGAGGACGCCGGAGATGAAGGCGGTGCCTCCGATGCCGGAGTCGAAGGGCATGGCTTGGGACTATTTCTTTATGGTGGATAACATGCCGGGACCATCTTTGAGTGAGAATGAAGAGGCTGAGGAATTTGGTGAAGATGAAAATATGGGGGTTGGCGGCGGTGCTGATTTGGGTGATGAGGTTGAGCCCAAGACTCCGGAGAAGGTGGAGGAGATTGTGGAGAAGGCGGAAGAGGAAACTCCGGTGGCAATCGAGCATTCGAAGACTGCGCCACCGGAGTTTAGCAGGAGAGTAGCTAATGTGATTCCTGGTGTGACTTTGATGGACATATTGAATAAGATTGACGACCATTTCTTGAAGGCCTCGGAGAGTGCTCAGGAGGTTTCGAAGATGCTCGAGGCCACTCGGTTGCACTATCACTCGAATTTTGCAGATAATCGAGGACACATTGATCACTCTGCAAGGGTCATGCGTGTTATTACATGGAATCAGTCGTTCAGAGGCATGCCAAACGGTGATGGGAAGGATGAAAACTCAGAAGATTATGAAACTCATGCCACTGTTTTGGATAAGATGTTGGCATGGGAAAAGAAACTTTATGATGAAGTGAAGCAAGGGGAGCTTATGAAGGTTGAGTATCAGAGAAAAGTTGCAGTGCTTAATAAGCAGAAGAAACGCAGTGCTAGTGCTGAAACATTGGAAAAAACAAAAGCAGCTGTAAGTCATTTGCATACAAGATACATAGTTGACATGCAGTCCATGGATTCTACAGCTTCAGAAGTAAATCAATTACGGGATGAACAGCTGTACCCTAAACTTGTTTCTCTAGCTGAAGGGATGGCAAAAATGTGGGAGAACATGTGCACACATCACGGCAGCCAGTTGGAGATTGTTACAGGTCTAAAGTCCCTAGACATTGCCCATACTCCGATGGAAACAACCAAGCACCACCATGACCGCACTGTCCAGCTTTGCAATGTTCTCCAAGAATGGCATTCTCACTTTGAAAAGCTCGTGACTCATCAAAAACAATACATCCAAGCTCTTAATAGTTGGGTGAAGCTAAATCTCATACCTATCGAGAGCAGCTTAAAAGAGAAAATATCATCCCCGCCAAGAGTTCAGCGTCCACCAATCCAAGCTCTCCTCCATTCATGGCACGATTCTCTTGAAAAGCTTCCTGATGAACTTGCAAAATCTGCAATATCGTCCTTTGCAGCTGTGATAAAGACTATCATACTTCATCAGGAGGAAGAGATGAAGCTAAAAGAAAAGTTTGAGGAGACACGGAAGGAGTTTCTGCGTAAAAGTCAGGCCTTCGAAGACTGGTACCAAAAGTACGCGCAGAGACACGCGGAAATGGATCAGGAGAGAGGTGAAGATGCAATTCCCAAGGACCCGGTCTCAGAGAAGAAATTCATTGTTGAGAGCTTGAAGAAAAGAATGGAAGACGAATGTGAAGCTCACCAGAGACACTGTATCCAGGTGAGGGAGAAGTCACTTGGGAGTCTCAAAACTCGCTTGCCTGAGATCTTCCGCGCCATGACAGACTACGCTCATACCTGTTCCGAGGTTTATGGAAAACTGAGGTCCACCACAGAGGCACAAGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF630 DUF632

Protein Analysis

710

Amino Acids

80.45

Weight (kDa)

5.63

Isoelectric Point (pI)

54.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF630	PF04783	1 - 59	2.2e-20	Protein of unknown function (DUF630)
DUF632	PF04782	279 - 582	2.1e-106	Protein of unknown function (DUF632)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009861)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G25590
fragaria_vesca	FvH4_2g36270
malus_domestica	MD08G1120200.v1.1 MD15G1099400.v1.1
prunus_persica	Prupe.1G454100_v2.0.a1
