Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0007018

Physical Location & Seq

Genomic Coordinates Forward (+)

34856845 .. 34862281

Gene Structure 5437 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ49442

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2397 bp

ATGGCGTTAGGGAAGTATAGTAGAGTTGATAATAGGAGGTCGGCGTCGAGTTACTGCTCGACGGTGACCATTGTGGTGTTTGTGGCATTGTGCTTGGTGGGGGTTTGGATGATGACGTCGTCGTCGGTGGTGCCGGTTCAGAATGTAGATGTGGGTCAGGAGAACAAGAGTGAGGTGAAGGAGCAAGTGATTGAGACCAATGAGGGGAATAACAACAGGCAGTTTGAAGATAACCCCGGTGATTTACCGGAGGATGCGACGAAAGGAGATACCAATGAGGGTGCTGCTCAGGTGGAAGAGAAGCCCGAGGAGAAAACTGAAGAGAAGGTTGAGGAGAAAACAGAAGATGGGTTGAAAACTGAAACGGAAGATGGAGGAAGTAAGACAGAGGAGGGAGAGTCTAAGGTGGAAAATGATGAATCGAATTCGGAAGATGGAGAGAAGAAAAGTGATGGTGACGATGAGAAAAAGGATGATTCGGGCGAGGGTGACAATGAAAAGAAATCGGATGGTGACAATGAGAAGAAAACGGAGAATTCTGATGAAACAAAGGATGCGGAGAAGGAGAATATTCAGATTGACGAGAAAGTGGAAAAAACTGATAAGGAGCAAGATAGTGAGAAATCGGATAATGGACAGACTGTAAACCAGACTTCAAATGAGGTATTTCCTTCTGTTGCTCAGTCAGAGCTTTTGAATGAGACTGCAACCCAAAATGGGTCATGGTCAACTCAGTCGACAGAGTCAAAGAATGAGAAGGAGGCTCAACGTTCTTCTGACCAGCAAATTGATTACAATTGGAAACTTTGTAATTCAACTGCTGGGCCTGATTTCATCCCATGCCTTGACAATTTGCAAGCCATTAGGAGTCTTCACAGTACCAAGCATTATGAACATCGGGAGAGGCACTGTCCGGAGGAGCCTCCCACCTGCCTCCTTCCTCTTCCAGAAGGATATAAACGCCCAATTGAGTGGCCAATGAGCAGGGAAAAGATATGGTACTATAATGTCCCCCATACCAAACTTGCTCAAGTTAAGGGGCACCAGAACTGGGTCAAAGTCACTGGCGAATACCTTACTTTCCCTGGTGGTGGAACACAATTCAAGCATGGTGCTCTTCATTATATAGATTGGCTACAAGAGTCTGTTTCTGATATTGCCTGGGGAAAACGATCTCGTGTCATATTAGATGTTGGATGTGGGGTTGCAAGCTTTGGAGGATATCAATTTGACAGAGATGTCCTAACAATGTCCTTTGCCCCAAAAGATGAGCATGAAGCTCAAGTGCAGTTTGCACTTGAAAGAGGAATTCCTGCTATATCTGCTGTGATGGGCACACAGAGACTTCCCTATCCTAGCAAAGTTTTTGATGTTGTCCACTGTGCCCGCTGCAGGGTTCCCTGGCATATAGAAGGTGGTAAGCTTCTATTAGAGCTGAATCGTGTGTTGAGACCTGGTGGTTTCTTTGTGTGGTCTGCTACCCCAGTATATCAGAAGAAACGTGAAGACGTTGAAATATGGGCAGCCATGAAGGAACTAACAGAGAAGATATGTTGGGAACTTGTCTCAATTAATAAGGATACAATAAATGCAGTTGGTGCAGCTATATACAGAAAACCTACCACCAATGAATGTTACGAGCAAAGATCACAAAATGAGCCTCCTATCTGTGACAAGTCTGATGATCCGAATGCAGCATGGAAAGTACCATTACAAGCATGCTTGCACAAAGTTCCTGTAGATGCGTCAGAGCGTGGGTCTCAGTGGCCTGAGCAATGGCCAGCGAGGTTGGACAAGGTACCTTATTGGTTGTTAAGTTCGCAGACTGGAGCTTACGGAAAACCAGCGCCTGAGGATTTCTCTGCAGACTATGAGCACTGGAAACGCGTGGTGAACAAGTCTTATTTAACTGGAATGGGCATTAACTGGTCATCTATTAGGAATGTCATGGACATGAGATCTGTTTATGGAGGATTTGCTGCAGCTCTGAAAGATTTGAAAGTTTGGGTCATGAATATAGTCACAATAGACTCTCCAGATACCCTGCCCATAATTTATGAGCGAGGTCTATTTGGCATGTATCATGATTGGTGTGAATCATTTAGCACCTATCCCAGGTCTTATGATCTTCTCCACGCAGACCATCTGTTTTCCCTGCTCAAAAAGAGGTGCAATTTAGTTGCTGTAGTTGCAGAGGTTGATCGAATCCTTCGACCAGAGGGAAAACTTATAGTTCGGGACAATGTTGAGACTATTAATGAGCTGGAGAGGATGTTGAAGTCTATGCAGTGGGAGGTTCGCATGACCTATTCCAAGGACAAGGAGGGATTACTTTGTGTGCAGAAGTCCATGTGGCGGCCTAAAGAGTCGGAGACAGTCAAGTACGCCATTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0012505 GO:0016740 GO:0016741 GO:0031410 GO:0031982 GO:0031984 GO:0032259 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_29

