Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0007018

Physical Location & Seq

Genomic Coordinates Forward (+)

8250967 .. 8255209

Gene Structure 4243 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g12110.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2463 bp

ATGGCGACAGGGGGAAAATATACTAGAGTAGATAATAGGAGGCCGTCCTCCGGGAGTGGTTGCTGCTCCACCGTCACCGTCGTGGTGTTTGTGGCGTTGTGCTTGGTCGGGGTTTGGATGATGACCTCCTCCTCTGTAGTTCCCATTCAGAATGTGGATGTGCCCACGGAGGAGAATAAGAGTGAACACAAGGAGCAGGGCAGCAATAACGTCGGCGTCAAGGAACAAGCGAGTGACACCAATGCCAGGCAATTTGAAGATAACCCGGGTGACTTACCCGATGACGCAACCAAAGGAGACAGCAGCGATGGTGCTGCTCAGGGTGGAGACAAGCTACAAGGGAAGTCCGAAGAGAAGACTGAGGAGAAGTTTGTGGAAAAGACTCAAGAGACACCTGAGGAGAAAACCCAAGACAAGATTGAGGAGAAAAGTGAAGAAAAGATTGAGGAGAAATCTGAAGATGGCGACTCGAAGGTGGAGAATGGAGAATTGAATTCCGAAAATGGAGAAAAAAAGAGCGATGGCGGTGAAAAGGACAAGTCTGATTCCGATGATAACGAGAAGAAATCGGATGATGGCAGTGATAAAAAATTAGACAAGTCTGAAGAAACAAACGATACAGTTAAGGTGAATGGTGAGACAGAGGAGAAGGTGGAGGTAACCGATACCAAGGAGTCAAATGGGGAGAAAAAGGAAAATGAGCAGGCCAAAAACCAGAGTTCAAATGAGGTATTTCCGTCCGTTGCTCAGTCGGAGCTATTGAACGAGACTACAACTCAAAATAGTTCGTGGTCAACTCAGTCGGCAGAGTCAAAGAATGAGAAGGAGGCTCAGCGTGCTTCTGATCAGAAGATCAGTTACAACTGGAAAGTCTGCAATTCCACTGCTGGGCCTGATTTCATCCCCTGCCTTGACAATTTGCAAGCCATCAAGAGTCTTCGAAGTACCAAGCATTACGAGCACCGGGAGAGGCATTGTCCCGAGGAGGCCCCCACCTGCCTTGTTCCTCTTCCAGAAGGTTATAGACGCCCAATTGAGTGGCCAACAAGCAGGGAAAAGGTATGGTACTACAATGTTCCCCATACAAAGCTTGTTCAAATTAAGGGGCATCAGAATTGGGTCAAAGTTACCGGTGAATACCTTACTTTTCCCGGTGGTGGAACACAATTCAAGCATGGTGCTCTTCATTATATTGATTTCATACAACAGTCTGTTCCTGATATTGCCTGGGGAAAACGTTCACGGGTCATATTAGATGTTGGATGTGGAGTTGCAAGCTTTGGAGGCTTTCTTTTTGACAGAGATGTCCTTGCAATGTCATTGGCCCCAAAAGATGAGCATGAAGCTCAAGTACAGTTTGCACTTGAAAGAGGAATTCCTGCCATATCTGCTGTGATGGGCACAAAGAGACTTCCCTTCCCCGGCCAAGTTTTTGATGTTGTCCACTGTGCCCGCTGCAGGGTTCCTTGGCATATAGAAGGTGGTAAGCTTCTATTGGAGCTGAACCGAGTGTTGAGACCTGGTGGTTTCTTTGTATGGTCTGCTACTCCAGTGTATAAGAAGCTGGGTGAAGATGTTGAAATATGGAATGCCATGAAGGAACTAACCAAATCAATATGCTGGGAACTGGTGTCAATTAGTAAGGATACAGTAAATGGAGTTGGTATTGCTATATACAAAAAGCCTACTTCGAATGAGTGCTATGAGAAAAGATCACAGAACGAGCCTCCTATCTGTACTAAGTCTGATGATCCAAATGCTGCCTGGAATGTGCCATTACAAGCATGCATCCACGAAGTGCCTGTAAATGCAACAAAACGTGGGTCTGAATGGCCTGAACAATGGCCGGCGAGGTTGGGCAAGGCACCTTACTGGTTGTTAAGTTCCCAAGTTGGTGTTTATGGAAAACCTGCTCCTGAGGATTTCACTTCAGACAATGAGCACTGGAAACGTGTGGTGACAAAGTCATATCTGAATGGAATGGGGATTAACTGGAAATCTGTTCGGAATGTTATGGACATGAGAGCTGTGTACGGAGGATTTGCTGCCGCTTTGAAAGATTTGAAAATTTGGGTCATGAATGTAGTCTCAGTAGACTCTCCAGACACATTACCCATAATTTACGAGCGAGGTTTGTTTGGTATGTATCATGATTGGTGTGAGTCATTTAACACCTATCCAAGGTCTTATGATCTTCTCCATGCCGATCATCTGTTTTCCAAGCTTAAGAAGAGGTGCAATTTAGTGGCTGTAGTTGCGGAGGTTGATCGAATCCTTCGACCAGAGGGAAAGCTTATCGTGCGAGACGATGTTGAGACTATTTACGAGCTGGAGAACATGGCGAGGTCGATGCAGTGGGAGGTTAGCCTGACGTATTCAAAGGACAAGGAGGGATTGCTTTGTGTGCAGAAGTCCATGTGGCGGCCCGAAGAGTCGGAGTCACTCAAGTATGCAATTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0012505 GO:0016740 GO:0016741 GO:0031410 GO:0031982 GO:0031984 GO:0032259 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_29

Protein Analysis

821

Amino Acids

92.07

Weight (kDa)

5.3

Isoelectric Point (pI)

42.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_29	PF03141	299 - 804	7.9e-232	Putative S-adenosyl-L-methionine-dependent methyltransferase
Methyltransf_25	PF13649	417 - 509	8.2e-06	Methyltransferase domain
Methyltransf_11	PF08241	418 - 512	2.1e-06	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007018)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64030
fragaria_vesca	FvH4_1g24543 FvH4_1g24543 FvH4_1g24543 FvH4_1g24543 FvH4_1g24543
malus_domestica	MD15G1134500.v1.1
prunus_persica	Prupe.4G273900_v2.0.a1 Prupe.4G273900_v2.0.a1
pyrus_communis	pycom15g12110 pycom505g00120
rosa_chinensis	RchiOBHm_Chr2g0121981
rosa_laevigata	RLG00000018644
rosa_multiflora	Rmu_sc0003880.1_g000014
rosa_roxburghii	Rroxscaffold_2G00122100
rosa_rugosa	Rorug02G0235700 Rorug02G0235800
rosa_samantha	Rh2AG292400 Rh2BG302900 Rh2CG281500 Rh2DG316600 Rh2DG316700 Rh4AG294200 Rh4BG300200
rosa_wichuraiana	Rw2G023450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1004
AasI	GACNNNNNNGTC	1 cut(s)	1304
Acc36I	ACCTGC	2 cut(s)	1004, 1918
AccB1I	GGYRCC	1 cut(s)	1864
AccI	GTMKAC	1 cut(s)	2094
AciI	CCGC	5 cut(s)	525, 1453, 2049, 2258, 2422
AclI	AACGTT	1 cut(s)	1237
AclWI	GGATC	1 cut(s)	1745
AcoI	YGGCCR	3 cut(s)	1040, 1423, 1844
AcsI	RAATTY	3 cut(s)	493, 1374, 2067
AcuI	CTGAAG	3 cut(s)	477, 624, 1914
AcyI	GRCGYC	2 cut(s)	216, 1027
AdeI	CACNNNGTG	1 cut(s)	1798
