Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0003400

Physical Location & Seq

Genomic Coordinates Reverse (-)

37030009 .. 37041447

Gene Structure 11439 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG333900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2394 bp

ATGGCCAATGGTGAATCAGAAATACTCTCTGCTCGTCTATATCAGCCGCTTCTTTCCAATTCCGCTGCCGACGTAGCTCCTTGTTCAAATGGCGGGAACAAGAACCGCTTCTTTTTGTCATTGTCGAAATGGGTTCTCAAATTTACAATGTGGTTAATTTTCATTGCATGGGTTGCTCTCTTTTTATTAGTACCTACGGATCTTGGGACTACTCTATCTAATGATTGGCTTGCTGCTACTGGTGGAACTCTATTTGGAGACAGTGGGAGTGTATTGCTGTTATTCAGCGGTCCAATTTTGGCTATTGCTTTACTTGCTTTTCCATATATCATTATTGTTGGGGAAGAAGAACAACAGCTTCAAGAGTATGCATGCAATACTCTTAAAGACCGGAATTGTACGGCGCCTATCTTGTGTTCGTTAAAAAGCACATTAATCTACTACAGGAAGAAGAAGCCCCCTCGATTCAACTTATGGACCTTTCCTGTTCTGGTGGATGGACCATTTGGAGTTGTCTCTGCTGCCGAATTGATCGGCATTATTCTCTTTATTGTATTTGTTCTCTGGGATCTGTATGCATTCACAGCAGTGAACTTTGGGCTGTTAGCCACCTACGATGATTTGAGCCTTGGAGAAACAAGATTAATGTTTCTGCACAATTTGGCGCGTAATCTTGGACAGATTGGCTTGGTTTGCTTGACATTTTTGTTCCTGCCGGTTGCAAGGGGATCAATTCTATTTCGCCTTATAAATATTCCTTTTGAGCATGCTACGAGGTATCATGTGTGGCTGGGAAATCTCGCAATGCTGCTCTTTGCTATCCACGGCCTGTTATATGTATTGATATGGACAATTAAGGGTTGTGTCCTTAGTCAAATATTGGAGTGGAAGGATACTGGTGTTGCCAATCTTGCAGGATCAATTAGCCTTAGTGTTGGTCTGTTGATGTGGATCACAACACTTCCTCCGGTCAGAAAGCGGAATTTCGAGTTGTTCTTCTACACTCATCAGCTATACGTCATCTTCGTGGTCTTTTTGGCTTTGCACATTGGTTATCTCGTTTTTCCTACAGCTGCAGGCCCCATATTTATTTTTGTTCTTGATCGTTTTCTGAGGTTCTGTCAATCACGAAAGATTGTTGATATAATTTCAGCCAAGTGCCTTCCATGTGGAACTGTAGAGTTGGTCCTTGCAAAACCCGAAAGTTTGCGGTACAACGCCCTCAGTTTTGTCTTTGTTCGAATTTGGGAGCTATCAAGGCTGCAATGGCATCCTTTCAGTGTTTCGTCCAGTCCTATGGATGGTAAACATCATATATCTGTTTTGATAAAGGCTATTGGGAAATGGACTGAAAAGCTAAGAGATTCTGTCTTGAAAAATTTGGAGCTACCTTGCACAAAGTTAACAATTTCTGTTGAGGGTCCTTACGGGCATGAAAAACCGTACCACATGATGTATGAAAATCTCATCTTAGTAGCAGGTGGCATTGGGATTTCACCTTTCTTGGCTGTCTTAAGTGACATTCTCCACTCTGTTAAGGAAGGAAAACCTTGCCTACCAAGAAATATTTTACTTGTCTGGGCAGTCAAAAGATCAGATGAGCTTTCTCTTCTTTCAACCATTGGCATGGACTCAACTATCTATCCATCTTTCTCTAATAAACTAAATCTTCAGGCCCATATTTACGTTACTCGGGAGTCTGAATTTCCATCGGAACATGGTGAAGTTGGAAATAGTACTGCAGATTCTTCTGATCTATGTCCCATGTCCAAAAGGTCTGGAATGTCCGTTTTGGTTGGTACTGGACATAATGTATGGTCTTGCCTGTATGTTATCTCATCTACTTTAGGCTTTGTCATCTTGTTGGGTTTGTTGGATTTCTTCTACATCAACCCTTTTGATATAACTTCATGGTCATACAAAGGATTTCTATTCTTAGCCTGTATGGTCGCAAGTGTCTTCATCTTTGGTGGTCTGGTGGTTTGTTTATGGCATCTTTCGGAGAAAAGAACTTCAGCAGAGGAAAAATGTGAGGATGATGAATCAAATTTTGGTAAGATTGAGCACACAGAAACTGTAACTTACAATGTTGCACACCAGGAAAGTCCTGCAAGTTTAACCAGGAGCATTCGTTATGGTGCAAGGCCAGACTTTAAAGAAATTTTTGGAAGCGTATCAAAGAATTGGGGCCATGTTGATGTGGGTGTCATTGTGTGTGGTCCTCCAACTCTTCAATCAAGTGTAGCTAAAGAAATCAGGCATCCTAGTTTCTTGTTGCAAGGTATAACTGGAAGGAGTAAAAGCTTATCTAAAATTGCTTGGAAGTTGAGTAGACAATCACAGGAGCTCAACTTTGCTGACTGTTTGGTGCTAGCTTGTTTGGTAGTACAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000293 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006091 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009767 GO:0009987 GO:0015979 GO:0016020 GO:0016491 GO:0016722 GO:0016723 GO:0019684 GO:0022900 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0055114 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

797

Amino Acids

88.87

Weight (kDa)

8.15

Isoelectric Point (pI)

43.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ferric_reduct	PF01794	225 - 346	1.5e-21	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	380 - 478	3.2e-19	FAD-binding domain
NAD_binding_6	PF08030	486 - 579	1.8e-11	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003400)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49730 AT5G49730 AT5G49740 AT5G49740 AT5G49740
fragaria_vesca	FvH4_5g27150 FvH4_5g27150 FvH4_5g27150 FvH4_5g27150 FvH4_5g27150
malus_domestica	MD08G1250800.v1.1 MD15G1140500.v1.1
prunus_persica	Prupe.1G587800_v2.0.a1 Prupe.1G587800_v2.0.a1
pyrus_communis	pycom08g21770 pycom15g12700
rosa_chinensis	RchiOBHm_Chr7g0218161 RchiOBHm_Chr7g0218171
rosa_laevigata	RLG00000002392
rosa_multiflora	Rmu_sc0003627.1_g000006 Rmu_sc0003627.1_g000007
rosa_roxburghii	Rroxscaffold_3G00241250 Rroxscaffold_3G00241260
rosa_rugosa	Rorug07G0174700 Rorug07G0174700 Rorug07G0174800
rosa_samantha	Rh7AG317100 Rh7AG317200 Rh7BG308300 Rh7BG315800 Rh7CG333900 Rh7CG334000 Rh7DG316000 Rh7DG316200
rosa_wichuraiana	Rw7G026830 Rw7G026840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	749
AarI	CACCTGC	1 cut(s)	1469