pyrus_communis	pycom15g09140
rosa_chinensis	RchiOBHm_Chr6g0305621
rosa_laevigata	RLG00000010872 RLG00000018217
rosa_multiflora	Rmu_co8402805.1_g000001 Rmu_co8491339.1_g000001 Rmu_sc0001809.1_g000015
rosa_roxburghii	Rroxscaffold_7G00162520
rosa_rugosa	Rorug06G0342200
rosa_samantha	Rh2AG452300 Rh4BG182200 Rh6AG454100 Rh6BG447400 Rh6CG467800 Rh6DG454400
rosa_wichuraiana	Rw6G039590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	508, 1478
Acc65I	GGTACC	1 cut(s)	1845
AccB1I	GGYRCC	3 cut(s)	146, 541, 1845
AccII	CGCG	4 cut(s)	152, 1859, 1871, 2055
AccIII	TCCGGA	1 cut(s)	712
AclWI	GGATC	1 cut(s)	1887
AcoI	YGGCCR	5 cut(s)	87, 109, 166, 221, 399
AcsI	RAATTY	3 cut(s)	641, 940, 1931
AcuI	CTGAAG	2 cut(s)	1275, 1368
AcyI	GRCGYC	1 cut(s)	524
AfaI	GTAC	3 cut(s)	1325, 1847, 1856
AfeI	AGCGCT	1 cut(s)	361
AfiI	CCNNNNNNNGG	2 cut(s)	196, 2005
AflIII	ACRYGT	1 cut(s)	1374
AgsI	TTSAA	6 cut(s)	136, 850, 874, 1523, 1688, 1951
AhdI	GACNNNNNGTC	1 cut(s)	1270
AjnI	CCWGG	3 cut(s)	89, 823, 1998
Alw21I	GWGCWC	2 cut(s)	892, 1382
Alw26I	GTCTC	6 cut(s)	494, 1793, 1858, 1924, 1981, 2030
Alw44I	GTGCAC	1 cut(s)	1378
AlwI	GGATC	1 cut(s)	1887
Ama87I	CYCGRG	2 cut(s)	269, 911
Aor13HI	TCCGGA	1 cut(s)	712
Aor51HI	AGCGCT	1 cut(s)	361
ApaLI	GTGCAC	1 cut(s)	1378
ApeKI	GCWGC	4 cut(s)	1229, 1392, 1602, 1733
ApoI	RAATTY	3 cut(s)	641, 940, 1931
Asp700I	GAANNNNTTC	4 cut(s)	98, 204, 1692, 1931
Asp718I	GGTACC	1 cut(s)	1845
AspLEI	GCGC	5 cut(s)	11, 362, 787, 1861, 2057
AspS9I	GGNCC	7 cut(s)	55, 229, 336, 430, 608, 1912, 2106
AsuC2I	CCSGG	3 cut(s)	191, 606, 1916
AsuHPI	GGTGA	7 cut(s)	659, 701, 1043, 1585, 1904, 1973, 2014
AsuII	TTCGAA	3 cut(s)	776, 902, 1836
AvaI	CYCGRG	2 cut(s)	269, 911
AvaII	GGWCC	6 cut(s)	55, 229, 430, 608, 1912, 2106
BaeGI	GKGCMC	1 cut(s)	1382
BaeI	ACNNNNGTAYC	2 cut(s)	1307, 1340
BalI	TGGCCA	2 cut(s)	89, 401
BanI	GGYRCC	3 cut(s)	146, 541, 1845
BanII	GRGCYC	1 cut(s)	705
BauI	CACGAG	1 cut(s)	1529
BbsI	GAAGAC	3 cut(s)	785, 1845, 1971
Bbv12I	GWGCWC	2 cut(s)	892, 1382
BbvCI	CCTCAGC	2 cut(s)	363, 636
BbvI	GCAGC	4 cut(s)	1241, 1404, 1614, 1745
BccI	CCATC	8 cut(s)	190, 220, 273, 619, 832, 1028, 1348, 1441
BceAI	ACGGC	3 cut(s)	110, 181, 1405
BciT130I	CCWGG	3 cut(s)	91, 825, 2000
BciVI	GTATCC	1 cut(s)	2006