AfaI	GTAC	5 cut(s)	946, 1067, 1353, 1738, 2033
AfiI	CCNNNNNNNGG	9 cut(s)	50, 246, 888, 1157, 1421, 1458, 1459, 2181, 2421
AflII	CTTAAG	1 cut(s)	2225
AflIII	ACRYGT	1 cut(s)	1951
AgeI	ACCGGT	1 cut(s)	1130
AjnI	CCWGG	4 cut(s)	245, 1226, 1519, 1763
AleI	CACNNNNGTG	1 cut(s)	80
Alw21I	GWGCWC	3 cut(s)	963, 1183, 1944
AlwI	GGATC	1 cut(s)	1745
Ama87I	CYCGRG	2 cut(s)	265, 980
ApeKI	GCWGC	7 cut(s)	63, 201, 303, 314, 1455, 1760, 2045
ApoI	RAATTY	3 cut(s)	493, 1374, 2067
ArsI	GACNNNNNNTTYG	2 cut(s)	1808, 1840
AsiGI	ACCGGT	1 cut(s)	1130
Asp700I	GAANNNNTTC	1 cut(s)	1237
AspS9I	GGNCC	4 cut(s)	890, 988, 1324, 2424
AsuC2I	CCSGG	6 cut(s)	52, 266, 267, 965, 1152, 1422
AsuHPI	GGTGA	8 cut(s)	67, 281, 539, 640, 647, 1145, 1580, 1969
AsuII	TTCGAA	2 cut(s)	940, 1691
AvaI	CYCGRG	2 cut(s)	265, 980
AxyI	CCTNAGG	2 cut(s)	396, 1917
BaeGI	GKGCMC	3 cut(s)	165, 1403, 1453
BalI	TGGCCA	1 cut(s)	1042
BanI	GGYRCC	1 cut(s)	1864
BarI	GAAGNNNNNNTAC	4 cut(s)	842, 874, 1335, 1367
BbsI	GAAGAC	2 cut(s)	362, 929
Bbv12I	GWGCWC	3 cut(s)	963, 1183, 1944
BbvI	GCAGC	7 cut(s)	50, 213, 301, 315, 1442, 1747, 2032
BccI	CCATC	6 cut(s)	302, 455, 515, 569, 935, 1390
BceAI	ACGGC	1 cut(s)	28
BcgI	CGANNNNNNTGC	6 cut(s)	193, 227, 296, 330, 2332, 2366
BciT130I	CCWGG	4 cut(s)	247, 1228, 1521, 1765
BciVI	GTATCC	1 cut(s)	1639
BclI	TGATCA	1 cut(s)	844
BcnI	CCSGG	6 cut(s)	52, 266, 267, 965, 1152, 1422
BfaI	CTAG	1 cut(s)	24
BfmI	CTRYAG	3 cut(s)	135, 1456, 2250
BfrI	CTTAAG	1 cut(s)	2225
BfuAI	ACCTGC	2 cut(s)	1004, 1918
BfuI	GTATCC	1 cut(s)	1639
BisI	GCNGC	9 cut(s)	64, 202, 304, 315, 1456, 1761, 2046, 2049, 2423
BlpI	GCTNAGC	1 cut(s)	831
BlsI	GCNGC	9 cut(s)	65, 203, 305, 316, 1457, 1762, 2047, 2050, 2424
BmeT110I	CYCGRG	2 cut(s)	265, 980
BmgT120I	GGNCC	4 cut(s)	890, 988, 1324, 2424
BmiI	GGNNCC	4 cut(s)	990, 1326, 1464, 1866
BmsI	GCATC	3 cut(s)	1117, 1797, 2340
BpiI	GAAGAC	2 cut(s)	362, 929
BpmI	CTGGAG	3 cut(s)	1533, 2085, 2351
Bpu10I	CCTNAGC	1 cut(s)	318
Bpu1102I	GCTNAGC	1 cut(s)	831
Bpu14I	TTCGAA	2 cut(s)	940, 1691
BpuEI	CTTGAG	3 cut(s)	369, 1332, 2429
BpuMI	CCSGG	6 cut(s)	52, 266, 267, 965, 1152, 1422
BsaHI	GRCGYC	2 cut(s)	216, 1027
BsaI	GGTCTC	1 cut(s)	1510
BsaJI	CCNNGG	8 cut(s)	165, 265, 669, 981, 1227, 1420, 1466, 2180