Acc36I	ACCTGC	1 cut(s)	1469
AccB1I	GGYRCC	1 cut(s)	403
AccI	GTMKAC	1 cut(s)	2332
AccII	CGCG	1 cut(s)	667
AciI	CCGC	7 cut(s)	47, 63, 93, 106, 288, 979, 1210
AclWI	GGATC	5 cut(s)	207, 576, 736, 925, 959
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	7 cut(s)	140, 982, 1242, 1378, 1703, 2047, 2160
AcuI	CTGAAG	2 cut(s)	1655, 1998
AcyI	GRCGYC	1 cut(s)	404
AfaI	GTAC	7 cut(s)	192, 400, 1214, 1445, 1738, 1801, 2388
AfiI	CCNNNNNNNGG	1 cut(s)	1301
AflII	CTTAAG	1 cut(s)	1513
AgsI	TTSAA	6 cut(s)	87, 362, 469, 1375, 1617, 2234
AjnI	CCWGG	2 cut(s)	2097, 2120
AjuI	GAANNNNNNNTTGG	2 cut(s)	2034, 2066
AleI	CACNNNNGTG	1 cut(s)	587
Alw21I	GWGCWC	2 cut(s)	2067, 2349
Alw26I	GTCTC	2 cut(s)	252, 520
AlwI	GGATC	5 cut(s)	207, 576, 736, 925, 959
AlwNI	CAGNNNCTG	1 cut(s)	2075
Ama87I	CYCGRG	1 cut(s)	1692
AoxI	GGCC	6 cut(s)	3, 826, 1078, 1674, 2144, 2188
ApeKI	GCWGC	6 cut(s)	65, 233, 521, 808, 1073, 1261
ApoI	RAATTY	7 cut(s)	140, 982, 1242, 1378, 1703, 2047, 2160
AseI	ATTAAT	2 cut(s)	434, 644
Asp700I	GAANNNNTTC	1 cut(s)	107
AspLEI	GCGC	2 cut(s)	406, 667
AspS9I	GGNCC	9 cut(s)	290, 477, 500, 1079, 1186, 1421, 1675, 2188, 2219
AsuHPI	GGTGA	3 cut(s)	23, 1488, 1733
AsuII	TTCGAA	1 cut(s)	1240
AsuNHI	GCTAGC	1 cut(s)	2371
AvaI	CYCGRG	1 cut(s)	1692
AvaII	GGWCC	6 cut(s)	290, 477, 500, 1186, 1421, 2219
BaeI	ACNNNNGTAYC	2 cut(s)	885, 918
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	1 cut(s)	403
BanII	GRGCYC	1 cut(s)	2349
BbsI	GAAGAC	1 cut(s)	1951
Bbv12I	GWGCWC	2 cut(s)	2067, 2349
BbvI	GCAGC	6 cut(s)	52, 220, 508, 795, 1060, 1248
BccI	CCATC	4 cut(s)	491, 1295, 1654, 1717
BceAI	ACGGC	2 cut(s)	417, 841
BciT130I	CCWGG	2 cut(s)	2099, 2122
BciVI	GTATCC	1 cut(s)	886
BcoDI	GTCTC	2 cut(s)	252, 520
BfaI	CTAG	2 cut(s)	2265, 2372
BfmI	CTRYAG	5 cut(s)	442, 1068, 1074, 1176, 1740
BfoI	RGCGCY	1 cut(s)	407
BfrI	CTTAAG	1 cut(s)	1513
BfuAI	ACCTGC	1 cut(s)	1469
BfuI	GTATCC	1 cut(s)	886
BisI	GCNGC	7 cut(s)	47, 66, 234, 522, 809, 1074, 1262
BlsI	GCNGC	7 cut(s)	48, 67, 235, 523, 810, 1075, 1263
BmcAI	AGTACT	1 cut(s)	1738
Bme1390I	CCNGG	2 cut(s)	2099, 2122
Bme18I	GGWCC	6 cut(s)	290, 477, 500, 1186, 1421, 2219
BmeT110I	CYCGRG	1 cut(s)	1692