BclI	TGATCA	1 cut(s)	967
BcnI	CCSGG	3 cut(s)	191, 606, 1916
BcoDI	GTCTC	6 cut(s)	494, 1793, 1858, 1924, 1981, 2030
BfaI	CTAG	3 cut(s)	1200, 1343, 1427
BfmI	CTRYAG	1 cut(s)	1284
BfoI	RGCGCY	1 cut(s)	363
BfuI	GTATCC	1 cut(s)	2006
BglI	GCCNNNNNGGC	1 cut(s)	117
BglII	AGATCT	1 cut(s)	2046
Bme1390I	CCNGG	6 cut(s)	91, 191, 606, 825, 1916, 2000
Bme18I	GGWCC	6 cut(s)	55, 229, 430, 608, 1912, 2106
BmeRI	GACNNNNNGTC	1 cut(s)	1270
BmeT110I	CYCGRG	2 cut(s)	269, 911
BmgT120I	GGNCC	7 cut(s)	55, 229, 336, 430, 608, 1912, 2106
BmiI	GGNNCC	7 cut(s)	65, 148, 231, 543, 609, 1847, 1914
BmrFI	CCNGG	6 cut(s)	91, 191, 606, 825, 1916, 2000
BmsI	GCATC	5 cut(s)	38, 245, 540, 897, 1888
BpiI	GAAGAC	3 cut(s)	785, 1845, 1971
Bpu10I	CCTNAGC	3 cut(s)	363, 636, 891
Bpu14I	TTCGAA	3 cut(s)	776, 902, 1836
BpuMI	CCSGG	3 cut(s)	191, 606, 1916
BsaBI	GATNNNNATC	1 cut(s)	200
BsaHI	GRCGYC	1 cut(s)	524
BsaI	GGTCTC	1 cut(s)	1924
BsaJI	CCNNGG	8 cut(s)	126, 169, 189, 518, 879, 1275, 1908, 2085
BsaWI	WCCGGW	3 cut(s)	712, 757, 790
BsaXI	ACNNNNNCTCC	4 cut(s)	301, 331, 1361, 1391
Bsc4I	CCNNNNNNNGG	2 cut(s)	196, 2005
Bse118I	RCCGGY	1 cut(s)	143
Bse1I	ACTGG	3 cut(s)	350, 1396, 1847
Bse3DI	GCAATG	3 cut(s)	402, 1431, 1498
Bse8I	GATNNNNATC	1 cut(s)	200
BseAI	TCCGGA	1 cut(s)	712
BseBI	CCWGG	3 cut(s)	91, 825, 2000
BseDI	CCNNGG	8 cut(s)	126, 169, 189, 518, 879, 1275, 1908, 2085
BseGI	GGATG	7 cut(s)	421, 457, 1048, 1318, 1359, 1551, 1622
BseJI	GATNNNNATC	1 cut(s)	200
BseLI	CCNNNNNNNGG	2 cut(s)	196, 2005
BseMI	GCAATG	3 cut(s)	402, 1431, 1498
BseMII	CTCAG	8 cut(s)	231, 354, 627, 905, 1065, 1935, 2034, 2093
BseNI	ACTGG	3 cut(s)	350, 1396, 1847
BseRI	GAGGAG	5 cut(s)	425, 490, 740, 1652, 1811
BseSI	GKGCMC	1 cut(s)	1382
BseX3I	CGGCCG	1 cut(s)	221
BseXI	GCAGC	4 cut(s)	1241, 1404, 1614, 1745
Bsh1236I	CGCG	4 cut(s)	152, 1859, 1871, 2055
Bsh1285I	CGRYCG	1 cut(s)	224
BshNI	GGYRCC	3 cut(s)	146, 541, 1845
BsiEI	CGRYCG	1 cut(s)	224
BsiHKAI	GWGCWC	2 cut(s)	892, 1382
BsiHKCI	CYCGRG	2 cut(s)	269, 911
BslFI	GGGAC	3 cut(s)	590, 621, 1408
BslI	CCNNNNNNNGG	2 cut(s)	196, 2005
BsmAI	GTCTC	6 cut(s)	494, 1793, 1858, 1924, 1981, 2030
BsmBI	CGTCTC	1 cut(s)	494
BsmFI	GGGAC	3 cut(s)	590, 621, 1408
BsmI	GAATGC	2 cut(s)	772, 1510