BsaWI	WCCGGW	1 cut(s)	1130
Bsc4I	CCNNNNNNNGG	9 cut(s)	50, 246, 888, 1157, 1421, 1458, 1459, 2181, 2421
Bse118I	RCCGGY	2 cut(s)	1130, 1846
Bse1I	ACTGG	6 cut(s)	869, 1550, 1632, 1877, 1949, 1997
Bse21I	CCTNAGG	2 cut(s)	396, 1917
Bse3DI	GCAATG	1 cut(s)	1320
BseBI	CCWGG	4 cut(s)	247, 1228, 1521, 1765
BseDI	CCNNGG	8 cut(s)	165, 265, 669, 981, 1227, 1420, 1466, 2180
BseGI	GGATG	6 cut(s)	123, 163, 577, 900, 1268, 1788
BseLI	CCNNNNNNNGG	9 cut(s)	50, 246, 888, 1157, 1421, 1458, 1459, 2181, 2421
BseMI	GCAATG	1 cut(s)	1320
BseMII	CTCAG	8 cut(s)	332, 351, 387, 761, 812, 845, 1908, 2103
BseNI	ACTGG	6 cut(s)	869, 1550, 1632, 1877, 1949, 1997
BseRI	GAGGAG	9 cut(s)	118, 121, 185, 377, 413, 437, 461, 659, 998
BseSI	GKGCMC	3 cut(s)	165, 1403, 1453
BseXI	GCAGC	7 cut(s)	50, 213, 301, 315, 1442, 1747, 2032
BseYI	CCCAGC	3 cut(s)	887, 1564, 1620
BsgI	GTGCAG	1 cut(s)	2426
BshNI	GGYRCC	1 cut(s)	1864
BshTI	ACCGGT	1 cut(s)	1130
BsiHKAI	GWGCWC	3 cut(s)	963, 1183, 1944
BsiHKCI	CYCGRG	2 cut(s)	265, 980
BsiSI	CCGG	7 cut(s)	51, 266, 964, 1131, 1152, 1422, 1847
BslFI	GGGAC	1 cut(s)	963
BslI	CCNNNNNNNGG	9 cut(s)	50, 246, 888, 1157, 1421, 1458, 1459, 2181, 2421
BsmBI	CGTCTC	1 cut(s)	2298
BsmFI	GGGAC	1 cut(s)	963
BsmI	GAATGC	1 cut(s)	1594
Bso31I	GGTCTC	1 cut(s)	1510
BsoBI	CYCGRG	2 cut(s)	265, 980
Bsp119I	TTCGAA	2 cut(s)	940, 1691
Bsp1286I	GDGCHC	6 cut(s)	165, 963, 1183, 1403, 1453, 1944
Bsp143I	GATC	7 cut(s)	844, 852, 1712, 1750, 2191, 2206, 2266
Bsp1720I	GCTNAGC	1 cut(s)	831
BspACI	CCGC	5 cut(s)	525, 1453, 2049, 2258, 2422
BspCNI	CTCAG	8 cut(s)	331, 352, 388, 760, 811, 844, 1909, 2102
BspHI	TCATGA	2 cut(s)	2076, 2149
BspLI	GGNNCC	4 cut(s)	990, 1326, 1464, 1866
BspMAI	CTGCAG	1 cut(s)	1460
BspMI	ACCTGC	2 cut(s)	1004, 1918
BspPI	GGATC	1 cut(s)	1745
BspQI	GCTCTTC	1 cut(s)	1188
BspT104I	TTCGAA	2 cut(s)	940, 1691
BspT107I	GGYRCC	1 cut(s)	1864
BspTI	CTTAAG	1 cut(s)	2225
BspTNI	GGTCTC	1 cut(s)	1510
BsrDI	GCAATG	1 cut(s)	1320
BsrFI	RCCGGY	2 cut(s)	1130, 1846
BsrI	ACTGG	6 cut(s)	869, 1550, 1632, 1877, 1949, 1997
BssAI	RCCGGY	2 cut(s)	1130, 1846
BssECI	CCNNGG	8 cut(s)	165, 265, 669, 981, 1227, 1420, 1466, 2180
BssMI	GATC	7 cut(s)	844, 852, 1712, 1750, 2191, 2206, 2266
BssNI	GRCGYC	2 cut(s)	216, 1027
