Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0007018

Physical Location & Seq

Genomic Coordinates Forward (+)

39272650 .. 39278317

Gene Structure 5668 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG316600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2001 bp

ATGGCGTTAGGGAAGTATAGTAGAGTTGATAATAGGAGGTCGGCGTCGAGTTACTGCTCGACGGTGACCATTGTGGTGTTTGTGGCATTGTGCTTGGTGGGGGTTTGGATGATGACGTCGTCGTCGGTGGTGCCGGTTCAGAATGTAGATGTAGGTCAGGAGAACAAGAGTGAGGTGAAGGAGCAAGTGATTGAGACCAATGAGGGGAATAACAACAGGCAGTTTGAAGATAACCCGGGGGATTTACCGGAGGATGCGACGAAAGGAGATAACAATGAGGGTGCTACTCAGGTGGAAGAGAAGCCCGAGGTGAAAACTGAAGAGAAGGTTGAGGAGAAAACTGAAGAGAAGGTTGAGGAGAAAACAGAAGATGGGGCGAAAACTGAAACGGAAGATGGAGGAAGTAAGACAGAGGAGGTAGAGTCTAAGGTGGAAAATGATGAATCAAATTCGGAAGATGGAGAGAAGAAAAGTGATGGTGACGATGAGAAAAAGAATGATTTGGGTGAGGGTGACAATGAAAAGAGATCGGATGATGACAATGAGAAGAAAACGGAGAATTCTGATGAAACAAAGGATGCGGAGAAGGAGAATATTCAGATTGACGAGAAAGTGGAAAAAACTGATAAGGAGCAAGATAGTGAGAAATCGGATAATGGGCAGACTGTAAACCAGACTTCAAATGAGGTATTTCCTTCTGTTGCTCAGTCAGAGCTTTTGAATGAGACTGCAACCCAAAATGGGTCATGGTCAACTCAGTCGACAGAGTCAAAGAATGAGAAGGAGGCTCAACGTTCTTCTGACCAGCAAATTGATTACAATTGGAAACTTTGTAATTCAACTGCTGGGCCTGATTTCATCCCATGCCTTGACAATTTGCAAGCCATTAGGAGTCTTCACAGTACCAAGCATTATGAACATCGGGAGAGGCACTGTCCGGAGGAGCCTCCCACCTGCCTCCTTCCTCTTCCAGAAGGATATAAACGCCCAATTGAGTGGCCAATGAGCAGGGAAAAGATATGGTACTATAATGTCCCCCATACCAAACTTGCTCAAGTTAAGGGGCACCAGAACTGGGTCAAAGTCACTGGCGAATACCTTACTTTCCCTGGTGGTGGAACACAATTCAAGCATGGTGCTCTTCATTATATAGATTGGCTACAAGAGTCTGTTTCTGATATTGCCTGGGGAAAACGATCTCGTGTCATATTAGATGTTGGATGTGGGGTTGCAAGCTTTGGAGGATATCAATTTGACAGAGATGTCCTAACAATGTCCTTTGCCCCAAAAGATGAGCATGAAGCTCAAGTGCAGTTTGCACTTGAAAGAGGAATTCCTGCTATATCTGCTGTGATGGGCACACAGAGACTTCCCTATCCTAGCAAAGTTTTTGATGTTGTCCACTGTGCCCGCTGCAGGGTTCCCTGGCATATAGAAGGTGGTAAGCTTCTATTAGAGCTGAATCGTGTGTTGAGACCTGGTGGTTTCTTTGTGTGGTCTGCTACCCCAGTATATCAGAAGAAACGTGAAGACGTTGAAATATGGGCAGCCATGAAGGAACTAACAGAGAAGATATGTTGGGAAGTTGTCTCAATTAATAAGGATACAATAAATGCAGTTGGTGCAGCTATATACAGAAAACCTACCACCAATGAATGTTACGAGCAAAGATCACAAAATGAGCCTCCTATCTGTGACAAGTCTGATGATCCGAATGCAGCATGGAAAGTACCATTACAAGCATGCTTGCACAAAGTTCCTGTAGATGCGTCAGAGCGTGGGTCTCAGTGGCCTGAGCAATGGCCAGCGAGGTTGGACAAGGTACCTTACTGGTTGTTAAGTTCACAGACTGGAGCTTACGGAAAACCAGCGCCTGAGGATTTCGCTGCAGACTATGAGCACTGGAAACGCGTGGTGAACAAGTCTTATTTAACTGGAATGGGCATTAACTGGTCATCTATTAGGAATGTCATGGACATGAGATCTGTTTATGGAGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0012505 