Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0003400

Physical Location & Seq

Genomic Coordinates Forward (+)

33506219 .. 33514995

Gene Structure 8777 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00241260.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2328 bp

ATGGCCAATGCTGAAGCAGAATTACTATCTGCTCGTCTATATCAGCCTCTTCTTTCCAACTCCGCCGCCGATGGAGCTTCTAGCTCGAATGGCGGGAACAAGAACCGCTTCTTTTTGTCATTGTCGAAATGGGTTCTTAAATTTACAATGTGGTTAATTTTCATTGCATGGGTTGCTCTCTTTTTGTTAGCACCTACGGACCTTGGGACTACTCTCTCTAATTATTGGCTTGCTGCTACTGGTGGAACTCTATTTGGAGAAAGTGGGAGTGTACTGCTGTTATACAGCGGTCCAATTTTGGCTATCGCTATACTGGCTTTTCCATATATCATTATTGTTGGGAAAGAAGAACAACAGCTTCAAGAGTGTGCATGCAATACTCTTAAAGACCAGAATTGTTCGCCACATATCTTGTGTTTGTTAAAAAGTACATTAATCTACTCCAGGAAGAAGAAGTCCCCTCGATTCAACTTATGGACCTTTCCTGTTCTGGTGGATGGACAACTTGGAGTTGTCTCTGCTGCCGAATCGATCGGCATTATTCTCTTTGTTGTATTTGTTCTCTGGGATCTGTATGCATACACAGTAGTGAACTTTGAGCTGTTGGCCACCTATGGTGATTTGAGCCTTGGAGAAACAAGATTACTGTTTCTGCAAAATTTGGCGCGTAATCTTGGACAGATTGGCTTGGTTTGCTTGACATTTTTGTTCCTGCCGGTTGCAAAGGGATCAGTTCTTTTTCGCCTTATAAATATTCCTTTTGAGCATGCTACGAGATATCATGTGTGGCTGGGAAATCTCACGATGCTGCTCTTTACTATCCACGGCCTATTATATGTATTGATATGGACAATTAAGGGTTGTTTCCTTAATCAAATAATGGAGTGGAAGGATACTGGTGTTGCCAATCTTGCAGGACCAATTGGCCTTAGTGTTGGTCTGTTGATGTGGATCACAACACTTCCTCCAGTCAGAAAGCAGAATTTTGAGTTGTTCCTCTACACTCATCAGCTATACATCATCCTCCTGGTCTTTTTGGCTTTGCACATTGGTTATCTCGTTTTTCCTACAGCTGCAGGCCCCATATTTATTTTTGTTCTTGATCGTTTTCTGAGGTTCTGTCAATCACGAAAGAGTGTTGATATAATTTCAGCCAAGTGTCTTCCATGTGGAACTGTAGAGTTGGTCCTCTCAAAACCTGAAAGTTTGCGGTACAACGCCCTCAGTTTTGTTTTTGTTCGAATTTGGGAGCTATCATGGCTGCAATGGCATCCTTTCAGTGTTTCGTCCAGTCCTATGGATGGTAAATATCATATATCTGTTTTGATAAAGGCTGTTGGGAAATGGACTGAAAAGCTAAGAGATTCTGTCTTGAAAAATTTGGAGCTACCTTGCACAAAGTTAACAATTTCTGTTGAGGGTCCTTACGGGCATGAGAAACCGTACCACATGATGTATGAAAATCTCATCTTAGTAGCAGGTGGCATTGGGATTTCACCTTTCTTGGCTGTCTTAAGTGACATTCTCCACTCTGTTAAGGAAGGAAAACCTTGCCTACCAAGAAATATTTTACTTGTCTGGGCAGTCAAAAGATCAGATGAGCTTTCTCTTCTTTCAACCATTGGCATGGACTCAACTATCTGTCCATCTTTCTCTAATAAACTAAATCTTCAGGCCCATATTTACGTTACACGGGAGTCTGAATTTCCATCGGAACATGGTGAAGTTGGAAATAGTACTGCAGATTCTTCTGATCCATGTCCCATGTCCAAAAGGTCTGGAATGTCCGTTTTGGTTGGTACTGGACATAATGTATGGTCTTGCCTGTATGTTATCTCATCTACTTTAGGCTTTGTCATCTTGTTGGGTTTGTTGGATTTCTTCTACATCAACCCTTTTGATATAACTTCATGGTCATACAAAGGATTTCTATTCTTAGCCTGTATGGTGGCAAGTGTCTTCATCTTTGGTGGTCTGGTGGTTTGTTTATGGCATCTTTCGGAGAAAAGAACTTCAACAGAGGAAAAATGTGAGGATGATGAATCAAATTTTGGTAAGATTGAACACACAGAAACTGTAACTCACAATGTTGCACACCAGGAAAGTCCTGCAAGTTTAACCAGGAGCGTTCGTTATGGTGCAAGGCCAGACTTTAAAGAAATTTTTGGAAGCGTATCAAAGAATTGGGGCCATGTTGATGTGGGTGTCATTGTGTGTGGTCCTCCAACTCTTCAATCAAGTGTAGCTAAAGAAATCAGGTCACAAAGTATAAGAAGACAATCTGGAGATCCTATCTACCATTTCAACAGCCATAGCTTCAGTCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000293 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006091 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009767 GO:0009987 GO:0015979 GO:0016020 GO:0016491 GO:0016722 GO:0016723 GO:0019684 GO:0022900 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0055114 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