BssT1I	CCWWGG	3 cut(s)	669, 1466, 2180
Bst2UI	CCWGG	4 cut(s)	247, 1228, 1521, 1765
Bst4CI	ACNGT	7 cut(s)	73, 79, 622, 1209, 1356, 1448, 1651
Bst6I	CTCTTC	5 cut(s)	345, 1014, 1188, 2225, 2424
BstACI	GRCGYC	2 cut(s)	216, 1027
BstAFI	CTTAAG	1 cut(s)	2225
BstBI	TTCGAA	2 cut(s)	940, 1691
BstC8I	GCNNGC	7 cut(s)	705, 837, 924, 1276, 1453, 1786, 1848
BstDEI	CTNAG	9 cut(s)	318, 360, 396, 747, 798, 831, 1740, 1917, 2089
BstDSI	CCRYGG	1 cut(s)	165
BstEII	GGTNACC	1 cut(s)	658
BstENI	CCTNNNNNAGG	1 cut(s)	2179
BstF5I	GGATG	6 cut(s)	123, 163, 577, 900, 1268, 1788
BstKTI	GATC	7 cut(s)	847, 855, 1715, 1753, 2194, 2209, 2269
BstMBI	GATC	7 cut(s)	844, 852, 1712, 1750, 2191, 2206, 2266
BstMWI	GCNNNNNNNGC	7 cut(s)	836, 958, 1284, 1388, 2255, 2299, 2404
BstNI	CCWGG	4 cut(s)	247, 1228, 1521, 1765
BstNSI	RCATGY	1 cut(s)	1788
BstPI	GGTNACC	1 cut(s)	658
BstSFI	CTRYAG	3 cut(s)	135, 1456, 2250
BstSLI	GKGCMC	3 cut(s)	165, 1403, 1453
BstV1I	GCAGC	7 cut(s)	50, 213, 301, 315, 1442, 1747, 2032
BstV2I	GAAGAC	2 cut(s)	362, 929
BstXI	CCANNNNNNTGG	1 cut(s)	1038
Bsu36I	CCTNAGG	2 cut(s)	396, 1917
BsuI	GTATCC	1 cut(s)	1639
BtgI	CCRYGG	1 cut(s)	165
BtgZI	GCGATG	2 cut(s)	321, 534
BtsCI	GGATG	6 cut(s)	123, 163, 577, 900, 1268, 1788
BtsI	GCAGTG	3 cut(s)	586, 882, 2360
BtsIMutI	CAGTG	6 cut(s)	586, 882, 1444, 1557, 1942, 2360
BveI	ACCTGC	2 cut(s)	1004, 1918
Cac8I	GCNNGC	7 cut(s)	705, 837, 924, 1276, 1453, 1786, 1848
CciI	TCATGA	2 cut(s)	2076, 2149
Cfr10I	RCCGGY	2 cut(s)	1130, 1846
Cfr13I	GGNCC	4 cut(s)	890, 988, 1324, 2424
Cfr9I	CCCGGG	1 cut(s)	265
CseI	GACGC	3 cut(s)	205, 293, 1035
CsiI	ACCWGGT	1 cut(s)	1519
Csp6I	GTAC	5 cut(s)	945, 1066, 1352, 1737, 2032
CspAI	ACCGGT	1 cut(s)	1130
CspCI	CAANNNNNGTGG	2 cut(s)	982, 1017
CviQI	GTAC	5 cut(s)	945, 1066, 1352, 1737, 2032
DdeI	CTNAG	9 cut(s)	318, 360, 396, 747, 798, 831, 1740, 1917, 2089
DpnI	GATC	7 cut(s)	846, 854, 1714, 1752, 2193, 2208, 2268
DpnII	GATC	7 cut(s)	844, 852, 1712, 1750, 2191, 2206, 2266
DraIII	CACNNNGTG	1 cut(s)	1798
DrdI	GACNNNNNNGTC	1 cut(s)	1304
DseDI	GACNNNNNNGTC	1 cut(s)	1304
EaeI	YGGCCR	3 cut(s)	1040, 1423, 1844
Eam1104I	CTCTTC	5 cut(s)	345, 1014, 1188, 2225, 2424
EarI	CTCTTC	5 cut(s)	345, 1014, 1188, 2225, 2424