GO:0016740 GO:0016741 GO:0031410 GO:0031982 GO:0031984 GO:0032259 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_29

Protein Analysis

666

Amino Acids

75.21

Weight (kDa)

4.89

Isoelectric Point (pI)

48.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_29	PF03141	285 - 666	5.3e-165	Putative S-adenosyl-L-methionine-dependent methyltransferase
Methyltransf_11	PF08241	404 - 498	5.6e-06	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007018)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64030
fragaria_vesca	FvH4_1g24543 FvH4_1g24543 FvH4_1g24543 FvH4_1g24543 FvH4_1g24543
malus_domestica	MD15G1134500.v1.1
prunus_persica	Prupe.4G273900_v2.0.a1 Prupe.4G273900_v2.0.a1
pyrus_communis	pycom15g12110 pycom505g00120
rosa_chinensis	RchiOBHm_Chr2g0121981
rosa_laevigata	RLG00000018644
rosa_multiflora	Rmu_sc0003880.1_g000014
rosa_roxburghii	Rroxscaffold_2G00122100
rosa_rugosa	Rorug02G0235700 Rorug02G0235800
rosa_samantha	Rh2AG292400 Rh2BG302900 Rh2CG281500 Rh2DG316600 Rh2DG316700 Rh4AG294200 Rh4BG300200
rosa_wichuraiana	Rw2G023450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	962
AasI	GACNNNNNNGTC	2 cut(s)	121, 1262
AatII	GACGTC	1 cut(s)	119
Acc36I	ACCTGC	1 cut(s)	962
Acc65I	GGTACC	1 cut(s)	1822
AccB1I	GGYRCC	3 cut(s)	130, 1065, 1822
AccI	GTMKAC	1 cut(s)	761
AccII	CGCG	1 cut(s)	1911
AccIII	TCCGGA	1 cut(s)	937
AciI	CCGC	2 cut(s)	581, 1411
AclI	AACGTT	1 cut(s)	793
AclWI	GGATC	1 cut(s)	1703
AcoI	YGGCCR	2 cut(s)	998, 1802
AcsI	RAATTY	3 cut(s)	448, 559, 1332
AcuI	CTGAAG	2 cut(s)	339, 363
AcyI	GRCGYC	2 cut(s)	44, 116
AfaI	GTAC	4 cut(s)	904, 1025, 1731, 1824
AfiI	CCNNNNNNNGG	6 cut(s)	204, 741, 1075, 1115, 1416, 1417
AflIII	ACRYGT	1 cut(s)	1909
AgsI	TTSAA	7 cut(s)	227, 681, 721, 840, 1129, 1325, 1538
AjnI	CCWGG	4 cut(s)	1108, 1184, 1424, 1477
