Rroxscaffold_7G00162520

Protein of unknown function (DUF632)

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Forward (+)
5004716 .. 5008839
4124 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00162520.1

Sequence Viewer

Length: 2157 bp
ATGGGGTGCGCGCAATCGAGAATCGACAATGAGGAATCGGTGTCGAGATGCAAGGAGCGGAGGAACCTGATGAGAGAAGCGGTGGTGGCCAGAAACGCCTTCGCGGCCGGCCATTCCGGCTACGTCATGGCCTTGAAGAACACCGGCGCTGCCCTAAGCGATTACGGCCACGGAGAATCGCAGCAGACACAAGAAGAGCTACTCCTCCATCACGACCAGCGGCCACTGGACTCCACCGCAACTCAGCCACCGCCGCCTCCTCCTCCGCCGCTCGAACACCTCCCTCCGCCGCCGCCGCCTCTGCCGACCTTCACCCCCAGCCCCCCGATCAAGCGCGCCACCAGCCTGCCGACGATGCCGACGGAGGTCCGGAAAACGAGGATGCAGGGGCCTAGGTTGCCCATTGCTGAAGAGGACGAGGACGAGGAAGAAGAGGACCATGAGGAAGAAAAAGGGTTTCGCCGGAGATCGAGAATGGAAATGGGCGCGGCTGCGGCTGCGGCTGCGGCGGCGGCGGGGTCCTCATCGCCGCAGACGCCGGAGATGAAGGCGGTGCCGCCGCCGATGCCGGAGTCCAAGGGTGCTTGGGACTATTTCTTCATGGTGGATAGCATGCCGGGGCATAGCTTGAGTGAGAATGAAGGTGAAGAGTTTGGTGAAGATAAGAATGTGGAGGATTTGGGTGATGGGGATGGGGATGAGCCCAAGACCCCGGAGAAAGCGGAGGAGATTCAGGTGAAGACGGAGGAGATTCCGGTGTCTCCAGTGACTCCGGCGACAATTGAGCATTCGAATACAGCCCCACCGGATTTTCAGAGGATAGTGATGCCCGGTTTTACTTTGATGGAAATATTGAATCAGATTGATGATCATTTCTTAAAGGCCTCGGAGAGTGCTCAGGAGGTTTCCAAGATGCTCGAGGCCACTCGATTGCATTATCACTCGAATTTTGCTGATAATCGAGGACACATTGATCATTCTGCACGAGTCATGCGTGTTATTACATGGAATAAATCCTTCAGAGGCTTACCAAATGGTGATGGAGCAAAGGAGGAAGATTCAGATGATTATGAAACTCATGCCACTGTTTTGGATAAGTTGTTAGCATGGGAGAAGAAACTTTATGATGAAGTGAAGCAAGGGGAGCTTATGAAGGTTGAGTATCAGAGAAAGGTTGCTCTACTAAACAAGCAGAAAAAACGCAATGCTAGTGCTGAAACCTTGGAAAAAACGAAAGCAGCAGTAAGTCACTTGCATACAAGATATATTGTTGACATGCAGTCCATGGACTCTACAGTTTCAGAAGTGAATCAGATACGGGATGAGCAGCTGTACCCTAAACTTGTTTCTCTAGCTGACGCGATGGGAAAAATGTGGGAAAATATGCATGCGCGTCATGACAGCCAGCTGAAGATTGTTATGGACCTGAAAGTCCTTGACATTGCCCATACTCCGATGGAAACGACCAAGCACCACCATGAACGCACTGAACAGCTATTTAACGTTGTCCAACATTGGCATTCCGAATTTGAAAAGCTTGTGATTCATCAGAAACAATACATCCAAGCATTGAATAGCTGGTTGAAGTTGAATCTGATTCCTATTGAAAGCAGCTTAAAAGAGAAAATCTCTTCTCCGCCAAGAGTTCAGCGTCCCCCAATTCAACCGCTTCTCCATGCATGGCATGATTTTCTTGAAAAGCTTCCTGATGAACTTGCAAAATCTGCAACAGCGTCCTTTGCGGCTGTGATAAAGACTATATTACTTCATCAGGAGGAAGAGATGAAGCTAAAGGAGCAATATGAGAATACAAGGAAGGATTACATGCGTAAAAATCAGGCATTTCAAGACTGGTACCAGAAGCGTAAAGGGCCCAGTGAAGCAGATCAGGAGAAAAGTGAAGATGCGAACCACAAGGATCCTATTGCAGAGAGGCTATTTGCAGTTGAGAGCTTGAAGAAGAAAATGGAAGAGGAAGCTGAAGCTCACCAGAGACATTGTATCCAGGTCAGAGAGAAGTCACTCGGGAGTCTCAAAACTCGATTGCCTGAGCTCTTCCGTGCAATGTCAGACTATGCTCACACATGTGCTGATGCTTACGGAAAACTTAGGTCCATCACAATGCCACAAGCTTCAAATGGTAACTCTCATGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

718

Amino Acids

81.48

Weight (kDa)

5.72

Isoelectric Point (pI)

53.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF630 PF04783 1 - 59 9.7e-23 Protein of unknown function (DUF630)
DUF632 PF04782 281 - 585 3.8e-103 Protein of unknown function (DUF632)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1430
Acc65I GGTACC 1 cut(s) 1854
AccB1I GGYRCC 2 cut(s) 553, 1854
AccBSI CCGCTC 2 cut(s) 58, 271
AccII CGCG 6 cut(s) 11, 104, 336, 488, 1361, 1393
AccIII TCCGGA 1 cut(s) 369
AclI AACGTT 1 cut(s) 1503
AclWI GGATC 2 cut(s) 1913, 1926
AcoI YGGCCR 5 cut(s) 87, 105, 109, 166, 221
AcsI RAATTY 2 cut(s) 946, 1526
AcuI CTGAAG 4 cut(s) 429, 1003, 1430, 2001
AcyI GRCGYC 1 cut(s) 536
AfaI GTAC 2 cut(s) 1334, 1856
AflIII ACRYGT 1 cut(s) 2084
AhdI GACNNNNNGTC 1 cut(s) 1279
AjnI CCWGG 1 cut(s) 2004
AleI CACNNNNGTG 1 cut(s) 2085
Alw21I GWGCWC 2 cut(s) 898, 2055
Alw26I GTCTC 3 cut(s) 765, 1987, 2036
AlwI GGATC 2 cut(s) 1913, 1926
Ama87I CYCGRG 2 cut(s) 917, 2024
Aor13HI TCCGGA 1 cut(s) 369
ApaI GGGCCC 1 cut(s) 1875
ApeKI GCWGC 8 cut(s) 149, 181, 491, 497, 503, 1238, 1327, 1611
ApoI RAATTY 2 cut(s) 946, 1526
Asp700I GAANNNNTTC 1 cut(s) 1701
Asp718I GGTACC 1 cut(s) 1854
AspA2I CCTAGG 1 cut(s) 392
AspLEI GCGC 7 cut(s) 11, 13, 149, 336, 338, 488, 1393
AspS9I GGNCC 8 cut(s) 367, 389, 436, 519, 1423, 1871, 1872, 2112
AsuC2I CCSGG 3 cut(s) 618, 713, 831
AsuHPI GGTGA 7 cut(s) 304, 656, 668, 695, 748, 1049, 1979
AsuII TTCGAA 1 cut(s) 791
AvaI CYCGRG 2 cut(s) 917, 2024
AvaII GGWCC 5 cut(s) 367, 436, 519, 1423, 2112
AvrII CCTAGG 1 cut(s) 392
BaeGI GKGCMC 1 cut(s) 1875