Eco130I	CCWWGG	3 cut(s)	669, 1466, 2180
Eco31I	GGTCTC	1 cut(s)	1510
Eco57I	CTGAAG	3 cut(s)	477, 624, 1914
Eco81I	CCTNAGG	2 cut(s)	396, 1917
Eco88I	CYCGRG	2 cut(s)	265, 980
Eco91I	GGTNACC	1 cut(s)	658
EcoNI	CCTNNNNNAGG	1 cut(s)	2179
EcoO109I	RGGNCCY	1 cut(s)	988
EcoO65I	GGTNACC	1 cut(s)	658
EcoRI	GAATTC	2 cut(s)	493, 1374
EcoRII	CCWGG	4 cut(s)	245, 1226, 1519, 1763
EcoT14I	CCWWGG	3 cut(s)	669, 1466, 2180
EcoT22I	ATGCAT	1 cut(s)	1790
ErhI	CCWWGG	3 cut(s)	669, 1466, 2180
Esp3I	CGTCTC	1 cut(s)	2298
FaqI	GGGAC	1 cut(s)	963
FauI	CCCGC	1 cut(s)	1460
FbaI	TGATCA	1 cut(s)	844
FblI	GTMKAC	1 cut(s)	2094
Fnu4HI	GCNGC	9 cut(s)	64, 202, 304, 315, 1456, 1761, 2046, 2049, 2423
FokI	GGATG	6 cut(s)	130, 170, 584, 887, 1275, 1775
Fsp4HI	GCNGC	9 cut(s)	64, 202, 304, 315, 1456, 1761, 2046, 2049, 2423
FspBI	CTAG	1 cut(s)	24
GluI	GCNGC	9 cut(s)	64, 202, 304, 315, 1456, 1761, 2046, 2049, 2423
GsaI	CCCAGC	3 cut(s)	891, 1568, 1624
GsuI	CTGGAG	3 cut(s)	1533, 2085, 2351
HapII	CCGG	7 cut(s)	51, 266, 964, 1131, 1152, 1422, 1847
HgaI	GACGC	3 cut(s)	205, 293, 1035
Hin1I	GRCGYC	2 cut(s)	216, 1027
HincII	GTYRAC	1 cut(s)	795
HindII	GTYRAC	1 cut(s)	795
HindIII	AAGCTT	5 cut(s)	1088, 1276, 1487, 2222, 2291
HpaII	CCGG	7 cut(s)	51, 266, 964, 1131, 1152, 1422, 1847
HphI	GGTGA	8 cut(s)	67, 281, 539, 640, 647, 1145, 1580, 1969
Hpy166II	GTNNAC	6 cut(s)	185, 795, 1241, 1444, 2032, 2095
Hpy188III	TCNNGA	9 cut(s)	386, 931, 980, 1013, 1217, 1916, 2077, 2102, 2150
Hpy8I	GTNNAC	6 cut(s)	185, 795, 1241, 1444, 2032, 2095
Hpy99I	CGWCG	2 cut(s)	83, 215
HpyAV	CCTTC	8 cut(s)	466, 643, 817, 1010, 1426, 1472, 1591, 2285
HpyCH4III	ACNGT	7 cut(s)	73, 79, 622, 1209, 1356, 1448, 1651
HpyCH4IV	ACGT	5 cut(s)	210, 1237, 1819, 1951, 2372
HpyF10VI	GCNNNNNNNGC	7 cut(s)	836, 958, 1284, 1388, 2255, 2299, 2404
HpyF3I	CTNAG	9 cut(s)	318, 360, 396, 747, 798, 831, 1740, 1917, 2089
HpySE526I	ACGT	5 cut(s)	210, 1237, 1819, 1951, 2372
Hsp92I	GRCGYC	2 cut(s)	216, 1027
KroI	GCCGGC	1 cut(s)	1846
KroNI	GCCGGC	1 cut(s)	1848
Ksp22I	TGATCA	1 cut(s)	844
Kzo9I	GATC	7 cut(s)	844, 852, 1712, 1750, 2191, 2206, 2266
LguI	GCTCTTC	1 cut(s)	1188
LmnI	GCTCC	5 cut(s)	71, 193, 754, 1498, 1918
Lsp1109I	GCAGC	7 cut(s)	50, 213, 301, 315, 1442, 1747, 2032