AluBI	AGCT	7 cut(s)	715, 1236, 1304, 1447, 1459, 1628, 1856
AluI	AGCT	7 cut(s)	715, 1236, 1304, 1447, 1459, 1628, 1856
Alw21I	GWGCWC	2 cut(s)	1141, 1902
Alw26I	GTCTC	6 cut(s)	188, 719, 1360, 1468, 1594, 1788
AlwI	GGATC	1 cut(s)	1703
AlwNI	CAGNNNCTG	1 cut(s)	1874
Ama87I	CYCGRG	2 cut(s)	235, 305
Aor13HI	TCCGGA	1 cut(s)	937
AoxI	GGCC	4 cut(s)	848, 998, 1790, 1802
ApeKI	GCWGC	5 cut(s)	1413, 1547, 1625, 1718, 1886
ApoI	RAATTY	3 cut(s)	448, 559, 1332
AseI	ATTAAT	1 cut(s)	1596
Asp718I	GGTACC	1 cut(s)	1822
AspLEI	GCGC	1 cut(s)	1873
AspS9I	GGNCC	1 cut(s)	848
AsuC2I	CCSGG	2 cut(s)	236, 237
AsuHPI	GGTGA	7 cut(s)	76, 187, 322, 491, 518, 524, 1927
AvaI	CYCGRG	2 cut(s)	235, 305
AxyI	CCTNAGG	1 cut(s)	1875
BaeGI	GKGCMC	3 cut(s)	1068, 1361, 1411
BalI	TGGCCA	2 cut(s)	1000, 1804
BanI	GGYRCC	3 cut(s)	130, 1065, 1822
BauI	CACGAG	1 cut(s)	1200
BbsI	GAAGAC	2 cut(s)	887, 1536
Bbv12I	GWGCWC	2 cut(s)	1141, 1902
BbvI	GCAGC	5 cut(s)	1400, 1559, 1637, 1730, 1873
BccI	CCATC	5 cut(s)	365, 389, 452, 470, 1348
BciT130I	CCWGG	4 cut(s)	1110, 1186, 1426, 1479
BciVI	GTATCC	1 cut(s)	1597
BcnI	CCSGG	2 cut(s)	236, 237
BcoDI	GTCTC	6 cut(s)	188, 719, 1360, 1468, 1594, 1788
BfaI	CTAG	1 cut(s)	1380
BfmI	CTRYAG	3 cut(s)	1414, 1761, 1887
BfoI	RGCGCY	1 cut(s)	1874
BfuAI	ACCTGC	1 cut(s)	962
BfuI	GTATCC	1 cut(s)	1597
BglII	AGATCT	1 cut(s)	1982
BisI	GCNGC	5 cut(s)	1414, 1548, 1626, 1719, 1887
BlsI	GCNGC	5 cut(s)	1415, 1549, 1627, 1720, 1888
Bme1390I	CCNGG	6 cut(s)	236, 237, 1110, 1186, 1426, 1479
BmeT110I	CYCGRG	2 cut(s)	235, 305
BmgT120I	GGNCC	1 cut(s)	848
BmiI	GGNNCC	5 cut(s)	132, 945, 1067, 1422, 1824
BmrFI	CCNGG	6 cut(s)	236, 237, 1110, 1186, 1426, 1479
BmrI	ACTGGG	2 cut(s)	1084, 1502
BmsI	GCATC	3 cut(s)	244, 568, 1756
BmuI	ACTGGG	2 cut(s)	1084, 1502
BpiI	GAAGAC	2 cut(s)	887, 1536
BpmI	CTGGAG	1 cut(s)	1872
Bpu10I	CCTNAGC	1 cut(s)	1794
BpuEI	CTTGAG	2 cut(s)	1038, 1290
BpuMI	CCSGG	2 cut(s)	236, 237
BsaHI	GRCGYC	2 cut(s)	44, 116
BsaI	GGTCTC	3 cut(s)	188, 1468, 1788
BsaJI	CCNNGG	6 cut(s)	235, 236, 306, 1108, 1185, 1424
BsaWI	WCCGGW	2 cut(s)	247, 937