Bso31I	GGTCTC	1 cut(s)	1924
BsoBI	CYCGRG	2 cut(s)	269, 911
Bsp119I	TTCGAA	3 cut(s)	776, 902, 1836
Bsp1286I	GDGCHC	3 cut(s)	705, 892, 1382
Bsp13I	TCCGGA	1 cut(s)	712
Bsp143I	GATC	5 cut(s)	327, 479, 967, 1879, 2046
Bsp19I	CCATGG	2 cut(s)	169, 1275
BspCNI	CTCAG	8 cut(s)	232, 355, 628, 904, 1064, 1934, 2035, 2094
BspEI	TCCGGA	1 cut(s)	712
BspFNI	CGCG	4 cut(s)	152, 1859, 1871, 2055
BspLI	GGNNCC	7 cut(s)	65, 148, 231, 543, 609, 1847, 1914
BspPI	GGATC	1 cut(s)	1887
BspT104I	TTCGAA	3 cut(s)	776, 902, 1836
BspT107I	GGYRCC	3 cut(s)	146, 541, 1845
BspTNI	GGTCTC	1 cut(s)	1924
BsrDI	GCAATG	3 cut(s)	402, 1431, 1498
BsrFI	RCCGGY	1 cut(s)	143
BsrI	ACTGG	3 cut(s)	350, 1396, 1847
BssAI	RCCGGY	1 cut(s)	143
BssECI	CCNNGG	8 cut(s)	126, 169, 189, 518, 879, 1275, 1908, 2085
BssMI	GATC	5 cut(s)	327, 479, 967, 1879, 2046
BssNI	GRCGYC	1 cut(s)	524
BssSI	CACGAG	1 cut(s)	1529
BssT1I	CCWWGG	3 cut(s)	169, 1275, 1908
Bst2BI	CACGAG	1 cut(s)	1529
Bst2UI	CCWGG	3 cut(s)	91, 825, 2000
Bst4CI	ACNGT	4 cut(s)	1031, 1078, 1480, 1994
Bst6I	CTCTTC	4 cut(s)	420, 624, 741, 1764
BstACI	GRCGYC	1 cut(s)	524
BstAPI	GCANNNNNTGC	1 cut(s)	1715
BstBI	TTCGAA	3 cut(s)	776, 902, 1836
BstC8I	GCNNGC	5 cut(s)	336, 347, 399, 1022, 2039
BstDEI	CTNAG	8 cut(s)	240, 363, 636, 891, 1051, 1921, 2043, 2102
BstDSI	CCRYGG	3 cut(s)	126, 169, 1275
BstF5I	GGATG	7 cut(s)	421, 457, 1048, 1318, 1359, 1551, 1622
BstFNI	CGCG	4 cut(s)	152, 1859, 1871, 2055
BstH2I	RGCGCY	1 cut(s)	363
BstHHI	GCGC	5 cut(s)	11, 362, 787, 1861, 2057
BstKTI	GATC	5 cut(s)	330, 482, 970, 1882, 2049
BstMAI	GTCTC	6 cut(s)	494, 1793, 1858, 1924, 1981, 2030
BstMBI	GATC	5 cut(s)	327, 479, 967, 1879, 2046
BstMCI	CGRYCG	1 cut(s)	224
BstNI	CCWGG	3 cut(s)	91, 825, 2000
BstNSI	RCATGY	5 cut(s)	349, 604, 1024, 1270, 1378
BstSCI	CCNGG	6 cut(s)	89, 189, 604, 823, 1914, 1998
BstSFI	CTRYAG	1 cut(s)	1284
BstSLI	GKGCMC	1 cut(s)	1382
BstUI	CGCG	4 cut(s)	152, 1859, 1871, 2055
BstV1I	GCAGC	4 cut(s)	1241, 1404, 1614, 1745
BstV2I	GAAGAC	3 cut(s)	785, 1845, 1971
BstX2I	RGATCY	1 cut(s)	2046
BstXI	CCANNNNNNTGG	1 cut(s)	1081
BstYI	RGATCY	1 cut(s)	2046
BstZI	CGGCCG	1 cut(s)	221
BsuI	GTATCC	1 cut(s)	2006
BtgI	CCRYGG	3 cut(s)	126, 169, 1275
BtgZI	GCGATG	1 cut(s)	61