BmgT120I	GGNCC	9 cut(s)	290, 477, 500, 1079, 1186, 1421, 1675, 2188, 2219
BmiI	GGNNCC	4 cut(s)	405, 1081, 1422, 2189
BmrFI	CCNGG	2 cut(s)	2099, 2122
BmsI	GCATC	3 cut(s)	1279, 2002, 2269
BmtI	GCTAGC	1 cut(s)	2375
BpiI	GAAGAC	1 cut(s)	1951
Bpu14I	TTCGAA	1 cut(s)	1240
BsaBI	GATNNNNATC	1 cut(s)	950
BsaHI	GRCGYC	1 cut(s)	404
BsaJI	CCNNGG	2 cut(s)	628, 823
BsaWI	WCCGGW	2 cut(s)	390, 967
BsaXI	ACNNNNNCTCC	4 cut(s)	949, 979, 2116, 2146
Bsc4I	CCNNNNNNNGG	1 cut(s)	1301
Bse118I	RCCGGY	1 cut(s)	715
Bse1I	ACTGG	5 cut(s)	244, 901, 1290, 1807, 2293
Bse3DI	GCAATG	3 cut(s)	162, 810, 1271
Bse8I	GATNNNNATC	1 cut(s)	950
BseBI	CCWGG	2 cut(s)	2099, 2122
BseDI	CCNNGG	2 cut(s)	628, 823
BseGI	GGATG	5 cut(s)	502, 1270, 1306, 2041, 2260
BseJI	GATNNNNATC	1 cut(s)	950
BseLI	CCNNNNNNNGG	1 cut(s)	1301
BseMI	GCAATG	3 cut(s)	162, 810, 1271
BseMII	CTCAG	2 cut(s)	1103, 1237
BseNI	ACTGG	5 cut(s)	244, 901, 1290, 1807, 2293
BseXI	GCAGC	6 cut(s)	52, 220, 508, 795, 1060, 1248
BseYI	CCCAGC	1 cut(s)	790
BsgI	GTGCAG	1 cut(s)	638
Bsh1236I	CGCG	1 cut(s)	667
BshFI	GGCC	6 cut(s)	5, 828, 1080, 1676, 2146, 2190
BshNI	GGYRCC	1 cut(s)	403
BsiHKAI	GWGCWC	2 cut(s)	2067, 2349
BsiHKCI	CYCGRG	1 cut(s)	1692
BsiSI	CCGG	3 cut(s)	391, 716, 968
BslFI	GGGAC	2 cut(s)	220, 1746
BslI	CCNNNNNNNGG	1 cut(s)	1301
BsmAI	GTCTC	2 cut(s)	252, 520
BsmFI	GGGAC	2 cut(s)	220, 1746
BsmI	GAATGC	2 cut(s)	578, 2127
BsnI	GGCC	6 cut(s)	5, 828, 1080, 1676, 2146, 2190
BsoBI	CYCGRG	1 cut(s)	1692
Bsp119I	TTCGAA	1 cut(s)	1240
Bsp1286I	GDGCHC	2 cut(s)	2067, 2349
Bsp143I	GATC	9 cut(s)	199, 531, 568, 728, 917, 951, 1102, 1592, 1753
BspACI	CCGC	7 cut(s)	47, 63, 93, 106, 288, 979, 1210
BspANI	GGCC	6 cut(s)	5, 828, 1080, 1676, 2146, 2190
BspCNI	CTCAG	2 cut(s)	1104, 1236
BspFNI	CGCG	1 cut(s)	667
BspLI	GGNNCC	4 cut(s)	405, 1081, 1422, 2189
BspMAI	CTGCAG	2 cut(s)	1078, 1744
BspMI	ACCTGC	1 cut(s)	1469
BspOI	GCTAGC	1 cut(s)	2375
BspPI	GGATC	5 cut(s)	207, 576, 736, 925, 959
BspT104I	TTCGAA	1 cut(s)	1240
BspT107I	GGYRCC	1 cut(s)	403
BspTI	CTTAAG	1 cut(s)	1513
BsrDI	GCAATG	3 cut(s)	162, 810, 1271
BsrFI	RCCGGY	1 cut(s)	715
BsrI	ACTGG	5 cut(s)	244, 901, 1290, 1807, 2293
BssAI	RCCGGY	1 cut(s)	715