BsaXI	ACNNNNNCTCC	2 cut(s)	407, 437
Bsc4I	CCNNNNNNNGG	6 cut(s)	204, 741, 1075, 1115, 1416, 1417
Bse118I	RCCGGY	1 cut(s)	133
Bse1I	ACTGG	8 cut(s)	1079, 1093, 1508, 1835, 1855, 1907, 1939, 1955
Bse21I	CCTNAGG	1 cut(s)	1875
Bse3DI	GCAATG	1 cut(s)	1805
BseAI	TCCGGA	1 cut(s)	937
BseBI	CCWGG	4 cut(s)	1110, 1186, 1426, 1479
BseDI	CCNNGG	6 cut(s)	235, 236, 306, 1108, 1185, 1424
BseGI	GGATG	6 cut(s)	114, 259, 538, 583, 858, 1226
BseLI	CCNNNNNNNGG	6 cut(s)	204, 741, 1075, 1115, 1416, 1417
BseMI	GCAATG	1 cut(s)	1805
BseMII	CTCAG	6 cut(s)	302, 719, 770, 1785, 1799, 1866
BseNI	ACTGG	8 cut(s)	1079, 1093, 1508, 1835, 1855, 1907, 1939, 1955
BseRI	GAGGAG	4 cut(s)	347, 371, 428, 956
BseSI	GKGCMC	3 cut(s)	1068, 1361, 1411
BseXI	GCAGC	5 cut(s)	1400, 1559, 1637, 1730, 1873
BseYI	CCCAGC	1 cut(s)	845
BsgI	GTGCAG	2 cut(s)	1331, 1644
Bsh1236I	CGCG	1 cut(s)	1911
BshFI	GGCC	4 cut(s)	850, 1000, 1792, 1804
BshNI	GGYRCC	3 cut(s)	130, 1065, 1822
BsiHKAI	GWGCWC	2 cut(s)	1141, 1902
BsiHKCI	CYCGRG	2 cut(s)	235, 305
BsiSI	CCGG	4 cut(s)	134, 236, 248, 938
BslFI	GGGAC	1 cut(s)	1019
BslI	CCNNNNNNNGG	6 cut(s)	204, 741, 1075, 1115, 1416, 1417
BsmAI	GTCTC	6 cut(s)	188, 719, 1360, 1468, 1594, 1788
BsmFI	GGGAC	1 cut(s)	1019
BsmI	GAATGC	1 cut(s)	1720
BsnI	GGCC	4 cut(s)	850, 1000, 1792, 1804
Bso31I	GGTCTC	3 cut(s)	188, 1468, 1788
BsoBI	CYCGRG	2 cut(s)	235, 305
Bsp1286I	GDGCHC	5 cut(s)	1068, 1141, 1361, 1411, 1902
Bsp13I	TCCGGA	1 cut(s)	937
Bsp143I	GATC	5 cut(s)	527, 1196, 1670, 1708, 1982
BspACI	CCGC	2 cut(s)	581, 1411
BspANI	GGCC	4 cut(s)	850, 1000, 1792, 1804
BspCNI	CTCAG	6 cut(s)	301, 718, 769, 1786, 1798, 1867
BspEI	TCCGGA	1 cut(s)	937
BspFNI	CGCG	1 cut(s)	1911
BspLI	GGNNCC	5 cut(s)	132, 945, 1067, 1422, 1824
BspMAI	CTGCAG	2 cut(s)	1418, 1891
BspMI	ACCTGC	1 cut(s)	962
BspPI	GGATC	1 cut(s)	1703
BspQI	GCTCTTC	1 cut(s)	1146
BspT107I	GGYRCC	3 cut(s)	130, 1065, 1822
BspTNI	GGTCTC	3 cut(s)	188, 1468, 1788
BsrDI	GCAATG	1 cut(s)	1805
BsrFI	RCCGGY	1 cut(s)	133
BsrI	ACTGG	8 cut(s)	1079, 1093, 1508, 1835, 1855, 1907, 1939, 1955
BssAI	RCCGGY	1 cut(s)	133