BtsCI	GGATG	7 cut(s)	421, 457, 1048, 1318, 1359, 1551, 1622
BtsI	GCAGTG	2 cut(s)	1176, 1201
BtsIMutI	CAGTG	6 cut(s)	357, 1074, 1176, 1201, 1476, 1990
Cac8I	GCNNGC	5 cut(s)	336, 347, 399, 1022, 2039
CfoI	GCGC	5 cut(s)	11, 362, 787, 1861, 2057
Cfr10I	RCCGGY	1 cut(s)	143
Cfr13I	GGNCC	7 cut(s)	55, 229, 336, 430, 608, 1912, 2106
CseI	GACGC	2 cut(s)	532, 1631
Csp6I	GTAC	3 cut(s)	1324, 1846, 1855
CviQI	GTAC	3 cut(s)	1324, 1846, 1855
DdeI	CTNAG	8 cut(s)	240, 363, 636, 891, 1051, 1921, 2043, 2102
DpnI	GATC	5 cut(s)	329, 481, 969, 1881, 2048
DpnII	GATC	5 cut(s)	327, 479, 967, 1879, 2046
DrdI	GACNNNNNNGTC	2 cut(s)	508, 1478
DriI	GACNNNNNGTC	1 cut(s)	1270
DseDI	GACNNNNNNGTC	2 cut(s)	508, 1478
EaeI	YGGCCR	5 cut(s)	87, 109, 166, 221, 399
EagI	CGGCCG	1 cut(s)	221
Eam1104I	CTCTTC	4 cut(s)	420, 624, 741, 1764
Eam1105I	GACNNNNNGTC	1 cut(s)	1270
EarI	CTCTTC	4 cut(s)	420, 624, 741, 1764
EciI	GGCGGA	5 cut(s)	246, 276, 285, 400, 758
EclXI	CGGCCG	1 cut(s)	221
Eco130I	CCWWGG	3 cut(s)	169, 1275, 1908
Eco147I	AGGCCT	2 cut(s)	878, 1832
Eco24I	GRGCYC	1 cut(s)	705
Eco31I	GGTCTC	1 cut(s)	1924
Eco47I	GGWCC	6 cut(s)	55, 229, 430, 608, 1912, 2106
Eco47III	AGCGCT	1 cut(s)	361
Eco52I	CGGCCG	1 cut(s)	221
Eco57I	CTGAAG	2 cut(s)	1275, 1368
Eco88I	CYCGRG	2 cut(s)	269, 911
EcoO109I	RGGNCCY	1 cut(s)	1912
EcoRII	CCWGG	3 cut(s)	89, 823, 1998
EcoT14I	CCWWGG	3 cut(s)	169, 1275, 1908
EcoT38I	GRGCYC	1 cut(s)	705
ErhI	CCWWGG	3 cut(s)	169, 1275, 1908
Esp3I	CGTCTC	1 cut(s)	494
FalI	AAGNNNNNCTT	2 cut(s)	1122, 1154
FaqI	GGGAC	3 cut(s)	590, 621, 1408
FauI	CCCGC	3 cut(s)	241, 327, 1635
FbaI	TGATCA	1 cut(s)	967
FokI	GGATG	7 cut(s)	428, 464, 1055, 1325, 1366, 1538, 1609
FriOI	GRGCYC	1 cut(s)	705
FspBI	CTAG	3 cut(s)	1200, 1343, 1427
GlaI	GCGC	5 cut(s)	10, 361, 786, 1860, 2056
HaeII	RGCGCY	1 cut(s)	363
HgaI	GACGC	2 cut(s)	532, 1631
HhaI	GCGC	5 cut(s)	11, 362, 787, 1861, 2057
Hin1I	GRCGYC	1 cut(s)	524
Hin6I	GCGC	5 cut(s)	9, 360, 785, 1859, 2055
HinP1I	GCGC	5 cut(s)	9, 360, 785, 1859, 2055
HincII	GTYRAC	1 cut(s)	1264
HindII	GTYRAC	1 cut(s)	1264
HindIII	AAGCTT	1 cut(s)	1691
HphI	GGTGA	7 cut(s)	659, 701, 1043, 1585, 1904, 1973, 2014
Hpy166II	GTNNAC	4 cut(s)	1264, 1380, 1646, 2109
Hpy8I	GTNNAC	4 cut(s)	1264, 1380, 1646, 2109
Hpy99I	CGWCG	1 cut(s)	514
