Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

SuperScaffold_505

Orthogroup ID

OG0007018

Physical Location & Seq

Genomic Coordinates Reverse (-)

258961 .. 263087

Gene Structure 4127 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom505g00120.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2106 bp

ATGATGACCTCCTCCTCTGTAGTTCCCGTTCAAAATGTTGATGTGCCCCAGGAGAATAAGAGTGACCTCAACGAGCAGGACAGCAATGACATTGGCGTCAAGGAACAAGTGAGTGACACCAAAAACAGGCAATTTGAAGATAACCCCGGTGACTTACCTGATGACGCAACCAAAGGAGACAGTGATGGTGCTGCTCAGGGCGAAGACAAGGTAGAAGAGAAGTCTGAAGACTCTACTGCGGAGAGATTTGTGGAAAAGACTCAAGAGACGCCTGAGGAGAAGACTGAAGACAAGATTGAGGACAAGACCGAAGACAAGATTGAGGAGAAGACTGAAGACAAGAGTGAGGAGAAAACTGAAGATGGTGACTCTAAGGCGGAAAATGGAGAATTGAATTCTGAAGATGCAGAAAAAAAAAGCGATGGTGGTGAAAACGAGAGGAAGTCTGATTCCAGTGATAATGATAAGAAGTCGGATGATGACAGTGATAAAAAATTAGACAGCTCCGAAGAAATAAATGATACAGAAAAGGTGAATGGTCAGATAGAGGAGAAACTGGAGGTAACTGATACCAAGGAGGCAGATGGGGAGAAAAAGGAAAATGAGCAGGCCAAAAACGAAAGTTCAAATGAGGTATTCCCTTCTGTTGCTCAGTCAGAGCTGTTGAACGAGACTACAACTCAAAATGGTTCGTGGTCAACTCAATCGGCAGAGTCAAAGAACGAGAAGGAGGCTCAGCGTACTTCTAATCAGAAGACCAGTTACAACTGGAAAGTCTGCAATTCCACTGCTGGGCCTGATTTCATCCCCTGCCTTGACAATTTGCAAGCCATCAAGAGTCTTCGAAGTACCAAGCATTATGAGCACCGGGAGAGGCACTGTCCCGAAGAGGCTCCCACCTGCCTTCTTCCTCTCCCAGAAGGATATAGACGCTCAATTGAGTGGCCAACAAGCAGGGAAAAGTCTGTTCCTGATATTGCCTGGGGAAAACGTTCACGTGTTGTATTAGATGTTGGATGTGGAGTTGCAAGCTTTGGAGGCTTTCTCTTTGACAGAGATGTCCTTGCAATGTCCTTGGCCCCAAAAGATGAGCATGAAGCTCAAGTTCAGTTTGCACTTGAAAGAGGAATTCCAGCCATATCTGCTGTGATGGGCACAAAGAGACTTCCCTTCCCAGGCAAAGTTTTTGATGTTGTTCACTGTGCCCGCTGCAGGGTTCCTTGGCATATAGAAGGTGGTAAGCTTCTATTGGAGCTGAATCGTGTGTTGAGACCTGGTGGTTTCTTTGTGTGGTCTGCTACTCCAATATATCAGAAGCTGGCTGAAGATGTTGAAATATGGAAATCCATGAAGGAACTAACAAAAGCAATATGCTGGGAACTGTTGTCAATTAGTAAGGATACAATAAATGGAGTTGGTATTGCCATATACAAAAAGCCTACTTCGAATGAGTGCTATGAGAAAAGATCACAGAACGAGCCTCCTATCTGCACTACGTCTGATGAGCCAAATGCTGCCTGGAATGTGCCATTACAAGCATGCATGCACAAAGTGCCTGTAGATGCAACAGAACGTGGGTCTGAATGGCCTGAACAATGGCCATCGAGGTTGGACAAGACACCTTACTGGTTGTTAAATTCCCAAGTTGGTGTTTATGGAAAACCTGCTCCTGAGGATTTCACTGCAGACAATGAGCACTGGAAACGTGTGGTGACAAAGTCATACCTGAATGGAATGGGGATTAACTGGACATCTGTCCGGAATGTTATGGACATGAGAGCTGTGTATGGAGGATTTGCTGCCGCTGTGAAAGATTTGAAAATTTGGGTCATGAATGTGGTCTCAGTAGACTCTCCAGATACACTACCCATAATTTACGAGCGTGGTTTGTTTGTAGTTGCGGAGGTTGATCGAATTCTTCGACCTGAGGGAACCCTTATCGTGCGAGACGAGGTTGAGACTATTAATGAGCTGGAGAACATGGTGAGATCGATGCAGTGGGAGGTTCGCATGACCTATTCAAAGGACAAGGAGGGATTGCTCTGTGTGAAGAAGTCCATGTGGCGGCCCAAAGAGTTGGAGACACTCAAGTATGCCATCGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0012505 GO:0016740 GO:0016741 GO:0031410 GO:0031982 GO:0031984 GO:0032259 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_29