BalI TGGCCA 1 cut(s) 89
BamHI GGATCC 1 cut(s) 1918
BanI GGYRCC 2 cut(s) 553, 1854
BanII GRGCYC 3 cut(s) 705, 1875, 2055
BauI CACGAG 1 cut(s) 984
BbsI GAAGAC 1 cut(s) 746
Bbv12I GWGCWC 2 cut(s) 898, 2055
BbvI GCAGC 8 cut(s) 136, 193, 478, 484, 490, 1250, 1339, 1623
BccI CCATC 8 cut(s) 216, 680, 686, 838, 1034, 1357, 1450, 2123
BceAI ACGGC 1 cut(s) 181
BciT130I CCWGG 1 cut(s) 2006
BciVI GTATCC 1 cut(s) 2012
BclI TGATCA 2 cut(s) 868, 973
BcnI CCSGG 3 cut(s) 618, 713, 831
BcoDI GTCTC 3 cut(s) 765, 1987, 2036
BfaI CTAG 3 cut(s) 393, 1209, 1352
BfmI CTRYAG 1 cut(s) 1293
BfoI RGCGCY 1 cut(s) 150
BfuI GTATCC 1 cut(s) 2012
BglI GCCNNNNNGGC 2 cut(s) 104, 117
BlnI CCTAGG 1 cut(s) 392
Bme1390I CCNGG 4 cut(s) 618, 713, 831, 2006
Bme18I GGWCC 5 cut(s) 367, 436, 519, 1423, 2112
BmeRI GACNNNNNGTC 1 cut(s) 1279
BmeT110I CYCGRG 2 cut(s) 917, 2024
BmgT120I GGNCC 8 cut(s) 367, 389, 436, 519, 1423, 1871, 1872, 2112
BmiI GGNNCC 7 cut(s) 65, 390, 520, 555, 1856, 1873, 1920
BmrFI CCNGG 4 cut(s) 618, 713, 831, 2006
BmrI ACTGGG 1 cut(s) 1869
BmsI GCATC 8 cut(s) 38, 345, 372, 555, 816, 903, 1894, 2083
BmuI ACTGGG 1 cut(s) 1869
BoxI GACNNNNGTC 1 cut(s) 365
BpiI GAAGAC 1 cut(s) 746
BplI GAGNNNNNCTC 2 cut(s) 1613, 1645
BpmI CTGGAG 1 cut(s) 747
Bpu10I CCTNAGC 3 cut(s) 155, 897, 2049
Bpu14I TTCGAA 1 cut(s) 791
BpuEI CTTGAG 1 cut(s) 649
BpuMI CCSGG 3 cut(s) 618, 713, 831
BsaHI GRCGYC 1 cut(s) 536
BsaJI CCNNGG 8 cut(s) 169, 392, 576, 617, 711, 885, 1221, 1284
BsaWI WCCGGW 3 cut(s) 369, 754, 805
BsaXI ACNNNNNCTCC 2 cut(s) 1656, 1686
Bse118I RCCGGY 2 cut(s) 107, 143
Bse1I ACTGG 4 cut(s) 231, 764, 1856, 1875
Bse3DI GCAATG 4 cut(s) 402, 1210, 1440, 2070
BseAI TCCGGA 1 cut(s) 369
BseBI CCWGG 1 cut(s) 2006
BseDI CCNNGG 8 cut(s) 169, 392, 576, 617, 711, 885, 1221, 1284
BseGI GGATG 5 cut(s) 387, 697, 703, 1327, 1560
BseMI GCAATG 4 cut(s) 402, 1210, 1440, 2070
BseMII CTCAG 3 cut(s) 257, 911, 2040
BseNI ACTGG 4 cut(s) 231, 764, 1856, 1875
BsePI GCGCGC 2 cut(s) 9, 334
BseRI GAGGAG 5 cut(s) 194, 249, 252, 740, 761
BseSI GKGCMC 1 cut(s) 1875
