Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0003400

Physical Location & Seq

Genomic Coordinates Forward (+)

8702160 .. 8705639

Gene Structure 3480 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g12700.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2238 bp

ATGGATGAAATCGGTGTCCATAACCCCCTTCTTCTTCCAAGCCAACCTTCTCGACGTGCCTTCGTCCGGAAGATACCTCTTTTCGTAACCTTGGCGAAATGGACTCTCAAGATCACAATGTGGGTGCTTTTCATTTCATGGGTGGTTTTCATTTTTCTGTTCCCTCTAGGCTCTGTGCAGACATTATTTGGTGACTGGATTGTAGCCACCGATGGAACTCTTTACGGGACTACAGGAACCCTGCTCCTTCTGTTCAACGGTCCTCTTCTCGTTATTGCCTTGCTTTCGATAGCATTTCTTGCTATCTCCGGAGAAGAAGAGCTCCCCCACAAGAAGAAGAAGACTTCAGAAAACCCGAGTTTCCGCCTGTGGACATTCCCAGTTCTTGTGGATGGACTATTTGGGGTTGTTTCTGCTGCTGAGTTGATTGGGATATTACTCTTTGTTGTGTATACTATGTGGTCTGTGTCCTATTATGCCGTGAGCATTCTCGACAAGATCCCTGGTGCGTTAAGTCTTAAAGCACAAAGTTGTTTGTTCCTGGCAGTTTTCGGGGCATACTTAGCCTCGAGTGGGATGTTTTGCTTGGCATTTTTGTTCCTTCCTATTGCAAGGGGATCAGTTCTTCTTCGCCTTATAGATATCCCTTTCGAGCATGCTACAAGATATCATGTATGGCTGGGACATCTCACGATGTCGCTCTTTACTCTCCATGGACTATGTTACATAGCGGCATGGGCAATGGAGGGCGATCTCCTTGCTAAAATATTGGAGTGGAGGGAGATTGGTGTTGCAAATCTTGCAGGAGTAATCAGCCTTGCTGCTGGTCTGTTGATGTGGGTCACATCGCTCCCTCCAGTTAGAAAGCTGAATTTTGAGTTGTTCTTCTACACTCATCAACTATATGTCATCTTCATTGCCTTCTTGGCTATGCATGTTGGTGATTTCCTTTTCGCCTGTGCTGCCGGAGGCATATTTATTTATATCCTTGATCGTTTTCTGAGATTCTGCCAATCGCGAAGGACTGTTGGTGTAATCTCGGCCAAGTGCCTTCCATGCGGAACTGTAGAATTAGTCCTCGCAAAACCTGAAAATCTGCAGTACAACGCGCTCAGTTTTATTTTTCTTCAAGTCCGGGAACTGTCATGGCTTCAATGGCATCCTTTTAGCGTTTCATCCAGTCCTCTGGACGGTAAGTATCACATTTCCGTCCTCATCAAGGTTCTTGGGAAATGGACAGAAAATCTTCGAGGAAAGATCTTGAAAAATTCAGAGGCTGAACAACAACAAAGCGCGCTCTCTTGCACGCCTCCTACAACACTAACAGTGTCTGTTGAGGGGCCTTATGGGCATGAGATACCATACCACTTGGTGTATGAACATCTGGTCTTAGTAGCGGGCGGCATTGGGATTTCGCCTTTCCTGGCTGTCCTGAGTGACATTGTCCACTGTGTTAAGGAAGGGAGATTGTGTCAAGTACGAAATATTTTGATTGTCTGGGCTGTCAAAACATCAAACGAGCTTCCTCTTCTTTCAACCATTGACATGGACACAGTTTCCAGTAAACTAAATATTCAGACTCTAATTTACGTCACTCGGGAATCTGGTCCTCCGTTGGAAGAGGGTCAAGTTCCGAACAGCGAGCTGGAGTTTCCTCCTCGTTGTCCTCCTAGGCTGAAAAGGTGTAGCATGTCTGTTTTGGTTGGTACCGGACATAATCTATGGTCCGGACTATATCTCATCTCATCGACGGCAGGCTTAGTTATCATATTGGGTTTGTTGGATGTCTTGTACATAAACCCGTACCGTATATCTGCATGGTGGTACAAAGGGCTTCTGTTGCTGCTCTGTATGATTGCAAGCGTGGTCGTCTTTGGGGGTCTTGTGGTTGGTTTATGGCATCTTTGGGAGCGAAAAATTTCGGTACAGGATCAATGCGAAGATGATGCTTCAGATGTATATAAGGCGGAGCATGAAGAAACTGTAGGTCGCAGTGATTCAAATGAGCACCGAGAAAATCTTTCAAAGTTAACCGGCATTCGTTATGGTGCAAGGCCGAACTTCAAAGAAATTTTTGGAACCATATCCAAGGATTGGGGTAGCGTCGATGTGGGCGTCATTGTCTGTGGTCCTCCAAGTTTTGAATCAAGTGTTGCCAAAGAGATCAGGTCACACAATTTGAGGAGACAACGCGACGATCCTATCTTCCATTTCAACAGTCACAGTTTCGATCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000293 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006091 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009767 GO:0009987 GO:0015979 GO:0016020 GO:0016491 GO:0016722 GO:0016723 GO:0019684 GO:0022900 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0055114 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

746

Amino Acids

83.18

Weight (kDa)

7.05

Isoelectric Point (pI)

36.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003400)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49730 AT5G49730 AT5G49740 AT5G49740 AT5G49740
fragaria_vesca	FvH4_5g27150 FvH4_5g27150 FvH4_5g27150 FvH4_5g27150 FvH4_5g27150
malus_domestica	MD08G1250800.v1.1 MD15G1140500.v1.1
prunus_persica	Prupe.1G587800_v2.0.a1 Prupe.1G587800_v2.0.a1
pyrus_communis	pycom08g21770 pycom15g12700
rosa_chinensis	RchiOBHm_Chr7g0218161 RchiOBHm_Chr7g0218171
rosa_laevigata	RLG00000002392
rosa_multiflora	Rmu_sc0003627.1_g000006 Rmu_sc0003627.1_g000007
rosa_roxburghii	Rroxscaffold_3G00241250 Rroxscaffold_3G00241260
rosa_rugosa	Rorug07G0174700 Rorug07G0174700 Rorug07G0174800
rosa_samantha	Rh7AG317100 Rh7AG317200 Rh7BG308300 Rh7BG315800 Rh7CG333900 Rh7CG334000 Rh7DG316000 Rh7DG316200
rosa_wichuraiana	Rw7G026830 Rw7G026840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1706
AccB1I	GGYRCC	1 cut(s)	1706
AccB7I	CCANNNNNTGG	1 cut(s)	2094
AccI	GTMKAC	1 cut(s)	452
AccII	CGCG	4 cut(s)	1018, 1109, 1295, 2193
AccIII	TCCGGA	3 cut(s)	66, 308, 1727
AciI	CCGC	6 cut(s)	364, 731, 1059, 1397, 1401, 1967
AclWI	GGATC	4 cut(s)	493, 625, 1938, 2192
AcoI	YGGCCR	1 cut(s)	1041