Protein Analysis

702

Amino Acids

79.03

Weight (kDa)

4.78

Isoelectric Point (pI)

45.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007018)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64030
fragaria_vesca	FvH4_1g24543 FvH4_1g24543 FvH4_1g24543 FvH4_1g24543 FvH4_1g24543
malus_domestica	MD15G1134500.v1.1
prunus_persica	Prupe.4G273900_v2.0.a1 Prupe.4G273900_v2.0.a1
pyrus_communis	pycom15g12110 pycom505g00120
rosa_chinensis	RchiOBHm_Chr2g0121981
rosa_laevigata	RLG00000018644
rosa_multiflora	Rmu_sc0003880.1_g000014
rosa_roxburghii	Rroxscaffold_2G00122100
rosa_rugosa	Rorug02G0235700 Rorug02G0235800
rosa_samantha	Rh2AG292400 Rh2BG302900 Rh2CG281500 Rh2DG316600 Rh2DG316700 Rh4AG294200 Rh4BG300200
rosa_wichuraiana	Rw2G023450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	908
AasI	GACNNNNNNGTC	2 cut(s)	95, 1058
Acc36I	ACCTGC	2 cut(s)	908, 1672
AccI	GTMKAC	1 cut(s)	1848
AccIII	TCCGGA	1 cut(s)	1758
AciI	CCGC	6 cut(s)	239, 377, 1207, 1803, 1901, 2065
AclI	AACGTT	1 cut(s)	991
AcoI	YGGCCR	2 cut(s)	944, 1598
AcsI	RAATTY	5 cut(s)	394, 1128, 1636, 1821, 1914
AcuI	CTGAAG	6 cut(s)	246, 306, 354, 378, 420, 1344
AcvI	CACGTG	1 cut(s)	998
AcyI	GRCGYC	2 cut(s)	96, 269
AdeI	CACNNNGTG	1 cut(s)	1552
AfaI	GTAC	2 cut(s)	742, 850
AfiI	CCNNNNNNNGG	6 cut(s)	126, 792, 1175, 1212, 1213, 2064
AflIII	ACRYGT	2 cut(s)	997, 1705
AgsI	TTSAA	9 cut(s)	32, 137, 394, 627, 667, 1121, 1334, 1819, 2022
AjnI	CCWGG	5 cut(s)	48, 980, 1174, 1273, 1517
AluBI	AGCT	9 cut(s)	504, 661, 1032, 1100, 1243, 1255, 1318, 1781, 1972
AluI	AGCT	9 cut(s)	504, 661, 1032, 1100, 1243, 1255, 1318, 1781, 1972
Alw21I	GWGCWC	2 cut(s)	867, 1698
Alw26I	GTCTC	9 cut(s)	171, 260, 665, 1156, 1264, 1846, 1941, 1952, 2075
AlwNI	CAGNNNCTG	1 cut(s)	1318
Aor13HI	TCCGGA	1 cut(s)	1758
AoxI	GGCC	7 cut(s)	609, 794, 944, 1077, 1586, 1598, 2066
ApeKI	GCWGC	4 cut(s)	191, 1209, 1514, 1799
ApoI	RAATTY	5 cut(s)	394, 1128, 1636, 1821, 1914
AseI	ATTAAT	1 cut(s)	1965
Asp700I	GAANNNNTTC	1 cut(s)	991
AspS9I	GGNCC	3 cut(s)	794, 1078, 2067
