Rw7G026840

Ferric reduction oxidase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
34169880 .. 34176345
6466 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G026840.1

Sequence Viewer

Length: 1626 bp
ATGGATAAAAGTTCTGTCCATAGGCCCCTTCTTTCGAGCCGAGGTTCTGGGCATGCTCATGCCCGGAAGACGCCTCTTTTTGTGAACTTGGCAAAATGGATTCTGAAGATTGCAATGGGACTGCTTTTTACTTTATGGGTTGCTCTAATATTTGTGTTCCCAGCAGAATTTGGGTCTGAACTATACCAAAAATGGGTTGCAGCGACCAGTGGAACTGTTTTTGGGGTCACAGGAAGCACGTTCCTGCTATTCAGCGGTCCCATTATCATCATTGCACTCCTTTCTGTAGTGTTTCTTATTATCTCCGGGGAAGAGGAGTTCCATGAGAAGAAGACTTCAAGTTATCCAAGTTTCCGCTTGTGGACATTTCCAGTTCTTGTGGATGGACCATTTGGTGTGGTTTCTGCTACTGAGTTTATTGGGATATTGCTTTTCATTGCGTTTGTTATCTGGGCTGTCTGTTCTTATACTGTGCGTATACTCAACTCCCTGTCTGCTGATAGCTCGACTTTCAAAGAGAATAGTTTGTTGTTCATGGAAATTTTGGGACTTCGTTTCGGCTTAATTGGCTTGTTTTGCTTCTCATTTTTGTTCCTGCCGATCTCAAGGGGATCAGTTCTTCTCCGCCTCATAAATATCCCTTTTGAGCATGCTACGAAATATCATGTATGGCTGGGACATCTAACAATGCTGCTCTTCACTGTCCATGGCCTTTTATACGTAGTGGCATGGACGATTGAGGGTAATCTCCTTCAGGAAATATTGTCATGGACTGATATTGGTATTGCCATTCTTCCGGGAGTAATCAGCCTCCTTGCTGGCCTCTTGATGTGGGTTACATCTATGCCTCCAGTGAGAAAGCTGAATTTTGAGTTATTCTTCTACACTCATCAGTTATATGTCATTTTTGTCGTCTTTTTGGCTTTGCACGTCGGTGATTTCCTTTTTGCATTTGCTGCTGGAGGCATATTTATTTTTCTTCTGGATCGTTTTCTAAGATTCTGTCAATCACGAAGGGTTGTTGATATAATTTCAGCAAAGTGCCTTCCATGTGGAACTGTAGAACTGGTTGTCGCCAAACCTGAAAATCTGCGGTACAATGCCCTCAGTTTTGTTTTTCTTCAAGTTCGGGAGCTATCATCGCTGCAGTGGCATCCTTTCAGTGTGTCATCCAGTCCTATGGATGGTAAATATCATATATCTGTGCTCATAAAGGTTCTTGGGAAATGGACAGAAAAGCTAAGAGGAAATATCTTGAAAAGCTCTGAGGATGTGCCGTGCAGTCTTCCTACAAAATTAACAGCTTCTGTTGAAGGGCCTTATGGGCATGAGATACCGTACCACATGATGTATGAGAATCTTATTTTAGTAGCTGGTGGCATTGGGATTTCCCCTTTCCTGGCCATCTTGAGTGACATTCTCCATTCTGTTCATCAAGGAAAGCCCTGTCTACCCAGAAATATCTTGATCGTATGGGCGGTCAAAAAATCAAATGAGCTTCCTCTTCTTTCAACCATTGACATGGAATCAACTTGTCCATCTTTCTCTACTAAACTAAATCTTCAGACTCATATTTATGTCACTCGGGAATCTGAACCTCCATTGGTATGTTTTATTATATTTTGA

Protein Analysis

541

Amino Acids

60.57

Weight (kDa)

8.48

Isoelectric Point (pI)

