Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0001374

Physical Location & Seq

Genomic Coordinates Forward (+)

14416244 .. 14421565

Gene Structure 5322 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0174800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1791 bp

ATGGCGACGCCTAATCAGGAAGCAATCGACACCTTCATCGGCATCACCGGCGCCGCCGCCGCCGCCGCCGCGCGAAAGCTCGAGGAGCATGGAGGCAATCTCAATGAAGCTGTGAATGCATATTTCAGTGAAGGAGATAGAAACACATCAGTGAATGTGCATGAGACACCTGTTCTTGATCAAGATGATTTCATGGACATAGATGATCCGGATCTAGTTGGATCTCATAGAAATCCTCTACCACTTCTAGCTGCAGCCAGAGATATCAATCCATTTTCTTCTCTTGAGAACCTTGGTAGAAGTGTCTTTGAAAGTAGTACTGATATAACAAACCGTACACCATTTGTTACTCATCCAAGAGAAGTGAGGGAAATCCCCATAGAAGTCAAGGATGGCAGTCATTCATCTGGTCATTCTGACCATGCTTCTAAAATTGATGATGTTATTGGAACAGCGGAGGCATACGGCCCAGGTGTCAGTGGAACGGTTATAGTTGATGATGACGATGATGATGTTGCAGCTGCCCCAACTGTTCGGGCAGGGCAAGGGAGTGGACCAAGAGATAACTCTTCAGGTGATGGATCTCATCACCAGACTTTTGCACCCAGTGCTCCTCGATTTGATGATCCTAGCAATGATATTGAAGAACAAATGATTCGAGCTGCTATTGAGGCTTCAAAACGGGAGGTTGAGGCAAACCACTCAAATCACCAATTTGGTGTACCAAATGAGTTTGATGATATTGAGCCTGAGCAAAGACAGTCTCACCTAGAGGATCCTGAACTTGCACATGTAGTTTCATTGTCACTGAAGACAGCAGAGCAAGAGAAAGCATTCCGCGAGCAGGGGGGAAATGTTAGACCTGCAGAGATGGGTGCTTCTAAGGAAGCTGAGGTGGAGCTGGCTAAAGTAGCAGCACCAAATGGAAGTGAATGTAGCTTGGAGGCAGGAAGCTCATCTATCAGAGATGATACTGAAGATGTGGAGGAGCAGCCTCTTGTCAGGCACAGGTCCAGGCGCATGCCTCCTGGGTCTGTGGAGTCTTCCAAAGAATTTGGACCTAGTGAGACTAGCACACCTTCTAGTCCTGGAGAGCAGGATATGGGTAATCATCCTAGTCATGATGGTGGTGCCTTCCCTTCTGACGAGTGGGGAGGCATGTCTTCACAGGAGCATGACGAAGCAGTGATGCTTGAGGCTGCAATGTTTGGTGGAATCCCTGAAGGGTCTGGATATCGCATTCCCTATGCACCTCATCAATTTATGCGACCAGAGAGTCCGTATCCCCTGCCAGTACCTCGTCCCCCATCACCCTCTCTGACGGCACAGCGAATGATACGGGAACAACAGGATGATGAATATCTTGCATCACTGCAAGCAGACAGAGAAAAGGAACTGAAGGCTATTGAGGAAGCTGAAGCTCGTCGTGAAGCAGAAAGACAAGAAGAGGAAGAATCTCGGAGGAAAGTTGAGGAGGAGCAGGAATTGGAGAGACAATTAGCAGCAAAAGAAGCTACTCTCCCTCAAGAACCAGCATCAGATGATGTGAATGCTGTAACCCTTCTGGTGCGAATGCCGGATGGCAGCCGCCATGGTCGTCGATTTCTTAAGACTGATAAGTTGCAGTCTCTTTTCAACTTCATAGATATTGGCAGAAGAGTGAAACCCGGCTCTTACAGAGTGGTGAGGCCGTTCCCTAGGCGTGCTTTCAGCGATGGAGACAGTGCATTGACACTGAATGAACTTGGCCTGACCAGCAAGCAAGAAGCTTTGTTTTTGGAGTTGATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006725 GO:0008150 GO:0008152 GO:0009056 GO:0009404 GO:0009407 GO:0009636 GO:0009987 GO:0016034 GO:0016054 GO:0016853 GO:0016859 GO:0018958 GO:0019336 GO:0019439 GO:0019748 GO:0019752 GO:0032787 GO:0042221 GO:0043436 GO:0044237 GO:0044248 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046395 GO:0050896 GO:0071704 GO:0072329 GO:0098754 GO:1901360 GO:1901361 GO:1901575 GO:1901615 GO:1901616 GO:1901999 GO:1902000

KEGG Pathways

Metabolic & Signaling

ko00350 ko00643 ko01100 ko01120 map00350 map00643 map01100 map01120

Pfam Domains

Protein Families

GST_C GST_C_2 GST_C_3 GST_N GST_N_3

Protein Analysis

596

Amino Acids

65.21

Weight (kDa)

4.66

Isoelectric Point (pI)

56.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_4	PF14555	6 - 47	7.2e-11	UBA-like domain
UBX	PF00789	516 - 594	1.1e-18	UBX domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001374)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02380 AT2G02390 AT2G02390 AT2G02390 AT2G02390
fragaria_vesca	FvH4_5g27160
malus_domestica	MD08G1250500.v1.1 MD15G1445700.v1.1
prunus_persica	Prupe.1G587700_v2.0.a1 Prupe.1G587700_v2.0.a1
pyrus_communis	pycom08g21730 pycom15g39250
rosa_chinensis	RchiOBHm_Chr7g0218201 RchiOBHm_Chr7g0218231 RchiOBHm_Chr7g0218251
rosa_laevigata	RLG00000002386 RLG00000002388 RLG00000002390
rosa_multiflora	Rmu_sc0004956.1_g000003 Rmu_sc0008593.1_g000004 Rmu_sc0008593.1_g000008 Rmu_sc0011666.1_g000005 Rmu_sc0021950.1_g000001 Rmu_sc0024798.1_g000001
rosa_roxburghii	Rroxscaffold_1G00032070 Rroxscaffold_3G00241200 Rroxscaffold_3G00241210
rosa_rugosa	Rorug07G0174800 Rorug07G0174900 Rorug07G0175000 Rorug07G0175200 Rorug07G0175300 Rorug07G0175400 Rorug07G0175500 Rorug07G0175500 Rorug07G0175600 Rorug07G0175700 Rorug07G0175800
rosa_samantha	Rh7AG304100 Rh7AG304200 Rh7BG308500 Rh7BG308600 Rh7BG308700 Rh7BG308800 Rh7CG322500 Rh7CG322700 Rh7CG334300 Rh7DG304300 Rh7DG316400
rosa_wichuraiana	Rw7G025830 Rw7G026860 Rw7G026940 Rw7G026950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1275
Acc36I	ACCTGC	1 cut(s)	871
AccB1I	GGYRCC	2 cut(s)	50, 1130
AccII	CGCG	3 cut(s)	71, 73, 840
AccIII	TCCGGA	1 cut(s)	208
AciI	CCGC	9 cut(s)	54, 57, 60, 63, 66, 69, 455, 838, 1588
AclWI	GGATC	7 cut(s)	200, 219, 229, 589, 620, 770, 783
AcsI	RAATTY	1 cut(s)	1052
AcuI	CTGAAG	6 cut(s)	555, 830, 996, 1242, 1418, 1437
AcyI	GRCGYC	2 cut(s)	8, 51
AdeI	CACNNNGTG	1 cut(s)	608
AfaI	GTAC	4 cut(s)	319, 337, 723, 1296
AfiI	CCNNNNNNNGG	1 cut(s)	844
AflII	CTTAAG	1 cut(s)	1607
AflIII	ACRYGT	1 cut(s)	790
AgsI	TTSAA	4 cut(s)	311, 644, 678, 1636
AjnI	CCWGG	4 cut(s)	469, 1013, 1027, 1087