AcsI	RAATTY	4 cut(s)	871, 1267, 1917, 2070
AcuI	CTGAAG	2 cut(s)	330, 1935
AcyI	GRCGYC	1 cut(s)	2115
AdeI	CACNNNGTG	2 cut(s)	120, 1372
AfaI	GTAC	7 cut(s)	1103, 1479, 1708, 1793, 1805, 1826, 1926
AfiI	CCNNNNNNNGG	5 cut(s)	66, 573, 1190, 1219, 2094
AjiI	CACGTC	1 cut(s)	56
AjnI	CCWGG	3 cut(s)	502, 540, 1422
AjuI	GAANNNNNNNTTGG	2 cut(s)	31, 63
AluBI	AGCT	4 cut(s)	322, 868, 1522, 1645
AluI	AGCT	4 cut(s)	322, 868, 1522, 1645
Alw21I	GWGCWC	2 cut(s)	324, 2010
Alw26I	GTCTC	1 cut(s)	2179
AlwI	GGATC	4 cut(s)	493, 625, 1938, 2192
AlwNI	CAGNNNCTG	2 cut(s)	1277, 1331
Ama87I	CYCGRG	3 cut(s)	355, 568, 1596
Aor13HI	TCCGGA	3 cut(s)	66, 308, 1727
AoxI	GGCC	3 cut(s)	1041, 1340, 2054
ApeKI	GCWGC	4 cut(s)	416, 821, 962, 1843
ApoI	RAATTY	4 cut(s)	871, 1267, 1917, 2070
Asp700I	GAANNNNTTC	2 cut(s)	1245, 1918
Asp718I	GGTACC	1 cut(s)	1706
AspA2I	CCTAGG	1 cut(s)	1670
AspLEI	GCGC	3 cut(s)	1111, 1295, 1297
AspS9I	GGNCC	5 cut(s)	260, 1340, 1607, 1725, 2129
AsuC2I	CCSGG	1 cut(s)	1136
AsuHPI	GGTGA	2 cut(s)	203, 953
AvaI	CYCGRG	3 cut(s)	355, 568, 1596
AvaII	GGWCC	4 cut(s)	260, 1607, 1725, 2129
AvrII	CCTAGG	1 cut(s)	1670
BanI	GGYRCC	1 cut(s)	1706
BanII	GRGCYC	1 cut(s)	324
BbsI	GAAGAC	1 cut(s)	347
Bbv12I	GWGCWC	2 cut(s)	324, 2010
BbvI	GCAGC	4 cut(s)	403, 808, 949, 1830
BccI	CCATC	2 cut(s)	206, 386
BceAI	ACGGC	2 cut(s)	464, 1767
BcgI	CGANNNNNNTGC	4 cut(s)	740, 774, 1928, 1962
BciT130I	CCWGG	3 cut(s)	504, 542, 1424
BcnI	CCSGG	1 cut(s)	1136
BcoDI	GTCTC	1 cut(s)	2179
BfaI	CTAG	2 cut(s)	167, 1671
BfmI	CTRYAG	5 cut(s)	231, 1065, 1097, 1983, 2234
BglI	GCCNNNNNGGC	2 cut(s)	926, 1348
BglII	AGATCT	1 cut(s)	1257
BisI	GCNGC	6 cut(s)	417, 732, 822, 963, 1402, 1844
BlnI	CCTAGG	1 cut(s)	1670
BlsI	GCNGC	6 cut(s)	418, 733, 823, 964, 1403, 1845
Bme1390I	CCNGG	4 cut(s)	504, 542, 1136, 1424
Bme18I	GGWCC	4 cut(s)	260, 1607, 1725, 2129
BmeT110I	CYCGRG	3 cut(s)	355, 568, 1596
BmgBI	CACGTC	1 cut(s)	56
BmgT120I	GGNCC	5 cut(s)	260, 1340, 1607, 1725, 2129
BmiI	GGNNCC	4 cut(s)	238, 1341, 1708, 2080
BmrFI	CCNGG	4 cut(s)	504, 542, 1136, 1424
BmrI	ACTGGG	1 cut(s)	374
BmsI	GCATC	3 cut(s)	1168, 1909, 1936