Protein Analysis

798

Amino Acids

90.53

Weight (kDa)

5.04

Isoelectric Point (pI)

43.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_29	PF03141	277 - 782	3.9e-231	Putative S-adenosyl-L-methionine-dependent methyltransferase
Methyltransf_11	PF08241	396 - 490	7.2e-06	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007018)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64030
fragaria_vesca	FvH4_1g24543 FvH4_1g24543 FvH4_1g24543 FvH4_1g24543 FvH4_1g24543
malus_domestica	MD15G1134500.v1.1
prunus_persica	Prupe.4G273900_v2.0.a1 Prupe.4G273900_v2.0.a1
pyrus_communis	pycom15g12110 pycom505g00120
rosa_chinensis	RchiOBHm_Chr2g0121981
rosa_laevigata	RLG00000018644
rosa_multiflora	Rmu_sc0003880.1_g000014
rosa_roxburghii	Rroxscaffold_2G00122100
rosa_rugosa	Rorug02G0235700 Rorug02G0235800
rosa_samantha	Rh2AG292400 Rh2BG302900 Rh2CG281500 Rh2DG316600 Rh2DG316700 Rh4AG294200 Rh4BG300200
rosa_wichuraiana	Rw2G023450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	938
AasI	GACNNNNNNGTC	2 cut(s)	121, 1238
AatII	GACGTC	1 cut(s)	119
Acc36I	ACCTGC	1 cut(s)	938
Acc65I	GGTACC	1 cut(s)	1798
AccB1I	GGYRCC	3 cut(s)	130, 1041, 1798
AccI	GTMKAC	1 cut(s)	737
AccII	CGCG	1 cut(s)	1887
AccIII	TCCGGA	1 cut(s)	913
AciI	CCGC	3 cut(s)	557, 1387, 2356
AclI	AACGTT	1 cut(s)	769
AclWI	GGATC	1 cut(s)	1679
AcoI	YGGCCR	2 cut(s)	974, 1778
AcsI	RAATTY	3 cut(s)	424, 535, 1308
AcuI	CTGAAG	1 cut(s)	339
AcyI	GRCGYC	2 cut(s)	44, 116
AfaI	GTAC	5 cut(s)	880, 1001, 1707, 1800, 2384
AfiI	CCNNNNNNNGG	8 cut(s)	204, 717, 1051, 1091, 1392, 1393, 2115, 2355
AflIII	ACRYGT	1 cut(s)	1885
AjnI	CCWGG	5 cut(s)	1084, 1160, 1400, 1453, 2114
AluBI	AGCT	9 cut(s)	691, 1212, 1280, 1423, 1435, 1604, 1832, 1985, 2263
AluI	AGCT	9 cut(s)	691, 1212, 1280, 1423, 1435, 1604, 1832, 1985, 2263
Alw21I	GWGCWC	2 cut(s)	1117, 1878
Alw26I	GTCTC	8 cut(s)	188, 695, 1336, 1444, 1570, 1764, 2243, 2366
AlwI	GGATC	1 cut(s)	1679
AlwNI	CAGNNNCTG	1 cut(s)	1850
Ama87I	CYCGRG	1 cut(s)	305
Aor13HI	TCCGGA	1 cut(s)	913
AoxI	GGCC	5 cut(s)	824, 974, 1766, 1778, 2357
ApeKI	GCWGC	7 cut(s)	284, 1389, 1523, 1601, 1694, 1979, 1982
ApoI	RAATTY	3 cut(s)	424, 535, 1308
AseI	ATTAAT	2 cut(s)	1572, 2256
Asp718I	GGTACC	1 cut(s)	1798
AspLEI	GCGC	1 cut(s)	1849
AspS9I	GGNCC	1 cut(s)	824
AsuC2I	CCSGG	1 cut(s)	237
AsuHPI	GGTGA	7 cut(s)	76, 187, 251, 467, 500, 524, 1903
AvaI	CYCGRG	1 cut(s)	305
AxyI	CCTNAGG	1 cut(s)	1851
BaeGI	GKGCMC	3 cut(s)	1044, 1337, 1387
BalI	TGGCCA	2 cut(s)	976, 1780
BanI	GGYRCC	3 cut(s)	130, 1041, 1798
BauI	CACGAG	1 cut(s)	1176
BbsI	GAAGAC	2 cut(s)	863, 1512
Bbv12I	GWGCWC	2 cut(s)	1117, 1878
BbvI	GCAGC	7 cut(s)	271, 1376, 1535, 1613, 1706, 1966, 1994
BccI	CCATC	7 cut(s)	341, 365, 428, 446, 503, 1324, 2151
BciT130I	CCWGG	5 cut(s)	1086, 1162, 1402, 1455, 2116
BciVI	GTATCC	1 cut(s)	1573
BcnI	CCSGG	1 cut(s)	237
BcoDI	GTCTC	8 cut(s)	188, 695, 1336, 1444, 1570, 1764, 2243, 2366
BfaI	CTAG	1 cut(s)	1356
BfmI	CTRYAG	5 cut(s)	1390, 1737, 1863, 1980, 2184
BfoI	RGCGCY	1 cut(s)	1850
BfuAI	ACCTGC	1 cut(s)	938
BfuI	GTATCC	1 cut(s)	1573
BglII	AGATCT	1 cut(s)	1958
BisI	GCNGC	8 cut(s)	285, 1390, 1524, 1602, 1695, 1980, 1983, 2357
BlsI	GCNGC	8 cut(s)	286, 1391, 1525, 1603, 1696, 1981, 1984, 2358
Bme1390I	CCNGG	6 cut(s)	237, 1086, 1162, 1402, 1455, 2116
BmeT110I	CYCGRG	1 cut(s)	305
BmgT120I	GGNCC	1 cut(s)	824
BmiI	GGNNCC	5 cut(s)	132, 921, 1043, 1398, 1800
BmrFI	CCNGG	6 cut(s)	237, 1086, 1162, 1402, 1455, 2116
BmrI	ACTGGG	2 cut(s)	1060, 1478
BmsI	GCATC	3 cut(s)	244, 544, 1732
BmuI	ACTGGG	2 cut(s)	1060, 1478
BpiI	GAAGAC	2 cut(s)	863, 1512
BplI	GAGNNNNNCTC	2 cut(s)	1844, 1876
BpmI	CTGGAG	3 cut(s)	1848, 2019, 2285
Bpu10I	CCTNAGC	2 cut(s)	288, 1770
BpuEI	CTTGAG	2 cut(s)	1014, 1266
BpuMI	CCSGG	1 cut(s)	237
BsaHI	GRCGYC	2 cut(s)	44, 116
BsaI	GGTCTC	3 cut(s)	188, 1444, 1764
BsaJI	CCNNGG	7 cut(s)	235, 306, 1084, 1161, 1400, 2114, 2313
BsaWI	WCCGGW	2 cut(s)	247, 913
BsaXI	ACNNNNNCTCC	4 cut(s)	383, 413, 2258, 2288
Bsc4I	CCNNNNNNNGG	8 cut(s)	204, 717, 1051, 1091, 1392, 1393, 2115, 2355
Bse118I	RCCGGY	1 cut(s)	133
Bse1I	ACTGG	7 cut(s)	1055, 1069, 1484, 1831, 1883, 1915, 1931
Bse21I	CCTNAGG	1 cut(s)	1851
Bse3DI	GCAATG	2 cut(s)	1781, 2388
BseAI	TCCGGA	1 cut(s)	913
BseBI	CCWGG	5 cut(s)	1086, 1162, 1402, 1455, 2116