AleI	CACNNNNGTG	1 cut(s)	149
Alw21I	GWGCWC	1 cut(s)	613
Alw26I	GTCTC	6 cut(s)	158, 768, 1061, 1486, 1632, 1713
AlwI	GGATC	7 cut(s)	200, 219, 229, 589, 620, 770, 783
Ama87I	CYCGRG	1 cut(s)	80
Aor13HI	TCCGGA	1 cut(s)	208
AoxI	GGCC	3 cut(s)	466, 1688, 1747
ApoI	RAATTY	1 cut(s)	1052
Asp700I	GAANNNNTTC	1 cut(s)	833
AspA2I	CCTAGG	1 cut(s)	1697
AspLEI	GCGC	3 cut(s)	53, 73, 1020
AspS9I	GGNCC	4 cut(s)	467, 554, 1011, 1058
AsuC2I	CCSGG	1 cut(s)	1668
AsuHPI	GGTGA	7 cut(s)	37, 581, 587, 701, 758, 1302, 1696
AvaI	CYCGRG	1 cut(s)	80
AvaII	GGWCC	3 cut(s)	554, 1011, 1058
AvrII	CCTAGG	1 cut(s)	1697
BamHI	GGATCC	1 cut(s)	775
BanI	GGYRCC	2 cut(s)	50, 1130
BbsI	GAAGAC	3 cut(s)	818, 1035, 1155
Bbv12I	GWGCWC	1 cut(s)	613
BbvCI	CCTCAGC	1 cut(s)	891
BccI	CCATC	7 cut(s)	386, 572, 865, 1118, 1315, 1574, 1709
BceAI	ACGGC	3 cut(s)	481, 1338, 1675
BciT130I	CCWGG	4 cut(s)	471, 1015, 1029, 1089
BciVI	GTATCC	1 cut(s)	1293
BclI	TGATCA	1 cut(s)	178
BcnI	CCSGG	1 cut(s)	1668
BcoDI	GTCTC	6 cut(s)	158, 768, 1061, 1486, 1632, 1713
BfaI	CTAG	9 cut(s)	215, 248, 630, 770, 1062, 1071, 1083, 1116, 1698
BfmI	CTRYAG	2 cut(s)	252, 864
BfoI	RGCGCY	1 cut(s)	54
BfrI	CTTAAG	1 cut(s)	1607
BfuAI	ACCTGC	1 cut(s)	871
BfuI	GTATCC	1 cut(s)	1293
BlnI	CCTAGG	1 cut(s)	1697
BmcAI	AGTACT	1 cut(s)	319
Bme1390I	CCNGG	5 cut(s)	471, 1015, 1029, 1089, 1668
Bme18I	GGWCC	3 cut(s)	554, 1011, 1058
BmeT110I	CYCGRG	1 cut(s)	80
BmgT120I	GGNCC	4 cut(s)	467, 554, 1011, 1058
BmiI	GGNNCC	3 cut(s)	52, 777, 1132
BmrFI	CCNGG	5 cut(s)	471, 1015, 1029, 1089, 1668
BmrI	ACTGGG	1 cut(s)	600
BmsI	GCATC	4 cut(s)	51, 1179, 1376, 1544
BmuI	ACTGGG	1 cut(s)	600
BpiI	GAAGAC	3 cut(s)	818, 1035, 1155
BplI	GAGNNNNNCTC	2 cut(s)	84, 116
BpmI	CTGGAG	1 cut(s)	1110
Bpu10I	CCTNAGC	2 cut(s)	750, 891
BpuEI	CTTGAG	3 cut(s)	305, 1214, 1509
BpuMI	CCSGG	1 cut(s)	1668
BsaBI	GATNNNNATC	3 cut(s)	210, 267, 1359
BsaHI	GRCGYC	2 cut(s)	8, 51
BsaJI	CCNNGG	5 cut(s)	292, 469, 1028, 1591, 1697
BsaWI	WCCGGW	1 cut(s)	208
Bsc4I	CCNNNNNNNGG	1 cut(s)	844
Bse118I	RCCGGY	1 cut(s)	47
Bse1I	ACTGG	2 cut(s)	606, 1292
Bse3DI	GCAATG	2 cut(s)	640, 1209
Bse8I	GATNNNNATC	3 cut(s)	210, 267, 1359
BseAI	TCCGGA	1 cut(s)	208
BseBI	CCWGG	4 cut(s)	471, 1015, 1029, 1089