BseX3I CGGCCG 1 cut(s) 105
BseXI GCAGC 8 cut(s) 136, 193, 478, 484, 490, 1250, 1339, 1623
BseYI CCCAGC 1 cut(s) 317
BsgI GTGCAG 1 cut(s) 966
Bsh1236I CGCG 6 cut(s) 11, 104, 336, 488, 1361, 1393
Bsh1285I CGRYCG 1 cut(s) 108
BshNI GGYRCC 2 cut(s) 553, 1854
BsiEI CGRYCG 1 cut(s) 108
BsiHKAI GWGCWC 2 cut(s) 898, 2055
BsiHKCI CYCGRG 2 cut(s) 917, 2024
BslFI GGGAC 2 cut(s) 602, 1638
BsmAI GTCTC 3 cut(s) 765, 1987, 2036
BsmFI GGGAC 2 cut(s) 602, 1638
BsmI GAATGC 2 cut(s) 787, 1519
BsoBI CYCGRG 2 cut(s) 917, 2024
Bsp119I TTCGAA 1 cut(s) 791
Bsp120I GGGCCC 1 cut(s) 1871
Bsp1286I GDGCHC 4 cut(s) 705, 898, 1875, 2055
Bsp13I TCCGGA 1 cut(s) 369
Bsp143I GATC 6 cut(s) 327, 467, 868, 973, 1885, 1918
Bsp19I CCATGG 1 cut(s) 1284
BspCNI CTCAG 3 cut(s) 256, 910, 2041
BspEI TCCGGA 1 cut(s) 369
BspFNI CGCG 6 cut(s) 11, 104, 336, 488, 1361, 1393
BspHI TCATGA 1 cut(s) 1396
BspLI GGNNCC 7 cut(s) 65, 390, 520, 555, 1856, 1873, 1920
BspPI GGATC 2 cut(s) 1913, 1926
BspQI GCTCTTC 2 cut(s) 189, 2060
BspT104I TTCGAA 1 cut(s) 791
BspT107I GGYRCC 2 cut(s) 553, 1854
BsrBI CCGCTC 2 cut(s) 58, 271
BsrDI GCAATG 4 cut(s) 402, 1210, 1440, 2070
BsrFI RCCGGY 2 cut(s) 107, 143
BsrI ACTGG 4 cut(s) 231, 764, 1856, 1875
BssAI RCCGGY 2 cut(s) 107, 143
BssECI CCNNGG 8 cut(s) 169, 392, 576, 617, 711, 885, 1221, 1284
BssHII GCGCGC 2 cut(s) 9, 334
BssMI GATC 6 cut(s) 327, 467, 868, 973, 1885, 1918
BssNI GRCGYC 1 cut(s) 536
BssSI CACGAG 1 cut(s) 984
BssT1I CCWWGG 4 cut(s) 392, 576, 1221, 1284
Bst2BI CACGAG 1 cut(s) 984
Bst2UI CCWGG 1 cut(s) 2006
Bst4CI ACNGT 2 cut(s) 1087, 1297
Bst6I CTCTTC 8 cut(s) 189, 405, 426, 642, 1636, 1773, 1965, 2060
BstACI GRCGYC 1 cut(s) 536
BstAPI GCANNNNNTGC 1 cut(s) 1724
BstBI TTCGAA 1 cut(s) 791
BstC8I GCNNGC 7 cut(s) 11, 109, 336, 347, 614, 1389, 1406
BstDEI CTNAG 5 cut(s) 155, 243, 897, 2049, 2108
BstDSI CCRYGG 2 cut(s) 169, 1284
BstF5I GGATG 5 cut(s) 387, 697, 703, 1327, 1560
BstFNI CGCG 6 cut(s) 11, 104, 336, 488, 1361, 1393
BstH2I RGCGCY 1 cut(s) 150
BstHHI GCGC 7 cut(s) 11, 13, 149, 336, 338, 488, 1393
