Rh2BG302900

Methyltransferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
35068874 .. 35074519
5646 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG302900.1

Sequence Viewer

Length: 1809 bp
ATGGCGTTAGGGAAGTATAGTAGAGTTGATAATAGGAGGTCGGCGTCGAGTTACTGCTCGACGGTGACAATTGTGGTGTTTGTGGCATTGTGCTTGGTGGGGGTTTGGATGATGACGTCATCGTCGGTGGTGCCGGTTCAGAATGTAGATGTAGGTCAGGAGAACAAGAGTGAGGTGAAGGAGCAAGTGATTGAGACCAATGAGGGGAATAACAACAGGCAGTTTGAAGATAACCCCGGTGATTTACCGGAGGATGCGACGAAAGGAGATACCAATGAGGGTGCTGCTCAGGTGGAAGAGAAGCCTGAGGTGAAAACTGAAGAGAAGGTTGAGGAGAAAACTGAAGAGAAGGTTGAGGAGAAAACAGAAGATGGGTCGAAAACTGAAACGGAAGATGGAGGAAGTAAGACAGAGGAGGGAGAGTCTAAGGTGGAAAATGATGAATCGAATTCGGAAGATGGAGAGAAGAAAAGTGATGGTGACGATGAGAAAAAGAATGATTCGGGCGAGGGTGACAATGAAAAGAAATCGGATGATGACAATGAGAAGAAAACGGAGAATTCTGATGAAACAAAGGATGCTGAGAAGGACAATATTCAGATTGACGAGAAAGTGGAAAAAACTGATAAGGAGCAAGATAGTGAGAAATCGGATAATGGGCAGACTGTAAACCAGACTTCAAATGAGGTATTTCCTTCTGTTGCTCAGTCAGAGCTTTTGAATGAGACTGCAACCCAAAATGGGTCATGGTCAACTCAGTCTACAGAGTCAAAGAATGAGAAGGAGGCTCAACGTTCTTCTGACCAGCAAATTGATTACAATTGGAAACTTTGTAATTCAACTGCTGGGCCTGATTTCATCCCATGCCTTGACAATTTGCAAGCCATTAGGAGTCTTCACAGTACCAAGCATTATGAACATCGGGAGAGGCACTGTCCGGAGGAGCCTCCCACCTGCCTCCTTCCTCTTCCAGAAGGATATAAACGCCCAATTGAGTGGCCAATGAGCAGGGAAAAGATATGGTACTATAATGTCCCCCATACCAAACTTGCTCAAGTTAAGGGGCACCAGAACTGGGTCAAAGTCACTGGCGAATACCTTACTTTCCCTGGTGGTGGAACACAATTCAAGCATGGTGCTCTTCATTATATAGATTGGCTACAAGAGTCTGTTTCTGATATTGCCTGGGGAAAACGATCTCGTGTCATATTAGATGTTGGATGTGGGGTTGCAAGCTTTGGAGGATATCAATTTGACAGAGATGTCCTAACAATGTCCTTTGCCCCAAAAGATGAGCATGAAGCTCAAGTGCAGTTTGCACTTGAAAGAGGAATTCCTGCTATATCTGCTGTGATGGGCACACAGAGACTTCCCTATCCTAGCAAAGTTTTTGATGTTGTCCACTGTGCCCGCTGCAGGGTTCCCTGGCATATAGAAGGTGGTAAGCTTCTATTAGAGCTGAATCGTGTGTTGAGACCTGGTGGTTTCTTTGTGTGGTCTGCTACCCCAGTATATCAGAAGAAACGTGAAGACGTTGAAATATGGGCAGCCATGAAGGAACTAACAGAGAAGATATGTTGGGAACTTGTCTCAATTAATAAGGATACAATAAATGCAGTTGGTGCAGCTATATACAGAAAACCTACCACCAATGAATGTTACGAGAAAAGATCACAAAATGAGCCTCCTATCTGTGACAAGTCTGATGATCCGAATGCAGCATGGTATTCATTATATTTCTGTTACTTCATTTTATTCCTACCAACTAAAGAAATCGGAAAAAAGTCTCCCACTTATTTGATGTTGTAG