HpyCH4III	ACNGT	4 cut(s)	1031, 1078, 1480, 1994
HpyF3I	CTNAG	8 cut(s)	240, 363, 636, 891, 1051, 1921, 2043, 2102
Hsp92I	GRCGYC	1 cut(s)	524
HspAI	GCGC	5 cut(s)	9, 360, 785, 1859, 2055
Kpn2I	TCCGGA	1 cut(s)	712
KpnI	GGTACC	1 cut(s)	1849
Ksp22I	TGATCA	1 cut(s)	967
Kzo9I	GATC	5 cut(s)	327, 479, 967, 1879, 2046
LmnI	GCTCC	1 cut(s)	1135
Lsp1109I	GCAGC	4 cut(s)	1241, 1404, 1614, 1745
LweI	GCATC	5 cut(s)	38, 245, 540, 897, 1888
MaeI	CTAG	3 cut(s)	1200, 1343, 1427
MaeIII	GTNAC	5 cut(s)	184, 829, 1408, 1531, 2013
MalI	GATC	5 cut(s)	329, 481, 969, 1881, 2048
MboI	GATC	5 cut(s)	327, 479, 967, 1879, 2046
MflI	RGATCY	1 cut(s)	2046
MhlI	GDGCHC	3 cut(s)	705, 892, 1382
MlsI	TGGCCA	2 cut(s)	89, 401
MluCI	AATT	5 cut(s)	641, 940, 1304, 1902, 1931
MluNI	TGGCCA	2 cut(s)	89, 401
MlyI	GAGTC	4 cut(s)	566, 703, 1528, 2032
MmeI	TCCRAC	1 cut(s)	1380
Mox20I	TGGCCA	2 cut(s)	89, 401
MroI	TCCGGA	1 cut(s)	712
MroXI	GAANNNNTTC	4 cut(s)	98, 204, 1692, 1931
MscI	TGGCCA	2 cut(s)	89, 401
MseI	TTAA	3 cut(s)	1176, 1563, 1607
MslI	CAYNNNNRTG	6 cut(s)	344, 350, 438, 444, 1467, 2125
Msp20I	TGGCCA	2 cut(s)	89, 401
MspA1I	CMGCKG	3 cut(s)	1232, 1321, 1736
MspR9I	CCNGG	6 cut(s)	91, 191, 606, 825, 1916, 2000
Mva1269I	GAATGC	2 cut(s)	772, 1510
MvaI	CCWGG	3 cut(s)	91, 825, 2000
MvnI	CGCG	4 cut(s)	152, 1859, 1871, 2055
NciI	CCSGG	3 cut(s)	191, 606, 1916
NcoI	CCATGG	2 cut(s)	169, 1275
NdeII	GATC	5 cut(s)	327, 479, 967, 1879, 2046
NlaIV	GGNNCC	7 cut(s)	65, 148, 231, 543, 609, 1847, 1914
NmeAIII	GCCGAG	1 cut(s)	543
NmuCI	GTSAC	4 cut(s)	184, 829, 1531, 2013
NspI	RCATGY	5 cut(s)	349, 604, 1024, 1270, 1378
NspV	TTCGAA	3 cut(s)	776, 902, 1836
PaeI	GCATGC	2 cut(s)	349, 1024
PaeR7I	CTCGAG	2 cut(s)	269, 911
PceI	AGGCCT	2 cut(s)	878, 1832
PciI	ACATGT	1 cut(s)	1374
PcsI	WCGNNNNNNNCGW	2 cut(s)	36, 515
PctI	GAATGC	2 cut(s)	772, 1510
PdmI	GAANNNNTTC	4 cut(s)	98, 204, 1692, 1931
PfeI	GAWTC	6 cut(s)	21, 35, 820, 1003, 1280, 1679
PflFI	GACNNNGTC	2 cut(s)	508, 1916
PleI	GAGTC	4 cut(s)	565, 703, 1528, 2031
PpsI	GAGTC	4 cut(s)	565, 703, 1528, 2031
PpuMI	RGGWCCY	1 cut(s)	1912
PscI	ACATGT	1 cut(s)	1374
Psp5II	RGGWCCY	1 cut(s)	1912
Psp6I	CCWGG	3 cut(s)	89, 823, 1998
PspGI	CCWGG	3 cut(s)	89, 823, 1998