BstKTI GATC 6 cut(s) 330, 470, 871, 976, 1888, 1921
BstMAI GTCTC 3 cut(s) 765, 1987, 2036
BstMBI GATC 6 cut(s) 327, 467, 868, 973, 1885, 1918
BstMCI CGRYCG 1 cut(s) 108
BstNI CCWGG 1 cut(s) 2006
BstNSI RCATGY 5 cut(s) 616, 1279, 1391, 1828, 2088
BstPAI GACNNNNGTC 1 cut(s) 365
BstSCI CCNGG 4 cut(s) 616, 711, 829, 2004
BstSFI CTRYAG 1 cut(s) 1293
BstSLI GKGCMC 1 cut(s) 1875
BstUI CGCG 6 cut(s) 11, 104, 336, 488, 1361, 1393
BstV1I GCAGC 8 cut(s) 136, 193, 478, 484, 490, 1250, 1339, 1623
BstV2I GAAGAC 1 cut(s) 746
BstX2I RGATCY 1 cut(s) 1918
BstXI CCANNNNNNTGG 1 cut(s) 1090
BstYI RGATCY 1 cut(s) 1918
BstZI CGGCCG 1 cut(s) 105
BsuI GTATCC 1 cut(s) 2012
BtgI CCRYGG 2 cut(s) 169, 1284
BtgZI GCGATG 2 cut(s) 510, 1376
BtsCI GGATG 5 cut(s) 387, 697, 703, 1327, 1560
BtsIMutI CAGTG 5 cut(s) 224, 771, 1083, 1485, 1882
Cac8I GCNNGC 7 cut(s) 11, 109, 336, 347, 614, 1389, 1406
CciI TCATGA 1 cut(s) 1396
CfoI GCGC 7 cut(s) 11, 13, 149, 336, 338, 488, 1393
Cfr10I RCCGGY 2 cut(s) 107, 143
Cfr13I GGNCC 8 cut(s) 367, 389, 436, 519, 1423, 1871, 1872, 2112
CseI GACGC 5 cut(s) 544, 1367, 1382, 1640, 1722
Csp6I GTAC 2 cut(s) 1333, 1855
CviQI GTAC 2 cut(s) 1333, 1855
DdeI CTNAG 5 cut(s) 155, 243, 897, 2049, 2108
DpnI GATC 6 cut(s) 329, 469, 870, 975, 1887, 1920
DpnII GATC 6 cut(s) 327, 467, 868, 973, 1885, 1918
DrdI GACNNNNNNGTC 1 cut(s) 1430
DriI GACNNNNNGTC 1 cut(s) 1279
DseDI GACNNNNNNGTC 1 cut(s) 1430
EaeI YGGCCR 5 cut(s) 87, 105, 109, 166, 221
EagI CGGCCG 1 cut(s) 105
Eam1104I CTCTTC 8 cut(s) 189, 405, 426, 642, 1636, 1773, 1965, 2060
Eam1105I GACNNNNNGTC 1 cut(s) 1279
EarI CTCTTC 8 cut(s) 189, 405, 426, 642, 1636, 1773, 1965, 2060
EciI GGCGGA 3 cut(s) 255, 276, 1626
Ecl136II GAGCTC 1 cut(s) 2053
EclXI CGGCCG 1 cut(s) 105
Eco130I CCWWGG 4 cut(s) 392, 576, 1221, 1284
Eco147I AGGCCT 1 cut(s) 884
Eco24I GRGCYC 3 cut(s) 705, 1875, 2055
Eco47I GGWCC 5 cut(s) 367, 436, 519, 1423, 2112
Eco52I CGGCCG 1 cut(s) 105
Eco53kI GAGCTC 1 cut(s) 2053
Eco57I CTGAAG 4 cut(s) 429, 1003, 1430, 2001
