Rmu_co8402805.1_g000001

Protein of unknown function (DUF632)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8402805.1
OG0009861
Physical Location & Seq
Reverse (-)
1 .. 1017
1017 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8402805.1_g000001.1.cds

Sequence Viewer

Length: 946 bp
atggggtgcgcgcagtcgagaatcgacaatgaggaatcggtgtcgagatgcaaggagcggaggaacctgatgagagaagcggtggtggccagaaacgccttcgcggccggccattccggctacgtcatggccttgaagaacaccggcgccgccttaagcgattacggccacggagaatcgcagcagacacaagaagagctactcctccatcacgaccagcggccactggaccccaccgcaaccgacccacctccgcctcctcctccgccgctcgagcacctccctccgccgccgccgcctctgcctcccaccccgccgatcgagcgcgccaccagcctgccgacgatgccgacggaggtccttaaaacgaggatgcagggggctaggttgcccgttgctgaagaggacgaggacgtggaagaagaggaccatgaggaagaaaaagggtttcgccggagatcgagaaagcaaatgggcgccgcggctgcgacggggtcctcatcgccgcagacgccggagatgaaggcggtgccgccgccgttgccggagtccaagggtgcggcttgggactatttcttcatggtggataacatgccggggcatagcttgagtgagaatgaaggtgaagagtttggtgaagatgagaatgtggatgatttgggtgatggggatgagcccaagaccccggagaaagagaaggagattcaggtgaagccggaatcggagattccgattccggtgtctccagtgactccggcgacaattgagcattcgaagacagccccatcggattttcagaggatggtgatgcccggttttactttgatggaaatattgaatcagattgatgatcatttcttaaaggcctcggagagtgctcaggaggtttccaagatgcttgaggccactcgattgcattatcactcgaattttgctgataatcgag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF630 DUF632

Protein Analysis

315

Amino Acids

34.83

Weight (kDa)

4.76

Isoelectric Point (pI)