775

Amino Acids

86.39

Weight (kDa)

7.81

Isoelectric Point (pI)

44.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ferric_reduct	PF01794	225 - 346	3.3e-20	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	379 - 478	5.8e-20	FAD-binding domain
NAD_binding_6	PF08030	486 - 576	1.9e-11	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003400)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49730 AT5G49730 AT5G49740 AT5G49740 AT5G49740
fragaria_vesca	FvH4_5g27150 FvH4_5g27150 FvH4_5g27150 FvH4_5g27150 FvH4_5g27150
malus_domestica	MD08G1250800.v1.1 MD15G1140500.v1.1
prunus_persica	Prupe.1G587800_v2.0.a1 Prupe.1G587800_v2.0.a1
pyrus_communis	pycom08g21770 pycom15g12700
rosa_chinensis	RchiOBHm_Chr7g0218161 RchiOBHm_Chr7g0218171
rosa_laevigata	RLG00000002392
rosa_multiflora	Rmu_sc0003627.1_g000006 Rmu_sc0003627.1_g000007
rosa_roxburghii	Rroxscaffold_3G00241250 Rroxscaffold_3G00241260
rosa_rugosa	Rorug07G0174700 Rorug07G0174700 Rorug07G0174800
rosa_samantha	Rh7AG317100 Rh7AG317200 Rh7BG308300 Rh7BG315800 Rh7CG333900 Rh7CG334000 Rh7DG316000 Rh7DG316200
rosa_wichuraiana	Rw7G026830 Rw7G026840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	749
AarI	CACCTGC	1 cut(s)	1469
Acc36I	ACCTGC	1 cut(s)	1469
AccII	CGCG	1 cut(s)	667
AciI	CCGC	6 cut(s)	63, 66, 93, 106, 288, 1210
AclWI	GGATC	5 cut(s)	576, 736, 959, 1748, 2282
AcoI	YGGCCR	2 cut(s)	3, 606
AcsI	RAATTY	8 cut(s)	140, 658, 982, 1242, 1378, 1703, 2047, 2160
AcuI	CTGAAG	3 cut(s)	33, 1655, 2302
AfaI	GTAC	6 cut(s)	273, 430, 1214, 1445, 1738, 1801
AfiI	CCNNNNNNNGG	1 cut(s)	1301
AflII	CTTAAG	1 cut(s)	1513
AgsI	TTSAA	8 cut(s)	362, 469, 1375, 1617, 2016, 2063, 2234, 2305
AjnI	CCWGG	4 cut(s)	443, 1026, 2097, 2120
AjuI	GAANNNNNNNTTGG	2 cut(s)	2034, 2066
AleI	CACNNNNGTG	1 cut(s)	587
Alw26I	GTCTC	1 cut(s)	520
AlwI	GGATC	5 cut(s)	576, 736, 959, 1748, 2282
AlwNI	CAGNNNCTG	1 cut(s)	2075
AoxI	GGCC	8 cut(s)	3, 606, 826, 925, 1078, 1674, 2144, 2188
ApeKI	GCWGC	5 cut(s)	233, 521, 808, 1073, 1261
ApoI	RAATTY	8 cut(s)	140, 658, 982, 1242, 1378, 1703, 2047, 2160
AseI	ATTAAT	1 cut(s)	434