Eco88I CYCGRG 2 cut(s) 917, 2024
EcoICRI GAGCTC 1 cut(s) 2053
EcoO109I RGGNCCY 3 cut(s) 389, 519, 1871
EcoRII CCWGG 1 cut(s) 2004
EcoT14I CCWWGG 4 cut(s) 392, 576, 1221, 1284
EcoT22I ATGCAT 2 cut(s) 1389, 1681
EcoT38I GRGCYC 3 cut(s) 705, 1875, 2055
ErhI CCWWGG 4 cut(s) 392, 576, 1221, 1284
FalI AAGNNNNNCTT 2 cut(s) 1131, 1163
FaqI GGGAC 2 cut(s) 602, 1638
FauI CCCGC 1 cut(s) 508
FbaI TGATCA 2 cut(s) 868, 973
FokI GGATG 5 cut(s) 394, 704, 710, 1334, 1547
FriOI GRGCYC 3 cut(s) 705, 1875, 2055
FseI GGCCGGCC 1 cut(s) 111
FspBI CTAG 3 cut(s) 393, 1209, 1352
GlaI GCGC 7 cut(s) 10, 12, 148, 335, 337, 487, 1392
GsaI CCCAGC 1 cut(s) 321
GsuI CTGGAG 1 cut(s) 747
HaeII RGCGCY 1 cut(s) 150
HgaI GACGC 5 cut(s) 544, 1367, 1382, 1640, 1722
HhaI GCGC 7 cut(s) 11, 13, 149, 336, 338, 488, 1393
Hin1I GRCGYC 1 cut(s) 536
Hin6I GCGC 7 cut(s) 9, 11, 147, 334, 336, 486, 1391
HinP1I GCGC 7 cut(s) 9, 11, 147, 334, 336, 486, 1391
HincII GTYRAC 1 cut(s) 1273
HindII GTYRAC 1 cut(s) 1273
HindIII AAGCTT 3 cut(s) 1535, 1700, 2130
HphI GGTGA 7 cut(s) 304, 656, 668, 695, 748, 1049, 1979
Hpy166II GTNNAC 1 cut(s) 1273
Hpy8I GTNNAC 1 cut(s) 1273
Hpy99I CGWCG 2 cut(s) 355, 364
HpyAV CCTTC 7 cut(s) 109, 319, 541, 635, 1027, 1147, 1810
HpyCH4III ACNGT 2 cut(s) 1087, 1297
HpyCH4IV ACGT 2 cut(s) 123, 1503
HpyF3I CTNAG 5 cut(s) 155, 243, 897, 2049, 2108
HpySE526I ACGT 2 cut(s) 123, 1503
Hsp92I GRCGYC 1 cut(s) 536
HspAI GCGC 7 cut(s) 9, 11, 147, 334, 336, 486, 1391
Kpn2I TCCGGA 1 cut(s) 369
KpnI GGTACC 1 cut(s) 1858
KroI GCCGGC 1 cut(s) 107
KroNI GCCGGC 1 cut(s) 109
Ksp22I TGATCA 2 cut(s) 868, 973
Kzo9I GATC 6 cut(s) 327, 467, 868, 973, 1885, 1918
LguI GCTCTTC 2 cut(s) 189, 2060
LmnI GCTCC 4 cut(s) 55, 1043, 1144, 1795
Lsp1109I GCAGC 8 cut(s) 136, 193, 478, 484, 490, 1250, 1339, 1623
LweI GCATC 8 cut(s) 38, 345, 372, 555, 816, 903, 1894, 2083
MaeI CTAG 3 cut(s) 393, 1209, 1352
MaeII ACGT 2 cut(s) 123, 1503
MaeIII GTNAC 4 cut(s) 766, 1247, 2019, 2141
MalI GATC 6 cut(s) 329, 469, 870, 975, 1887, 1920
MbiI CCGCTC 2 cut(s) 58, 271