BssECI	CCNNGG	2 cut(s)	628, 823
BssMI	GATC	9 cut(s)	199, 531, 568, 728, 917, 951, 1102, 1592, 1753
BssNI	GRCGYC	1 cut(s)	404
BssT1I	CCWWGG	1 cut(s)	628
Bst2UI	CCWGG	2 cut(s)	2099, 2122
Bst4CI	ACNGT	6 cut(s)	263, 1177, 1443, 2077, 2363, 2391
Bst6I	CTCTTC	2 cut(s)	1614, 2235
BstACI	GRCGYC	1 cut(s)	404
BstAFI	CTTAAG	1 cut(s)	1513
BstAPI	GCANNNNNTGC	1 cut(s)	173
BstBI	TTCGAA	1 cut(s)	1240
BstC8I	GCNNGC	5 cut(s)	231, 373, 768, 1078, 2373
BstDEI	CTNAG	7 cut(s)	869, 929, 1112, 1223, 1358, 1471, 1936
BstDSI	CCRYGG	1 cut(s)	823
BstF5I	GGATG	5 cut(s)	502, 1270, 1306, 2041, 2260
BstFNI	CGCG	1 cut(s)	667
BstH2I	RGCGCY	1 cut(s)	407
BstHHI	GCGC	2 cut(s)	406, 667
BstKTI	GATC	9 cut(s)	202, 534, 571, 731, 920, 954, 1105, 1595, 1756
BstMAI	GTCTC	2 cut(s)	252, 520
BstMBI	GATC	9 cut(s)	199, 531, 568, 728, 917, 951, 1102, 1592, 1753
BstMWI	GCNNNNNNNGC	8 cut(s)	74, 173, 314, 584, 693, 911, 1258, 1267
BstNI	CCWGG	2 cut(s)	2099, 2122
BstNSI	RCATGY	2 cut(s)	375, 770
BstSCI	CCNGG	2 cut(s)	2097, 2120
BstSFI	CTRYAG	5 cut(s)	442, 1068, 1074, 1176, 1740
BstUI	CGCG	1 cut(s)	667
BstV1I	GCAGC	6 cut(s)	52, 220, 508, 795, 1060, 1248
BstV2I	GAAGAC	1 cut(s)	1951
BstX2I	RGATCY	2 cut(s)	199, 568
BstXI	CCANNNNNNTGG	2 cut(s)	1297, 1627
BstYI	RGATCY	2 cut(s)	199, 568
BsuI	GTATCC	1 cut(s)	886
BsuRI	GGCC	6 cut(s)	5, 828, 1080, 1676, 2146, 2190
BtgI	CCRYGG	1 cut(s)	823
BtsCI	GGATG	5 cut(s)	502, 1270, 1306, 2041, 2260
BtsI	GCAGTG	1 cut(s)	594
BtsIMutI	CAGTG	3 cut(s)	268, 594, 1285
BveI	ACCTGC	1 cut(s)	1469
Cac8I	GCNNGC	5 cut(s)	231, 373, 768, 1078, 2373
CaiI	CAGNNNCTG	1 cut(s)	2075
CfoI	GCGC	2 cut(s)	406, 667
Cfr10I	RCCGGY	1 cut(s)	715
Cfr13I	GGNCC	9 cut(s)	290, 477, 500, 1079, 1186, 1421, 1675, 2188, 2219
Csp6I	GTAC	7 cut(s)	191, 399, 1213, 1444, 1737, 1800, 2387
CviQI	GTAC	7 cut(s)	191, 399, 1213, 1444, 1737, 1800, 2387
DdeI	CTNAG	7 cut(s)	869, 929, 1112, 1223, 1358, 1471, 1936
DinI	GGCGCC	1 cut(s)	405
DpnI	GATC	9 cut(s)	201, 533, 570, 730, 919, 953, 1104, 1594, 1755
DpnII	GATC	9 cut(s)	199, 531, 568, 728, 917, 951, 1102, 1592, 1753
DraI	TTTAAA	1 cut(s)	2155
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	2 cut(s)	1614, 2235