BmuI	ACTGGG	1 cut(s)	374
BpiI	GAAGAC	1 cut(s)	347
BpmI	CTGGAG	2 cut(s)	840, 1667
BpuEI	CTTGAG	1 cut(s)	92
BpuMI	CCSGG	1 cut(s)	1136
BsaHI	GRCGYC	1 cut(s)	2115
BsaJI	CCNNGG	5 cut(s)	90, 502, 712, 1670, 2088
BsaWI	WCCGGW	4 cut(s)	66, 308, 1709, 1727
BsaXI	ACNNNNNCTCC	2 cut(s)	1456, 1486
Bsc4I	CCNNNNNNNGG	5 cut(s)	66, 573, 1190, 1219, 2094
Bse118I	RCCGGY	1 cut(s)	2033
Bse1I	ACTGG	5 cut(s)	200, 380, 857, 1179, 1560
Bse3DI	GCAATG	2 cut(s)	747, 915
BseAI	TCCGGA	3 cut(s)	66, 308, 1727
BseBI	CCWGG	3 cut(s)	504, 542, 1424
BseDI	CCNNGG	5 cut(s)	90, 502, 712, 1670, 2088
BseGI	GGATG	6 cut(s)	10, 397, 582, 1159, 1175, 1789
BseLI	CCNNNNNNNGG	5 cut(s)	66, 573, 1190, 1219, 2094
BseMI	GCAATG	2 cut(s)	747, 915
BseMII	CTCAG	4 cut(s)	411, 992, 1126, 1424
BseNI	ACTGG	5 cut(s)	200, 380, 857, 1179, 1560
BsePI	GCGCGC	1 cut(s)	1293
BseRI	GAGGAG	2 cut(s)	1647, 2197
BseXI	GCAGC	4 cut(s)	403, 808, 949, 1830
BseYI	CCCAGC	1 cut(s)	679
BsgI	GTGCAG	1 cut(s)	197
Bsh1236I	CGCG	4 cut(s)	1018, 1109, 1295, 2193
BshFI	GGCC	3 cut(s)	1043, 1342, 2056
BshNI	GGYRCC	1 cut(s)	1706
BsiHKAI	GWGCWC	2 cut(s)	324, 2010
BsiHKCI	CYCGRG	3 cut(s)	355, 568, 1596
BsiSI	CCGG	7 cut(s)	67, 309, 966, 1135, 1710, 1728, 2034
BslFI	GGGAC	2 cut(s)	241, 696
BslI	CCNNNNNNNGG	5 cut(s)	66, 573, 1190, 1219, 2094
BsmAI	GTCTC	1 cut(s)	2179
BsmFI	GGGAC	2 cut(s)	241, 696
BsmI	GAATGC	2 cut(s)	486, 2037
BsnI	GGCC	3 cut(s)	1043, 1342, 2056
BsoBI	CYCGRG	3 cut(s)	355, 568, 1596
Bsp1286I	GDGCHC	2 cut(s)	324, 2010
Bsp13I	TCCGGA	3 cut(s)	66, 308, 1727
Bsp1407I	TGTACA	1 cut(s)	1791
Bsp19I	CCATGG	1 cut(s)	712
Bsp68I	TCGCGA	1 cut(s)	1018
BspACI	CCGC	6 cut(s)	364, 731, 1059, 1397, 1401, 1967
BspANI	GGCC	3 cut(s)	1043, 1342, 2056
BspCNI	CTCAG	4 cut(s)	412, 993, 1125, 1425
BspEI	TCCGGA	3 cut(s)	66, 308, 1727
BspFNI	CGCG	4 cut(s)	1018, 1109, 1295, 2193
BspLI	GGNNCC	4 cut(s)	238, 1341, 1708, 2080
BspMAI	CTGCAG	1 cut(s)	1101
BspPI	GGATC	4 cut(s)	493, 625, 1938, 2192
BspQI	GCTCTTC	1 cut(s)	312
BspT107I	GGYRCC	1 cut(s)	1706
BsrDI	GCAATG	2 cut(s)	747, 915
BsrFI	RCCGGY	1 cut(s)	2033
BsrGI	TGTACA	1 cut(s)	1791
