Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0009861

Physical Location & Seq

Genomic Coordinates Reverse (-)

63541718 .. 63545182

Gene Structure 3465 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G039590.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2148 bp

ATGGGGTGCGCGCAGTCGAGAATCGACAATGAGGAATCGGTGTCGAGATGCAAGGAGCGGAGGAACCTGATGAGAGAAGCGGTGGTGGCCAGAAACGCCTTCGCGGCCGGCCATTCCGGCTACGTCATGGCCTTGAAGAACACCGGCGCCGCCTTAAGCGATTACGGCCACGGAGAATCGCAGCAGACACAAGAAGAGCTACTCCTCCATCACGACCAGCGGCCACTGGACCCCACCGCAACCGAGCCACCTCCGCCTCCTCCTCCGCCGCTCGAACACCTCCCTCCGCCGCCGCCGCCTCTGCCTCCCACCCCGCCGATCGAGCGCGCCACCAGCCTGCCGACGATGCCGACGGAGGTCCTTAAAACGAGGATGCAGGGGGCTAGGTTGGCCGTTGCTGAAGAGGACGAGGACGTGGAAGAAGAGGACCATGAGGAAGAAAAAGGGTTTCGCCGGAGATCGAGAAAGCAAATGGGCGCCGCGGCTGCGACGGGGTCCTCATCGCCGCAGACGCCGGAGATGAAGGCGGTGCCGCCGCCGTTGCCGGAGTCCAAGGGTGCGGCTTGGGACTATTTCTTCATGGTGGATAACATGCCGGGGCATAGCTTGAGTGAGAATGAAGGTGAGGAGTTTGGTGAAGATGAGAATGTGGATGATTTGGGTGATGGGGATGAGCCCAAGACCCCGGAGAAAGCGAAGGAGATTCAGGTGAAGCCGGAATCGGAGATTCCGATTCCGGTGTCTCCAGTGACTCCGGCGACAATTGAGCATTCGAAGACAGCCCCATCGGATTTTCAGAGGATGGTGATGCCCGGTTTTACTTTGATGGAAATATTGAATCAGATTGATGATCATTTCTTAAAGGCCTCGGAGAGTGCTCAGGAGGTTTCCAAGATGCTTGAGGCCACTCGATTGCATTATCACTCGAATTTTGCTGATAATCGAGGACACATTGATCATTCTGCACGAGTCATGCGTGTTATTACATGGAATAAATCCTTCAGAGGCTTACCAAATGGTGATGGAGCAAAGGAGGAAGATTCAGATGATTATGAAACTCATGCCACTGTTTTGGATAAGTTGTTAGCATGGGAGAAGAAACTTTATGATGAAGTGAAGCAAGGGGAGCTTATGAAGGTTGAGTATCAGAGAAAGGTTGCTCTACTAAACAAGCAGAAAAAACGCAATGCTAGTGCTGAAACCTTGGAAAAAACGAAAGCAGCAGTAAGTCACTTGCATACAAGATATATTGTTGACATGCAGTCCATGGACTCTACAGTTTCAGAAGTGAATCAGATACGGGATGAGCAGCTGTACCCTAAACTTGTTTCTCTAGCTGACGCGATGGGAAAAATGTGGGAAAATATGCATGCGCGTCATGACAGCCAGCTGAAGATTGTTATGGACCTGAAAGCCCTTGACATTGCCCATACTCCGATGGAAACGACCAAGCACCACCATGAACGCACTGAACAGCTATTTAACGTTGTCCAACATTGGCATTCCGAATTTGAAAAGCTTGTGATTCATCAGAAACAATACATCCAAGCATTGAATAGCTGGTTGAAGTTGAATCTGATTCCTATTGAAAGCAGCTTAAAAGAGAAAATCTCTTCTCCGCCAAGAGTTCAGCGTCCCCCAATTCAACCTCTTCTCCATGCATGGCATGATTTTCTTGAAAAGCTTCCTGATGAACTTGCAAAATCTGCAACAGCATCCTTTGCGGCTGTGATAAAGACTATATTACTTCATCAGGAGGAAGAGATGAAGCTAAAGGAGCAATATGAGAATACAAGGAAGGACTACATGCGTAAAAATCAGGCATTTCAAGACTGGTGCCAGAAGTATATGCAGCGTAAGGGGCCTGGTGAAGCAGATCAGGAGAAAAGTGAAGATGCGAACCACAAGGATCCTATTGCAGAGAGGCAATTTGCAGTTGAGAGCTTGAAGAAGAAAATGGAAGAGGAAGCTGAAGCTCACCAGAGACATTGTATCCAGGTCAGAGAGAAGTCACTTGGGAGTCTCAAAACTCGATTGCCTGAGCTCTTCCGTGCAATGTCAGACTATGCTCACACATGTGCTGATGCTTACGGAAAACTTAGGTCCATCACAATGCCACAAGCTTCAAATGGTAACTCTCATGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF630 DUF632

Protein Analysis

715

Amino Acids

81.22

Weight (kDa)

5.75

Isoelectric Point (pI)

51.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF630	PF04783	1 - 59	9.7e-23	Protein of unknown function (DUF630)
DUF632	PF04782	275 - 579	2.9e-103	Protein of unknown function (DUF632)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009861)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G25590
fragaria_vesca	FvH4_2g36270
malus_domestica	MD08G1120200.v1.1 MD15G1099400.v1.1
prunus_persica	Prupe.1G454100_v2.0.a1
pyrus_communis	pycom15g09140
rosa_chinensis	RchiOBHm_Chr6g0305621
rosa_laevigata	RLG00000010872 RLG00000018217
rosa_multiflora	Rmu_co8402805.1_g000001 Rmu_co8491339.1_g000001 Rmu_sc0001809.1_g000015
rosa_roxburghii	Rroxscaffold_7G00162520
rosa_rugosa	Rorug06G0342200
rosa_samantha	Rh2AG452300 Rh4BG182200 Rh6AG454100 Rh6BG447400 Rh6CG467800 Rh6DG454400
rosa_wichuraiana	Rw6G039590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	4 cut(s)	146, 476, 529, 1836
AccBSI	CCGCTC	2 cut(s)	58, 271
AccII	CGCG	6 cut(s)	11, 104, 327, 482, 1343, 1375
AclI	AACGTT	1 cut(s)	1485
AclWI	GGATC	2 cut(s)	1904, 1917
AcoI	YGGCCR	6 cut(s)	87, 105, 109, 166, 221, 390
AcsI	RAATTY	2 cut(s)	928, 1508
AcuI	CTGAAG	4 cut(s)	420, 985, 1412, 1992
AcyI	GRCGYC	3 cut(s)	147, 477, 512
AfaI	GTAC	1 cut(s)	1316
AflII	CTTAAG	1 cut(s)	154
AflIII	ACRYGT	1 cut(s)	2075
AhdI	GACNNNNNGTC	1 cut(s)	1261
AjiI	CACGTC	1 cut(s)	415
AjnI	CCWGG	2 cut(s)	1864, 1995
AleI	CACNNNNGTG	1 cut(s)	2076
Alw21I	GWGCWC	2 cut(s)	880, 2046
Alw26I	GTCTC	3 cut(s)	747, 1978, 2027
AlwI	GGATC	2 cut(s)	1904, 1917
ApeKI	GCWGC	6 cut(s)	181, 485, 1220, 1309, 1593, 1852
ApoI	RAATTY	2 cut(s)	928, 1508
Asp700I	GAANNNNTTC	1 cut(s)	1683