68.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 146, 476, 529
AccBSI CCGCTC 2 cut(s) 58, 271
AccII CGCG 4 cut(s) 11, 104, 327, 482
AcoI YGGCCR 5 cut(s) 87, 105, 109, 166, 221
AcsI RAATTY 1 cut(s) 928
AcuI CTGAAG 1 cut(s) 420
AcyI GRCGYC 3 cut(s) 147, 477, 512
AflII CTTAAG 1 cut(s) 154
AgsI TTSAA 2 cut(s) 136, 838
AjiI CACGTC 1 cut(s) 415
AluBI AGCT 2 cut(s) 199, 606
AluI AGCT 2 cut(s) 199, 606
Alw21I GWGCWC 2 cut(s) 279, 880
Alw26I GTCTC 1 cut(s) 747
Ama87I CYCGRG 1 cut(s) 272
AoxI GGCC 8 cut(s) 87, 105, 109, 129, 166, 221, 864, 903
ApeKI GCWGC 2 cut(s) 181, 485
ApoI RAATTY 1 cut(s) 928
AspLEI GCGC 6 cut(s) 11, 13, 149, 327, 329, 479
AspS9I GGNCC 4 cut(s) 229, 358, 427, 495
AsuC2I CCSGG 3 cut(s) 597, 686, 813
AsuHPI GGTGA 5 cut(s) 635, 647, 674, 721, 817
AsuII TTCGAA 1 cut(s) 773
AvaI CYCGRG 1 cut(s) 272
AvaII GGWCC 4 cut(s) 229, 358, 427, 495
BalI TGGCCA 1 cut(s) 89
BanI GGYRCC 3 cut(s) 146, 476, 529
BanII GRGCYC 1 cut(s) 678
BbsI GAAGAC 1 cut(s) 782
Bbv12I GWGCWC 2 cut(s) 279, 880
BbvI GCAGC 2 cut(s) 193, 472
BccI CCATC 5 cut(s) 216, 659, 793, 796, 820
BceAI ACGGC 2 cut(s) 181, 523
BclI TGATCA 1 cut(s) 850
BcnI CCSGG 3 cut(s) 597, 686, 813
BcoDI GTCTC 1 cut(s) 747
BfaI CTAG 1 cut(s) 384
BfoI RGCGCY 2 cut(s) 150, 480
BfrI CTTAAG 1 cut(s) 154
BglI GCCNNNNNGGC 2 cut(s) 104, 117
Bme1390I CCNGG 3 cut(s) 597, 686, 813
Bme18I GGWCC 4 cut(s) 229, 358, 427, 495
BmeT110I CYCGRG 1 cut(s) 272
BmgBI CACGTC 1 cut(s) 415
BmgT120I GGNCC 4 cut(s) 229, 358, 427, 495
BmiI GGNNCC 6 cut(s) 65, 148, 231, 478, 496, 531
BmrFI CCNGG 3 cut(s) 597, 686, 813
BmsI GCATC 5 cut(s) 38, 336, 363, 798, 885
BoxI GACNNNNGTC 1 cut(s) 356
BpiI GAAGAC 1 cut(s) 782
BpmI CTGGAG 1 cut(s) 729
Bpu10I CCTNAGC 1 cut(s) 879
Bpu14I TTCGAA 1 cut(s) 773
BpuEI CTTGAG 2 cut(s) 628, 920
BpuMI CCSGG 3 cut(s) 597, 686, 813
BsaHI GRCGYC 3 cut(s) 147, 477, 512
BsaJI CCNNGG 6 cut(s) 169, 480, 552, 596, 684, 867
BsaWI WCCGGW 1 cut(s) 736
Bse118I RCCGGY 2 cut(s) 107, 143
Bse1I ACTGG 2 cut(s) 231, 746
BseDI CCNNGG 6 cut(s) 169, 480, 552, 596, 684, 867
BseGI GGATG 4 cut(s) 378, 658, 676, 807
BseMII CTCAG 1 cut(s) 893
BseNI ACTGG 2 cut(s) 231, 746
BsePI GCGCGC 2 cut(s) 9, 325
BseRI GAGGAG 3 cut(s) 194, 249, 252
BseX3I CGGCCG 1 cut(s) 105
BseXI GCAGC 2 cut(s) 193, 472
Bsh1236I CGCG 4 cut(s) 11, 104, 327, 482
Bsh1285I CGRYCG 2 cut(s) 108, 321
BshFI GGCC 8 cut(s) 89, 107, 111, 131, 168, 223, 866, 905
BshNI GGYRCC 3 cut(s) 146, 476, 529
BsiEI CGRYCG 2 cut(s) 108, 321
BsiHKAI GWGCWC 2 cut(s) 279, 880