BssECI	CCNNGG	6 cut(s)	235, 236, 306, 1108, 1185, 1424
BssMI	GATC	5 cut(s)	527, 1196, 1670, 1708, 1982
BssNI	GRCGYC	2 cut(s)	44, 116
BssSI	CACGAG	1 cut(s)	1200
Bst2BI	CACGAG	1 cut(s)	1200
Bst2UI	CCWGG	4 cut(s)	1110, 1186, 1426, 1479
Bst4CI	ACNGT	5 cut(s)	64, 667, 902, 935, 1406
Bst6I	CTCTTC	5 cut(s)	291, 315, 339, 972, 1146
BstACI	GRCGYC	2 cut(s)	44, 116
BstAPI	GCANNNNNTGC	1 cut(s)	1622
BstC8I	GCNNGC	6 cut(s)	882, 1234, 1411, 1744, 1748, 1806
BstDEI	CTNAG	7 cut(s)	288, 426, 705, 756, 1785, 1794, 1875
BstEII	GGTNACC	1 cut(s)	64
BstF5I	GGATG	6 cut(s)	114, 259, 538, 583, 858, 1226
BstFNI	CGCG	1 cut(s)	1911
BstH2I	RGCGCY	1 cut(s)	1874
BstHHI	GCGC	1 cut(s)	1873
BstKTI	GATC	5 cut(s)	530, 1199, 1673, 1711, 1985
BstMAI	GTCTC	6 cut(s)	188, 719, 1360, 1468, 1594, 1788
BstMBI	GATC	5 cut(s)	527, 1196, 1670, 1708, 1982
BstMWI	GCNNNNNNNGC	2 cut(s)	1346, 1622
BstNI	CCWGG	4 cut(s)	1110, 1186, 1426, 1479
BstNSI	RCATGY	1 cut(s)	1746
BstPI	GGTNACC	1 cut(s)	64
BstSCI	CCNGG	6 cut(s)	234, 235, 1108, 1184, 1424, 1477
BstSFI	CTRYAG	3 cut(s)	1414, 1761, 1887
BstSLI	GKGCMC	3 cut(s)	1068, 1361, 1411
BstUI	CGCG	1 cut(s)	1911
BstV1I	GCAGC	5 cut(s)	1400, 1559, 1637, 1730, 1873
BstV2I	GAAGAC	2 cut(s)	887, 1536
BstX2I	RGATCY	1 cut(s)	1982
BstXI	CCANNNNNNTGG	1 cut(s)	996
BstYI	RGATCY	1 cut(s)	1982
Bsu36I	CCTNAGG	1 cut(s)	1875
BsuI	GTATCC	1 cut(s)	1597
BsuRI	GGCC	4 cut(s)	850, 1000, 1792, 1804
BtsCI	GGATG	6 cut(s)	114, 259, 538, 583, 858, 1226
BtsIMutI	CAGTG	5 cut(s)	931, 1086, 1402, 1793, 1900
BveI	ACCTGC	1 cut(s)	962
Cac8I	GCNNGC	6 cut(s)	882, 1234, 1411, 1744, 1748, 1806
CaiI	CAGNNNCTG	1 cut(s)	1874
CfoI	GCGC	1 cut(s)	1873
Cfr10I	RCCGGY	1 cut(s)	133
Cfr13I	GGNCC	1 cut(s)	848
Cfr9I	CCCGGG	1 cut(s)	235
CseI	GACGC	2 cut(s)	33, 1758
CsiI	ACCWGGT	1 cut(s)	1477
Csp6I	GTAC	4 cut(s)	903, 1024, 1730, 1823
CviAII	CATG	9 cut(s)	747, 864, 1133, 1298, 1552, 1722, 1743, 1972, 1978
CviQI	GTAC	4 cut(s)	903, 1024, 1730, 1823
DdeI	CTNAG	7 cut(s)	288, 426, 705, 756, 1785, 1794, 1875
DpnI	GATC	5 cut(s)	529, 1198, 1672, 1710, 1984
DpnII	GATC	5 cut(s)	527, 1196, 1670, 1708, 1982