AspLEI	GCGC	7 cut(s)	11, 13, 149, 327, 329, 479, 1375
AspS9I	GGNCC	7 cut(s)	229, 358, 427, 495, 1405, 1862, 2103
AsuC2I	CCSGG	3 cut(s)	597, 686, 813
AsuHPI	GGTGA	8 cut(s)	635, 647, 674, 721, 817, 1031, 1880, 1970
AsuII	TTCGAA	1 cut(s)	773
AvaII	GGWCC	6 cut(s)	229, 358, 427, 495, 1405, 2103
BalI	TGGCCA	1 cut(s)	89
BamHI	GGATCC	1 cut(s)	1909
BanI	GGYRCC	4 cut(s)	146, 476, 529, 1836
BanII	GRGCYC	2 cut(s)	678, 2046
BauI	CACGAG	1 cut(s)	966
BbsI	GAAGAC	1 cut(s)	782
Bbv12I	GWGCWC	2 cut(s)	880, 2046
BbvI	GCAGC	6 cut(s)	193, 472, 1232, 1321, 1605, 1864
BccI	CCATC	9 cut(s)	216, 659, 793, 796, 820, 1016, 1339, 1432, 2114
BceAI	ACGGC	3 cut(s)	181, 377, 523
BciT130I	CCWGG	2 cut(s)	1866, 1997
BciVI	GTATCC	1 cut(s)	2003
BclI	TGATCA	2 cut(s)	850, 955
BcnI	CCSGG	3 cut(s)	597, 686, 813
BcoDI	GTCTC	3 cut(s)	747, 1978, 2027
BfaI	CTAG	3 cut(s)	384, 1191, 1334
BfmI	CTRYAG	1 cut(s)	1275
BfoI	RGCGCY	2 cut(s)	150, 480
BfrI	CTTAAG	1 cut(s)	154
BfuI	GTATCC	1 cut(s)	2003
BglI	GCCNNNNNGGC	2 cut(s)	104, 117
Bme1390I	CCNGG	5 cut(s)	597, 686, 813, 1866, 1997
Bme18I	GGWCC	6 cut(s)	229, 358, 427, 495, 1405, 2103
BmeRI	GACNNNNNGTC	1 cut(s)	1261
BmgBI	CACGTC	1 cut(s)	415
BmgT120I	GGNCC	7 cut(s)	229, 358, 427, 495, 1405, 1862, 2103
BmiI	GGNNCC	9 cut(s)	65, 148, 231, 478, 496, 531, 1838, 1863, 1911
BmrFI	CCNGG	5 cut(s)	597, 686, 813, 1866, 1997
BmsI	GCATC	8 cut(s)	38, 336, 363, 798, 885, 1724, 1885, 2074
BoxI	GACNNNNGTC	1 cut(s)	356
BpiI	GAAGAC	1 cut(s)	782
BplI	GAGNNNNNCTC	2 cut(s)	1595, 1627
BpmI	CTGGAG	1 cut(s)	729
Bpu10I	CCTNAGC	2 cut(s)	879, 2040
Bpu14I	TTCGAA	1 cut(s)	773
BpuEI	CTTGAG	2 cut(s)	628, 920
BpuMI	CCSGG	3 cut(s)	597, 686, 813
BsaHI	GRCGYC	3 cut(s)	147, 477, 512
BsaJI	CCNNGG	8 cut(s)	169, 480, 552, 596, 684, 867, 1203, 1266
BsaWI	WCCGGW	1 cut(s)	736
BsaXI	ACNNNNNCTCC	2 cut(s)	1638, 1668
Bse118I	RCCGGY	2 cut(s)	107, 143
Bse1I	ACTGG	3 cut(s)	231, 746, 1838
Bse3DI	GCAATG	3 cut(s)	1192, 1422, 2061
BseBI	CCWGG	2 cut(s)	1866, 1997
BseDI	CCNNGG	8 cut(s)	169, 480, 552, 596, 684, 867, 1203, 1266
BseGI	GGATG	7 cut(s)	378, 658, 676, 807, 1309, 1542, 1715