39.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ferric_reduct PF01794 186 - 307 6.6e-22 Ferric reductase like transmembrane component
FAD_binding_8 PF08022 342 - 443 1.9e-20 FAD-binding domain
NAD_binding_6 PF08030 451 - 532 2.4e-10 Ferric reductase NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 478, 1450
AciI CCGC 5 cut(s) 255, 355, 625, 1093, 1478
AclWI GGATC 2 cut(s) 619, 993
AcoI YGGCCR 1 cut(s) 1401
AcsI RAATTY 3 cut(s) 167, 540, 865
AcuI CTGAAG 3 cut(s) 125, 737, 1547
AcyI GRCGYC 1 cut(s) 71
AfaI GTAC 2 cut(s) 1097, 1340
AfiI CCNNNNNNNGG 3 cut(s) 193, 1184, 1399
AgsI TTSAA 6 cut(s) 339, 514, 1124, 1258, 1313, 1512
AjiI CACGTC 1 cut(s) 931
AjnI CCWGG 1 cut(s) 1398
AleI CACNNNNGTG 1 cut(s) 933
AloI GAACNNNNNNTCC 2 cut(s) 302, 334
AluBI AGCT 8 cut(s) 504, 862, 1135, 1240, 1263, 1304, 1373, 1498
AluI AGCT 8 cut(s) 504, 862, 1135, 1240, 1263, 1304, 1373, 1498
Alw21I GWGCWC 1 cut(s) 1209
AlwI GGATC 2 cut(s) 619, 993
AlwNI CAGNNNCTG 1 cut(s) 1307
Ama87I CYCGRG 1 cut(s) 1584
AoxI GGCC 5 cut(s) 23, 709, 820, 1316, 1401
ApeKI GCWGC 4 cut(s) 200, 691, 956, 1144
ApoI RAATTY 3 cut(s) 167, 540, 865
AspS9I GGNCC 4 cut(s) 24, 257, 386, 1316
AsuC2I CCSGG 3 cut(s) 64, 307, 798
AsuHPI GGTGA 1 cut(s) 947
AvaI CYCGRG 1 cut(s) 1584
AvaII GGWCC 2 cut(s) 257, 386
BalI TGGCCA 1 cut(s) 1403
BbsI GAAGAC 3 cut(s) 74, 338, 1277
Bbv12I GWGCWC 1 cut(s) 1209
BbvI GCAGC 4 cut(s) 212, 678, 943, 1131
BccI CCATC 4 cut(s) 377, 1178, 1412, 1546
BceAI ACGGC 1 cut(s) 1261
BciT130I CCWGG 1 cut(s) 1400
BcnI CCSGG 3 cut(s) 64, 307, 798
BfmI CTRYAG 3 cut(s) 285, 1059, 1145
BglI GCCNNNNNGGC 1 cut(s) 1324
BisI GCNGC 4 cut(s) 201, 692, 957, 1145
BlsI GCNGC 4 cut(s) 202, 693, 958, 1146
Bme1390I CCNGG 4 cut(s) 64, 307, 798, 1400
Bme18I GGWCC 2 cut(s) 257, 386
BmeT110I CYCGRG 1 cut(s) 1584
BmgBI CACGTC 1 cut(s) 931
BmgT120I GGNCC 4 cut(s) 24, 257, 386, 1316
BmiI GGNNCC 2 cut(s) 26, 259
BmrFI CCNGG 4 cut(s) 64, 307, 798, 1400
BmsI GCATC 1 cut(s) 1162
BpiI GAAGAC 3 cut(s) 74, 338, 1277
BpmI CTGGAG 2 cut(s) 834, 981
BpuEI CTTGAG 2 cut(s) 589, 1429
BpuMI CCSGG 3 cut(s) 64, 307, 798
BsaAI YACGTR 1 cut(s) 721
BsaHI GRCGYC 1 cut(s) 71
BsaJI CCNNGG 3 cut(s) 40, 306, 706
Bsc4I CCNNNNNNNGG 3 cut(s) 193, 1184, 1399
Bse1I ACTGG 5 cut(s) 207, 371, 851, 1071, 1173
Bse3DI GCAATG 3 cut(s) 120, 270, 435
BseBI CCWGG 1 cut(s) 1400
BseDI CCNNGG 3 cut(s) 40, 306, 706
BseGI GGATG 5 cut(s) 388, 1153, 1169, 1189, 1276