DrdI	GACNNNNNNGTC	2 cut(s)	121, 1262
DseDI	GACNNNNNNGTC	2 cut(s)	121, 1262
EaeI	YGGCCR	2 cut(s)	998, 1802
Eam1104I	CTCTTC	5 cut(s)	291, 315, 339, 972, 1146
EarI	CTCTTC	5 cut(s)	291, 315, 339, 972, 1146
Eco31I	GGTCTC	3 cut(s)	188, 1468, 1788
Eco32I	GATATC	1 cut(s)	1247
Eco57I	CTGAAG	2 cut(s)	339, 363
Eco81I	CCTNAGG	1 cut(s)	1875
Eco88I	CYCGRG	2 cut(s)	235, 305
Eco91I	GGTNACC	1 cut(s)	64
EcoO65I	GGTNACC	1 cut(s)	64
EcoRI	GAATTC	2 cut(s)	559, 1332
EcoRII	CCWGG	4 cut(s)	1108, 1184, 1424, 1477
EcoRV	GATATC	1 cut(s)	1247
FaeI	CATG	9 cut(s)	750, 867, 1136, 1301, 1555, 1725, 1746, 1975, 1981
FaqI	GGGAC	1 cut(s)	1019
FatI	CATG	9 cut(s)	746, 863, 1132, 1297, 1551, 1721, 1742, 1971, 1977
FauI	CCCGC	1 cut(s)	1418
FblI	GTMKAC	1 cut(s)	761
Fnu4HI	GCNGC	5 cut(s)	1414, 1548, 1626, 1719, 1887
FokI	GGATG	6 cut(s)	121, 266, 545, 590, 845, 1233
Fsp4HI	GCNGC	5 cut(s)	1414, 1548, 1626, 1719, 1887
FspBI	CTAG	1 cut(s)	1380
GlaI	GCGC	1 cut(s)	1872
GluI	GCNGC	5 cut(s)	1414, 1548, 1626, 1719, 1887
GsaI	CCCAGC	1 cut(s)	849
GsuI	CTGGAG	1 cut(s)	1872
HaeII	RGCGCY	1 cut(s)	1874
HaeIII	GGCC	4 cut(s)	850, 1000, 1792, 1804
HapII	CCGG	4 cut(s)	134, 236, 248, 938
HgaI	GACGC	2 cut(s)	33, 1758
HhaI	GCGC	1 cut(s)	1873
Hin1I	GRCGYC	2 cut(s)	44, 116
Hin1II	CATG	9 cut(s)	750, 867, 1136, 1301, 1555, 1725, 1746, 1975, 1981
Hin6I	GCGC	1 cut(s)	1871
HinP1I	GCGC	1 cut(s)	1871
HincII	GTYRAC	2 cut(s)	753, 762
HindII	GTYRAC	2 cut(s)	753, 762
HindIII	AAGCTT	2 cut(s)	1234, 1445
HinfI	GANTC	6 cut(s)	422, 443, 767, 892, 1166, 1462
HpaII	CCGG	4 cut(s)	134, 236, 248, 938
HphI	GGTGA	7 cut(s)	76, 187, 322, 491, 518, 524, 1927
Hpy166II	GTNNAC	6 cut(s)	670, 753, 762, 1402, 1844, 1918
Hpy188III	TCNNGA	4 cut(s)	158, 923, 938, 971
Hpy8I	GTNNAC	6 cut(s)	670, 753, 762, 1402, 1844, 1918
Hpy99I	CGWCG	6 cut(s)	49, 64, 121, 124, 127, 262
HpyCH4III	ACNGT	5 cut(s)	64, 667, 902, 935, 1406
HpyCH4IV	ACGT	4 cut(s)	116, 793, 1525, 1533
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1346, 1622
HpyF3I	CTNAG	7 cut(s)	288, 426, 705, 756, 1785, 1794, 1875
HpySE526I	ACGT	4 cut(s)	116, 793, 1525, 1533