BseMI	GCAATG	3 cut(s)	1192, 1422, 2061
BseMII	CTCAG	2 cut(s)	893, 2031
BseNI	ACTGG	3 cut(s)	231, 746, 1838
BsePI	GCGCGC	2 cut(s)	9, 325
BseRI	GAGGAG	4 cut(s)	194, 249, 252, 641
BseX3I	CGGCCG	1 cut(s)	105
BseXI	GCAGC	6 cut(s)	193, 472, 1232, 1321, 1605, 1864
BsgI	GTGCAG	1 cut(s)	948
Bsh1236I	CGCG	6 cut(s)	11, 104, 327, 482, 1343, 1375
Bsh1285I	CGRYCG	2 cut(s)	108, 321
BshNI	GGYRCC	4 cut(s)	146, 476, 529, 1836
BsiEI	CGRYCG	2 cut(s)	108, 321
BsiHKAI	GWGCWC	2 cut(s)	880, 2046
BslFI	GGGAC	2 cut(s)	581, 1620
BsmAI	GTCTC	3 cut(s)	747, 1978, 2027
BsmFI	GGGAC	2 cut(s)	581, 1620
BsmI	GAATGC	2 cut(s)	769, 1501
Bsp119I	TTCGAA	1 cut(s)	773
Bsp1286I	GDGCHC	3 cut(s)	678, 880, 2046
Bsp143I	GATC	6 cut(s)	318, 458, 850, 955, 1876, 1909
Bsp19I	CCATGG	1 cut(s)	1266
BspCNI	CTCAG	2 cut(s)	892, 2032
BspFNI	CGCG	6 cut(s)	11, 104, 327, 482, 1343, 1375
BspHI	TCATGA	1 cut(s)	1378
BspLI	GGNNCC	9 cut(s)	65, 148, 231, 478, 496, 531, 1838, 1863, 1911
BspPI	GGATC	2 cut(s)	1904, 1917
BspQI	GCTCTTC	2 cut(s)	189, 2051
BspT104I	TTCGAA	1 cut(s)	773
BspT107I	GGYRCC	4 cut(s)	146, 476, 529, 1836
BspTI	CTTAAG	1 cut(s)	154
BsrBI	CCGCTC	2 cut(s)	58, 271
BsrDI	GCAATG	3 cut(s)	1192, 1422, 2061
BsrFI	RCCGGY	2 cut(s)	107, 143
BsrI	ACTGG	3 cut(s)	231, 746, 1838
BssAI	RCCGGY	2 cut(s)	107, 143
BssECI	CCNNGG	8 cut(s)	169, 480, 552, 596, 684, 867, 1203, 1266
BssHII	GCGCGC	2 cut(s)	9, 325
BssMI	GATC	6 cut(s)	318, 458, 850, 955, 1876, 1909
BssNI	GRCGYC	3 cut(s)	147, 477, 512
BssSI	CACGAG	1 cut(s)	966
BssT1I	CCWWGG	3 cut(s)	552, 1203, 1266
Bst2BI	CACGAG	1 cut(s)	966
Bst2UI	CCWGG	2 cut(s)	1866, 1997
Bst4CI	ACNGT	2 cut(s)	1069, 1279
Bst6I	CTCTTC	8 cut(s)	189, 396, 417, 1618, 1656, 1755, 1956, 2051
BstACI	GRCGYC	3 cut(s)	147, 477, 512
BstAFI	CTTAAG	1 cut(s)	154
BstAPI	GCANNNNNTGC	2 cut(s)	1706, 1721
BstBI	TTCGAA	1 cut(s)	773
BstC8I	GCNNGC	6 cut(s)	11, 109, 327, 338, 1371, 1388
BstDEI	CTNAG	3 cut(s)	879, 2040, 2099
BstDSI	CCRYGG	3 cut(s)	169, 480, 1266
BstF5I	GGATG	7 cut(s)	378, 658, 676, 807, 1309, 1542, 1715
BstFNI	CGCG	6 cut(s)	11, 104, 327, 482, 1343, 1375
BstH2I	RGCGCY	2 cut(s)	150, 480
BstHHI	GCGC	7 cut(s)	11, 13, 149, 327, 329, 479, 1375