Protein Analysis

602

Amino Acids

68.02

Weight (kDa)

4.84

Isoelectric Point (pI)

46.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_29 PF03141 285 - 577 4.1e-138 Putative S-adenosyl-L-methionine-dependent methyltransferase
Methyltransf_11 PF08241 404 - 498 4.8e-06 Methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 962
AasI GACNNNNNNGTC 2 cut(s) 121, 1262
AatII GACGTC 1 cut(s) 119
Acc36I ACCTGC 1 cut(s) 962
AccB1I GGYRCC 2 cut(s) 130, 1065
AccI GTMKAC 1 cut(s) 761
AccIII TCCGGA 1 cut(s) 937
AciI CCGC 1 cut(s) 1411
AclI AACGTT 1 cut(s) 793
AclWI GGATC 1 cut(s) 1703
AcoI YGGCCR 1 cut(s) 998
AcsI RAATTY 3 cut(s) 448, 559, 1332
AcuI CTGAAG 2 cut(s) 339, 363
AcyI GRCGYC 2 cut(s) 44, 116
AfaI GTAC 2 cut(s) 904, 1025
AfiI CCNNNNNNNGG 6 cut(s) 204, 741, 1075, 1115, 1416, 1417
AgsI TTSAA 7 cut(s) 227, 681, 721, 840, 1129, 1325, 1538
AjnI CCWGG 4 cut(s) 1108, 1184, 1424, 1477
AluBI AGCT 6 cut(s) 715, 1236, 1304, 1447, 1459, 1628
AluI AGCT 6 cut(s) 715, 1236, 1304, 1447, 1459, 1628
Alw21I GWGCWC 1 cut(s) 1141
Alw26I GTCTC 6 cut(s) 188, 719, 1360, 1468, 1594, 1791
AlwI GGATC 1 cut(s) 1703
Aor13HI TCCGGA 1 cut(s) 937
AoxI GGCC 2 cut(s) 848, 998
ApeKI GCWGC 5 cut(s) 284, 1413, 1547, 1625, 1718
ApoI RAATTY 3 cut(s) 448, 559, 1332
AseI ATTAAT 1 cut(s) 1596
AspS9I GGNCC 1 cut(s) 848
AsuC2I CCSGG 1 cut(s) 237
AsuHPI GGTGA 6 cut(s) 76, 187, 251, 322, 491, 524
AxyI CCTNAGG 1 cut(s) 306
BaeGI GKGCMC 3 cut(s) 1068, 1361, 1411
BalI TGGCCA 1 cut(s) 1000
BanI GGYRCC 2 cut(s) 130, 1065
BauI CACGAG 1 cut(s) 1200
BbsI GAAGAC 2 cut(s) 887, 1536
Bbv12I GWGCWC 1 cut(s) 1141
BbvI GCAGC 5 cut(s) 271, 1400, 1559, 1637, 1730
BccI CCATC 5 cut(s) 365, 389, 452, 470, 1348
BciT130I CCWGG 4 cut(s) 1110, 1186, 1426, 1479
BciVI GTATCC 1 cut(s) 1597
BcnI CCSGG 1 cut(s) 237
BcoDI GTCTC 6 cut(s) 188, 719, 1360, 1468, 1594, 1791
BfaI CTAG 1 cut(s) 1380
BfmI CTRYAG 2 cut(s) 762, 1414
BfuAI ACCTGC 1 cut(s) 962
BfuI GTATCC 1 cut(s) 1597
BisI GCNGC 5 cut(s) 285, 1414, 1548, 1626, 1719
BlsI GCNGC 5 cut(s) 286, 1415, 1549, 1627, 1720
Bme1390I CCNGG 5 cut(s) 237, 1110, 1186, 1426, 1479
BmgT120I GGNCC 1 cut(s) 848