BseDI	CCNNGG	7 cut(s)	235, 306, 1084, 1161, 1400, 2114, 2313
BseGI	GGATG	8 cut(s)	114, 259, 478, 514, 559, 834, 1202, 2277
BseLI	CCNNNNNNNGG	8 cut(s)	204, 717, 1051, 1091, 1392, 1393, 2115, 2355
BseMI	GCAATG	2 cut(s)	1781, 2388
BseMII	CTCAG	6 cut(s)	302, 695, 746, 1761, 1775, 1842
BseNI	ACTGG	7 cut(s)	1055, 1069, 1484, 1831, 1883, 1915, 1931
BseRI	GAGGAG	4 cut(s)	323, 347, 404, 932
BseSI	GKGCMC	3 cut(s)	1044, 1337, 1387
BseXI	GCAGC	7 cut(s)	271, 1376, 1535, 1613, 1706, 1966, 1994
BseYI	CCCAGC	1 cut(s)	821
BsgI	GTGCAG	3 cut(s)	1307, 1620, 2360
Bsh1236I	CGCG	1 cut(s)	1887
BshFI	GGCC	5 cut(s)	826, 976, 1768, 1780, 2359
BshNI	GGYRCC	3 cut(s)	130, 1041, 1798
BsiHKAI	GWGCWC	2 cut(s)	1117, 1878
BsiHKCI	CYCGRG	1 cut(s)	305
BsiSI	CCGG	4 cut(s)	134, 237, 248, 914
BslFI	GGGAC	2 cut(s)	995, 2252
BslI	CCNNNNNNNGG	8 cut(s)	204, 717, 1051, 1091, 1392, 1393, 2115, 2355
BsmAI	GTCTC	8 cut(s)	188, 695, 1336, 1444, 1570, 1764, 2243, 2366
BsmFI	GGGAC	2 cut(s)	995, 2252
BsmI	GAATGC	1 cut(s)	1696
BsnI	GGCC	5 cut(s)	826, 976, 1768, 1780, 2359
Bso31I	GGTCTC	3 cut(s)	188, 1444, 1764
BsoBI	CYCGRG	1 cut(s)	305
Bsp1286I	GDGCHC	5 cut(s)	1044, 1117, 1337, 1387, 1878
Bsp13I	TCCGGA	1 cut(s)	913
Bsp143I	GATC	6 cut(s)	1172, 1646, 1684, 1958, 2125, 2200
BspACI	CCGC	3 cut(s)	557, 1387, 2356
BspANI	GGCC	5 cut(s)	826, 976, 1768, 1780, 2359
BspCNI	CTCAG	6 cut(s)	301, 694, 745, 1762, 1774, 1843
BspEI	TCCGGA	1 cut(s)	913
BspFNI	CGCG	1 cut(s)	1887
BspHI	TCATGA	2 cut(s)	2010, 2083
BspLI	GGNNCC	5 cut(s)	132, 921, 1043, 1398, 1800
BspMAI	CTGCAG	3 cut(s)	1394, 1867, 1984
BspMI	ACCTGC	1 cut(s)	938
BspPI	GGATC	1 cut(s)	1679
BspQI	GCTCTTC	1 cut(s)	1122
BspT107I	GGYRCC	3 cut(s)	130, 1041, 1798
BspTNI	GGTCTC	3 cut(s)	188, 1444, 1764
BsrDI	GCAATG	2 cut(s)	1781, 2388
BsrFI	RCCGGY	1 cut(s)	133
BsrI	ACTGG	7 cut(s)	1055, 1069, 1484, 1831, 1883, 1915, 1931
BssAI	RCCGGY	1 cut(s)	133
BssECI	CCNNGG	7 cut(s)	235, 306, 1084, 1161, 1400, 2114, 2313
BssMI	GATC	6 cut(s)	1172, 1646, 1684, 1958, 2125, 2200
BssNI	GRCGYC	2 cut(s)	44, 116
BssSI	CACGAG	1 cut(s)	1176
BssT1I	CCWWGG	1 cut(s)	2313
Bst2BI	CACGAG	1 cut(s)	1176