AsuC2I	CCSGG	2 cut(s)	147, 869
AsuHPI	GGTGA	6 cut(s)	161, 377, 440, 544, 1723, 1996
AsuII	TTCGAA	2 cut(s)	844, 1445
AxyI	CCTNAGG	3 cut(s)	273, 1671, 1926
BaeGI	GKGCMC	3 cut(s)	48, 1157, 1207
BalI	TGGCCA	2 cut(s)	946, 1600
BarI	GAAGNNNNNNTAC	2 cut(s)	746, 778
BbrPI	CACGTG	1 cut(s)	998
BbsI	GAAGAC	9 cut(s)	210, 234, 287, 294, 318, 335, 342, 761, 833
Bbv12I	GWGCWC	2 cut(s)	867, 1698
BbvI	GCAGC	4 cut(s)	178, 1196, 1501, 1786
BccI	CCATC	8 cut(s)	179, 356, 416, 578, 839, 1144, 1609, 2105
BciT130I	CCWGG	5 cut(s)	50, 982, 1176, 1275, 1519
BciVI	GTATCC	1 cut(s)	1393
BcnI	CCSGG	2 cut(s)	147, 869
BcoDI	GTCTC	9 cut(s)	171, 260, 665, 1156, 1264, 1846, 1941, 1952, 2075
BfmI	CTRYAG	4 cut(s)	18, 1210, 1557, 1683
BfuAI	ACCTGC	2 cut(s)	908, 1672
BfuI	GTATCC	1 cut(s)	1393
BisI	GCNGC	6 cut(s)	192, 1210, 1515, 1800, 1803, 2066
BlpI	GCTNAGC	1 cut(s)	735
BlsI	GCNGC	6 cut(s)	193, 1211, 1516, 1801, 1804, 2067
Bme1390I	CCNGG	7 cut(s)	50, 147, 869, 982, 1176, 1275, 1519
BmgT120I	GGNCC	3 cut(s)	794, 1078, 2067
BmiI	GGNNCC	4 cut(s)	894, 1080, 1218, 1933
BmrFI	CCNGG	7 cut(s)	50, 147, 869, 982, 1176, 1275, 1519
BmsI	GCATC	3 cut(s)	394, 1552, 1983
BoxI	GACNNNNGTC	1 cut(s)	1754
BpiI	GAAGAC	9 cut(s)	210, 234, 287, 294, 318, 335, 342, 761, 833
BplI	GAGNNNNNCTC	2 cut(s)	1029, 1061
BpmI	CTGGAG	3 cut(s)	578, 1839, 1994
Bpu10I	CCTNAGC	1 cut(s)	195
Bpu1102I	GCTNAGC	1 cut(s)	735
Bpu14I	TTCGAA	2 cut(s)	844, 1445
BpuEI	CTTGAG	3 cut(s)	246, 1086, 2072
BpuMI	CCSGG	2 cut(s)	147, 869
Bsa29I	ATCGAT	1 cut(s)	1991
BsaAI	YACGTR	1 cut(s)	998
BsaHI	GRCGYC	2 cut(s)	96, 269
BsaI	GGTCTC	2 cut(s)	1264, 1846
BsaJI	CCNNGG	7 cut(s)	48, 145, 573, 981, 1074, 1174, 1220
BsaWI	WCCGGW	1 cut(s)	1758
Bsc4I	CCNNNNNNNGG	6 cut(s)	126, 792, 1175, 1212, 1213, 2064
Bse1I	ACTGG	7 cut(s)	453, 561, 759, 773, 1631, 1703, 1751
Bse21I	CCTNAGG	3 cut(s)	273, 1671, 1926
Bse3DI	GCAATG	2 cut(s)	91, 1074
BseAI	TCCGGA	1 cut(s)	1758
BseBI	CCWGG	5 cut(s)	50, 982, 1176, 1275, 1519
BseCI	ATCGAT	1 cut(s)	1991
BseDI	CCNNGG	7 cut(s)	48, 145, 573, 981, 1074, 1174, 1220