BseLI CCNNNNNNNGG 3 cut(s) 193, 1184, 1399
BseMI GCAATG 3 cut(s) 120, 270, 435
BseMII CTCAG 3 cut(s) 402, 1120, 1257
BseNI ACTGG 5 cut(s) 207, 371, 851, 1071, 1173
BseRI GAGGAG 1 cut(s) 329
BseXI GCAGC 4 cut(s) 212, 678, 943, 1131
BseYI CCCAGC 2 cut(s) 160, 673
BsgI GTGCAG 1 cut(s) 1300
BshFI GGCC 5 cut(s) 25, 711, 822, 1318, 1403
BsiHKAI GWGCWC 1 cut(s) 1209
BsiHKCI CYCGRG 1 cut(s) 1584
BsiSI CCGG 3 cut(s) 64, 306, 797
BslFI GGGAC 4 cut(s) 132, 243, 561, 690
BslI CCNNNNNNNGG 3 cut(s) 193, 1184, 1399
BsmFI GGGAC 4 cut(s) 132, 243, 561, 690
BsnI GGCC 5 cut(s) 25, 711, 822, 1318, 1403
BsoBI CYCGRG 1 cut(s) 1584
Bsp1286I GDGCHC 1 cut(s) 1209
Bsp143I GATC 4 cut(s) 600, 611, 985, 1467
Bsp19I CCATGG 1 cut(s) 706
BspACI CCGC 5 cut(s) 255, 355, 625, 1093, 1478
BspANI GGCC 5 cut(s) 25, 711, 822, 1318, 1403
BspCNI CTCAG 3 cut(s) 403, 1119, 1258
BspLI GGNNCC 2 cut(s) 26, 259
BspMAI CTGCAG 1 cut(s) 1149
BspPI GGATC 2 cut(s) 619, 993
BspQI GCTCTTC 1 cut(s) 701
BsrDI GCAATG 3 cut(s) 120, 270, 435
BsrI ACTGG 5 cut(s) 207, 371, 851, 1071, 1173
BssECI CCNNGG 3 cut(s) 40, 306, 706
BssMI GATC 4 cut(s) 600, 611, 985, 1467
BssNAI GTATAC 1 cut(s) 479
BssNI GRCGYC 1 cut(s) 71
BssT1I CCWWGG 1 cut(s) 706
Bst1107I GTATAC 1 cut(s) 479
Bst2UI CCWGG 1 cut(s) 1400
Bst4CI ACNGT 5 cut(s) 217, 472, 703, 1060, 1338
Bst6I CTCTTC 3 cut(s) 306, 701, 1509
BstACI GRCGYC 1 cut(s) 71
BstAPI GCANNNNNTGC 1 cut(s) 956
BstBAI YACGTR 1 cut(s) 721
BstC8I GCNNGC 3 cut(s) 54, 651, 820
BstDEI CTNAG 5 cut(s) 411, 995, 1106, 1241, 1266
BstDSI CCRYGG 1 cut(s) 706
BstF5I GGATG 5 cut(s) 388, 1153, 1169, 1189, 1276
BstKTI GATC 4 cut(s) 603, 614, 988, 1470
BstMBI GATC 4 cut(s) 600, 611, 985, 1467
BstMWI GCNNNNNNNGC 6 cut(s) 567, 576, 956, 1141, 1150, 1324
BstNI CCWGG 1 cut(s) 1400
BstNSI RCATGY 2 cut(s) 56, 653
BstSCI CCNGG 4 cut(s) 62, 305, 796, 1398
BstSFI CTRYAG 3 cut(s) 285, 1059, 1145
BstSNI TACGTA 1 cut(s) 721
BstV1I GCAGC 4 cut(s) 212, 678, 943, 1131
BstV2I GAAGAC 3 cut(s) 74, 338, 1277
BstXI CCANNNNNNTGG 2 cut(s) 1180, 1522
BstZ17I GTATAC 1 cut(s) 479
BsuRI GGCC 5 cut(s) 25, 711, 822, 1318, 1403
BtgI CCRYGG 1 cut(s) 706
BtgZI GCGATG 1 cut(s) 1125
BtrI CACGTC 1 cut(s) 931
BtsCI GGATG 5 cut(s) 388, 1153, 1169, 1189, 1276
BtsI GCAGTG 1 cut(s) 1154
BtsIMutI CAGTG 5 cut(s) 214, 699, 858, 1154, 1168
Cac8I GCNNGC 3 cut(s) 54, 651, 820
CaiI CAGNNNCTG 1 cut(s) 1307
Cfr13I GGNCC 4 cut(s) 24, 257, 386, 1316