Hsp92I	GRCGYC	2 cut(s)	44, 116
Hsp92II	CATG	9 cut(s)	750, 867, 1136, 1301, 1555, 1725, 1746, 1975, 1981
HspAI	GCGC	1 cut(s)	1871
Kpn2I	TCCGGA	1 cut(s)	937
KpnI	GGTACC	1 cut(s)	1826
Kzo9I	GATC	5 cut(s)	527, 1196, 1670, 1708, 1982
LguI	GCTCTTC	1 cut(s)	1146
LmnI	GCTCC	4 cut(s)	181, 631, 943, 1853
Lsp1109I	GCAGC	5 cut(s)	1400, 1559, 1637, 1730, 1873
LweI	GCATC	3 cut(s)	244, 568, 1756
MabI	ACCWGGT	1 cut(s)	1477
MaeI	CTAG	1 cut(s)	1380
MaeII	ACGT	4 cut(s)	116, 793, 1525, 1533
MaeIII	GTNAC	7 cut(s)	50, 64, 479, 512, 1084, 1658, 1694
MalI	GATC	5 cut(s)	529, 1198, 1672, 1710, 1984
MboI	GATC	5 cut(s)	527, 1196, 1670, 1708, 1982
MfeI	CAATTG	2 cut(s)	820, 990
MflI	RGATCY	1 cut(s)	1982
MhlI	GDGCHC	5 cut(s)	1068, 1141, 1361, 1411, 1902
MlsI	TGGCCA	2 cut(s)	1000, 1804
MluI	ACGCGT	1 cut(s)	1909
MluNI	TGGCCA	2 cut(s)	1000, 1804
MlyI	GAGTC	4 cut(s)	431, 776, 901, 1175
MmeI	TCCRAC	2 cut(s)	1198, 1794
Mox20I	TGGCCA	2 cut(s)	1000, 1804
MroI	TCCGGA	1 cut(s)	937
MscI	TGGCCA	2 cut(s)	1000, 1804
MseI	TTAA	5 cut(s)	1059, 1596, 1838, 1931, 1947
MslI	CAYNNNNRTG	2 cut(s)	74, 1976
Msp20I	TGGCCA	2 cut(s)	1000, 1804
MspA1I	CMGCKG	1 cut(s)	1413
MspI	CCGG	4 cut(s)	134, 236, 248, 938
MspR9I	CCNGG	6 cut(s)	236, 237, 1110, 1186, 1426, 1479
MunI	CAATTG	2 cut(s)	820, 990
Mva1269I	GAATGC	1 cut(s)	1720
MvaI	CCWGG	4 cut(s)	1110, 1186, 1426, 1479
MvnI	CGCG	1 cut(s)	1911
MwoI	GCNNNNNNNGC	2 cut(s)	1346, 1622
NciI	CCSGG	2 cut(s)	236, 237
NdeII	GATC	5 cut(s)	527, 1196, 1670, 1708, 1982
NlaIII	CATG	9 cut(s)	750, 867, 1136, 1301, 1555, 1725, 1746, 1975, 1981
NlaIV	GGNNCC	5 cut(s)	132, 945, 1067, 1422, 1824
NmuCI	GTSAC	5 cut(s)	64, 479, 512, 1084, 1694
NspI	RCATGY	1 cut(s)	1746
PaeI	GCATGC	1 cut(s)	1746
PaqCI	CACCTGC	1 cut(s)	962
PciSI	GCTCTTC	1 cut(s)	1146
PctI	GAATGC	1 cut(s)	1720
PfeI	GAWTC	2 cut(s)	443, 1462
PflFI	GACNNNGTC	2 cut(s)	118, 766
PkrI	GCNGC	5 cut(s)	1415, 1549, 1627, 1720, 1888
PleI	GAGTC	4 cut(s)	430, 775, 900, 1174
PpsI	GAGTC	4 cut(s)	430, 775, 900, 1174
PshBI	ATTAAT	1 cut(s)	1596
Psp1406I	AACGTT	1 cut(s)	793
Psp6I	CCWGG	4 cut(s)	1108, 1184, 1424, 1477