EarI	CTCTTC	2 cut(s)	1614, 2235
Ecl136II	GAGCTC	1 cut(s)	2347
Eco130I	CCWWGG	1 cut(s)	628
Eco24I	GRGCYC	1 cut(s)	2349
Eco47I	GGWCC	6 cut(s)	290, 477, 500, 1186, 1421, 2219
Eco53kI	GAGCTC	1 cut(s)	2347
Eco57I	CTGAAG	2 cut(s)	1655, 1998
Eco88I	CYCGRG	1 cut(s)	1692
EcoICRI	GAGCTC	1 cut(s)	2347
EcoO109I	RGGNCCY	2 cut(s)	1079, 1421
EcoRII	CCWGG	2 cut(s)	2097, 2120
EcoT14I	CCWWGG	1 cut(s)	628
EcoT22I	ATGCAT	2 cut(s)	373, 580
EcoT38I	GRGCYC	1 cut(s)	2349
EgeI	GGCGCC	1 cut(s)	405
EheI	GGCGCC	1 cut(s)	405
ErhI	CCWWGG	1 cut(s)	628
FalI	AAGNNNNNCTT	2 cut(s)	92, 124
FaqI	GGGAC	2 cut(s)	220, 1746
FauI	CCCGC	1 cut(s)	86
FblI	GTMKAC	1 cut(s)	2332
Fnu4HI	GCNGC	7 cut(s)	47, 66, 234, 522, 809, 1074, 1262
FokI	GGATG	5 cut(s)	509, 1257, 1313, 2048, 2247
FriOI	GRGCYC	1 cut(s)	2349
Fsp4HI	GCNGC	7 cut(s)	47, 66, 234, 522, 809, 1074, 1262
FspBI	CTAG	2 cut(s)	2265, 2372
GlaI	GCGC	2 cut(s)	405, 666
GluI	GCNGC	7 cut(s)	47, 66, 234, 522, 809, 1074, 1262
GsaI	CCCAGC	1 cut(s)	794
HaeII	RGCGCY	1 cut(s)	407
HaeIII	GGCC	6 cut(s)	5, 828, 1080, 1676, 2146, 2190
HapII	CCGG	3 cut(s)	391, 716, 968
HhaI	GCGC	2 cut(s)	406, 667
Hin1I	GRCGYC	1 cut(s)	404
Hin6I	GCGC	2 cut(s)	404, 665
HinP1I	GCGC	2 cut(s)	404, 665
HincII	GTYRAC	1 cut(s)	1404
HindII	GTYRAC	1 cut(s)	1404
HindIII	AAGCTT	1 cut(s)	2302
HinfI	GANTC	7 cut(s)	14, 465, 1364, 1631, 1697, 1745, 2042
HpaI	GTTAAC	1 cut(s)	1404
HpaII	CCGG	3 cut(s)	391, 716, 968
HphI	GGTGA	3 cut(s)	23, 1488, 1733
Hpy166II	GTNNAC	4 cut(s)	592, 1307, 1404, 2333
Hpy188I	TCNGA	8 cut(s)	19, 974, 1113, 1597, 1702, 1714, 1753, 2002
Hpy188III	TCNNGA	6 cut(s)	362, 1100, 1128, 1372, 1694, 1779
Hpy8I	GTNNAC	4 cut(s)	592, 1307, 1404, 2333
Hpy99I	CGWCG	1 cut(s)	74
HpyAV	CCTTC	4 cut(s)	883, 1172, 1535, 2286
HpyCH4III	ACNGT	6 cut(s)	263, 1177, 1443, 2077, 2363, 2391
HpyCH4IV	ACGT	3 cut(s)	72, 1017, 1686
HpyF10VI	GCNNNNNNNGC	8 cut(s)	74, 173, 314, 584, 693, 911, 1258, 1267
HpyF3I	CTNAG	7 cut(s)	869, 929, 1112, 1223, 1358, 1471, 1936
HpySE526I	ACGT	3 cut(s)	72, 1017, 1686
Hsp92I	GRCGYC	1 cut(s)	404
HspAI	GCGC	2 cut(s)	404, 665
KasI	GGCGCC	1 cut(s)	403
KspAI	GTTAAC	1 cut(s)	1404
Kzo9I	GATC	9 cut(s)	199, 531, 568, 728, 917, 951, 1102, 1592, 1753