BseDI	CCNNGG	5 cut(s)	292, 469, 1028, 1591, 1697
BseGI	GGATG	5 cut(s)	352, 397, 1111, 1357, 1585
BseJI	GATNNNNATC	3 cut(s)	210, 267, 1359
BseLI	CCNNNNNNNGG	1 cut(s)	844
BseMI	GCAATG	2 cut(s)	640, 1209
BseMII	CTCAG	2 cut(s)	741, 882
BseNI	ACTGG	2 cut(s)	606, 1292
BseRI	GAGGAG	5 cut(s)	98, 603, 1001, 1487, 1490
Bsh1236I	CGCG	3 cut(s)	71, 73, 840
BshFI	GGCC	3 cut(s)	468, 1690, 1749
BshNI	GGYRCC	2 cut(s)	50, 1130
BsiHKAI	GWGCWC	1 cut(s)	613
BsiHKCI	CYCGRG	1 cut(s)	80
BsiSI	CCGG	4 cut(s)	48, 209, 1577, 1668
BslFI	GGGAC	1 cut(s)	1287
BslI	CCNNNNNNNGG	1 cut(s)	844
BsmAI	GTCTC	6 cut(s)	158, 768, 1061, 1486, 1632, 1713
BsmFI	GGGAC	1 cut(s)	1287
BsmI	GAATGC	5 cut(s)	121, 833, 1239, 1555, 1578
BsnI	GGCC	3 cut(s)	468, 1690, 1749
BsoBI	CYCGRG	1 cut(s)	80
Bsp1286I	GDGCHC	1 cut(s)	613
Bsp13I	TCCGGA	1 cut(s)	208
Bsp143I	GATC	7 cut(s)	178, 205, 211, 221, 581, 625, 775
Bsp19I	CCATGG	1 cut(s)	1591
BspACI	CCGC	9 cut(s)	54, 57, 60, 63, 66, 69, 455, 838, 1588
BspANI	GGCC	3 cut(s)	468, 1690, 1749
BspCNI	CTCAG	2 cut(s)	742, 883
BspEI	TCCGGA	1 cut(s)	208
BspFNI	CGCG	3 cut(s)	71, 73, 840
BspHI	TCATGA	1 cut(s)	1120
BspLI	GGNNCC	3 cut(s)	52, 777, 1132
BspMAI	CTGCAG	2 cut(s)	256, 868
BspMI	ACCTGC	1 cut(s)	871
BspPI	GGATC	7 cut(s)	200, 219, 229, 589, 620, 770, 783
BspT107I	GGYRCC	2 cut(s)	50, 1130
BspTI	CTTAAG	1 cut(s)	1607
BsrDI	GCAATG	2 cut(s)	640, 1209
BsrFI	RCCGGY	1 cut(s)	47
BsrI	ACTGG	2 cut(s)	606, 1292
BssAI	RCCGGY	1 cut(s)	47
BssECI	CCNNGG	5 cut(s)	292, 469, 1028, 1591, 1697
BssMI	GATC	7 cut(s)	178, 205, 211, 221, 581, 625, 775
BssNI	GRCGYC	2 cut(s)	8, 51
BssT1I	CCWWGG	3 cut(s)	292, 1591, 1697
Bst2UI	CCWGG	4 cut(s)	471, 1015, 1029, 1089
Bst4CI	ACNGT	5 cut(s)	335, 487, 532, 762, 1724
Bst6I	CTCTTC	3 cut(s)	574, 1440, 1651
BstACI	GRCGYC	2 cut(s)	8, 51
BstAFI	CTTAAG	1 cut(s)	1607
BstAPI	GCANNNNNTGC	1 cut(s)	608
BstC8I	GCNNGC	6 cut(s)	842, 903, 1022, 1377, 1704, 1760
BstDEI	CTNAG	3 cut(s)	750, 882, 891
BstDSI	CCRYGG	1 cut(s)	1591
BstF5I	GGATG	5 cut(s)	352, 397, 1111, 1357, 1585
BstFNI	CGCG	3 cut(s)	71, 73, 840
BstH2I	RGCGCY	1 cut(s)	54
BstHHI	GCGC	3 cut(s)	53, 73, 1020
BstKTI	GATC	7 cut(s)	181, 208, 214, 224, 584, 628, 778