CseI GACGC 1 cut(s) 79
Csp6I GTAC 2 cut(s) 1096, 1339
CviQI GTAC 2 cut(s) 1096, 1339
DdeI CTNAG 5 cut(s) 411, 995, 1106, 1241, 1266
DpnI GATC 4 cut(s) 602, 613, 987, 1469
DpnII GATC 4 cut(s) 600, 611, 985, 1467
EaeI YGGCCR 1 cut(s) 1401
Eam1104I CTCTTC 3 cut(s) 306, 701, 1509
EarI CTCTTC 3 cut(s) 306, 701, 1509
EciI GGCGGA 1 cut(s) 614
Eco105I TACGTA 1 cut(s) 721
Eco130I CCWWGG 1 cut(s) 706
Eco47I GGWCC 2 cut(s) 257, 386
Eco57I CTGAAG 3 cut(s) 125, 737, 1547
Eco88I CYCGRG 1 cut(s) 1584
EcoO109I RGGNCCY 2 cut(s) 24, 1316
EcoRII CCWGG 1 cut(s) 1398
EcoT14I CCWWGG 1 cut(s) 706
ErhI CCWWGG 1 cut(s) 706
FaqI GGGAC 4 cut(s) 132, 243, 561, 690
FblI GTMKAC 2 cut(s) 478, 1450
Fnu4HI GCNGC 4 cut(s) 201, 692, 957, 1145
FokI GGATG 5 cut(s) 395, 1140, 1156, 1196, 1283
Fsp4HI GCNGC 4 cut(s) 201, 692, 957, 1145
GluI GCNGC 4 cut(s) 201, 692, 957, 1145
GsaI CCCAGC 2 cut(s) 164, 677
GsuI CTGGAG 2 cut(s) 834, 981
HaeIII GGCC 5 cut(s) 25, 711, 822, 1318, 1403
HapII CCGG 3 cut(s) 64, 306, 797
HgaI GACGC 1 cut(s) 79
Hin1I GRCGYC 1 cut(s) 71
HinfI GANTC 6 cut(s) 100, 999, 1357, 1526, 1567, 1589
HpaII CCGG 3 cut(s) 64, 306, 797
HphI GGTGA 1 cut(s) 947
Hpy166II GTNNAC 4 cut(s) 85, 363, 479, 1451
Hpy188I TCNGA 5 cut(s) 105, 178, 1267, 1566, 1594
Hpy188III TCNNGA 9 cut(s) 755, 826, 983, 1011, 1130, 1255, 1408, 1465, 1586
Hpy8I GTNNAC 4 cut(s) 85, 363, 479, 1451
Hpy99I CGWCG 1 cut(s) 935
HpyAV CCTTC 5 cut(s) 38, 761, 1008, 1055, 1307
HpyCH4III ACNGT 5 cut(s) 217, 472, 703, 1060, 1338
HpyCH4IV ACGT 3 cut(s) 239, 720, 930
HpyCH4V TGCA 7 cut(s) 113, 200, 275, 928, 950, 1147, 1281
HpyF10VI GCNNNNNNNGC 6 cut(s) 567, 576, 956, 1141, 1150, 1324
HpyF3I CTNAG 5 cut(s) 411, 995, 1106, 1241, 1266
HpySE526I ACGT 3 cut(s) 239, 720, 930
Hsp92I GRCGYC 1 cut(s) 71
Kzo9I GATC 4 cut(s) 600, 611, 985, 1467
LguI GCTCTTC 1 cut(s) 701
LmnI GCTCC 1 cut(s) 1132
Lsp1109I GCAGC 4 cut(s) 212, 678, 943, 1131
LweI GCATC 1 cut(s) 1162
MaeII ACGT 3 cut(s) 239, 720, 930
MaeIII GTNAC 4 cut(s) 226, 835, 1412, 1579
MalI GATC 4 cut(s) 602, 613, 987, 1469
MboI GATC 4 cut(s) 600, 611, 985, 1467
MhlI GDGCHC 1 cut(s) 1209
MlsI TGGCCA 1 cut(s) 1403
MluCI AATT 6 cut(s) 167, 540, 564, 865, 1029, 1295
MluNI TGGCCA 1 cut(s) 1403
MlyI GAGTC 1 cut(s) 1561
Mox20I TGGCCA 1 cut(s) 1403
MscI TGGCCA 1 cut(s) 1403
MseI TTAA 2 cut(s) 563, 1298
MslI CAYNNNNRTG 5 cut(s) 57, 933, 1520, 1575, 1606
Msp20I TGGCCA 1 cut(s) 1403
MspA1I CMGCKG 1 cut(s) 255