BseGI	GGATG	3 cut(s)	481, 804, 1022
BseLI	CCNNNNNNNGG	6 cut(s)	126, 792, 1175, 1212, 1213, 2064
BseMI	GCAATG	2 cut(s)	91, 1074
BseMII	CTCAG	7 cut(s)	209, 264, 665, 749, 1662, 1857, 1917
BseNI	ACTGG	7 cut(s)	453, 561, 759, 773, 1631, 1703, 1751
BseRI	GAGGAG	5 cut(s)	4, 290, 338, 362, 563
BseSI	GKGCMC	3 cut(s)	48, 1157, 1207
BseXI	GCAGC	4 cut(s)	178, 1196, 1501, 1786
BseYI	CCCAGC	2 cut(s)	791, 1374
BsgI	GTGCAG	1 cut(s)	1474
BshFI	GGCC	7 cut(s)	611, 796, 946, 1079, 1588, 1600, 2068
BshVI	ATCGAT	1 cut(s)	1991
BsiHKAI	GWGCWC	2 cut(s)	867, 1698
BsiSI	CCGG	3 cut(s)	147, 868, 1759
BslFI	GGGAC	1 cut(s)	867
BslI	CCNNNNNNNGG	6 cut(s)	126, 792, 1175, 1212, 1213, 2064
BsmAI	GTCTC	9 cut(s)	171, 260, 665, 1156, 1264, 1846, 1941, 1952, 2075
BsmBI	CGTCTC	2 cut(s)	260, 1941
BsmFI	GGGAC	1 cut(s)	867
BsnI	GGCC	7 cut(s)	611, 796, 946, 1079, 1588, 1600, 2068
Bso31I	GGTCTC	2 cut(s)	1264, 1846
Bsp119I	TTCGAA	2 cut(s)	844, 1445
Bsp1286I	GDGCHC	5 cut(s)	48, 867, 1157, 1207, 1698
Bsp13I	TCCGGA	1 cut(s)	1758
Bsp143I	GATC	3 cut(s)	1466, 1909, 1988
Bsp1720I	GCTNAGC	1 cut(s)	735
BspACI	CCGC	6 cut(s)	239, 377, 1207, 1803, 1901, 2065
BspANI	GGCC	7 cut(s)	611, 796, 946, 1079, 1588, 1600, 2068
BspCNI	CTCAG	7 cut(s)	208, 265, 664, 748, 1663, 1856, 1918
BspDI	ATCGAT	1 cut(s)	1991
BspEI	TCCGGA	1 cut(s)	1758
BspHI	TCATGA	1 cut(s)	1830
BspLI	GGNNCC	4 cut(s)	894, 1080, 1218, 1933
BspMAI	CTGCAG	2 cut(s)	1214, 1687
BspMI	ACCTGC	2 cut(s)	908, 1672
BspT104I	TTCGAA	2 cut(s)	844, 1445
BspTNI	GGTCTC	2 cut(s)	1264, 1846
BsrDI	GCAATG	2 cut(s)	91, 1074
BsrI	ACTGG	7 cut(s)	453, 561, 759, 773, 1631, 1703, 1751
BssECI	CCNNGG	7 cut(s)	48, 145, 573, 981, 1074, 1174, 1220
BssMI	GATC	3 cut(s)	1466, 1909, 1988
BssNI	GRCGYC	2 cut(s)	96, 269
BssT1I	CCWWGG	3 cut(s)	573, 1074, 1220
Bst2UI	CCWGG	5 cut(s)	50, 982, 1176, 1275, 1519
Bst4CI	ACNGT	5 cut(s)	182, 485, 881, 1202, 1383
Bst6I	CTCTTC	2 cut(s)	210, 882
BstACI	GRCGYC	2 cut(s)	96, 269
BstAPI	GCANNNNNTGC	1 cut(s)	1552
BstBAI	YACGTR	1 cut(s)	998
BstBI	TTCGAA	2 cut(s)	844, 1445