BstMAI	GTCTC	6 cut(s)	158, 768, 1061, 1486, 1632, 1713
BstMBI	GATC	7 cut(s)	178, 205, 211, 221, 581, 625, 775
BstNI	CCWGG	4 cut(s)	471, 1015, 1029, 1089
BstNSI	RCATGY	3 cut(s)	794, 1024, 1162
BstSCI	CCNGG	5 cut(s)	469, 1013, 1027, 1087, 1666
BstSFI	CTRYAG	2 cut(s)	252, 864
BstUI	CGCG	3 cut(s)	71, 73, 840
BstV2I	GAAGAC	3 cut(s)	818, 1035, 1155
BstX2I	RGATCY	4 cut(s)	211, 221, 581, 775
BstYI	RGATCY	4 cut(s)	211, 221, 581, 775
BsuI	GTATCC	1 cut(s)	1293
BsuRI	GGCC	3 cut(s)	468, 1690, 1749
BtgI	CCRYGG	1 cut(s)	1591
BtgZI	GCGATG	1 cut(s)	1728
BtsCI	GGATG	5 cut(s)	352, 397, 1111, 1357, 1585
BtsI	GCAGTG	2 cut(s)	1191, 1370
BtsIMutI	CAGTG	9 cut(s)	133, 156, 484, 613, 806, 1191, 1370, 1729, 1733
BveI	ACCTGC	1 cut(s)	871
Cac8I	GCNNGC	6 cut(s)	842, 903, 1022, 1377, 1704, 1760
CciI	TCATGA	1 cut(s)	1120
CfoI	GCGC	3 cut(s)	53, 73, 1020
Cfr10I	RCCGGY	1 cut(s)	47
Cfr13I	GGNCC	4 cut(s)	467, 554, 1011, 1058
CseI	GACGC	1 cut(s)	16
Csp6I	GTAC	4 cut(s)	318, 336, 722, 1295
CviQI	GTAC	4 cut(s)	318, 336, 722, 1295
DdeI	CTNAG	3 cut(s)	750, 882, 891
DinI	GGCGCC	1 cut(s)	52
DpnI	GATC	7 cut(s)	180, 207, 213, 223, 583, 627, 777
DpnII	GATC	7 cut(s)	178, 205, 211, 221, 581, 625, 775
DraIII	CACNNNGTG	1 cut(s)	608
DrdI	GACNNNNNNGTC	1 cut(s)	1275
DseDI	GACNNNNNNGTC	1 cut(s)	1275
Eam1104I	CTCTTC	3 cut(s)	574, 1440, 1651
EarI	CTCTTC	3 cut(s)	574, 1440, 1651
Eco130I	CCWWGG	3 cut(s)	292, 1591, 1697
Eco32I	GATATC	2 cut(s)	265, 1235
Eco47I	GGWCC	3 cut(s)	554, 1011, 1058
Eco57I	CTGAAG	6 cut(s)	555, 830, 996, 1242, 1418, 1437
Eco88I	CYCGRG	1 cut(s)	80
EcoRII	CCWGG	4 cut(s)	469, 1013, 1027, 1087
EcoRV	GATATC	2 cut(s)	265, 1235
EcoT14I	CCWWGG	3 cut(s)	292, 1591, 1697
EcoT22I	ATGCAT	1 cut(s)	121
EgeI	GGCGCC	1 cut(s)	52
EheI	GGCGCC	1 cut(s)	52
ErhI	CCWWGG	3 cut(s)	292, 1591, 1697
FaqI	GGGAC	1 cut(s)	1287
FbaI	TGATCA	1 cut(s)	178
FokI	GGATG	5 cut(s)	339, 404, 1098, 1364, 1592
FspBI	CTAG	9 cut(s)	215, 248, 630, 770, 1062, 1071, 1083, 1116, 1698
GlaI	GCGC	3 cut(s)	52, 72, 1019
GsuI	CTGGAG	1 cut(s)	1110
HaeII	RGCGCY	1 cut(s)	54
HaeIII	GGCC	3 cut(s)	468, 1690, 1749
HapII	CCGG	4 cut(s)	48, 209, 1577, 1668
HgaI	GACGC	1 cut(s)	16
HhaI	GCGC	3 cut(s)	53, 73, 1020
Hin1I	GRCGYC	2 cut(s)	8, 51