BmiI GGNNCC 4 cut(s) 132, 945, 1067, 1422
BmrFI CCNGG 5 cut(s) 237, 1110, 1186, 1426, 1479
BmrI ACTGGG 2 cut(s) 1084, 1502
BmsI GCATC 2 cut(s) 244, 568
BmuI ACTGGG 2 cut(s) 1084, 1502
BpiI GAAGAC 2 cut(s) 887, 1536
Bpu10I CCTNAGC 1 cut(s) 288
BpuEI CTTGAG 2 cut(s) 1038, 1290
BpuMI CCSGG 1 cut(s) 237
BsaHI GRCGYC 2 cut(s) 44, 116
BsaI GGTCTC 2 cut(s) 188, 1468
BsaJI CCNNGG 4 cut(s) 235, 1108, 1185, 1424
BsaWI WCCGGW 2 cut(s) 247, 937
BsaXI ACNNNNNCTCC 2 cut(s) 407, 437
Bsc4I CCNNNNNNNGG 6 cut(s) 204, 741, 1075, 1115, 1416, 1417
Bse118I RCCGGY 1 cut(s) 133
Bse1I ACTGG 3 cut(s) 1079, 1093, 1508
Bse21I CCTNAGG 1 cut(s) 306
BseAI TCCGGA 1 cut(s) 937
BseBI CCWGG 4 cut(s) 1110, 1186, 1426, 1479
BseDI CCNNGG 4 cut(s) 235, 1108, 1185, 1424
BseGI GGATG 6 cut(s) 114, 259, 538, 583, 858, 1226
BseLI CCNNNNNNNGG 6 cut(s) 204, 741, 1075, 1115, 1416, 1417
BseMII CTCAG 5 cut(s) 297, 302, 573, 719, 770
BseNI ACTGG 3 cut(s) 1079, 1093, 1508
BseRI GAGGAG 4 cut(s) 347, 371, 428, 956
BseSI GKGCMC 3 cut(s) 1068, 1361, 1411
BseXI GCAGC 5 cut(s) 271, 1400, 1559, 1637, 1730
BseYI CCCAGC 1 cut(s) 845
BsgI GTGCAG 2 cut(s) 1331, 1644
BshFI GGCC 2 cut(s) 850, 1000
BshNI GGYRCC 2 cut(s) 130, 1065
BsiHKAI GWGCWC 1 cut(s) 1141
BsiSI CCGG 4 cut(s) 134, 237, 248, 938
BslFI GGGAC 1 cut(s) 1019
BslI CCNNNNNNNGG 6 cut(s) 204, 741, 1075, 1115, 1416, 1417
BsmAI GTCTC 6 cut(s) 188, 719, 1360, 1468, 1594, 1791
BsmFI GGGAC 1 cut(s) 1019
BsmI GAATGC 1 cut(s) 1720
BsnI GGCC 2 cut(s) 850, 1000
Bso31I GGTCTC 2 cut(s) 188, 1468
Bsp1286I GDGCHC 4 cut(s) 1068, 1141, 1361, 1411
Bsp13I TCCGGA 1 cut(s) 937
Bsp143I GATC 3 cut(s) 1196, 1670, 1708
BspACI CCGC 1 cut(s) 1411
BspANI GGCC 2 cut(s) 850, 1000
BspCNI CTCAG 5 cut(s) 298, 301, 574, 718, 769
BspEI TCCGGA 1 cut(s) 937
BspLI GGNNCC 4 cut(s) 132, 945, 1067, 1422
BspMAI CTGCAG 1 cut(s) 1418
BspMI ACCTGC 1 cut(s) 962
BspPI GGATC 1 cut(s) 1703
BspQI GCTCTTC 1 cut(s) 1146
BspT107I GGYRCC 2 cut(s) 130, 1065
BspTNI GGTCTC 2 cut(s) 188, 1468
BsrFI RCCGGY 1 cut(s) 133
BsrI ACTGG 3 cut(s) 1079, 1093, 1508
BssAI RCCGGY 1 cut(s) 133
BssECI CCNNGG 4 cut(s) 235, 1108, 1185, 1424