Bst2UI	CCWGG	5 cut(s)	1086, 1162, 1402, 1455, 2116
Bst4CI	ACNGT	6 cut(s)	64, 643, 878, 911, 1382, 2377
Bst6I	CTCTTC	4 cut(s)	291, 315, 948, 1122
BstACI	GRCGYC	2 cut(s)	44, 116
BstAPI	GCANNNNNTGC	1 cut(s)	1598
BstC8I	GCNNGC	6 cut(s)	858, 1210, 1387, 1720, 1724, 1782
BstDEI	CTNAG	7 cut(s)	288, 402, 681, 732, 1761, 1770, 1851
BstEII	GGTNACC	1 cut(s)	64
BstENI	CCTNNNNNAGG	1 cut(s)	2113
BstF5I	GGATG	8 cut(s)	114, 259, 478, 514, 559, 834, 1202, 2277
BstFNI	CGCG	1 cut(s)	1887
BstH2I	RGCGCY	1 cut(s)	1850
BstHHI	GCGC	1 cut(s)	1849
BstKTI	GATC	6 cut(s)	1175, 1649, 1687, 1961, 2128, 2203
BstMAI	GTCTC	8 cut(s)	188, 695, 1336, 1444, 1570, 1764, 2243, 2366
BstMBI	GATC	6 cut(s)	1172, 1646, 1684, 1958, 2125, 2200
BstMWI	GCNNNNNNNGC	3 cut(s)	1322, 1598, 2189
BstNI	CCWGG	5 cut(s)	1086, 1162, 1402, 1455, 2116
BstNSI	RCATGY	2 cut(s)	1722, 2080
BstPI	GGTNACC	1 cut(s)	64
BstSCI	CCNGG	6 cut(s)	235, 1084, 1160, 1400, 1453, 2114
BstSFI	CTRYAG	5 cut(s)	1390, 1737, 1863, 1980, 2184
BstSLI	GKGCMC	3 cut(s)	1044, 1337, 1387
BstUI	CGCG	1 cut(s)	1887
BstV1I	GCAGC	7 cut(s)	271, 1376, 1535, 1613, 1706, 1966, 1994
BstV2I	GAAGAC	2 cut(s)	863, 1512
BstX2I	RGATCY	1 cut(s)	1958
BstXI	CCANNNNNNTGG	1 cut(s)	972
BstYI	RGATCY	1 cut(s)	1958
Bsu36I	CCTNAGG	1 cut(s)	1851
BsuI	GTATCC	1 cut(s)	1573
BsuRI	GGCC	5 cut(s)	826, 976, 1768, 1780, 2359
BtsCI	GGATG	8 cut(s)	114, 259, 478, 514, 559, 834, 1202, 2277
BtsI	GCAGTG	1 cut(s)	2294
BtsIMutI	CAGTG	6 cut(s)	907, 1062, 1378, 1769, 1876, 2294
BveI	ACCTGC	1 cut(s)	938
Cac8I	GCNNGC	6 cut(s)	858, 1210, 1387, 1720, 1724, 1782
CaiI	CAGNNNCTG	1 cut(s)	1850
CciI	TCATGA	2 cut(s)	2010, 2083
CfoI	GCGC	1 cut(s)	1849
Cfr10I	RCCGGY	1 cut(s)	133
Cfr13I	GGNCC	1 cut(s)	824
CseI	GACGC	2 cut(s)	33, 1734
CsiI	ACCWGGT	1 cut(s)	1453
Csp6I	GTAC	5 cut(s)	879, 1000, 1706, 1799, 2383
CviQI	GTAC	5 cut(s)	879, 1000, 1706, 1799, 2383
DdeI	CTNAG	7 cut(s)	288, 402, 681, 732, 1761, 1770, 1851
DpnI	GATC	6 cut(s)	1174, 1648, 1686, 1960, 2127, 2202
DpnII	GATC	6 cut(s)	1172, 1646, 1684, 1958, 2125, 2200
DrdI	GACNNNNNNGTC	2 cut(s)	121, 1238
DseDI	GACNNNNNNGTC	2 cut(s)	121, 1238
EaeI	YGGCCR	2 cut(s)	974, 1778