Hin6I	GCGC	3 cut(s)	51, 71, 1018
HinP1I	GCGC	3 cut(s)	51, 71, 1018
HindIII	AAGCTT	1 cut(s)	1767
HinfI	GANTC	5 cut(s)	655, 1040, 1215, 1276, 1454
HpaII	CCGG	4 cut(s)	48, 209, 1577, 1668
HphI	GGTGA	7 cut(s)	37, 581, 587, 701, 758, 1302, 1696
Hpy166II	GTNNAC	3 cut(s)	338, 554, 722
Hpy188I	TCNGA	6 cut(s)	418, 965, 1144, 1320, 1461, 1540
Hpy8I	GTNNAC	3 cut(s)	338, 554, 722
Hpy99I	CGWCG	3 cut(s)	10, 1428, 1602
HpyAV	CCTTC	8 cut(s)	43, 125, 1089, 1144, 1149, 1217, 1393, 1571
HpyCH4III	ACNGT	5 cut(s)	335, 487, 532, 762, 1724
HpyF3I	CTNAG	3 cut(s)	750, 882, 891
Hsp92I	GRCGYC	2 cut(s)	8, 51
HspAI	GCGC	3 cut(s)	51, 71, 1018
KasI	GGCGCC	1 cut(s)	50
Kpn2I	TCCGGA	1 cut(s)	208
Ksp22I	TGATCA	1 cut(s)	178
Kzo9I	GATC	7 cut(s)	178, 205, 211, 221, 581, 625, 775
LmnI	GCTCC	6 cut(s)	85, 616, 898, 988, 1171, 1477
LweI	GCATC	4 cut(s)	51, 1179, 1376, 1544
MaeI	CTAG	9 cut(s)	215, 248, 630, 770, 1062, 1071, 1083, 1116, 1698
MaeIII	GTNAC	3 cut(s)	346, 804, 1555
MalI	GATC	7 cut(s)	180, 207, 213, 223, 583, 627, 777
MboI	GATC	7 cut(s)	178, 205, 211, 221, 581, 625, 775
MflI	RGATCY	4 cut(s)	211, 221, 581, 775
MhlI	GDGCHC	1 cut(s)	613
MluCI	AATT	6 cut(s)	432, 713, 1052, 1259, 1484, 1496
Mly113I	GGCGCC	1 cut(s)	51
MlyI	GAGTC	2 cut(s)	1049, 1285
MmeI	TCCRAC	1 cut(s)	199
Mph1103I	ATGCAT	1 cut(s)	121
MroI	TCCGGA	1 cut(s)	208
MroXI	GAANNNNTTC	1 cut(s)	833
MseI	TTAA	1 cut(s)	1608
MslI	CAYNNNNRTG	2 cut(s)	149, 1125
MspA1I	CMGCKG	2 cut(s)	455, 521
MspCI	CTTAAG	1 cut(s)	1607
MspI	CCGG	4 cut(s)	48, 209, 1577, 1668
MspR9I	CCNGG	5 cut(s)	471, 1015, 1029, 1089, 1668
Mva1269I	GAATGC	5 cut(s)	121, 833, 1239, 1555, 1578
MvaI	CCWGG	4 cut(s)	471, 1015, 1029, 1089
MvnI	CGCG	3 cut(s)	71, 73, 840
NarI	GGCGCC	1 cut(s)	51
NciI	CCSGG	1 cut(s)	1668
NcoI	CCATGG	1 cut(s)	1591
NdeII	GATC	7 cut(s)	178, 205, 211, 221, 581, 625, 775
NlaIV	GGNNCC	3 cut(s)	52, 777, 1132
NmuCI	GTSAC	1 cut(s)	804
NsiI	ATGCAT	1 cut(s)	121
NspI	RCATGY	3 cut(s)	794, 1024, 1162
OliI	CACNNNNGTG	1 cut(s)	149
PaeI	GCATGC	1 cut(s)	1024
PaeR7I	CTCGAG	1 cut(s)	80
PagI	TCATGA	1 cut(s)	1120
PciI	ACATGT	1 cut(s)	790
PctI	GAATGC	5 cut(s)	121, 833, 1239, 1555, 1578
PdmI	GAANNNNTTC	1 cut(s)	833
PfeI	GAWTC	3 cut(s)	655, 1215, 1454