LmnI	GCTCC	5 cut(s)	82, 1249, 1384, 2124, 2344
Lsp1109I	GCAGC	6 cut(s)	52, 220, 508, 795, 1060, 1248
LweI	GCATC	3 cut(s)	1279, 2002, 2269
MaeI	CTAG	2 cut(s)	2265, 2372
MaeII	ACGT	3 cut(s)	72, 1017, 1686
MaeIII	GTNAC	3 cut(s)	1517, 1687, 2077
MalI	GATC	9 cut(s)	201, 533, 570, 730, 919, 953, 1104, 1594, 1755
MboI	GATC	9 cut(s)	199, 531, 568, 728, 917, 951, 1102, 1592, 1753
MflI	RGATCY	2 cut(s)	199, 568
MhlI	GDGCHC	2 cut(s)	2067, 2349
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
Mly113I	GGCGCC	1 cut(s)	404
MlyI	GAGTC	2 cut(s)	1625, 1706
MmeI	TCCRAC	3 cut(s)	1708, 1854, 2249
MnlI	CCTC	9 cut(s)	471, 768, 975, 1107, 1232, 1411, 2014, 2026, 2232
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	2 cut(s)	373, 580
MroXI	GAANNNNTTC	1 cut(s)	107
MscI	TGGCCA	1 cut(s)	5
MslI	CAYNNNNRTG	4 cut(s)	587, 1025, 1625, 2196
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	3 cut(s)	65, 288, 1073
MspCI	CTTAAG	1 cut(s)	1513
MspI	CCGG	3 cut(s)	391, 716, 968
MspR9I	CCNGG	2 cut(s)	2099, 2122
Mva1269I	GAATGC	2 cut(s)	578, 2127
MvaI	CCWGG	2 cut(s)	2099, 2122
MvnI	CGCG	1 cut(s)	667
MwoI	GCNNNNNNNGC	8 cut(s)	74, 173, 314, 584, 693, 911, 1258, 1267
NarI	GGCGCC	1 cut(s)	404
NdeII	GATC	9 cut(s)	199, 531, 568, 728, 917, 951, 1102, 1592, 1753
NheI	GCTAGC	1 cut(s)	2371
NlaIV	GGNNCC	4 cut(s)	405, 1081, 1422, 2189
NmuCI	GTSAC	1 cut(s)	1517
NsiI	ATGCAT	2 cut(s)	373, 580
NspI	RCATGY	2 cut(s)	375, 770
NspV	TTCGAA	1 cut(s)	1240
OliI	CACNNNNGTG	1 cut(s)	587
PaeI	GCATGC	2 cut(s)	375, 770
PaqCI	CACCTGC	1 cut(s)	1469
PcsI	WCGNNNNNNNCGW	1 cut(s)	1023
PctI	GAATGC	2 cut(s)	578, 2127
PdmI	GAANNNNTTC	1 cut(s)	107
PfeI	GAWTC	5 cut(s)	14, 465, 1364, 1745, 2042
PkrI	GCNGC	7 cut(s)	48, 67, 235, 523, 810, 1075, 1263
PleI	GAGTC	2 cut(s)	1625, 1705
PluTI	GGCGCC	1 cut(s)	407
PpsI	GAGTC	2 cut(s)	1625, 1705
PpuMI	RGGWCCY	1 cut(s)	1421
PshBI	ATTAAT	2 cut(s)	434, 644
PsiI	TTATAA	1 cut(s)	749
Psp124BI	GAGCTC	1 cut(s)	2349
Psp5II	RGGWCCY	1 cut(s)	1421
Psp6I	CCWGG	2 cut(s)	2097, 2120
PspFI	CCCAGC	1 cut(s)	790
PspGI	CCWGG	2 cut(s)	2097, 2120
PspN4I	GGNNCC	4 cut(s)	405, 1081, 1422, 2189