BstKTI	GATC	6 cut(s)	321, 461, 853, 958, 1879, 1912
BstMAI	GTCTC	3 cut(s)	747, 1978, 2027
BstMBI	GATC	6 cut(s)	318, 458, 850, 955, 1876, 1909
BstMCI	CGRYCG	2 cut(s)	108, 321
BstNI	CCWGG	2 cut(s)	1866, 1997
BstNSI	RCATGY	5 cut(s)	595, 1261, 1373, 1810, 2079
BstPAI	GACNNNNGTC	1 cut(s)	356
BstSCI	CCNGG	5 cut(s)	595, 684, 811, 1864, 1995
BstSFI	CTRYAG	1 cut(s)	1275
BstUI	CGCG	6 cut(s)	11, 104, 327, 482, 1343, 1375
BstV1I	GCAGC	6 cut(s)	193, 472, 1232, 1321, 1605, 1864
BstV2I	GAAGAC	1 cut(s)	782
BstX2I	RGATCY	1 cut(s)	1909
BstXI	CCANNNNNNTGG	1 cut(s)	1072
BstYI	RGATCY	1 cut(s)	1909
BstZI	CGGCCG	1 cut(s)	105
BsuI	GTATCC	1 cut(s)	2003
BtgI	CCRYGG	3 cut(s)	169, 480, 1266
BtgZI	GCGATG	2 cut(s)	486, 1358
BtrI	CACGTC	1 cut(s)	415
BtsCI	GGATG	7 cut(s)	378, 658, 676, 807, 1309, 1542, 1715
BtsIMutI	CAGTG	4 cut(s)	224, 753, 1065, 1467
Cac8I	GCNNGC	6 cut(s)	11, 109, 327, 338, 1371, 1388
CciI	TCATGA	1 cut(s)	1378
CfoI	GCGC	7 cut(s)	11, 13, 149, 327, 329, 479, 1375
Cfr10I	RCCGGY	2 cut(s)	107, 143
Cfr13I	GGNCC	7 cut(s)	229, 358, 427, 495, 1405, 1862, 2103
Cfr42I	CCGCGG	1 cut(s)	483
CseI	GACGC	4 cut(s)	520, 1349, 1364, 1622
Csp6I	GTAC	1 cut(s)	1315
CviQI	GTAC	1 cut(s)	1315
DdeI	CTNAG	3 cut(s)	879, 2040, 2099
DinI	GGCGCC	2 cut(s)	148, 478
DpnI	GATC	6 cut(s)	320, 460, 852, 957, 1878, 1911
DpnII	GATC	6 cut(s)	318, 458, 850, 955, 1876, 1909
DriI	GACNNNNNGTC	1 cut(s)	1261
EaeI	YGGCCR	6 cut(s)	87, 105, 109, 166, 221, 390
EagI	CGGCCG	1 cut(s)	105
Eam1104I	CTCTTC	8 cut(s)	189, 396, 417, 1618, 1656, 1755, 1956, 2051
Eam1105I	GACNNNNNGTC	1 cut(s)	1261
EarI	CTCTTC	8 cut(s)	189, 396, 417, 1618, 1656, 1755, 1956, 2051
EciI	GGCGGA	4 cut(s)	243, 255, 276, 1608
Ecl136II	GAGCTC	1 cut(s)	2044
EclXI	CGGCCG	1 cut(s)	105
Eco130I	CCWWGG	3 cut(s)	552, 1203, 1266
Eco147I	AGGCCT	1 cut(s)	866
Eco24I	GRGCYC	2 cut(s)	678, 2046
Eco47I	GGWCC	6 cut(s)	229, 358, 427, 495, 1405, 2103
Eco52I	CGGCCG	1 cut(s)	105
Eco53kI	GAGCTC	1 cut(s)	2044
Eco57I	CTGAAG	4 cut(s)	420, 985, 1412, 1992
EcoICRI	GAGCTC	1 cut(s)	2044
EcoO109I	RGGNCCY	3 cut(s)	358, 495, 1862
EcoRII	CCWGG	2 cut(s)	1864, 1995