LweI	GCATC	3 cut(s)	1117, 1797, 2340
MabI	ACCWGGT	1 cut(s)	1519
MaeI	CTAG	1 cut(s)	24
MaeII	ACGT	5 cut(s)	210, 1237, 1819, 1951, 2372
MaeIII	GTNAC	8 cut(s)	73, 233, 269, 658, 857, 1126, 1957, 2439
MalI	GATC	7 cut(s)	846, 854, 1714, 1752, 2193, 2208, 2268
MboI	GATC	7 cut(s)	844, 852, 1712, 1750, 2191, 2206, 2266
MfeI	CAATTG	2 cut(s)	1032, 2454
MhlI	GDGCHC	6 cut(s)	165, 963, 1183, 1403, 1453, 1944
MlsI	TGGCCA	1 cut(s)	1042
MluNI	TGGCCA	1 cut(s)	1042
MlyI	GAGTC	9 cut(s)	376, 461, 683, 818, 943, 2090, 2171, 2441, 2447
MmeI	TCCRAC	3 cut(s)	732, 1240, 2415
Mox20I	TGGCCA	1 cut(s)	1042
Mph1103I	ATGCAT	1 cut(s)	1790
MroNI	GCCGGC	1 cut(s)	1846
MroXI	GAANNNNTTC	1 cut(s)	1237
MscI	TGGCCA	1 cut(s)	1042
MseI	TTAA	7 cut(s)	624, 1101, 1880, 1989, 2169, 2226, 2461
MslI	CAYNNNNRTG	1 cut(s)	80
Msp20I	TGGCCA	1 cut(s)	1042
MspA1I	CMGCKG	1 cut(s)	1455
MspCI	CTTAAG	1 cut(s)	2225
MspI	CCGG	7 cut(s)	51, 266, 964, 1131, 1152, 1422, 1847
MunI	CAATTG	2 cut(s)	1032, 2454
Mva1269I	GAATGC	1 cut(s)	1594
MvaI	CCWGG	4 cut(s)	247, 1228, 1521, 1765
MwoI	GCNNNNNNNGC	7 cut(s)	836, 958, 1284, 1388, 2255, 2299, 2404
NaeI	GCCGGC	1 cut(s)	1848
NciI	CCSGG	6 cut(s)	52, 266, 267, 965, 1152, 1422
NdeII	GATC	7 cut(s)	844, 852, 1712, 1750, 2191, 2206, 2266
NgoMIV	GCCGGC	1 cut(s)	1846
NlaIV	GGNNCC	4 cut(s)	990, 1326, 1464, 1866
NmuCI	GTSAC	5 cut(s)	73, 233, 269, 1957, 2439
NsiI	ATGCAT	1 cut(s)	1790
NspI	RCATGY	1 cut(s)	1788
NspV	TTCGAA	2 cut(s)	940, 1691
OliI	CACNNNNGTG	1 cut(s)	80
PaeI	GCATGC	1 cut(s)	1788
PagI	TCATGA	2 cut(s)	2076, 2149
PaqCI	CACCTGC	1 cut(s)	1004
PciSI	GCTCTTC	1 cut(s)	1188
PcsI	WCGNNNNNNNCGW	2 cut(s)	2275, 2304
PctI	GAATGC	1 cut(s)	1594
PdiI	GCCGGC	1 cut(s)	1848
PdmI	GAANNNNTTC	1 cut(s)	1237
PfeI	GAWTC	2 cut(s)	545, 2271
PflFI	GACNNNGTC	1 cut(s)	1963
PfoI	TCCNGGA	1 cut(s)	50
PinAI	ACCGGT	1 cut(s)	1130
PkrI	GCNGC	9 cut(s)	65, 203, 305, 316, 1457, 1762, 2047, 2050, 2424
PleI	GAGTC	9 cut(s)	376, 461, 682, 817, 942, 2090, 2170, 2440, 2446
PpsI	GAGTC	9 cut(s)	376, 461, 682, 817, 942, 2090, 2170, 2440, 2446
Psp1406I	AACGTT	1 cut(s)	1237
Psp6I	CCWGG	4 cut(s)	245, 1226, 1519, 1763
PspEI	GGTNACC	1 cut(s)	658
PspFI	CCCAGC	3 cut(s)	887, 1564, 1620
PspGI	CCWGG	4 cut(s)	245, 1226, 1519, 1763