Asp700I	GAANNNNTTC	1 cut(s)	107
AspLEI	GCGC	1 cut(s)	667
AsuHPI	GGTGA	3 cut(s)	629, 1488, 1733
AsuII	TTCGAA	1 cut(s)	1240
AvaII	GGWCC	7 cut(s)	199, 290, 477, 917, 1186, 1421, 2219
BaeI	ACNNNNGTAYC	2 cut(s)	885, 918
BalI	TGGCCA	2 cut(s)	5, 608
BarI	GAAGNNNNNNTAC	1 cut(s)	38
BbsI	GAAGAC	3 cut(s)	1154, 1951, 2281
BbvI	GCAGC	5 cut(s)	220, 508, 795, 1060, 1248
BccI	CCATC	5 cut(s)	65, 491, 1295, 1654, 1717
BceAI	ACGGC	1 cut(s)	841
BciT130I	CCWGG	4 cut(s)	445, 1028, 2099, 2122
BciVI	GTATCC	1 cut(s)	886
BcoDI	GTCTC	1 cut(s)	520
BfaI	CTAG	1 cut(s)	81
BfmI	CTRYAG	4 cut(s)	1068, 1074, 1176, 1740
BfrI	CTTAAG	1 cut(s)	1513
BfuAI	ACCTGC	1 cut(s)	1469
BfuI	GTATCC	1 cut(s)	886
BisI	GCNGC	6 cut(s)	66, 234, 522, 809, 1074, 1262
BlsI	GCNGC	6 cut(s)	67, 235, 523, 810, 1075, 1263
BmcAI	AGTACT	1 cut(s)	1738
Bme1390I	CCNGG	4 cut(s)	445, 1028, 2099, 2122
Bme18I	GGWCC	7 cut(s)	199, 290, 477, 917, 1186, 1421, 2219
BmiI	GGNNCC	3 cut(s)	1081, 1422, 2189
BmrFI	CCNGG	4 cut(s)	445, 1028, 2099, 2122
BmsI	GCATC	3 cut(s)	795, 1279, 2002
BpiI	GAAGAC	3 cut(s)	1154, 1951, 2281
BpmI	CTGGAG	3 cut(s)	427, 951, 2304
Bpu14I	TTCGAA	1 cut(s)	1240
Bsa29I	ATCGAT	1 cut(s)	530
BsaBI	GATNNNNATC	1 cut(s)	950
BsaJI	CCNNGG	3 cut(s)	202, 628, 823
BsaXI	ACNNNNNCTCC	4 cut(s)	949, 979, 2116, 2146
Bsc4I	CCNNNNNNNGG	1 cut(s)	1301
Bse118I	RCCGGY	1 cut(s)	715
Bse1I	ACTGG	6 cut(s)	244, 318, 901, 968, 1290, 1807
Bse3DI	GCAATG	2 cut(s)	162, 1271
Bse8I	GATNNNNATC	1 cut(s)	950
BseBI	CCWGG	4 cut(s)	445, 1028, 2099, 2122
BseCI	ATCGAT	1 cut(s)	530
BseDI	CCNNGG	3 cut(s)	202, 628, 823
BseGI	GGATG	5 cut(s)	502, 1020, 1270, 1306, 2041
BseJI	GATNNNNATC	1 cut(s)	950
BseLI	CCNNNNNNNGG	1 cut(s)	1301
BseMI	GCAATG	2 cut(s)	162, 1271
BseMII	CTCAG	2 cut(s)	1103, 1237
BseNI	ACTGG	6 cut(s)	244, 318, 901, 968, 1290, 1807
BseXI	GCAGC	5 cut(s)	220, 508, 795, 1060, 1248
BseYI	CCCAGC	1 cut(s)	790
Bsh1236I	CGCG	1 cut(s)	667
Bsh1285I	CGRYCG	1 cut(s)	534
BshFI	GGCC	8 cut(s)	5, 608, 828, 927, 1080, 1676, 2146, 2190
BshVI	ATCGAT	1 cut(s)	530
BsiEI	CGRYCG	1 cut(s)	534
BsiSI	CCGG	1 cut(s)	716