Eam1104I	CTCTTC	4 cut(s)	291, 315, 948, 1122
EarI	CTCTTC	4 cut(s)	291, 315, 948, 1122
Eco130I	CCWWGG	1 cut(s)	2313
Eco31I	GGTCTC	3 cut(s)	188, 1444, 1764
Eco32I	GATATC	1 cut(s)	1223
Eco57I	CTGAAG	1 cut(s)	339
Eco81I	CCTNAGG	1 cut(s)	1851
Eco88I	CYCGRG	1 cut(s)	305
Eco91I	GGTNACC	1 cut(s)	64
EcoNI	CCTNNNNNAGG	1 cut(s)	2113
EcoO65I	GGTNACC	1 cut(s)	64
EcoRI	GAATTC	3 cut(s)	424, 535, 1308
EcoRII	CCWGG	5 cut(s)	1084, 1160, 1400, 1453, 2114
EcoRV	GATATC	1 cut(s)	1223
EcoT14I	CCWWGG	1 cut(s)	2313
ErhI	CCWWGG	1 cut(s)	2313
FaqI	GGGAC	2 cut(s)	995, 2252
FauI	CCCGC	1 cut(s)	1394
FblI	GTMKAC	1 cut(s)	737
Fnu4HI	GCNGC	8 cut(s)	285, 1390, 1524, 1602, 1695, 1980, 1983, 2357
FokI	GGATG	8 cut(s)	121, 266, 485, 521, 566, 821, 1209, 2284
Fsp4HI	GCNGC	8 cut(s)	285, 1390, 1524, 1602, 1695, 1980, 1983, 2357
FspBI	CTAG	1 cut(s)	1356
GlaI	GCGC	1 cut(s)	1848
GluI	GCNGC	8 cut(s)	285, 1390, 1524, 1602, 1695, 1980, 1983, 2357
GsaI	CCCAGC	1 cut(s)	825
GsuI	CTGGAG	3 cut(s)	1848, 2019, 2285
HaeII	RGCGCY	1 cut(s)	1850
HaeIII	GGCC	5 cut(s)	826, 976, 1768, 1780, 2359
HapII	CCGG	4 cut(s)	134, 237, 248, 914
HgaI	GACGC	2 cut(s)	33, 1734
HhaI	GCGC	1 cut(s)	1849
Hin1I	GRCGYC	2 cut(s)	44, 116
Hin6I	GCGC	1 cut(s)	1847
HinP1I	GCGC	1 cut(s)	1847
HincII	GTYRAC	2 cut(s)	729, 738
HindII	GTYRAC	2 cut(s)	729, 738
HindIII	AAGCTT	2 cut(s)	1210, 1421
HpaII	CCGG	4 cut(s)	134, 237, 248, 914
HphI	GGTGA	7 cut(s)	76, 187, 251, 467, 500, 524, 1903
Hpy166II	GTNNAC	5 cut(s)	646, 729, 738, 1378, 1894
Hpy188III	TCNNGA	8 cut(s)	158, 899, 914, 947, 2011, 2036, 2084, 2237
Hpy8I	GTNNAC	5 cut(s)	646, 729, 738, 1378, 1894
Hpy99I	CGWCG	6 cut(s)	49, 64, 121, 124, 127, 262
HpyCH4III	ACNGT	6 cut(s)	64, 643, 878, 911, 1382, 2377
HpyCH4IV	ACGT	4 cut(s)	116, 769, 1501, 1509
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1322, 1598, 2189
HpyF3I	CTNAG	7 cut(s)	288, 402, 681, 732, 1761, 1770, 1851
HpySE526I	ACGT	4 cut(s)	116, 769, 1501, 1509
Hsp92I	GRCGYC	2 cut(s)	44, 116
HspAI	GCGC	1 cut(s)	1847
Kpn2I	TCCGGA	1 cut(s)	913
KpnI	GGTACC	1 cut(s)	1802
Kzo9I	GATC	6 cut(s)	1172, 1646, 1684, 1958, 2125, 2200