EcoT14I	CCWWGG	3 cut(s)	552, 1203, 1266
EcoT22I	ATGCAT	2 cut(s)	1371, 1663
EcoT38I	GRGCYC	2 cut(s)	678, 2046
EgeI	GGCGCC	2 cut(s)	148, 478
EheI	GGCGCC	2 cut(s)	148, 478
ErhI	CCWWGG	3 cut(s)	552, 1203, 1266
FalI	AAGNNNNNCTT	2 cut(s)	1113, 1145
FaqI	GGGAC	2 cut(s)	581, 1620
FauI	CCCGC	1 cut(s)	321
FbaI	TGATCA	2 cut(s)	850, 955
FokI	GGATG	7 cut(s)	385, 665, 683, 814, 1316, 1529, 1702
FriOI	GRGCYC	2 cut(s)	678, 2046
FseI	GGCCGGCC	1 cut(s)	111
FspBI	CTAG	3 cut(s)	384, 1191, 1334
GlaI	GCGC	7 cut(s)	10, 12, 148, 326, 328, 478, 1374
GsuI	CTGGAG	1 cut(s)	729
HaeII	RGCGCY	2 cut(s)	150, 480
HgaI	GACGC	4 cut(s)	520, 1349, 1364, 1622
HhaI	GCGC	7 cut(s)	11, 13, 149, 327, 329, 479, 1375
Hin1I	GRCGYC	3 cut(s)	147, 477, 512
Hin6I	GCGC	7 cut(s)	9, 11, 147, 325, 327, 477, 1373
HinP1I	GCGC	7 cut(s)	9, 11, 147, 325, 327, 477, 1373
HincII	GTYRAC	1 cut(s)	1255
HindII	GTYRAC	1 cut(s)	1255
HindIII	AAGCTT	3 cut(s)	1517, 1682, 2121
HphI	GGTGA	8 cut(s)	635, 647, 674, 721, 817, 1031, 1880, 1970
Hpy166II	GTNNAC	1 cut(s)	1255
Hpy8I	GTNNAC	1 cut(s)	1255
Hpy99I	CGWCG	3 cut(s)	346, 355, 493
HpyAV	CCTTC	7 cut(s)	109, 517, 614, 691, 1009, 1129, 1792
HpyCH4III	ACNGT	2 cut(s)	1069, 1279
HpyCH4IV	ACGT	3 cut(s)	123, 414, 1485
HpyF3I	CTNAG	3 cut(s)	879, 2040, 2099
HpySE526I	ACGT	3 cut(s)	123, 414, 1485
Hsp92I	GRCGYC	3 cut(s)	147, 477, 512
HspAI	GCGC	7 cut(s)	9, 11, 147, 325, 327, 477, 1373
KasI	GGCGCC	2 cut(s)	146, 476
KroI	GCCGGC	1 cut(s)	107
KroNI	GCCGGC	1 cut(s)	109
Ksp22I	TGATCA	2 cut(s)	850, 955
KspI	CCGCGG	1 cut(s)	483
Kzo9I	GATC	6 cut(s)	318, 458, 850, 955, 1876, 1909
LguI	GCTCTTC	2 cut(s)	189, 2051
LmnI	GCTCC	4 cut(s)	55, 1025, 1126, 1777
Lsp1109I	GCAGC	6 cut(s)	193, 472, 1232, 1321, 1605, 1864
LweI	GCATC	8 cut(s)	38, 336, 363, 798, 885, 1724, 1885, 2074
MaeI	CTAG	3 cut(s)	384, 1191, 1334
MaeII	ACGT	3 cut(s)	123, 414, 1485
MaeIII	GTNAC	4 cut(s)	748, 1229, 2010, 2132
MalI	GATC	6 cut(s)	320, 460, 852, 957, 1878, 1911
MbiI	CCGCTC	2 cut(s)	58, 271
MboI	GATC	6 cut(s)	318, 458, 850, 955, 1876, 1909
MfeI	CAATTG	1 cut(s)	762
MflI	RGATCY	1 cut(s)	1909
MhlI	GDGCHC	3 cut(s)	678, 880, 2046