BsrI	ACTGG	5 cut(s)	200, 380, 857, 1179, 1560
BssAI	RCCGGY	1 cut(s)	2033
BssECI	CCNNGG	5 cut(s)	90, 502, 712, 1670, 2088
BssHII	GCGCGC	1 cut(s)	1293
BssNAI	GTATAC	1 cut(s)	453
BssNI	GRCGYC	1 cut(s)	2115
BssT1I	CCWWGG	4 cut(s)	90, 712, 1670, 2088
Bst1107I	GTATAC	1 cut(s)	453
Bst2UI	CCWGG	3 cut(s)	504, 542, 1424
Bst6I	CTCTTC	4 cut(s)	270, 312, 1533, 1614
BstACI	GRCGYC	1 cut(s)	2115
BstAPI	GCANNNNNTGC	2 cut(s)	299, 800
BstAUI	TGTACA	1 cut(s)	1791
BstC8I	GCNNGC	7 cut(s)	657, 1295, 1307, 1399, 1643, 1756, 1861
BstDEI	CTNAG	7 cut(s)	420, 562, 1001, 1112, 1390, 1433, 1759
BstDSI	CCRYGG	1 cut(s)	712
BstENI	CCTNNNNNAGG	1 cut(s)	1217
BstF5I	GGATG	6 cut(s)	10, 397, 582, 1159, 1175, 1789
BstFNI	CGCG	4 cut(s)	1018, 1109, 1295, 2193
BstHHI	GCGC	3 cut(s)	1111, 1295, 1297
BstMAI	GTCTC	1 cut(s)	2179
BstNI	CCWGG	3 cut(s)	504, 542, 1424
BstNSI	RCATGY	3 cut(s)	659, 938, 1693
BstSCI	CCNGG	4 cut(s)	502, 540, 1134, 1422
BstSFI	CTRYAG	5 cut(s)	231, 1065, 1097, 1983, 2234
BstUI	CGCG	4 cut(s)	1018, 1109, 1295, 2193
BstV1I	GCAGC	4 cut(s)	403, 808, 949, 1830
BstV2I	GAAGAC	1 cut(s)	347
BstX2I	RGATCY	2 cut(s)	498, 1257
BstXI	CCANNNNNNTGG	2 cut(s)	1186, 1546
BstYI	RGATCY	2 cut(s)	498, 1257
BstZ17I	GTATAC	1 cut(s)	453
BsuRI	GGCC	3 cut(s)	1043, 1342, 2056
BtgI	CCRYGG	1 cut(s)	712
BtgZI	GCGATG	1 cut(s)	831
BtrI	CACGTC	1 cut(s)	56
BtsCI	GGATG	6 cut(s)	10, 397, 582, 1159, 1175, 1789
BtsI	GCAGTG	1 cut(s)	1999
BtsIMutI	CAGTG	3 cut(s)	1332, 1447, 1999
BtuMI	TCGCGA	1 cut(s)	1018
Cac8I	GCNNGC	7 cut(s)	657, 1295, 1307, 1399, 1643, 1756, 1861
CaiI	CAGNNNCTG	2 cut(s)	1277, 1331
CfoI	GCGC	3 cut(s)	1111, 1295, 1297
Cfr10I	RCCGGY	1 cut(s)	2033
Cfr13I	GGNCC	5 cut(s)	260, 1340, 1607, 1725, 2129
CseI	GACGC	2 cut(s)	2092, 2104
Csp6I	GTAC	7 cut(s)	1102, 1478, 1707, 1792, 1804, 1825, 1925
CviQI	GTAC	7 cut(s)	1102, 1478, 1707, 1792, 1804, 1825, 1925
DdeI	CTNAG	7 cut(s)	420, 562, 1001, 1112, 1390, 1433, 1759
DraIII	CACNNNGTG	2 cut(s)	120, 1372
EaeI	YGGCCR	1 cut(s)	1041
Eam1104I	CTCTTC	4 cut(s)	270, 312, 1533, 1614
EarI	CTCTTC	4 cut(s)	270, 312, 1533, 1614
EciI	GGCGGA	2 cut(s)	353, 1982