MboI GATC 6 cut(s) 327, 467, 868, 973, 1885, 1918
MfeI CAATTG 1 cut(s) 780
MflI RGATCY 1 cut(s) 1918
MhlI GDGCHC 4 cut(s) 705, 898, 1875, 2055
MlsI TGGCCA 1 cut(s) 89
MluCI AATT 4 cut(s) 780, 946, 1526, 1659
MluNI TGGCCA 1 cut(s) 89
MlyI GAGTC 6 cut(s) 224, 581, 763, 996, 1283, 2038
MmeI TCCRAC 1 cut(s) 1534
Mox20I TGGCCA 1 cut(s) 89
Mph1103I ATGCAT 2 cut(s) 1389, 1681
MroI TCCGGA 1 cut(s) 369
MroNI GCCGGC 1 cut(s) 107
MroXI GAANNNNTTC 1 cut(s) 1701
MscI TGGCCA 1 cut(s) 89
MseI TTAA 3 cut(s) 878, 1500, 1616
MslI CAYNNNNRTG 3 cut(s) 1476, 2085, 2120
Msp20I TGGCCA 1 cut(s) 89
MspA1I CMGCKG 3 cut(s) 220, 1330, 1408
MspR9I CCNGG 4 cut(s) 618, 713, 831, 2006
MunI CAATTG 1 cut(s) 780
Mva1269I GAATGC 2 cut(s) 787, 1519
MvaI CCWGG 1 cut(s) 2006
MvnI CGCG 6 cut(s) 11, 104, 336, 488, 1361, 1393
NaeI GCCGGC 1 cut(s) 109
NciI CCSGG 3 cut(s) 618, 713, 831
NcoI CCATGG 1 cut(s) 1284
NdeII GATC 6 cut(s) 327, 467, 868, 973, 1885, 1918
NgoMIV GCCGGC 1 cut(s) 107
NlaIV GGNNCC 7 cut(s) 65, 390, 520, 555, 1856, 1873, 1920
NmuCI GTSAC 3 cut(s) 766, 1247, 2019
NsiI ATGCAT 2 cut(s) 1389, 1681
NspI RCATGY 5 cut(s) 616, 1279, 1391, 1828, 2088
NspV TTCGAA 1 cut(s) 791
OliI CACNNNNGTG 1 cut(s) 2085
PaeI GCATGC 2 cut(s) 616, 1391
PaeR7I CTCGAG 1 cut(s) 917
PagI TCATGA 1 cut(s) 1396
PauI GCGCGC 2 cut(s) 9, 334
PceI AGGCCT 1 cut(s) 884
PciI ACATGT 1 cut(s) 2084
PciSI GCTCTTC 2 cut(s) 189, 2060
PcsI WCGNNNNNNNCGW 1 cut(s) 991
PctI GAATGC 2 cut(s) 787, 1519
PdiI GCCGGC 1 cut(s) 109
PdmI GAANNNNTTC 1 cut(s) 1701
PleI GAGTC 6 cut(s) 224, 580, 763, 995, 1283, 2037
PpsI GAGTC 6 cut(s) 224, 580, 763, 995, 1283, 2037
PpuMI RGGWCCY 1 cut(s) 519
PscI ACATGT 1 cut(s) 2084
PshAI GACNNNNGTC 1 cut(s) 365
Psp124BI GAGCTC 1 cut(s) 2055
Psp1406I AACGTT 1 cut(s) 1503
Psp5II RGGWCCY 1 cut(s) 519
Psp6I CCWGG 1 cut(s) 2004
PspFI CCCAGC 1 cut(s) 317
PspGI CCWGG 1 cut(s) 2004
PspN4I GGNNCC 7 cut(s) 65, 390, 520, 555, 1856, 1873, 1920
PspOMI GGGCCC 1 cut(s) 1871
PspPI GGNCC 8 cut(s) 367, 389, 436, 519, 1423, 1871, 1872, 2112
PspPPI RGGWCCY 1 cut(s) 519