BstC8I	GCNNGC	7 cut(s)	609, 828, 1030, 1207, 1320, 1540, 1544
BstDEI	CTNAG	8 cut(s)	195, 273, 372, 651, 735, 1671, 1843, 1926
BstF5I	GGATG	3 cut(s)	481, 804, 1022
BstKTI	GATC	3 cut(s)	1469, 1912, 1991
BstMAI	GTCTC	9 cut(s)	171, 260, 665, 1156, 1264, 1846, 1941, 1952, 2075
BstMBI	GATC	3 cut(s)	1466, 1909, 1988
BstMWI	GCNNNNNNNGC	4 cut(s)	862, 1038, 1142, 1552
BstNI	CCWGG	5 cut(s)	50, 982, 1176, 1275, 1519
BstNSI	RCATGY	2 cut(s)	1542, 1546
BstPAI	GACNNNNGTC	1 cut(s)	1754
BstSCI	CCNGG	7 cut(s)	48, 145, 867, 980, 1174, 1273, 1517
BstSFI	CTRYAG	4 cut(s)	18, 1210, 1557, 1683
BstSLI	GKGCMC	3 cut(s)	48, 1157, 1207
BstV1I	GCAGC	4 cut(s)	178, 1196, 1501, 1786
BstV2I	GAAGAC	9 cut(s)	210, 234, 287, 294, 318, 335, 342, 761, 833
BstXI	CCANNNNNNTGG	1 cut(s)	2077
Bsu15I	ATCGAT	1 cut(s)	1991
Bsu36I	CCTNAGG	3 cut(s)	273, 1671, 1926
BsuI	GTATCC	1 cut(s)	1393
BsuRI	GGCC	7 cut(s)	611, 796, 946, 1079, 1588, 1600, 2068
BsuTUI	ATCGAT	1 cut(s)	1991
BtgZI	GCGATG	2 cut(s)	435, 2083
BtsCI	GGATG	3 cut(s)	481, 804, 1022
BtsI	GCAGTG	3 cut(s)	786, 1680, 2003
BtsIMutI	CAGTG	9 cut(s)	187, 460, 490, 786, 877, 1198, 1680, 1696, 2003
BveI	ACCTGC	2 cut(s)	908, 1672
Cac8I	GCNNGC	7 cut(s)	609, 828, 1030, 1207, 1320, 1540, 1544
CaiI	CAGNNNCTG	1 cut(s)	1318
CciI	TCATGA	1 cut(s)	1830
Cfr13I	GGNCC	3 cut(s)	794, 1078, 2067
ClaI	ATCGAT	1 cut(s)	1991
CseI	GACGC	4 cut(s)	85, 173, 277, 939
CsiI	ACCWGGT	1 cut(s)	1273
Csp6I	GTAC	2 cut(s)	741, 849
CviAII	CATG	9 cut(s)	1094, 1348, 1539, 1543, 1774, 1831, 1981, 2011, 2059
CviQI	GTAC	2 cut(s)	741, 849
DdeI	CTNAG	8 cut(s)	195, 273, 372, 651, 735, 1671, 1843, 1926
DpnI	GATC	3 cut(s)	1468, 1911, 1990
DpnII	GATC	3 cut(s)	1466, 1909, 1988
DraIII	CACNNNGTG	1 cut(s)	1552
DrdI	GACNNNNNNGTC	2 cut(s)	95, 1058
DseDI	GACNNNNNNGTC	2 cut(s)	95, 1058
EaeI	YGGCCR	2 cut(s)	944, 1598
Eam1104I	CTCTTC	2 cut(s)	210, 882
EarI	CTCTTC	2 cut(s)	210, 882
EciI	GGCGGA	1 cut(s)	392
Eco130I	CCWWGG	3 cut(s)	573, 1074, 1220
Eco31I	GGTCTC	2 cut(s)	1264, 1846
Eco57I	CTGAAG	6 cut(s)	246, 306, 354, 378, 420, 1344