PspPI	GGNCC	9 cut(s)	290, 477, 500, 1079, 1186, 1421, 1675, 2188, 2219
PspPPI	RGGWCCY	1 cut(s)	1421
PstI	CTGCAG	2 cut(s)	1078, 1744
PstNI	CAGNNNCTG	1 cut(s)	2075
PsuI	RGATCY	2 cut(s)	199, 568
PvuII	CAGCTG	1 cut(s)	1073
RsaI	GTAC	7 cut(s)	192, 400, 1214, 1445, 1738, 1801, 2388
RsaNI	GTAC	7 cut(s)	191, 399, 1213, 1444, 1737, 1800, 2387
RseI	CAYNNNNRTG	4 cut(s)	587, 1025, 1625, 2196
SacI	GAGCTC	1 cut(s)	2349
SatI	GCNGC	7 cut(s)	47, 66, 234, 522, 809, 1074, 1262
Sau3AI	GATC	9 cut(s)	199, 531, 568, 728, 917, 951, 1102, 1592, 1753
Sau96I	GGNCC	9 cut(s)	290, 477, 500, 1079, 1186, 1421, 1675, 2188, 2219
ScaI	AGTACT	1 cut(s)	1738
SchI	GAGTC	2 cut(s)	1625, 1706
ScrFI	CCNGG	2 cut(s)	2099, 2122
SduI	GDGCHC	2 cut(s)	2067, 2349
SfaNI	GCATC	3 cut(s)	1279, 2002, 2269
SfcI	CTRYAG	5 cut(s)	442, 1068, 1074, 1176, 1740
SfoI	GGCGCC	1 cut(s)	405
SfuI	TTCGAA	1 cut(s)	1240
SinI	GGWCC	6 cut(s)	290, 477, 500, 1186, 1421, 2219
SmiMI	CAYNNNNRTG	4 cut(s)	587, 1025, 1625, 2196
SmlI	CTYRAG	1 cut(s)	1513
SmoI	CTYRAG	1 cut(s)	1513
SphI	GCATGC	2 cut(s)	375, 770
SsiI	CCGC	7 cut(s)	47, 63, 93, 106, 288, 979, 1210
SspDI	GGCGCC	1 cut(s)	403
SspI	AATATT	3 cut(s)	754, 879, 1567
SspMI	CTAG	2 cut(s)	2265, 2372
SstI	GAGCTC	1 cut(s)	2349
StyD4I	CCNGG	2 cut(s)	2097, 2120
StyI	CCWWGG	1 cut(s)	628
TaaI	ACNGT	6 cut(s)	263, 1177, 1443, 2077, 2363, 2391
TaiI	ACGT	3 cut(s)	75, 1020, 1689
TaqI	TCGA	4 cut(s)	125, 463, 987, 1240
TatI	WGTACW	2 cut(s)	1736, 2386
TauI	GCSGC	1 cut(s)	49
TfiI	GAWTC	5 cut(s)	14, 465, 1364, 1745, 2042
TscAI	CASTG	3 cut(s)	268, 594, 1285
TseFI	GTSAC	1 cut(s)	1517
TseI	GCWGC	6 cut(s)	65, 233, 521, 808, 1073, 1261
Tsp45I	GTSAC	1 cut(s)	1517
TspDTI	ATGAA	6 cut(s)	151, 1449, 1473, 1899, 1951, 2055
TspGWI	ACGGA	2 cut(s)	212, 1777
TspRI	CASTG	3 cut(s)	268, 594, 1285
Vha464I	CTTAAG	1 cut(s)	1513
VpaK11BI	GGWCC	6 cut(s)	290, 477, 500, 1186, 1421, 2219
VspI	ATTAAT	2 cut(s)	434, 644
XapI	RAATTY	7 cut(s)	140, 982, 1242, 1378, 1703, 2047, 2160
XceI	RCATGY	2 cut(s)	375, 770
XmiI	GTMKAC	1 cut(s)	2332
XmnI	GAANNNNTTC	1 cut(s)	107
XspI	CTAG	2 cut(s)	2265, 2372
ZrmI	AGTACT	1 cut(s)	1738
Zsp2I	ATGCAT	2 cut(s)	373, 580

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.