BslFI	GGGAC	3 cut(s)	220, 442, 1746
BslI	CCNNNNNNNGG	1 cut(s)	1301
BsmAI	GTCTC	1 cut(s)	520
BsmFI	GGGAC	3 cut(s)	220, 442, 1746
BsnI	GGCC	8 cut(s)	5, 608, 828, 927, 1080, 1676, 2146, 2190
Bsp119I	TTCGAA	1 cut(s)	1240
Bsp143I	GATC	8 cut(s)	531, 568, 728, 951, 1102, 1592, 1753, 2287
BspACI	CCGC	6 cut(s)	63, 66, 93, 106, 288, 1210
BspANI	GGCC	8 cut(s)	5, 608, 828, 927, 1080, 1676, 2146, 2190
BspCNI	CTCAG	2 cut(s)	1104, 1236
BspDI	ATCGAT	1 cut(s)	530
BspFNI	CGCG	1 cut(s)	667
BspLI	GGNNCC	3 cut(s)	1081, 1422, 2189
BspMAI	CTGCAG	2 cut(s)	1078, 1744
BspMI	ACCTGC	1 cut(s)	1469
BspPI	GGATC	5 cut(s)	576, 736, 959, 1748, 2282
BspT104I	TTCGAA	1 cut(s)	1240
BspTI	CTTAAG	1 cut(s)	1513
BsrDI	GCAATG	2 cut(s)	162, 1271
BsrFI	RCCGGY	1 cut(s)	715
BsrI	ACTGG	6 cut(s)	244, 318, 901, 968, 1290, 1807
BssAI	RCCGGY	1 cut(s)	715
BssECI	CCNNGG	3 cut(s)	202, 628, 823
BssMI	GATC	8 cut(s)	531, 568, 728, 951, 1102, 1592, 1753, 2287
BssT1I	CCWWGG	2 cut(s)	202, 628
Bst2UI	CCWGG	4 cut(s)	445, 1028, 2099, 2122
Bst4CI	ACNGT	5 cut(s)	586, 648, 1177, 1443, 2077
Bst6I	CTCTTC	3 cut(s)	54, 1614, 2235
BstAFI	CTTAAG	1 cut(s)	1513
BstAPI	GCANNNNNTGC	1 cut(s)	173
BstBI	TTCGAA	1 cut(s)	1240
BstC8I	GCNNGC	4 cut(s)	231, 373, 768, 1078
BstDEI	CTNAG	6 cut(s)	929, 1112, 1223, 1358, 1471, 1936
BstDSI	CCRYGG	1 cut(s)	823
BstF5I	GGATG	5 cut(s)	502, 1020, 1270, 1306, 2041
BstFNI	CGCG	1 cut(s)	667
BstHHI	GCGC	1 cut(s)	667
BstKTI	GATC	8 cut(s)	534, 571, 731, 954, 1105, 1595, 1756, 2290
BstMAI	GTCTC	1 cut(s)	520
BstMBI	GATC	8 cut(s)	531, 568, 728, 951, 1102, 1592, 1753, 2287
BstMCI	CGRYCG	1 cut(s)	534
BstMWI	GCNNNNNNNGC	8 cut(s)	74, 90, 173, 314, 693, 911, 1258, 1267
BstNI	CCWGG	4 cut(s)	445, 1028, 2099, 2122
BstNSI	RCATGY	2 cut(s)	375, 770
BstSCI	CCNGG	4 cut(s)	443, 1026, 2097, 2120
BstSFI	CTRYAG	4 cut(s)	1068, 1074, 1176, 1740
BstUI	CGCG	1 cut(s)	667
BstV1I	GCAGC	5 cut(s)	220, 508, 795, 1060, 1248
BstV2I	GAAGAC	3 cut(s)	1154, 1951, 2281
BstX2I	RGATCY	2 cut(s)	568, 2287
BstXI	CCANNNNNNTGG	2 cut(s)	1297, 1627
BstYI	RGATCY	2 cut(s)	568, 2287
Bsu15I	ATCGAT	1 cut(s)	530
BsuI	GTATCC	1 cut(s)	886