Eco72I	CACGTG	1 cut(s)	998
Eco81I	CCTNAGG	3 cut(s)	273, 1671, 1926
EcoRI	GAATTC	3 cut(s)	394, 1128, 1914
EcoRII	CCWGG	5 cut(s)	48, 980, 1174, 1273, 1517
EcoT14I	CCWWGG	3 cut(s)	573, 1074, 1220
EcoT22I	ATGCAT	1 cut(s)	1544
ErhI	CCWWGG	3 cut(s)	573, 1074, 1220
Esp3I	CGTCTC	2 cut(s)	260, 1941
FaeI	CATG	9 cut(s)	1097, 1351, 1542, 1546, 1777, 1834, 1984, 2014, 2062
FaqI	GGGAC	1 cut(s)	867
FatI	CATG	9 cut(s)	1093, 1347, 1538, 1542, 1773, 1830, 1980, 2010, 2058
FauI	CCCGC	1 cut(s)	1214
FblI	GTMKAC	1 cut(s)	1848
Fnu4HI	GCNGC	6 cut(s)	192, 1210, 1515, 1800, 1803, 2066
FokI	GGATG	3 cut(s)	488, 791, 1029
Fsp4HI	GCNGC	6 cut(s)	192, 1210, 1515, 1800, 1803, 2066
GluI	GCNGC	6 cut(s)	192, 1210, 1515, 1800, 1803, 2066
GsaI	CCCAGC	2 cut(s)	795, 1378
GsuI	CTGGAG	3 cut(s)	578, 1839, 1994
HaeIII	GGCC	7 cut(s)	611, 796, 946, 1079, 1588, 1600, 2068
HapII	CCGG	3 cut(s)	147, 868, 1759
HgaI	GACGC	4 cut(s)	85, 173, 277, 939
Hin1I	GRCGYC	2 cut(s)	96, 269
Hin1II	CATG	9 cut(s)	1097, 1351, 1542, 1546, 1777, 1834, 1984, 2014, 2062
HincII	GTYRAC	1 cut(s)	699
HindII	GTYRAC	1 cut(s)	699
HindIII	AAGCTT	2 cut(s)	1030, 1241
HinfI	GANTC	8 cut(s)	230, 259, 368, 449, 713, 838, 1258, 1850
HpaII	CCGG	3 cut(s)	147, 868, 1759
HphI	GGTGA	6 cut(s)	161, 377, 440, 544, 1723, 1996
Hpy166II	GTNNAC	4 cut(s)	699, 995, 1198, 1849
Hpy188III	TCNNGA	8 cut(s)	263, 835, 884, 971, 1670, 1759, 1831, 1856
Hpy8I	GTNNAC	4 cut(s)	699, 995, 1198, 1849
HpyAV	CCTTC	7 cut(s)	651, 721, 914, 914, 1180, 1226, 1345
HpyCH4III	ACNGT	5 cut(s)	182, 485, 881, 1202, 1383
HpyCH4IV	ACGT	5 cut(s)	991, 997, 1496, 1573, 1705
HpyF10VI	GCNNNNNNNGC	4 cut(s)	862, 1038, 1142, 1552
HpyF3I	CTNAG	8 cut(s)	195, 273, 372, 651, 735, 1671, 1843, 1926
HpySE526I	ACGT	5 cut(s)	991, 997, 1496, 1573, 1705
Hsp92I	GRCGYC	2 cut(s)	96, 269
Hsp92II	CATG	9 cut(s)	1097, 1351, 1542, 1546, 1777, 1834, 1984, 2014, 2062
Kpn2I	TCCGGA	1 cut(s)	1758
Kzo9I	GATC	3 cut(s)	1466, 1909, 1988
LmnI	GCTCC	4 cut(s)	509, 898, 1252, 1672
Lsp1109I	GCAGC	4 cut(s)	178, 1196, 1501, 1786