Ecl136II	GAGCTC	1 cut(s)	322
Eco130I	CCWWGG	4 cut(s)	90, 712, 1670, 2088
Eco24I	GRGCYC	1 cut(s)	324
Eco32I	GATATC	2 cut(s)	643, 668
Eco47I	GGWCC	4 cut(s)	260, 1607, 1725, 2129
Eco53kI	GAGCTC	1 cut(s)	322
Eco57I	CTGAAG	2 cut(s)	330, 1935
Eco88I	CYCGRG	3 cut(s)	355, 568, 1596
EcoICRI	GAGCTC	1 cut(s)	322
EcoNI	CCTNNNNNAGG	1 cut(s)	1217
EcoO109I	RGGNCCY	1 cut(s)	1340
EcoRII	CCWGG	3 cut(s)	502, 540, 1422
EcoRV	GATATC	2 cut(s)	643, 668
EcoT14I	CCWWGG	4 cut(s)	90, 712, 1670, 2088
EcoT22I	ATGCAT	1 cut(s)	936
EcoT38I	GRGCYC	1 cut(s)	324
ErhI	CCWWGG	4 cut(s)	90, 712, 1670, 2088
FalI	AAGNNNNNCTT	2 cut(s)	31, 63
FaqI	GGGAC	2 cut(s)	241, 696
FauI	CCCGC	1 cut(s)	1390
FblI	GTMKAC	1 cut(s)	452
Fnu4HI	GCNGC	6 cut(s)	417, 732, 822, 963, 1402, 1844
FokI	GGATG	6 cut(s)	17, 404, 589, 1146, 1162, 1796
FriOI	GRGCYC	1 cut(s)	324
Fsp4HI	GCNGC	6 cut(s)	417, 732, 822, 963, 1402, 1844
FspBI	CTAG	2 cut(s)	167, 1671
GlaI	GCGC	3 cut(s)	1110, 1294, 1296
GluI	GCNGC	6 cut(s)	417, 732, 822, 963, 1402, 1844
GsaI	CCCAGC	1 cut(s)	683
GsuI	CTGGAG	2 cut(s)	840, 1667
HaeIII	GGCC	3 cut(s)	1043, 1342, 2056
HapII	CCGG	7 cut(s)	67, 309, 966, 1135, 1710, 1728, 2034
HgaI	GACGC	2 cut(s)	2092, 2104
HhaI	GCGC	3 cut(s)	1111, 1295, 1297
Hin1I	GRCGYC	1 cut(s)	2115
Hin6I	GCGC	3 cut(s)	1109, 1293, 1295
HinP1I	GCGC	3 cut(s)	1109, 1293, 1295
HincII	GTYRAC	1 cut(s)	2031
HindII	GTYRAC	1 cut(s)	2031
HinfI	GANTC	6 cut(s)	103, 1005, 1579, 1601, 1997, 2144
HpaI	GTTAAC	1 cut(s)	2031
HpaII	CCGG	7 cut(s)	67, 309, 966, 1135, 1710, 1728, 2034
HphI	GGTGA	2 cut(s)	203, 953
Hpy166II	GTNNAC	5 cut(s)	372, 453, 1447, 1565, 2031
Hpy188I	TCNGA	6 cut(s)	349, 1002, 1273, 1578, 1635, 1954
Hpy8I	GTNNAC	5 cut(s)	372, 453, 1447, 1565, 2031
Hpy99I	CGWCG	4 cut(s)	57, 1753, 2108, 2198
HpyAV	CCTTC	9 cut(s)	38, 57, 70, 257, 611, 931, 1014, 1061, 1454
HpyCH4IV	ACGT	2 cut(s)	55, 1590
HpyF3I	CTNAG	7 cut(s)	420, 562, 1001, 1112, 1390, 1433, 1759
HpySE526I	ACGT	2 cut(s)	55, 1590
Hsp92I	GRCGYC	1 cut(s)	2115
HspAI	GCGC	3 cut(s)	1109, 1293, 1295
Kpn2I	TCCGGA	3 cut(s)	66, 308, 1727
KpnI	GGTACC	1 cut(s)	1710
KspAI	GTTAAC	1 cut(s)	2031