BsuRI	GGCC	8 cut(s)	5, 608, 828, 927, 1080, 1676, 2146, 2190
BsuTUI	ATCGAT	1 cut(s)	530
BtgI	CCRYGG	1 cut(s)	823
BtsCI	GGATG	5 cut(s)	502, 1020, 1270, 1306, 2041
BtsIMutI	CAGTG	1 cut(s)	1285
BveI	ACCTGC	1 cut(s)	1469
Cac8I	GCNNGC	4 cut(s)	231, 373, 768, 1078
CaiI	CAGNNNCTG	1 cut(s)	2075
CfoI	GCGC	1 cut(s)	667
Cfr10I	RCCGGY	1 cut(s)	715
ClaI	ATCGAT	1 cut(s)	530
Csp6I	GTAC	6 cut(s)	272, 429, 1213, 1444, 1737, 1800
CspCI	CAANNNNNGTGG	2 cut(s)	393, 428
CviQI	GTAC	6 cut(s)	272, 429, 1213, 1444, 1737, 1800
DdeI	CTNAG	6 cut(s)	929, 1112, 1223, 1358, 1471, 1936
DpnI	GATC	8 cut(s)	533, 570, 730, 953, 1104, 1594, 1755, 2289
DpnII	GATC	8 cut(s)	531, 568, 728, 951, 1102, 1592, 1753, 2287
DraI	TTTAAA	1 cut(s)	2155
EaeI	YGGCCR	2 cut(s)	3, 606
Eam1104I	CTCTTC	3 cut(s)	54, 1614, 2235
EarI	CTCTTC	3 cut(s)	54, 1614, 2235
EciI	GGCGGA	1 cut(s)	52
Eco130I	CCWWGG	2 cut(s)	202, 628
Eco32I	GATATC	1 cut(s)	779
Eco47I	GGWCC	7 cut(s)	199, 290, 477, 917, 1186, 1421, 2219
Eco57I	CTGAAG	3 cut(s)	33, 1655, 2302
EcoO109I	RGGNCCY	2 cut(s)	1079, 1421
EcoRII	CCWGG	4 cut(s)	443, 1026, 2097, 2120
EcoRV	GATATC	1 cut(s)	779
EcoT14I	CCWWGG	2 cut(s)	202, 628
EcoT22I	ATGCAT	1 cut(s)	580
ErhI	CCWWGG	2 cut(s)	202, 628
FalI	AAGNNNNNCTT	2 cut(s)	92, 124
FaqI	GGGAC	3 cut(s)	220, 442, 1746
FauI	CCCGC	1 cut(s)	86
Fnu4HI	GCNGC	6 cut(s)	66, 234, 522, 809, 1074, 1262
FokI	GGATG	5 cut(s)	509, 1007, 1257, 1313, 2048
Fsp4HI	GCNGC	6 cut(s)	66, 234, 522, 809, 1074, 1262
FspBI	CTAG	1 cut(s)	81
GlaI	GCGC	1 cut(s)	666
GluI	GCNGC	6 cut(s)	66, 234, 522, 809, 1074, 1262
GsaI	CCCAGC	1 cut(s)	794
GsuI	CTGGAG	3 cut(s)	427, 951, 2304
HaeIII	GGCC	8 cut(s)	5, 608, 828, 927, 1080, 1676, 2146, 2190
HapII	CCGG	1 cut(s)	716
HhaI	GCGC	1 cut(s)	667
Hin6I	GCGC	1 cut(s)	665
HinP1I	GCGC	1 cut(s)	665
HincII	GTYRAC	1 cut(s)	1404
HindII	GTYRAC	1 cut(s)	1404
HinfI	GANTC	7 cut(s)	465, 527, 1364, 1631, 1697, 1745, 2042
HpaI	GTTAAC	1 cut(s)	1404
HpaII	CCGG	1 cut(s)	716
HphI	GGTGA	3 cut(s)	629, 1488, 1733
Hpy166II	GTNNAC	3 cut(s)	272, 592, 1404
Hpy188I	TCNGA	7 cut(s)	974, 1113, 1597, 1702, 1714, 1753, 2002