LweI	GCATC	3 cut(s)	394, 1552, 1983
MabI	ACCWGGT	1 cut(s)	1273
MaeII	ACGT	5 cut(s)	991, 997, 1496, 1573, 1705
MaeIII	GTNAC	7 cut(s)	62, 113, 149, 365, 562, 761, 1711
MalI	GATC	3 cut(s)	1468, 1911, 1990
MboI	GATC	3 cut(s)	1466, 1909, 1988
MfeI	CAATTG	1 cut(s)	936
MhlI	GDGCHC	5 cut(s)	48, 867, 1157, 1207, 1698
MlsI	TGGCCA	2 cut(s)	946, 1600
MluNI	TGGCCA	2 cut(s)	946, 1600
MlyI	GAGTC	6 cut(s)	224, 253, 362, 722, 847, 1844
MmeI	TCCRAC	4 cut(s)	453, 994, 1590, 2058
Mox20I	TGGCCA	2 cut(s)	946, 1600
Mph1103I	ATGCAT	1 cut(s)	1544
MroI	TCCGGA	1 cut(s)	1758
MroXI	GAANNNNTTC	1 cut(s)	991
MscI	TGGCCA	2 cut(s)	946, 1600
MseI	TTAA	4 cut(s)	1634, 1743, 1965, 2104
MslI	CAYNNNNRTG	1 cut(s)	1835
Msp20I	TGGCCA	2 cut(s)	946, 1600
MspA1I	CMGCKG	2 cut(s)	1209, 1805
MspI	CCGG	3 cut(s)	147, 868, 1759
MspR9I	CCNGG	7 cut(s)	50, 147, 869, 982, 1176, 1275, 1519
MunI	CAATTG	1 cut(s)	936
MvaI	CCWGG	5 cut(s)	50, 982, 1176, 1275, 1519
MwoI	GCNNNNNNNGC	4 cut(s)	862, 1038, 1142, 1552
NciI	CCSGG	2 cut(s)	147, 869
NdeII	GATC	3 cut(s)	1466, 1909, 1988
NlaIII	CATG	9 cut(s)	1097, 1351, 1542, 1546, 1777, 1834, 1984, 2014, 2062
NlaIV	GGNNCC	4 cut(s)	894, 1080, 1218, 1933
NmuCI	GTSAC	5 cut(s)	62, 113, 149, 365, 1711
NsiI	ATGCAT	1 cut(s)	1544
NspI	RCATGY	2 cut(s)	1542, 1546
NspV	TTCGAA	2 cut(s)	844, 1445
PaeI	GCATGC	2 cut(s)	1542, 1546
PagI	TCATGA	1 cut(s)	1830
PaqCI	CACCTGC	1 cut(s)	908
PcsI	WCGNNNNNNNCGW	2 cut(s)	1918, 1947
PdmI	GAANNNNTTC	1 cut(s)	991
PfeI	GAWTC	2 cut(s)	449, 1258
PflFI	GACNNNGTC	1 cut(s)	1717
PkrI	GCNGC	6 cut(s)	193, 1211, 1516, 1801, 1804, 2067
PleI	GAGTC	6 cut(s)	224, 253, 362, 721, 846, 1844
PmaCI	CACGTG	1 cut(s)	998
PmlI	CACGTG	1 cut(s)	998
PpsI	GAGTC	6 cut(s)	224, 253, 362, 721, 846, 1844
Ppu21I	YACGTR	1 cut(s)	998
PshAI	GACNNNNGTC	1 cut(s)	1754
PshBI	ATTAAT	1 cut(s)	1965
Psp1406I	AACGTT	1 cut(s)	991
Psp6I	CCWGG	5 cut(s)	48, 980, 1174, 1273, 1517
PspCI	CACGTG	1 cut(s)	998
PspFI	CCCAGC	2 cut(s)	791, 1374
PspGI	CCWGG	5 cut(s)	48, 980, 1174, 1273, 1517