PspN4I	GGNNCC	7 cut(s)	65, 148, 231, 543, 609, 1847, 1914
PspPI	GGNCC	7 cut(s)	55, 229, 336, 430, 608, 1912, 2106
PspPPI	RGGWCCY	1 cut(s)	1912
PspXI	VCTCGAGB	1 cut(s)	911
PsuI	RGATCY	1 cut(s)	2046
PsyI	GACNNNGTC	2 cut(s)	508, 1916
PvuII	CAGCTG	3 cut(s)	1232, 1321, 1736
RsaI	GTAC	3 cut(s)	1325, 1847, 1856
RsaNI	GTAC	3 cut(s)	1324, 1846, 1855
RseI	CAYNNNNRTG	6 cut(s)	344, 350, 438, 444, 1467, 2125
SaqAI	TTAA	3 cut(s)	1176, 1563, 1607
Sau3AI	GATC	5 cut(s)	327, 479, 967, 1879, 2046
Sau96I	GGNCC	7 cut(s)	55, 229, 336, 430, 608, 1912, 2106
SchI	GAGTC	4 cut(s)	566, 703, 1528, 2032
ScrFI	CCNGG	6 cut(s)	91, 191, 606, 825, 1916, 2000
SduI	GDGCHC	3 cut(s)	705, 892, 1382
SfaNI	GCATC	5 cut(s)	38, 245, 540, 897, 1888
SfcI	CTRYAG	1 cut(s)	1284
Sfr274I	CTCGAG	2 cut(s)	269, 911
SfuI	TTCGAA	3 cut(s)	776, 902, 1836
SgrAI	CRCCGGYG	1 cut(s)	143
SinI	GGWCC	6 cut(s)	55, 229, 430, 608, 1912, 2106
SlaI	CTCGAG	2 cut(s)	269, 911
SmiMI	CAYNNNNRTG	6 cut(s)	344, 350, 438, 444, 1467, 2125
SmlI	CTYRAG	2 cut(s)	269, 911
SmoI	CTYRAG	2 cut(s)	269, 911
SphI	GCATGC	2 cut(s)	349, 1024
Sse9I	AATT	5 cut(s)	641, 940, 1304, 1902, 1931
SseBI	AGGCCT	2 cut(s)	878, 1832
SspMI	CTAG	3 cut(s)	1200, 1343, 1427
StuI	AGGCCT	2 cut(s)	878, 1832
StyD4I	CCNGG	6 cut(s)	89, 189, 604, 823, 1914, 1998
StyI	CCWWGG	3 cut(s)	169, 1275, 1908
TaaI	ACNGT	4 cut(s)	1031, 1078, 1480, 1994
TasI	AATT	5 cut(s)	641, 940, 1304, 1902, 1931
TauI	GCSGC	9 cut(s)	152, 247, 250, 253, 262, 292, 301, 517, 675
TfiI	GAWTC	6 cut(s)	21, 35, 820, 1003, 1280, 1679
Tru1I	TTAA	3 cut(s)	1176, 1563, 1607
Tru9I	TTAA	3 cut(s)	1176, 1563, 1607
TscAI	CASTG	6 cut(s)	357, 1081, 1176, 1201, 1483, 1997
TseFI	GTSAC	4 cut(s)	184, 829, 1531, 2013
TseI	GCWGC	4 cut(s)	1229, 1392, 1602, 1733
Tsp45I	GTSAC	4 cut(s)	184, 829, 1531, 2013
TspGWI	ACGGA	2 cut(s)	28, 1819
TspRI	CASTG	6 cut(s)	357, 1081, 1176, 1201, 1483, 1997
Tth111I	GACNNNGTC	2 cut(s)	508, 1916
VneI	GTGCAC	1 cut(s)	1378
VpaK11BI	GGWCC	6 cut(s)	55, 229, 430, 608, 1912, 2106
XapI	RAATTY	3 cut(s)	641, 940, 1931
XceI	RCATGY	5 cut(s)	349, 604, 1024, 1270, 1378
XhoI	CTCGAG	2 cut(s)	269, 911
XmnI	GAANNNNTTC	4 cut(s)	98, 204, 1692, 1931
XspI	CTAG	3 cut(s)	1200, 1343, 1427

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.