PspN4I	GGNNCC	4 cut(s)	990, 1326, 1464, 1866
PspPI	GGNCC	4 cut(s)	890, 988, 1324, 2424
PstI	CTGCAG	1 cut(s)	1460
PsyI	GACNNNGTC	1 cut(s)	1963
RsaI	GTAC	5 cut(s)	946, 1067, 1353, 1738, 2033
RsaNI	GTAC	5 cut(s)	945, 1066, 1352, 1737, 2032
RseI	CAYNNNNRTG	1 cut(s)	80
SapI	GCTCTTC	1 cut(s)	1188
SaqAI	TTAA	7 cut(s)	624, 1101, 1880, 1989, 2169, 2226, 2461
SatI	GCNGC	9 cut(s)	64, 202, 304, 315, 1456, 1761, 2046, 2049, 2423
Sau3AI	GATC	7 cut(s)	844, 852, 1712, 1750, 2191, 2206, 2266
Sau96I	GGNCC	4 cut(s)	890, 988, 1324, 2424
SchI	GAGTC	9 cut(s)	376, 461, 683, 818, 943, 2090, 2171, 2441, 2447
SduI	GDGCHC	6 cut(s)	165, 963, 1183, 1403, 1453, 1944
SexAI	ACCWGGT	1 cut(s)	1519
SfaNI	GCATC	3 cut(s)	1117, 1797, 2340
SfcI	CTRYAG	3 cut(s)	135, 1456, 2250
SfuI	TTCGAA	2 cut(s)	940, 1691
SmaI	CCCGGG	1 cut(s)	267
SmiMI	CAYNNNNRTG	1 cut(s)	80
SmlI	CTYRAG	4 cut(s)	384, 1347, 2225, 2444
SmoI	CTYRAG	4 cut(s)	384, 1347, 2225, 2444
SphI	GCATGC	1 cut(s)	1788
SsiI	CCGC	5 cut(s)	525, 1453, 2049, 2258, 2422
SspMI	CTAG	1 cut(s)	24
StyI	CCWWGG	3 cut(s)	669, 1466, 2180
TaaI	ACNGT	7 cut(s)	73, 79, 622, 1209, 1356, 1448, 1651
TaiI	ACGT	5 cut(s)	213, 1240, 1822, 1954, 2375
TaqI	TCGA	6 cut(s)	470, 940, 1691, 2269, 2278, 2348
TatI	WGTACW	2 cut(s)	1351, 1736
TauI	GCSGC	2 cut(s)	2051, 2425
TfiI	GAWTC	2 cut(s)	545, 2271
Tru1I	TTAA	7 cut(s)	624, 1101, 1880, 1989, 2169, 2226, 2461
Tru9I	TTAA	7 cut(s)	624, 1101, 1880, 1989, 2169, 2226, 2461
TscAI	CASTG	6 cut(s)	586, 889, 1451, 1557, 1949, 2360
TseFI	GTSAC	5 cut(s)	73, 233, 269, 1957, 2439
TseI	GCWGC	7 cut(s)	63, 201, 303, 314, 1455, 1760, 2045
Tsp45I	GTSAC	5 cut(s)	73, 233, 269, 1957, 2439
TspDTI	ATGAA	6 cut(s)	889, 1175, 1189, 1356, 1610, 2093
TspGWI	ACGGA	4 cut(s)	182, 726, 730, 2049
TspMI	CCCGGG	1 cut(s)	265
TspRI	CASTG	6 cut(s)	586, 889, 1451, 1557, 1949, 2360
Tth111I	GACNNNGTC	1 cut(s)	1963
Vha464I	CTTAAG	1 cut(s)	2225
XagI	CCTNNNNNAGG	1 cut(s)	2179
XapI	RAATTY	3 cut(s)	493, 1374, 2067
XceI	RCATGY	1 cut(s)	1788
XcmI	CCANNNNNNNNNTGG	2 cut(s)	151, 1761
XmaI	CCCGGG	1 cut(s)	265
XmiI	GTMKAC	1 cut(s)	2094
XmnI	GAANNNNTTC	1 cut(s)	1237
XspI	CTAG	1 cut(s)	24
Zsp2I	ATGCAT	1 cut(s)	1790

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.