MlsI	TGGCCA	1 cut(s)	89
MluCI	AATT	5 cut(s)	762, 928, 1508, 1641, 1928
MluNI	TGGCCA	1 cut(s)	89
Mly113I	GGCGCC	2 cut(s)	147, 477
MlyI	GAGTC	5 cut(s)	557, 745, 978, 1265, 2029
MmeI	TCCRAC	1 cut(s)	1516
Mox20I	TGGCCA	1 cut(s)	89
Mph1103I	ATGCAT	2 cut(s)	1371, 1663
MroNI	GCCGGC	1 cut(s)	107
MroXI	GAANNNNTTC	1 cut(s)	1683
MscI	TGGCCA	1 cut(s)	89
MseI	TTAA	5 cut(s)	155, 363, 860, 1482, 1598
MslI	CAYNNNNRTG	3 cut(s)	1458, 2076, 2111
Msp20I	TGGCCA	1 cut(s)	89
MspA1I	CMGCKG	4 cut(s)	220, 482, 1312, 1390
MspCI	CTTAAG	1 cut(s)	154
MspR9I	CCNGG	5 cut(s)	597, 686, 813, 1866, 1997
MunI	CAATTG	1 cut(s)	762
Mva1269I	GAATGC	2 cut(s)	769, 1501
MvaI	CCWGG	2 cut(s)	1866, 1997
MvnI	CGCG	6 cut(s)	11, 104, 327, 482, 1343, 1375
NaeI	GCCGGC	1 cut(s)	109
NarI	GGCGCC	2 cut(s)	147, 477
NciI	CCSGG	3 cut(s)	597, 686, 813
NcoI	CCATGG	1 cut(s)	1266
NdeII	GATC	6 cut(s)	318, 458, 850, 955, 1876, 1909
NgoMIV	GCCGGC	1 cut(s)	107
NlaIV	GGNNCC	9 cut(s)	65, 148, 231, 478, 496, 531, 1838, 1863, 1911
NmuCI	GTSAC	3 cut(s)	748, 1229, 2010
NsiI	ATGCAT	2 cut(s)	1371, 1663
NspI	RCATGY	5 cut(s)	595, 1261, 1373, 1810, 2079
NspV	TTCGAA	1 cut(s)	773
OliI	CACNNNNGTG	1 cut(s)	2076
PaeI	GCATGC	1 cut(s)	1373
PagI	TCATGA	1 cut(s)	1378
PauI	GCGCGC	2 cut(s)	9, 325
PceI	AGGCCT	1 cut(s)	866
PciI	ACATGT	1 cut(s)	2075
PciSI	GCTCTTC	2 cut(s)	189, 2051
PcsI	WCGNNNNNNNCGW	2 cut(s)	728, 973
PctI	GAATGC	2 cut(s)	769, 1501
PdiI	GCCGGC	1 cut(s)	109
PdmI	GAANNNNTTC	1 cut(s)	1683
PflFI	GACNNNGTC	1 cut(s)	493
Ple19I	CGATCG	1 cut(s)	321
PleI	GAGTC	5 cut(s)	556, 745, 977, 1265, 2028
PluTI	GGCGCC	2 cut(s)	150, 480
PpsI	GAGTC	5 cut(s)	556, 745, 977, 1265, 2028
PpuMI	RGGWCCY	2 cut(s)	358, 495
PscI	ACATGT	1 cut(s)	2075
PshAI	GACNNNNGTC	1 cut(s)	356
Psp124BI	GAGCTC	1 cut(s)	2046
Psp1406I	AACGTT	1 cut(s)	1485
Psp5II	RGGWCCY	2 cut(s)	358, 495
Psp6I	CCWGG	2 cut(s)	1864, 1995
PspGI	CCWGG	2 cut(s)	1864, 1995
PspN4I	GGNNCC	9 cut(s)	65, 148, 231, 478, 496, 531, 1838, 1863, 1911
PspPI	GGNCC	7 cut(s)	229, 358, 427, 495, 1405, 1862, 2103
PspPPI	RGGWCCY	2 cut(s)	358, 495
PsuI	RGATCY	1 cut(s)	1909
PsyI	GACNNNGTC	1 cut(s)	493