BsiHKCI CYCGRG 1 cut(s) 272
BslFI GGGAC 1 cut(s) 581
BsmAI GTCTC 1 cut(s) 747
BsmFI GGGAC 1 cut(s) 581
BsmI GAATGC 1 cut(s) 769
BsnI GGCC 8 cut(s) 89, 107, 111, 131, 168, 223, 866, 905
BsoBI CYCGRG 1 cut(s) 272
Bsp119I TTCGAA 1 cut(s) 773
Bsp1286I GDGCHC 3 cut(s) 279, 678, 880
Bsp143I GATC 3 cut(s) 318, 458, 850
BspANI GGCC 8 cut(s) 89, 107, 111, 131, 168, 223, 866, 905
BspCNI CTCAG 1 cut(s) 892
BspFNI CGCG 4 cut(s) 11, 104, 327, 482
BspLI GGNNCC 6 cut(s) 65, 148, 231, 478, 496, 531
BspQI GCTCTTC 1 cut(s) 189
BspT104I TTCGAA 1 cut(s) 773
BspT107I GGYRCC 3 cut(s) 146, 476, 529
BspTI CTTAAG 1 cut(s) 154
BsrBI CCGCTC 2 cut(s) 58, 271
BsrFI RCCGGY 2 cut(s) 107, 143
BsrI ACTGG 2 cut(s) 231, 746
BssAI RCCGGY 2 cut(s) 107, 143
BssECI CCNNGG 6 cut(s) 169, 480, 552, 596, 684, 867
BssHII GCGCGC 2 cut(s) 9, 325
BssMI GATC 3 cut(s) 318, 458, 850
BssNI GRCGYC 3 cut(s) 147, 477, 512
BssT1I CCWWGG 1 cut(s) 552
Bst6I CTCTTC 4 cut(s) 189, 396, 417, 621
BstACI GRCGYC 3 cut(s) 147, 477, 512
BstAFI CTTAAG 1 cut(s) 154
BstBI TTCGAA 1 cut(s) 773
BstC8I GCNNGC 4 cut(s) 11, 109, 327, 338
BstDEI CTNAG 1 cut(s) 879
BstDSI CCRYGG 2 cut(s) 169, 480
BstF5I GGATG 4 cut(s) 378, 658, 676, 807
BstFNI CGCG 4 cut(s) 11, 104, 327, 482
BstH2I RGCGCY 2 cut(s) 150, 480
BstHHI GCGC 6 cut(s) 11, 13, 149, 327, 329, 479
BstKTI GATC 3 cut(s) 321, 461, 853
BstMAI GTCTC 1 cut(s) 747
BstMBI GATC 3 cut(s) 318, 458, 850
BstMCI CGRYCG 2 cut(s) 108, 321
BstNSI RCATGY 1 cut(s) 595
BstPAI GACNNNNGTC 1 cut(s) 356
BstSCI CCNGG 3 cut(s) 595, 684, 811
BstUI CGCG 4 cut(s) 11, 104, 327, 482
BstV1I GCAGC 2 cut(s) 193, 472
BstV2I GAAGAC 1 cut(s) 782
BstZI CGGCCG 1 cut(s) 105
BsuRI GGCC 8 cut(s) 89, 107, 111, 131, 168, 223, 866, 905
BtgI CCRYGG 2 cut(s) 169, 480
BtgZI GCGATG 1 cut(s) 486
BtrI CACGTC 1 cut(s) 415
BtsCI GGATG 4 cut(s) 378, 658, 676, 807
BtsIMutI CAGTG 2 cut(s) 224, 753
Cac8I GCNNGC 4 cut(s) 11, 109, 327, 338
CfoI GCGC 6 cut(s) 11, 13, 149, 327, 329, 479
Cfr10I RCCGGY 2 cut(s) 107, 143
Cfr13I GGNCC 4 cut(s) 229, 358, 427, 495
Cfr42I CCGCGG 1 cut(s) 483
CseI GACGC 1 cut(s) 520
CviAII CATG 4 cut(s) 127, 431, 580, 592
DdeI CTNAG 1 cut(s) 879
DinI GGCGCC 2 cut(s) 148, 478
DpnI GATC 3 cut(s) 320, 460, 852
DpnII GATC 3 cut(s) 318, 458, 850
EaeI YGGCCR 5 cut(s) 87, 105, 109, 166, 221
EagI CGGCCG 1 cut(s) 105
Eam1104I CTCTTC 4 cut(s) 189, 396, 417, 621
EarI CTCTTC 4 cut(s) 189, 396, 417, 621
EciI GGCGGA 3 cut(s) 243, 255, 276
EclXI CGGCCG 1 cut(s) 105
Eco130I CCWWGG 1 cut(s) 552
Eco147I AGGCCT 1 cut(s) 866
Eco24I GRGCYC 1 cut(s) 678