BssMI GATC 3 cut(s) 1196, 1670, 1708
BssNI GRCGYC 2 cut(s) 44, 116
BssSI CACGAG 1 cut(s) 1200
Bst2BI CACGAG 1 cut(s) 1200
Bst2UI CCWGG 4 cut(s) 1110, 1186, 1426, 1479
Bst4CI ACNGT 5 cut(s) 64, 667, 902, 935, 1406
Bst6I CTCTTC 5 cut(s) 291, 315, 339, 972, 1146
BstACI GRCGYC 2 cut(s) 44, 116
BstAPI GCANNNNNTGC 1 cut(s) 1622
BstC8I GCNNGC 3 cut(s) 882, 1234, 1411
BstDEI CTNAG 6 cut(s) 288, 306, 426, 582, 705, 756
BstF5I GGATG 6 cut(s) 114, 259, 538, 583, 858, 1226
BstKTI GATC 3 cut(s) 1199, 1673, 1711
BstMAI GTCTC 6 cut(s) 188, 719, 1360, 1468, 1594, 1791
BstMBI GATC 3 cut(s) 1196, 1670, 1708
BstMWI GCNNNNNNNGC 2 cut(s) 1346, 1622
BstNI CCWGG 4 cut(s) 1110, 1186, 1426, 1479
BstSCI CCNGG 5 cut(s) 235, 1108, 1184, 1424, 1477
BstSFI CTRYAG 2 cut(s) 762, 1414
BstSLI GKGCMC 3 cut(s) 1068, 1361, 1411
BstV1I GCAGC 5 cut(s) 271, 1400, 1559, 1637, 1730
BstV2I GAAGAC 2 cut(s) 887, 1536
BstXI CCANNNNNNTGG 1 cut(s) 996
Bsu36I CCTNAGG 1 cut(s) 306
BsuI GTATCC 1 cut(s) 1597
BsuRI GGCC 2 cut(s) 850, 1000
BtsCI GGATG 6 cut(s) 114, 259, 538, 583, 858, 1226
BtsIMutI CAGTG 3 cut(s) 931, 1086, 1402
BveI ACCTGC 1 cut(s) 962
Cac8I GCNNGC 3 cut(s) 882, 1234, 1411
Cfr10I RCCGGY 1 cut(s) 133
Cfr13I GGNCC 1 cut(s) 848
CseI GACGC 1 cut(s) 33
CsiI ACCWGGT 1 cut(s) 1477
Csp6I GTAC 2 cut(s) 903, 1024
CviAII CATG 6 cut(s) 747, 864, 1133, 1298, 1552, 1722
CviQI GTAC 2 cut(s) 903, 1024
DdeI CTNAG 6 cut(s) 288, 306, 426, 582, 705, 756
DpnI GATC 3 cut(s) 1198, 1672, 1710
DpnII GATC 3 cut(s) 1196, 1670, 1708
DrdI GACNNNNNNGTC 2 cut(s) 121, 1262
DseDI GACNNNNNNGTC 2 cut(s) 121, 1262
EaeI YGGCCR 1 cut(s) 998
Eam1104I CTCTTC 5 cut(s) 291, 315, 339, 972, 1146
EarI CTCTTC 5 cut(s) 291, 315, 339, 972, 1146
Eco31I GGTCTC 2 cut(s) 188, 1468
Eco32I GATATC 1 cut(s) 1247
Eco57I CTGAAG 2 cut(s) 339, 363
Eco81I CCTNAGG 1 cut(s) 306
EcoRI GAATTC 3 cut(s) 448, 559, 1332
EcoRII CCWGG 4 cut(s) 1108, 1184, 1424, 1477
EcoRV GATATC 1 cut(s) 1247
FaeI CATG 6 cut(s) 750, 867, 1136, 1301, 1555, 1725
FaqI GGGAC 1 cut(s) 1019
FatI CATG 6 cut(s) 746, 863, 1132, 1297, 1551, 1721
FauI CCCGC 1 cut(s) 1418
FblI GTMKAC 1 cut(s) 761