LguI	GCTCTTC	1 cut(s)	312
LmnI	GCTCC	5 cut(s)	249, 327, 855, 1909, 1969
Lsp1109I	GCAGC	4 cut(s)	403, 808, 949, 1830
LweI	GCATC	3 cut(s)	1168, 1909, 1936
MaeI	CTAG	2 cut(s)	167, 1671
MaeII	ACGT	2 cut(s)	55, 1590
MaeIII	GTNAC	8 cut(s)	85, 191, 722, 841, 1436, 1591, 2169, 2219
MflI	RGATCY	2 cut(s)	498, 1257
MhlI	GDGCHC	2 cut(s)	324, 2010
MluCI	AATT	7 cut(s)	871, 1070, 1267, 1584, 1917, 2070, 2176
MlyI	GAGTC	2 cut(s)	97, 1573
MmeI	TCCRAC	2 cut(s)	1596, 1761
Mph1103I	ATGCAT	1 cut(s)	936
MroI	TCCGGA	3 cut(s)	66, 308, 1727
MroXI	GAANNNNTTC	2 cut(s)	1245, 1918
MseI	TTAA	4 cut(s)	512, 519, 1455, 2030
MslI	CAYNNNNRTG	2 cut(s)	939, 1544
MspI	CCGG	7 cut(s)	67, 309, 966, 1135, 1710, 1728, 2034
MspR9I	CCNGG	4 cut(s)	504, 542, 1136, 1424
Mva1269I	GAATGC	2 cut(s)	486, 2037
MvaI	CCWGG	3 cut(s)	504, 542, 1424
MvnI	CGCG	4 cut(s)	1018, 1109, 1295, 2193
NciI	CCSGG	1 cut(s)	1136
NcoI	CCATGG	1 cut(s)	712
NlaIV	GGNNCC	4 cut(s)	238, 1341, 1708, 2080
NmeAIII	GCCGAG	1 cut(s)	1019
NmuCI	GTSAC	6 cut(s)	191, 841, 1436, 1591, 2169, 2219
NruI	TCGCGA	1 cut(s)	1018
NsiI	ATGCAT	1 cut(s)	936
NspI	RCATGY	3 cut(s)	659, 938, 1693
PaeI	GCATGC	1 cut(s)	659
PaeR7I	CTCGAG	1 cut(s)	568
PauI	GCGCGC	1 cut(s)	1293
PciSI	GCTCTTC	1 cut(s)	312
PcsI	WCGNNNNNNNCGW	1 cut(s)	2112
PctI	GAATGC	2 cut(s)	486, 2037
PdmI	GAANNNNTTC	2 cut(s)	1245, 1918
PfeI	GAWTC	4 cut(s)	1005, 1601, 1997, 2144
PflFI	GACNNNGTC	1 cut(s)	1442
PflMI	CCANNNNNTGG	1 cut(s)	2094
PfoI	TCCNGGA	1 cut(s)	1134
PkrI	GCNGC	6 cut(s)	418, 733, 823, 964, 1403, 1845
PleI	GAGTC	2 cut(s)	97, 1573
PpsI	GAGTC	2 cut(s)	97, 1573
Psp124BI	GAGCTC	1 cut(s)	324
Psp6I	CCWGG	3 cut(s)	502, 540, 1422
PspFI	CCCAGC	1 cut(s)	679
PspGI	CCWGG	3 cut(s)	502, 540, 1422
PspN4I	GGNNCC	4 cut(s)	238, 1341, 1708, 2080
PspPI	GGNCC	5 cut(s)	260, 1340, 1607, 1725, 2129
PspXI	VCTCGAGB	1 cut(s)	568
PstI	CTGCAG	1 cut(s)	1101
PstNI	CAGNNNCTG	2 cut(s)	1277, 1331
PsuI	RGATCY	2 cut(s)	498, 1257
PsyI	GACNNNGTC	1 cut(s)	1442
PteI	GCGCGC	1 cut(s)	1293
RruI	TCGCGA	1 cut(s)	1018
RsaI	GTAC	7 cut(s)	1103, 1479, 1708, 1793, 1805, 1826, 1926