Eco47I GGWCC 4 cut(s) 229, 358, 427, 495
Eco52I CGGCCG 1 cut(s) 105
Eco57I CTGAAG 1 cut(s) 420
Eco88I CYCGRG 1 cut(s) 272
EcoO109I RGGNCCY 2 cut(s) 358, 495
EcoT14I CCWWGG 1 cut(s) 552
EcoT38I GRGCYC 1 cut(s) 678
EgeI GGCGCC 2 cut(s) 148, 478
EheI GGCGCC 2 cut(s) 148, 478
ErhI CCWWGG 1 cut(s) 552
FaeI CATG 4 cut(s) 130, 434, 583, 595
FaiI YATR 5 cut(s) 128, 432, 581, 593, 603
FaqI GGGAC 1 cut(s) 581
FatI CATG 4 cut(s) 126, 430, 579, 591
FauI CCCGC 1 cut(s) 321
FbaI TGATCA 1 cut(s) 850
FokI GGATG 4 cut(s) 385, 665, 683, 814
FriOI GRGCYC 1 cut(s) 678
FseI GGCCGGCC 1 cut(s) 111
FspBI CTAG 1 cut(s) 384
GlaI GCGC 6 cut(s) 10, 12, 148, 326, 328, 478
GsuI CTGGAG 1 cut(s) 729
HaeII RGCGCY 2 cut(s) 150, 480
HaeIII GGCC 8 cut(s) 89, 107, 111, 131, 168, 223, 866, 905
HgaI GACGC 1 cut(s) 520
HhaI GCGC 6 cut(s) 11, 13, 149, 327, 329, 479
Hin1I GRCGYC 3 cut(s) 147, 477, 512
Hin1II CATG 4 cut(s) 130, 434, 583, 595
Hin6I GCGC 6 cut(s) 9, 11, 147, 325, 327, 477
HinP1I GCGC 6 cut(s) 9, 11, 147, 325, 327, 477
HphI GGTGA 5 cut(s) 635, 647, 674, 721, 817
Hpy188I TCNGA 6 cut(s) 724, 732, 790, 798, 843, 871
Hpy188III TCNNGA 5 cut(s) 18, 45, 212, 462, 881
Hpy99I CGWCG 3 cut(s) 346, 355, 493
HpyAV CCTTC 4 cut(s) 109, 517, 614, 691
HpyCH4IV ACGT 2 cut(s) 123, 414
HpyCH4V TGCA 3 cut(s) 51, 376, 916
HpyF3I CTNAG 1 cut(s) 879
HpySE526I ACGT 2 cut(s) 123, 414
Hsp92I GRCGYC 3 cut(s) 147, 477, 512
Hsp92II CATG 4 cut(s) 130, 434, 583, 595
HspAI GCGC 6 cut(s) 9, 11, 147, 325, 327, 477
KasI GGCGCC 2 cut(s) 146, 476
KroI GCCGGC 1 cut(s) 107
KroNI GCCGGC 1 cut(s) 109
Ksp22I TGATCA 1 cut(s) 850
KspI CCGCGG 1 cut(s) 483
Kzo9I GATC 3 cut(s) 318, 458, 850
LguI GCTCTTC 1 cut(s) 189
LmnI GCTCC 1 cut(s) 55
Lsp1109I GCAGC 2 cut(s) 193, 472
LweI GCATC 5 cut(s) 38, 336, 363, 798, 885
MaeI CTAG 1 cut(s) 384
MaeII ACGT 2 cut(s) 123, 414
MaeIII GTNAC 1 cut(s) 748
MalI GATC 3 cut(s) 320, 460, 852
MbiI CCGCTC 2 cut(s) 58, 271
MboI GATC 3 cut(s) 318, 458, 850
MfeI CAATTG 1 cut(s) 762
MhlI GDGCHC 3 cut(s) 279, 678, 880
MlsI TGGCCA 1 cut(s) 89
MluCI AATT 2 cut(s) 762, 928
MluNI TGGCCA 1 cut(s) 89
Mly113I GGCGCC 2 cut(s) 147, 477
MlyI GAGTC 2 cut(s) 557, 745
Mox20I TGGCCA 1 cut(s) 89
MroNI GCCGGC 1 cut(s) 107
MscI TGGCCA 1 cut(s) 89
MseI TTAA 3 cut(s) 155, 363, 860
Msp20I TGGCCA 1 cut(s) 89
MspA1I CMGCKG 2 cut(s) 220, 482
MspCI CTTAAG 1 cut(s) 154
MspR9I CCNGG 3 cut(s) 597, 686, 813
MunI CAATTG 1 cut(s) 762
Mva1269I GAATGC 1 cut(s) 769
MvnI CGCG 4 cut(s) 11, 104, 327, 482
NaeI GCCGGC 1 cut(s) 109