PteI	GCGCGC	2 cut(s)	9, 325
PvuI	CGATCG	1 cut(s)	321
PvuII	CAGCTG	2 cut(s)	1312, 1390
RigI	GGCCGGCC	1 cut(s)	111
RsaI	GTAC	1 cut(s)	1316
RsaNI	GTAC	1 cut(s)	1315
RseI	CAYNNNNRTG	3 cut(s)	1458, 2076, 2111
SacI	GAGCTC	1 cut(s)	2046
SacII	CCGCGG	1 cut(s)	483
SapI	GCTCTTC	2 cut(s)	189, 2051
SaqAI	TTAA	5 cut(s)	155, 363, 860, 1482, 1598
Sau3AI	GATC	6 cut(s)	318, 458, 850, 955, 1876, 1909
Sau96I	GGNCC	7 cut(s)	229, 358, 427, 495, 1405, 1862, 2103
SchI	GAGTC	5 cut(s)	557, 745, 978, 1265, 2029
ScrFI	CCNGG	5 cut(s)	597, 686, 813, 1866, 1997
SduI	GDGCHC	3 cut(s)	678, 880, 2046
SfaNI	GCATC	8 cut(s)	38, 336, 363, 798, 885, 1724, 1885, 2074
SfcI	CTRYAG	1 cut(s)	1275
SfoI	GGCGCC	2 cut(s)	148, 478
Sfr303I	CCGCGG	1 cut(s)	483
SfuI	TTCGAA	1 cut(s)	773
SgrAI	CRCCGGYG	1 cut(s)	143
SgrBI	CCGCGG	1 cut(s)	483
SinI	GGWCC	6 cut(s)	229, 358, 427, 495, 1405, 2103
SmiMI	CAYNNNNRTG	3 cut(s)	1458, 2076, 2111
SmlI	CTYRAG	3 cut(s)	154, 607, 899
SmoI	CTYRAG	3 cut(s)	154, 607, 899
SphI	GCATGC	1 cut(s)	1373
Sse9I	AATT	5 cut(s)	762, 928, 1508, 1641, 1928
SseBI	AGGCCT	1 cut(s)	866
SspDI	GGCGCC	2 cut(s)	146, 476
SspI	AATATT	1 cut(s)	834
SspMI	CTAG	3 cut(s)	384, 1191, 1334
SstI	GAGCTC	1 cut(s)	2046
StuI	AGGCCT	1 cut(s)	866
StyD4I	CCNGG	5 cut(s)	595, 684, 811, 1864, 1995
StyI	CCWWGG	3 cut(s)	552, 1203, 1266
TaaI	ACNGT	2 cut(s)	1069, 1279
TaiI	ACGT	3 cut(s)	126, 417, 1488
TasI	AATT	5 cut(s)	762, 928, 1508, 1641, 1928
Tru1I	TTAA	5 cut(s)	155, 363, 860, 1482, 1598
Tru9I	TTAA	5 cut(s)	155, 363, 860, 1482, 1598
TscAI	CASTG	4 cut(s)	231, 753, 1072, 1474
TseFI	GTSAC	3 cut(s)	748, 1229, 2010
TseI	GCWGC	6 cut(s)	181, 485, 1220, 1309, 1593, 1852
Tsp45I	GTSAC	3 cut(s)	748, 1229, 2010
TspGWI	ACGGA	4 cut(s)	186, 368, 2039, 2106
TspRI	CASTG	4 cut(s)	231, 753, 1072, 1474
Tth111I	GACNNNGTC	1 cut(s)	493
Vha464I	CTTAAG	1 cut(s)	154
VpaK11BI	GGWCC	6 cut(s)	229, 358, 427, 495, 1405, 2103
XapI	RAATTY	2 cut(s)	928, 1508
XceI	RCATGY	5 cut(s)	595, 1261, 1373, 1810, 2079
XmnI	GAANNNNTTC	1 cut(s)	1683
XspI	CTAG	3 cut(s)	384, 1191, 1334
Zsp2I	ATGCAT	2 cut(s)	1371, 1663

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.