PspN4I	GGNNCC	4 cut(s)	894, 1080, 1218, 1933
PspPI	GGNCC	3 cut(s)	794, 1078, 2067
PsrI	GAACNNNNNNTAC	2 cut(s)	12, 44
PstI	CTGCAG	2 cut(s)	1214, 1687
PstNI	CAGNNNCTG	1 cut(s)	1318
PsyI	GACNNNGTC	1 cut(s)	1717
RsaI	GTAC	2 cut(s)	742, 850
RsaNI	GTAC	2 cut(s)	741, 849
RseI	CAYNNNNRTG	1 cut(s)	1835
SaqAI	TTAA	4 cut(s)	1634, 1743, 1965, 2104
SatI	GCNGC	6 cut(s)	192, 1210, 1515, 1800, 1803, 2066
Sau3AI	GATC	3 cut(s)	1466, 1909, 1988
Sau96I	GGNCC	3 cut(s)	794, 1078, 2067
SchI	GAGTC	6 cut(s)	224, 253, 362, 722, 847, 1844
ScrFI	CCNGG	7 cut(s)	50, 147, 869, 982, 1176, 1275, 1519
SduI	GDGCHC	5 cut(s)	48, 867, 1157, 1207, 1698
SexAI	ACCWGGT	1 cut(s)	1273
SfaNI	GCATC	3 cut(s)	394, 1552, 1983
SfcI	CTRYAG	4 cut(s)	18, 1210, 1557, 1683
SfuI	TTCGAA	2 cut(s)	844, 1445
SmiMI	CAYNNNNRTG	1 cut(s)	1835
SmlI	CTYRAG	3 cut(s)	261, 1101, 2087
SmoI	CTYRAG	3 cut(s)	261, 1101, 2087
SphI	GCATGC	2 cut(s)	1542, 1546
SsiI	CCGC	6 cut(s)	239, 377, 1207, 1803, 1901, 2065
StyD4I	CCNGG	7 cut(s)	48, 145, 867, 980, 1174, 1273, 1517
StyI	CCWWGG	3 cut(s)	573, 1074, 1220
TaaI	ACNGT	5 cut(s)	182, 485, 881, 1202, 1383
TaiI	ACGT	5 cut(s)	994, 1000, 1499, 1576, 1708
TaqI	TCGA	6 cut(s)	844, 1445, 1604, 1912, 1921, 1991
TaqII	GACCGA	1 cut(s)	323
TauI	GCSGC	2 cut(s)	1805, 2068
TfiI	GAWTC	2 cut(s)	449, 1258
Tru1I	TTAA	4 cut(s)	1634, 1743, 1965, 2104
Tru9I	TTAA	4 cut(s)	1634, 1743, 1965, 2104
TscAI	CASTG	9 cut(s)	187, 460, 490, 793, 884, 1205, 1687, 1703, 2003
TseFI	GTSAC	5 cut(s)	62, 113, 149, 365, 1711
TseI	GCWGC	4 cut(s)	191, 1209, 1514, 1799
Tsp45I	GTSAC	5 cut(s)	62, 113, 149, 365, 1711
TspDTI	ATGAA	4 cut(s)	793, 1110, 1364, 1847
TspRI	CASTG	9 cut(s)	187, 460, 490, 793, 884, 1205, 1687, 1703, 2003
Tth111I	GACNNNGTC	1 cut(s)	1717
VspI	ATTAAT	1 cut(s)	1965
XapI	RAATTY	5 cut(s)	394, 1128, 1636, 1821, 1914
XceI	RCATGY	2 cut(s)	1542, 1546
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1515
XmiI	GTMKAC	1 cut(s)	1848
XmnI	GAANNNNTTC	1 cut(s)	991
Zsp2I	ATGCAT	1 cut(s)	1544

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.