PspEI	GGTNACC	1 cut(s)	64
PspFI	CCCAGC	1 cut(s)	845
PspGI	CCWGG	4 cut(s)	1108, 1184, 1424, 1477
PspN4I	GGNNCC	5 cut(s)	132, 945, 1067, 1422, 1824
PspPI	GGNCC	1 cut(s)	848
PstI	CTGCAG	2 cut(s)	1418, 1891
PstNI	CAGNNNCTG	1 cut(s)	1874
PsuI	RGATCY	1 cut(s)	1982
PsyI	GACNNNGTC	2 cut(s)	118, 766
RsaI	GTAC	4 cut(s)	904, 1025, 1731, 1824
RsaNI	GTAC	4 cut(s)	903, 1024, 1730, 1823
RseI	CAYNNNNRTG	2 cut(s)	74, 1976
SalI	GTCGAC	1 cut(s)	760
SapI	GCTCTTC	1 cut(s)	1146
SaqAI	TTAA	5 cut(s)	1059, 1596, 1838, 1931, 1947
SatI	GCNGC	5 cut(s)	1414, 1548, 1626, 1719, 1887
Sau3AI	GATC	5 cut(s)	527, 1196, 1670, 1708, 1982
Sau96I	GGNCC	1 cut(s)	848
SchI	GAGTC	4 cut(s)	431, 776, 901, 1175
ScrFI	CCNGG	6 cut(s)	236, 237, 1110, 1186, 1426, 1479
SduI	GDGCHC	5 cut(s)	1068, 1141, 1361, 1411, 1902
SexAI	ACCWGGT	1 cut(s)	1477
SfaNI	GCATC	3 cut(s)	244, 568, 1756
SfcI	CTRYAG	3 cut(s)	1414, 1761, 1887
SmaI	CCCGGG	1 cut(s)	237
SmiMI	CAYNNNNRTG	2 cut(s)	74, 1976
SmlI	CTYRAG	2 cut(s)	1053, 1305
SmoI	CTYRAG	2 cut(s)	1053, 1305
SphI	GCATGC	1 cut(s)	1746
SsiI	CCGC	2 cut(s)	581, 1411
SspI	AATATT	1 cut(s)	595
SspMI	CTAG	1 cut(s)	1380
StyD4I	CCNGG	6 cut(s)	234, 235, 1108, 1184, 1424, 1477
TaaI	ACNGT	5 cut(s)	64, 667, 902, 935, 1406
TaiI	ACGT	4 cut(s)	119, 796, 1528, 1536
TaqI	TCGA	3 cut(s)	47, 59, 761
TfiI	GAWTC	2 cut(s)	443, 1462
Tru1I	TTAA	5 cut(s)	1059, 1596, 1838, 1931, 1947
Tru9I	TTAA	5 cut(s)	1059, 1596, 1838, 1931, 1947
TscAI	CASTG	5 cut(s)	938, 1093, 1409, 1793, 1907
TseFI	GTSAC	5 cut(s)	64, 479, 512, 1084, 1694
TseI	GCWGC	5 cut(s)	1413, 1547, 1625, 1718, 1886
Tsp45I	GTSAC	5 cut(s)	64, 479, 512, 1084, 1694
TspDTI	ATGAA	9 cut(s)	456, 534, 582, 847, 930, 1133, 1314, 1568, 1668
TspGWI	ACGGA	3 cut(s)	404, 569, 1875
TspMI	CCCGGG	1 cut(s)	235
TspRI	CASTG	5 cut(s)	938, 1093, 1409, 1793, 1907
Tth111I	GACNNNGTC	2 cut(s)	118, 766
VspI	ATTAAT	1 cut(s)	1596
XapI	RAATTY	3 cut(s)	448, 559, 1332
XceI	RCATGY	1 cut(s)	1746
XmaI	CCCGGG	1 cut(s)	235
XmiI	GTMKAC	1 cut(s)	761
XspI	CTAG	1 cut(s)	1380
ZraI	GACGTC	1 cut(s)	117

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.