Fnu4HI GCNGC 5 cut(s) 285, 1414, 1548, 1626, 1719
FokI GGATG 6 cut(s) 121, 266, 545, 590, 845, 1233
Fsp4HI GCNGC 5 cut(s) 285, 1414, 1548, 1626, 1719
FspBI CTAG 1 cut(s) 1380
GluI GCNGC 5 cut(s) 285, 1414, 1548, 1626, 1719
GsaI CCCAGC 1 cut(s) 849
HaeIII GGCC 2 cut(s) 850, 1000
HapII CCGG 4 cut(s) 134, 237, 248, 938
HgaI GACGC 1 cut(s) 33
Hin1I GRCGYC 2 cut(s) 44, 116
Hin1II CATG 6 cut(s) 750, 867, 1136, 1301, 1555, 1725
HincII GTYRAC 1 cut(s) 753
HindII GTYRAC 1 cut(s) 753
HindIII AAGCTT 2 cut(s) 1234, 1445
HinfI GANTC 7 cut(s) 422, 443, 500, 767, 892, 1166, 1462
HpaII CCGG 4 cut(s) 134, 237, 248, 938
HphI GGTGA 6 cut(s) 76, 187, 251, 322, 491, 524
Hpy166II GTNNAC 4 cut(s) 670, 753, 762, 1402
Hpy188III TCNNGA 4 cut(s) 158, 923, 938, 971
Hpy8I GTNNAC 4 cut(s) 670, 753, 762, 1402
Hpy99I CGWCG 4 cut(s) 49, 64, 127, 262
HpyCH4III ACNGT 5 cut(s) 64, 667, 902, 935, 1406
HpyCH4IV ACGT 4 cut(s) 116, 793, 1525, 1533
HpyCH4V TGCA 9 cut(s) 731, 880, 1232, 1312, 1319, 1416, 1616, 1625, 1718
HpyF10VI GCNNNNNNNGC 2 cut(s) 1346, 1622
HpyF3I CTNAG 6 cut(s) 288, 306, 426, 582, 705, 756
HpySE526I ACGT 4 cut(s) 116, 793, 1525, 1533
Hsp92I GRCGYC 2 cut(s) 44, 116
Hsp92II CATG 6 cut(s) 750, 867, 1136, 1301, 1555, 1725
Kpn2I TCCGGA 1 cut(s) 937
Kzo9I GATC 3 cut(s) 1196, 1670, 1708
LguI GCTCTTC 1 cut(s) 1146
LmnI GCTCC 3 cut(s) 181, 631, 943
Lsp1109I GCAGC 5 cut(s) 271, 1400, 1559, 1637, 1730
LweI GCATC 2 cut(s) 244, 568
MabI ACCWGGT 1 cut(s) 1477
MaeI CTAG 1 cut(s) 1380
MaeII ACGT 4 cut(s) 116, 793, 1525, 1533
MaeIII GTNAC 8 cut(s) 50, 64, 479, 512, 1084, 1658, 1694, 1742
MalI GATC 3 cut(s) 1198, 1672, 1710
MboI GATC 3 cut(s) 1196, 1670, 1708
MfeI CAATTG 3 cut(s) 69, 820, 990
MhlI GDGCHC 4 cut(s) 1068, 1141, 1361, 1411
MlsI TGGCCA 1 cut(s) 1000
MluNI TGGCCA 1 cut(s) 1000
MlyI GAGTC 4 cut(s) 431, 776, 901, 1175
MmeI TCCRAC 1 cut(s) 1198
Mox20I TGGCCA 1 cut(s) 1000
MroI TCCGGA 1 cut(s) 937
MscI TGGCCA 1 cut(s) 1000
MseI TTAA 2 cut(s) 1059, 1596
Msp20I TGGCCA 1 cut(s) 1000
MspA1I CMGCKG 1 cut(s) 1413
MspI CCGG 4 cut(s) 134, 237, 248, 938
MspR9I CCNGG 5 cut(s) 237, 1110, 1186, 1426, 1479
MunI CAATTG 3 cut(s) 69, 820, 990