LguI	GCTCTTC	1 cut(s)	1122
LmnI	GCTCC	4 cut(s)	181, 607, 919, 1829
Lsp1109I	GCAGC	7 cut(s)	271, 1376, 1535, 1613, 1706, 1966, 1994
LweI	GCATC	3 cut(s)	244, 544, 1732
MabI	ACCWGGT	1 cut(s)	1453
MaeI	CTAG	1 cut(s)	1356
MaeII	ACGT	4 cut(s)	116, 769, 1501, 1509
MaeIII	GTNAC	9 cut(s)	50, 64, 455, 488, 512, 1060, 1634, 1670, 2020
MalI	GATC	6 cut(s)	1174, 1648, 1686, 1960, 2127, 2202
MboI	GATC	6 cut(s)	1172, 1646, 1684, 1958, 2125, 2200
MfeI	CAATTG	2 cut(s)	796, 966
MflI	RGATCY	1 cut(s)	1958
MhlI	GDGCHC	5 cut(s)	1044, 1117, 1337, 1387, 1878
MlsI	TGGCCA	2 cut(s)	976, 1780
MluI	ACGCGT	1 cut(s)	1885
MluNI	TGGCCA	2 cut(s)	976, 1780
MlyI	GAGTC	6 cut(s)	407, 752, 877, 1151, 2024, 2375
MmeI	TCCRAC	3 cut(s)	1174, 1770, 2349
Mox20I	TGGCCA	2 cut(s)	976, 1780
MroI	TCCGGA	1 cut(s)	913
MscI	TGGCCA	2 cut(s)	976, 1780
MseI	TTAA	7 cut(s)	1035, 1572, 1814, 1907, 1923, 2256, 2395
MslI	CAYNNNNRTG	2 cut(s)	74, 1952
Msp20I	TGGCCA	2 cut(s)	976, 1780
MspA1I	CMGCKG	1 cut(s)	1389
MspI	CCGG	4 cut(s)	134, 237, 248, 914
MspR9I	CCNGG	6 cut(s)	237, 1086, 1162, 1402, 1455, 2116
MunI	CAATTG	2 cut(s)	796, 966
Mva1269I	GAATGC	1 cut(s)	1696
MvaI	CCWGG	5 cut(s)	1086, 1162, 1402, 1455, 2116
MvnI	CGCG	1 cut(s)	1887
MwoI	GCNNNNNNNGC	3 cut(s)	1322, 1598, 2189
NciI	CCSGG	1 cut(s)	237
NdeII	GATC	6 cut(s)	1172, 1646, 1684, 1958, 2125, 2200
NlaIV	GGNNCC	5 cut(s)	132, 921, 1043, 1398, 1800
NmuCI	GTSAC	7 cut(s)	64, 455, 488, 512, 1060, 1670, 2020
NspI	RCATGY	2 cut(s)	1722, 2080
PaeI	GCATGC	1 cut(s)	1722
PagI	TCATGA	2 cut(s)	2010, 2083
PaqCI	CACCTGC	1 cut(s)	938
PciSI	GCTCTTC	1 cut(s)	1122
PcsI	WCGNNNNNNNCGW	1 cut(s)	2209
PctI	GAATGC	1 cut(s)	1696
PfeI	GAWTC	5 cut(s)	419, 476, 1438, 2096, 2205
PflFI	GACNNNGTC	2 cut(s)	118, 742
PkrI	GCNGC	8 cut(s)	286, 1391, 1525, 1603, 1696, 1981, 1984, 2358
PleI	GAGTC	6 cut(s)	406, 751, 876, 1150, 2024, 2374
PpsI	GAGTC	6 cut(s)	406, 751, 876, 1150, 2024, 2374
PshBI	ATTAAT	2 cut(s)	1572, 2256
Psp1406I	AACGTT	1 cut(s)	769
Psp6I	CCWGG	5 cut(s)	1084, 1160, 1400, 1453, 2114
PspEI	GGTNACC	1 cut(s)	64
PspFI	CCCAGC	1 cut(s)	821
PspGI	CCWGG	5 cut(s)	1084, 1160, 1400, 1453, 2114