PspXI VCTCGAGB 1 cut(s) 917
PsuI RGATCY 1 cut(s) 1918
PteI GCGCGC 2 cut(s) 9, 334
PvuII CAGCTG 2 cut(s) 1330, 1408
RigI GGCCGGCC 1 cut(s) 111
RsaI GTAC 2 cut(s) 1334, 1856
RsaNI GTAC 2 cut(s) 1333, 1855
RseI CAYNNNNRTG 3 cut(s) 1476, 2085, 2120
SacI GAGCTC 1 cut(s) 2055
SapI GCTCTTC 2 cut(s) 189, 2060
SaqAI TTAA 3 cut(s) 878, 1500, 1616
Sau3AI GATC 6 cut(s) 327, 467, 868, 973, 1885, 1918
Sau96I GGNCC 8 cut(s) 367, 389, 436, 519, 1423, 1871, 1872, 2112
SchI GAGTC 6 cut(s) 224, 581, 763, 996, 1283, 2038
ScrFI CCNGG 4 cut(s) 618, 713, 831, 2006
SduI GDGCHC 4 cut(s) 705, 898, 1875, 2055
SfaNI GCATC 8 cut(s) 38, 345, 372, 555, 816, 903, 1894, 2083
SfcI CTRYAG 1 cut(s) 1293
Sfr274I CTCGAG 1 cut(s) 917
SfuI TTCGAA 1 cut(s) 791
SgrAI CRCCGGYG 1 cut(s) 143
SinI GGWCC 5 cut(s) 367, 436, 519, 1423, 2112
SlaI CTCGAG 1 cut(s) 917
SmiMI CAYNNNNRTG 3 cut(s) 1476, 2085, 2120
SmlI CTYRAG 2 cut(s) 628, 917
SmoI CTYRAG 2 cut(s) 628, 917
SphI GCATGC 2 cut(s) 616, 1391
Sse9I AATT 4 cut(s) 780, 946, 1526, 1659
SseBI AGGCCT 1 cut(s) 884
SspI AATATT 1 cut(s) 852
SspMI CTAG 3 cut(s) 393, 1209, 1352
SstI GAGCTC 1 cut(s) 2055
StuI AGGCCT 1 cut(s) 884
StyD4I CCNGG 4 cut(s) 616, 711, 829, 2004
StyI CCWWGG 4 cut(s) 392, 576, 1221, 1284
TaaI ACNGT 2 cut(s) 1087, 1297
TaiI ACGT 2 cut(s) 126, 1506
TasI AATT 4 cut(s) 780, 946, 1526, 1659
Tru1I TTAA 3 cut(s) 878, 1500, 1616
Tru9I TTAA 3 cut(s) 878, 1500, 1616
TscAI CASTG 5 cut(s) 231, 771, 1090, 1492, 1882
TseFI GTSAC 3 cut(s) 766, 1247, 2019
TseI GCWGC 8 cut(s) 149, 181, 491, 497, 503, 1238, 1327, 1611
Tsp45I GTSAC 3 cut(s) 766, 1247, 2019
TspGWI ACGGA 5 cut(s) 186, 377, 758, 2048, 2115
TspRI CASTG 5 cut(s) 231, 771, 1090, 1492, 1882
VpaK11BI GGWCC 5 cut(s) 367, 436, 519, 1423, 2112
XapI RAATTY 2 cut(s) 946, 1526
XceI RCATGY 5 cut(s) 616, 1279, 1391, 1828, 2088
XhoI CTCGAG 1 cut(s) 917
XmaJI CCTAGG 1 cut(s) 392
XmnI GAANNNNTTC 1 cut(s) 1701
XspI CTAG 3 cut(s) 393, 1209, 1352
Zsp2I ATGCAT 2 cut(s) 1389, 1681
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.