Mva1269I GAATGC 1 cut(s) 1720
MvaI CCWGG 4 cut(s) 1110, 1186, 1426, 1479
MwoI GCNNNNNNNGC 2 cut(s) 1346, 1622
NciI CCSGG 1 cut(s) 237
NdeII GATC 3 cut(s) 1196, 1670, 1708
NlaIII CATG 6 cut(s) 750, 867, 1136, 1301, 1555, 1725
NlaIV GGNNCC 4 cut(s) 132, 945, 1067, 1422
NmuCI GTSAC 5 cut(s) 64, 479, 512, 1084, 1694
PaqCI CACCTGC 1 cut(s) 962
PciSI GCTCTTC 1 cut(s) 1146
PctI GAATGC 1 cut(s) 1720
PfeI GAWTC 3 cut(s) 443, 500, 1462
PkrI GCNGC 5 cut(s) 286, 1415, 1549, 1627, 1720
PleI GAGTC 4 cut(s) 430, 775, 900, 1174
PpsI GAGTC 4 cut(s) 430, 775, 900, 1174
PshBI ATTAAT 1 cut(s) 1596
Psp1406I AACGTT 1 cut(s) 793
Psp6I CCWGG 4 cut(s) 1108, 1184, 1424, 1477
PspFI CCCAGC 1 cut(s) 845
PspGI CCWGG 4 cut(s) 1108, 1184, 1424, 1477
PspN4I GGNNCC 4 cut(s) 132, 945, 1067, 1422
PspPI GGNCC 1 cut(s) 848
PstI CTGCAG 1 cut(s) 1418
RsaI GTAC 2 cut(s) 904, 1025
RsaNI GTAC 2 cut(s) 903, 1024
SapI GCTCTTC 1 cut(s) 1146
SaqAI TTAA 2 cut(s) 1059, 1596
SatI GCNGC 5 cut(s) 285, 1414, 1548, 1626, 1719
Sau3AI GATC 3 cut(s) 1196, 1670, 1708
Sau96I GGNCC 1 cut(s) 848
SchI GAGTC 4 cut(s) 431, 776, 901, 1175
ScrFI CCNGG 5 cut(s) 237, 1110, 1186, 1426, 1479
SduI GDGCHC 4 cut(s) 1068, 1141, 1361, 1411
SexAI ACCWGGT 1 cut(s) 1477
SfaNI GCATC 2 cut(s) 244, 568
SfcI CTRYAG 2 cut(s) 762, 1414
SmlI CTYRAG 2 cut(s) 1053, 1305
SmoI CTYRAG 2 cut(s) 1053, 1305
SsiI CCGC 1 cut(s) 1411
SspI AATATT 1 cut(s) 595
SspMI CTAG 1 cut(s) 1380
StyD4I CCNGG 5 cut(s) 235, 1108, 1184, 1424, 1477
TaaI ACNGT 5 cut(s) 64, 667, 902, 935, 1406
TaiI ACGT 4 cut(s) 119, 796, 1528, 1536
TaqI TCGA 4 cut(s) 47, 59, 377, 446
TfiI GAWTC 3 cut(s) 443, 500, 1462
Tru1I TTAA 2 cut(s) 1059, 1596
Tru9I TTAA 2 cut(s) 1059, 1596
TscAI CASTG 3 cut(s) 938, 1093, 1409
TseFI GTSAC 5 cut(s) 64, 479, 512, 1084, 1694
TseI GCWGC 5 cut(s) 284, 1413, 1547, 1625, 1718
Tsp45I GTSAC 5 cut(s) 64, 479, 512, 1084, 1694
TspGWI ACGGA 2 cut(s) 404, 569
TspRI CASTG 3 cut(s) 938, 1093, 1409
VspI ATTAAT 1 cut(s) 1596
XapI RAATTY 3 cut(s) 448, 559, 1332
XmiI GTMKAC 1 cut(s) 761
XspI CTAG 1 cut(s) 1380
ZraI GACGTC 1 cut(s) 117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.