Hpy188III	TCNNGA	7 cut(s)	362, 802, 1100, 1128, 1372, 1779, 2283
Hpy8I	GTNNAC	3 cut(s)	272, 592, 1404
HpyAV	CCTTC	2 cut(s)	883, 1535
HpyCH4III	ACNGT	5 cut(s)	586, 648, 1177, 1443, 2077
HpyCH4IV	ACGT	1 cut(s)	1686
HpyF10VI	GCNNNNNNNGC	8 cut(s)	74, 90, 173, 314, 693, 911, 1258, 1267
HpyF3I	CTNAG	6 cut(s)	929, 1112, 1223, 1358, 1471, 1936
HpySE526I	ACGT	1 cut(s)	1686
HspAI	GCGC	1 cut(s)	665
KspAI	GTTAAC	1 cut(s)	1404
Kzo9I	GATC	8 cut(s)	531, 568, 728, 951, 1102, 1592, 1753, 2287
LmnI	GCTCC	4 cut(s)	74, 1249, 1384, 2124
Lsp1109I	GCAGC	5 cut(s)	220, 508, 795, 1060, 1248
LweI	GCATC	3 cut(s)	795, 1279, 2002
MaeI	CTAG	1 cut(s)	81
MaeII	ACGT	1 cut(s)	1686
MaeIII	GTNAC	4 cut(s)	1517, 1687, 2077, 2259
MalI	GATC	8 cut(s)	533, 570, 730, 953, 1104, 1594, 1755, 2289
MboI	GATC	8 cut(s)	531, 568, 728, 951, 1102, 1592, 1753, 2287
MfeI	CAATTG	1 cut(s)	921
MflI	RGATCY	2 cut(s)	568, 2287
MlsI	TGGCCA	2 cut(s)	5, 608
MluNI	TGGCCA	2 cut(s)	5, 608
MlyI	GAGTC	2 cut(s)	1625, 1706
MmeI	TCCRAC	4 cut(s)	81, 1708, 1854, 2249
Mox20I	TGGCCA	2 cut(s)	5, 608
Mph1103I	ATGCAT	1 cut(s)	580
MroXI	GAANNNNTTC	1 cut(s)	107
MscI	TGGCCA	2 cut(s)	5, 608
MslI	CAYNNNNRTG	3 cut(s)	587, 1625, 2196
Msp20I	TGGCCA	2 cut(s)	5, 608
MspA1I	CMGCKG	2 cut(s)	288, 1073
MspCI	CTTAAG	1 cut(s)	1513
MspI	CCGG	1 cut(s)	716
MspR9I	CCNGG	4 cut(s)	445, 1028, 2099, 2122
MunI	CAATTG	1 cut(s)	921
MvaI	CCWGG	4 cut(s)	445, 1028, 2099, 2122
MvnI	CGCG	1 cut(s)	667
MwoI	GCNNNNNNNGC	8 cut(s)	74, 90, 173, 314, 693, 911, 1258, 1267
NdeII	GATC	8 cut(s)	531, 568, 728, 951, 1102, 1592, 1753, 2287
NlaIV	GGNNCC	3 cut(s)	1081, 1422, 2189
NmuCI	GTSAC	2 cut(s)	1517, 2259
NsiI	ATGCAT	1 cut(s)	580
NspI	RCATGY	2 cut(s)	375, 770
NspV	TTCGAA	1 cut(s)	1240
OliI	CACNNNNGTG	1 cut(s)	587
PaeI	GCATGC	2 cut(s)	375, 770
PaqCI	CACCTGC	1 cut(s)	1469
PdmI	GAANNNNTTC	1 cut(s)	107
PfeI	GAWTC	5 cut(s)	465, 527, 1364, 1745, 2042
PfoI	TCCNGGA	1 cut(s)	443
PkrI	GCNGC	6 cut(s)	67, 235, 523, 810, 1075, 1263
Ple19I	CGATCG	1 cut(s)	534
PleI	GAGTC	2 cut(s)	1625, 1705
PpsI	GAGTC	2 cut(s)	1625, 1705
PpuMI	RGGWCCY	1 cut(s)	1421