RsaNI	GTAC	7 cut(s)	1102, 1478, 1707, 1792, 1804, 1825, 1925
RseI	CAYNNNNRTG	2 cut(s)	939, 1544
SacI	GAGCTC	1 cut(s)	324
SapI	GCTCTTC	1 cut(s)	312
SaqAI	TTAA	4 cut(s)	512, 519, 1455, 2030
SatI	GCNGC	6 cut(s)	417, 732, 822, 963, 1402, 1844
Sau96I	GGNCC	5 cut(s)	260, 1340, 1607, 1725, 2129
SchI	GAGTC	2 cut(s)	97, 1573
ScrFI	CCNGG	4 cut(s)	504, 542, 1136, 1424
SduI	GDGCHC	2 cut(s)	324, 2010
SfaNI	GCATC	3 cut(s)	1168, 1909, 1936
SfcI	CTRYAG	5 cut(s)	231, 1065, 1097, 1983, 2234
Sfr274I	CTCGAG	1 cut(s)	568
SinI	GGWCC	4 cut(s)	260, 1607, 1725, 2129
SlaI	CTCGAG	1 cut(s)	568
SmiMI	CAYNNNNRTG	2 cut(s)	939, 1544
SmlI	CTYRAG	2 cut(s)	107, 568
SmoI	CTYRAG	2 cut(s)	107, 568
SphI	GCATGC	1 cut(s)	659
Sse9I	AATT	7 cut(s)	871, 1070, 1267, 1584, 1917, 2070, 2176
SsiI	CCGC	6 cut(s)	364, 731, 1059, 1397, 1401, 1967
SspI	AATATT	3 cut(s)	768, 1486, 1573
SspMI	CTAG	2 cut(s)	167, 1671
SstI	GAGCTC	1 cut(s)	324
StyD4I	CCNGG	4 cut(s)	502, 540, 1134, 1422
StyI	CCWWGG	4 cut(s)	90, 712, 1670, 2088
TaiI	ACGT	2 cut(s)	58, 1593
TaqI	TCGA	9 cut(s)	52, 287, 492, 569, 651, 1249, 1748, 2106, 2229
TasI	AATT	7 cut(s)	871, 1070, 1267, 1584, 1917, 2070, 2176
TatI	WGTACW	2 cut(s)	1101, 1791
TauI	GCSGC	2 cut(s)	734, 1404
TfiI	GAWTC	4 cut(s)	1005, 1601, 1997, 2144
Tru1I	TTAA	4 cut(s)	512, 519, 1455, 2030
Tru9I	TTAA	4 cut(s)	512, 519, 1455, 2030
TscAI	CASTG	3 cut(s)	1332, 1454, 1999
TseFI	GTSAC	6 cut(s)	191, 841, 1436, 1591, 2169, 2219
TseI	GCWGC	4 cut(s)	416, 821, 962, 1843
Tsp45I	GTSAC	6 cut(s)	191, 841, 1436, 1591, 2169, 2219
TspDTI	ATGAA	8 cut(s)	21, 121, 126, 139, 904, 1164, 1392, 1989
TspGWI	ACGGA	2 cut(s)	1198, 1602
TspRI	CASTG	3 cut(s)	1332, 1454, 1999
Tth111I	GACNNNGTC	1 cut(s)	1442
Van91I	CCANNNNNTGG	1 cut(s)	2094
VpaK11BI	GGWCC	4 cut(s)	260, 1607, 1725, 2129
XagI	CCTNNNNNAGG	1 cut(s)	1217
XapI	RAATTY	4 cut(s)	871, 1267, 1917, 2070
XceI	RCATGY	3 cut(s)	659, 938, 1693
XhoI	CTCGAG	1 cut(s)	568
XmaJI	CCTAGG	1 cut(s)	1670
XmiI	GTMKAC	1 cut(s)	452
XmnI	GAANNNNTTC	2 cut(s)	1245, 1918
XspI	CTAG	2 cut(s)	167, 1671
Zsp2I	ATGCAT	1 cut(s)	936

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.