MspI CCGG 3 cut(s) 64, 306, 797
MspR9I CCNGG 4 cut(s) 64, 307, 798, 1400
MvaI CCWGG 1 cut(s) 1400
MwoI GCNNNNNNNGC 6 cut(s) 567, 576, 956, 1141, 1150, 1324
NciI CCSGG 3 cut(s) 64, 307, 798
NcoI CCATGG 1 cut(s) 706
NdeII GATC 4 cut(s) 600, 611, 985, 1467
NlaIV GGNNCC 2 cut(s) 26, 259
NmeAIII GCCGAG 1 cut(s) 65
NmuCI GTSAC 3 cut(s) 226, 1412, 1579
NspI RCATGY 2 cut(s) 56, 653
OliI CACNNNNGTG 1 cut(s) 933
PaeI GCATGC 2 cut(s) 56, 653
PciSI GCTCTTC 1 cut(s) 701
PfeI GAWTC 5 cut(s) 100, 999, 1357, 1526, 1589
PfoI TCCNGGA 1 cut(s) 796
PkrI GCNGC 4 cut(s) 202, 693, 958, 1146
PleI GAGTC 1 cut(s) 1561
PpsI GAGTC 1 cut(s) 1561
Ppu21I YACGTR 1 cut(s) 721
Psp6I CCWGG 1 cut(s) 1398
PspFI CCCAGC 2 cut(s) 160, 673
PspGI CCWGG 1 cut(s) 1398
PspN4I GGNNCC 2 cut(s) 26, 259
PspPI GGNCC 4 cut(s) 24, 257, 386, 1316
PstI CTGCAG 1 cut(s) 1149
PstNI CAGNNNCTG 1 cut(s) 1307
RsaI GTAC 2 cut(s) 1097, 1340
RsaNI GTAC 2 cut(s) 1096, 1339
RseI CAYNNNNRTG 5 cut(s) 57, 933, 1520, 1575, 1606
SapI GCTCTTC 1 cut(s) 701
SaqAI TTAA 2 cut(s) 563, 1298
SatI GCNGC 4 cut(s) 201, 692, 957, 1145
Sau3AI GATC 4 cut(s) 600, 611, 985, 1467
Sau96I GGNCC 4 cut(s) 24, 257, 386, 1316
SchI GAGTC 1 cut(s) 1561
ScrFI CCNGG 4 cut(s) 64, 307, 798, 1400
SduI GDGCHC 1 cut(s) 1209
SfaNI GCATC 1 cut(s) 1162
SfcI CTRYAG 3 cut(s) 285, 1059, 1145
SinI GGWCC 2 cut(s) 257, 386
SmiMI CAYNNNNRTG 5 cut(s) 57, 933, 1520, 1575, 1606
SmlI CTYRAG 2 cut(s) 604, 1408
SmoI CTYRAG 2 cut(s) 604, 1408
SnaBI TACGTA 1 cut(s) 721
SphI GCATGC 2 cut(s) 56, 653
Sse9I AATT 6 cut(s) 167, 540, 564, 865, 1029, 1295
SsiI CCGC 5 cut(s) 255, 355, 625, 1093, 1478
SspI AATATT 2 cut(s) 150, 762
StyD4I CCNGG 4 cut(s) 62, 305, 796, 1398
StyI CCWWGG 1 cut(s) 706
TaaI ACNGT 5 cut(s) 217, 472, 703, 1060, 1338
TaiI ACGT 3 cut(s) 242, 723, 933
TaqI TCGA 2 cut(s) 35, 506
TasI AATT 6 cut(s) 167, 540, 564, 865, 1029, 1295
TfiI GAWTC 5 cut(s) 100, 999, 1357, 1526, 1589
Tru1I TTAA 2 cut(s) 563, 1298
Tru9I TTAA 2 cut(s) 563, 1298
TscAI CASTG 5 cut(s) 214, 706, 858, 1154, 1168
TseFI GTSAC 3 cut(s) 226, 1412, 1579
TseI GCWGC 4 cut(s) 200, 691, 956, 1144
Tsp45I GTSAC 3 cut(s) 226, 1412, 1579
TspDTI ATGAA 3 cut(s) 424, 523, 1421
TspRI CASTG 5 cut(s) 214, 706, 858, 1154, 1168
VpaK11BI GGWCC 2 cut(s) 257, 386
XapI RAATTY 3 cut(s) 167, 540, 865
XceI RCATGY 2 cut(s) 56, 653
XmiI GTMKAC 2 cut(s) 478, 1450
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.