PspN4I	GGNNCC	5 cut(s)	132, 921, 1043, 1398, 1800
PspPI	GGNCC	1 cut(s)	824
PstI	CTGCAG	3 cut(s)	1394, 1867, 1984
PstNI	CAGNNNCTG	1 cut(s)	1850
PsuI	RGATCY	1 cut(s)	1958
PsyI	GACNNNGTC	2 cut(s)	118, 742
RsaI	GTAC	5 cut(s)	880, 1001, 1707, 1800, 2384
RsaNI	GTAC	5 cut(s)	879, 1000, 1706, 1799, 2383
RseI	CAYNNNNRTG	2 cut(s)	74, 1952
SalI	GTCGAC	1 cut(s)	736
SapI	GCTCTTC	1 cut(s)	1122
SaqAI	TTAA	7 cut(s)	1035, 1572, 1814, 1907, 1923, 2256, 2395
SatI	GCNGC	8 cut(s)	285, 1390, 1524, 1602, 1695, 1980, 1983, 2357
Sau3AI	GATC	6 cut(s)	1172, 1646, 1684, 1958, 2125, 2200
Sau96I	GGNCC	1 cut(s)	824
SchI	GAGTC	6 cut(s)	407, 752, 877, 1151, 2024, 2375
ScrFI	CCNGG	6 cut(s)	237, 1086, 1162, 1402, 1455, 2116
SduI	GDGCHC	5 cut(s)	1044, 1117, 1337, 1387, 1878
SexAI	ACCWGGT	1 cut(s)	1453
SfaNI	GCATC	3 cut(s)	244, 544, 1732
SfcI	CTRYAG	5 cut(s)	1390, 1737, 1863, 1980, 2184
SmiMI	CAYNNNNRTG	2 cut(s)	74, 1952
SmlI	CTYRAG	2 cut(s)	1029, 1281
SmoI	CTYRAG	2 cut(s)	1029, 1281
SphI	GCATGC	1 cut(s)	1722
SsiI	CCGC	3 cut(s)	557, 1387, 2356
SspI	AATATT	1 cut(s)	571
SspMI	CTAG	1 cut(s)	1356
StyD4I	CCNGG	6 cut(s)	235, 1084, 1160, 1400, 1453, 2114
StyI	CCWWGG	1 cut(s)	2313
TaaI	ACNGT	6 cut(s)	64, 643, 878, 911, 1382, 2377
TaiI	ACGT	4 cut(s)	119, 772, 1504, 1512
TaqI	TCGA	6 cut(s)	47, 59, 422, 737, 2203, 2212
TauI	GCSGC	1 cut(s)	2359
TfiI	GAWTC	5 cut(s)	419, 476, 1438, 2096, 2205
Tru1I	TTAA	7 cut(s)	1035, 1572, 1814, 1907, 1923, 2256, 2395
Tru9I	TTAA	7 cut(s)	1035, 1572, 1814, 1907, 1923, 2256, 2395
TscAI	CASTG	6 cut(s)	914, 1069, 1385, 1769, 1883, 2294
TseFI	GTSAC	7 cut(s)	64, 455, 488, 512, 1060, 1670, 2020
TseI	GCWGC	7 cut(s)	284, 1389, 1523, 1601, 1694, 1979, 1982
Tsp45I	GTSAC	7 cut(s)	64, 455, 488, 512, 1060, 1670, 2020
TspGWI	ACGGA	3 cut(s)	380, 545, 1851
TspRI	CASTG	6 cut(s)	914, 1069, 1385, 1769, 1883, 2294
Tth111I	GACNNNGTC	2 cut(s)	118, 742
VspI	ATTAAT	2 cut(s)	1572, 2256
XagI	CCTNNNNNAGG	1 cut(s)	2113
XapI	RAATTY	3 cut(s)	424, 535, 1308
XceI	RCATGY	2 cut(s)	1722, 2080
XmiI	GTMKAC	1 cut(s)	737
XspI	CTAG	1 cut(s)	1356
ZraI	GACGTC	1 cut(s)	117

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.