NarI GGCGCC 2 cut(s) 147, 477
NciI CCSGG 3 cut(s) 597, 686, 813
NdeII GATC 3 cut(s) 318, 458, 850
NgoMIV GCCGGC 1 cut(s) 107
NlaIII CATG 4 cut(s) 130, 434, 583, 595
NlaIV GGNNCC 6 cut(s) 65, 148, 231, 478, 496, 531
NmuCI GTSAC 1 cut(s) 748
NspI RCATGY 1 cut(s) 595
NspV TTCGAA 1 cut(s) 773
PaeR7I CTCGAG 1 cut(s) 272
PauI GCGCGC 2 cut(s) 9, 325
PceI AGGCCT 1 cut(s) 866
PciSI GCTCTTC 1 cut(s) 189
PcsI WCGNNNNNNNCGW 1 cut(s) 728
PctI GAATGC 1 cut(s) 769
PdiI GCCGGC 1 cut(s) 109
PfeI GAWTC 8 cut(s) 21, 35, 176, 703, 719, 727, 733, 838
PflFI GACNNNGTC 1 cut(s) 493
Ple19I CGATCG 1 cut(s) 321
PleI GAGTC 2 cut(s) 556, 745
PluTI GGCGCC 2 cut(s) 150, 480
PpsI GAGTC 2 cut(s) 556, 745
PpuMI RGGWCCY 2 cut(s) 358, 495
PshAI GACNNNNGTC 1 cut(s) 356
Psp5II RGGWCCY 2 cut(s) 358, 495
PspN4I GGNNCC 6 cut(s) 65, 148, 231, 478, 496, 531
PspPI GGNCC 4 cut(s) 229, 358, 427, 495
PspPPI RGGWCCY 2 cut(s) 358, 495
PspXI VCTCGAGB 1 cut(s) 272
PsyI GACNNNGTC 1 cut(s) 493
PteI GCGCGC 2 cut(s) 9, 325
PvuI CGATCG 1 cut(s) 321
RigI GGCCGGCC 1 cut(s) 111
SacII CCGCGG 1 cut(s) 483
SapI GCTCTTC 1 cut(s) 189
SaqAI TTAA 3 cut(s) 155, 363, 860
Sau3AI GATC 3 cut(s) 318, 458, 850
Sau96I GGNCC 4 cut(s) 229, 358, 427, 495
SchI GAGTC 2 cut(s) 557, 745
ScrFI CCNGG 3 cut(s) 597, 686, 813
SduI GDGCHC 3 cut(s) 279, 678, 880
SfaNI GCATC 5 cut(s) 38, 336, 363, 798, 885
SfoI GGCGCC 2 cut(s) 148, 478
Sfr274I CTCGAG 1 cut(s) 272
Sfr303I CCGCGG 1 cut(s) 483
SfuI TTCGAA 1 cut(s) 773
SgrAI CRCCGGYG 1 cut(s) 143
SgrBI CCGCGG 1 cut(s) 483
SinI GGWCC 4 cut(s) 229, 358, 427, 495
SlaI CTCGAG 1 cut(s) 272
SmlI CTYRAG 4 cut(s) 154, 272, 607, 899
SmoI CTYRAG 4 cut(s) 154, 272, 607, 899
Sse9I AATT 2 cut(s) 762, 928
SseBI AGGCCT 1 cut(s) 866
SspDI GGCGCC 2 cut(s) 146, 476
SspI AATATT 1 cut(s) 834
SspMI CTAG 1 cut(s) 384
StuI AGGCCT 1 cut(s) 866
StyD4I CCNGG 3 cut(s) 595, 684, 811
StyI CCWWGG 1 cut(s) 552
TaiI ACGT 2 cut(s) 126, 417
TasI AATT 2 cut(s) 762, 928
TfiI GAWTC 8 cut(s) 21, 35, 176, 703, 719, 727, 733, 838
Tru1I TTAA 3 cut(s) 155, 363, 860
Tru9I TTAA 3 cut(s) 155, 363, 860
TscAI CASTG 2 cut(s) 231, 753
TseFI GTSAC 1 cut(s) 748
TseI GCWGC 2 cut(s) 181, 485
Tsp45I GTSAC 1 cut(s) 748
TspDTI ATGAA 3 cut(s) 536, 568, 633
TspGWI ACGGA 2 cut(s) 186, 368
TspRI CASTG 2 cut(s) 231, 753
Tth111I GACNNNGTC 1 cut(s) 493
Vha464I CTTAAG 1 cut(s) 154
VpaK11BI GGWCC 4 cut(s) 229, 358, 427, 495
XapI RAATTY 1 cut(s) 928
XceI RCATGY 1 cut(s) 595
XhoI CTCGAG 1 cut(s) 272
XspI CTAG 1 cut(s) 384
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.