PshBI	ATTAAT	1 cut(s)	434
PsiI	TTATAA	1 cut(s)	749
Psp5II	RGGWCCY	1 cut(s)	1421
Psp6I	CCWGG	4 cut(s)	443, 1026, 2097, 2120
PspFI	CCCAGC	1 cut(s)	790
PspGI	CCWGG	4 cut(s)	443, 1026, 2097, 2120
PspN4I	GGNNCC	3 cut(s)	1081, 1422, 2189
PspPPI	RGGWCCY	1 cut(s)	1421
PstI	CTGCAG	2 cut(s)	1078, 1744
PstNI	CAGNNNCTG	1 cut(s)	2075
PsuI	RGATCY	2 cut(s)	568, 2287
PvuI	CGATCG	1 cut(s)	534
PvuII	CAGCTG	1 cut(s)	1073
RsaI	GTAC	6 cut(s)	273, 430, 1214, 1445, 1738, 1801
RsaNI	GTAC	6 cut(s)	272, 429, 1213, 1444, 1737, 1800
RseI	CAYNNNNRTG	3 cut(s)	587, 1625, 2196
SatI	GCNGC	6 cut(s)	66, 234, 522, 809, 1074, 1262
Sau3AI	GATC	8 cut(s)	531, 568, 728, 951, 1102, 1592, 1753, 2287
ScaI	AGTACT	1 cut(s)	1738
SchI	GAGTC	2 cut(s)	1625, 1706
ScrFI	CCNGG	4 cut(s)	445, 1028, 2099, 2122
SfaNI	GCATC	3 cut(s)	795, 1279, 2002
SfcI	CTRYAG	4 cut(s)	1068, 1074, 1176, 1740
SfuI	TTCGAA	1 cut(s)	1240
SinI	GGWCC	7 cut(s)	199, 290, 477, 917, 1186, 1421, 2219
SmiMI	CAYNNNNRTG	3 cut(s)	587, 1625, 2196
SmlI	CTYRAG	1 cut(s)	1513
SmoI	CTYRAG	1 cut(s)	1513
SphI	GCATGC	2 cut(s)	375, 770
SsiI	CCGC	6 cut(s)	63, 66, 93, 106, 288, 1210
SspI	AATATT	2 cut(s)	754, 1567
SspMI	CTAG	1 cut(s)	81
StyD4I	CCNGG	4 cut(s)	443, 1026, 2097, 2120
StyI	CCWWGG	2 cut(s)	202, 628
TaaI	ACNGT	5 cut(s)	586, 648, 1177, 1443, 2077
TaiI	ACGT	1 cut(s)	1689
TaqI	TCGA	5 cut(s)	86, 125, 463, 530, 1240
TatI	WGTACW	3 cut(s)	271, 428, 1736
TauI	GCSGC	1 cut(s)	68
TfiI	GAWTC	5 cut(s)	465, 527, 1364, 1745, 2042
TscAI	CASTG	1 cut(s)	1285
TseFI	GTSAC	2 cut(s)	1517, 2259
TseI	GCWGC	5 cut(s)	233, 521, 808, 1073, 1261
Tsp45I	GTSAC	2 cut(s)	1517, 2259
TspDTI	ATGAA	5 cut(s)	151, 1473, 1899, 1951, 2055
TspGWI	ACGGA	2 cut(s)	212, 1777
TspRI	CASTG	1 cut(s)	1285
Vha464I	CTTAAG	1 cut(s)	1513
VpaK11BI	GGWCC	7 cut(s)	199, 290, 477, 917, 1186, 1421, 2219
VspI	ATTAAT	1 cut(s)	434
XapI	RAATTY	8 cut(s)	140, 658, 982, 1242, 1378, 1703, 2047, 2160
XceI	RCATGY	2 cut(s)	375, 770
XmnI	GAANNNNTTC	1 cut(s)	107
XspI	CTAG	1 cut(s)	81
ZrmI	AGTACT	1 cut(s)	1738
Zsp2I	ATGCAT	1 cut(s)	580

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.