PfoI	TCCNGGA	1 cut(s)	1087
PleI	GAGTC	2 cut(s)	1048, 1284
PluTI	GGCGCC	1 cut(s)	54
PpsI	GAGTC	2 cut(s)	1048, 1284
PscI	ACATGT	1 cut(s)	790
Psp6I	CCWGG	4 cut(s)	469, 1013, 1027, 1087
PspGI	CCWGG	4 cut(s)	469, 1013, 1027, 1087
PspN4I	GGNNCC	3 cut(s)	52, 777, 1132
PspPI	GGNCC	4 cut(s)	467, 554, 1011, 1058
PspXI	VCTCGAGB	1 cut(s)	80
PstI	CTGCAG	2 cut(s)	256, 868
PsuI	RGATCY	4 cut(s)	211, 221, 581, 775
PvuII	CAGCTG	1 cut(s)	521
RsaI	GTAC	4 cut(s)	319, 337, 723, 1296
RsaNI	GTAC	4 cut(s)	318, 336, 722, 1295
RseI	CAYNNNNRTG	2 cut(s)	149, 1125
SaqAI	TTAA	1 cut(s)	1608
Sau3AI	GATC	7 cut(s)	178, 205, 211, 221, 581, 625, 775
Sau96I	GGNCC	4 cut(s)	467, 554, 1011, 1058
ScaI	AGTACT	1 cut(s)	319
SchI	GAGTC	2 cut(s)	1049, 1285
ScrFI	CCNGG	5 cut(s)	471, 1015, 1029, 1089, 1668
SduI	GDGCHC	1 cut(s)	613
SfaNI	GCATC	4 cut(s)	51, 1179, 1376, 1544
SfcI	CTRYAG	2 cut(s)	252, 864
SfoI	GGCGCC	1 cut(s)	52
Sfr274I	CTCGAG	1 cut(s)	80
SgrAI	CRCCGGYG	1 cut(s)	47
SinI	GGWCC	3 cut(s)	554, 1011, 1058
SlaI	CTCGAG	1 cut(s)	80
SmiMI	CAYNNNNRTG	2 cut(s)	149, 1125
SmlI	CTYRAG	5 cut(s)	80, 284, 1193, 1524, 1607
SmoI	CTYRAG	5 cut(s)	80, 284, 1193, 1524, 1607
SphI	GCATGC	1 cut(s)	1024
Sse9I	AATT	6 cut(s)	432, 713, 1052, 1259, 1484, 1496
SsiI	CCGC	9 cut(s)	54, 57, 60, 63, 66, 69, 455, 838, 1588
SspDI	GGCGCC	1 cut(s)	50
SspMI	CTAG	9 cut(s)	215, 248, 630, 770, 1062, 1071, 1083, 1116, 1698
StyD4I	CCNGG	5 cut(s)	469, 1013, 1027, 1087, 1666
StyI	CCWWGG	3 cut(s)	292, 1591, 1697
TaaI	ACNGT	5 cut(s)	335, 487, 532, 762, 1724
TaqI	TCGA	5 cut(s)	27, 81, 616, 658, 1600
TasI	AATT	6 cut(s)	432, 713, 1052, 1259, 1484, 1496
TatI	WGTACW	1 cut(s)	317
TauI	GCSGC	7 cut(s)	56, 59, 62, 65, 68, 71, 1590
TfiI	GAWTC	3 cut(s)	655, 1215, 1454
Tru1I	TTAA	1 cut(s)	1608
Tru9I	TTAA	1 cut(s)	1608
TscAI	CASTG	9 cut(s)	133, 156, 484, 613, 813, 1191, 1377, 1729, 1740
TseFI	GTSAC	1 cut(s)	804
Tsp45I	GTSAC	1 cut(s)	804
TspDTI	ATGAA	8 cut(s)	25, 120, 181, 393, 789, 1371, 1630, 1755
TspGWI	ACGGA	1 cut(s)	1269
TspRI	CASTG	9 cut(s)	133, 156, 484, 613, 813, 1191, 1377, 1729, 1740
Vha464I	CTTAAG	1 cut(s)	1607
VpaK11BI	GGWCC	3 cut(s)	554, 1011, 1058
XapI	RAATTY	1 cut(s)	1052
XceI	RCATGY	3 cut(s)	794, 1024, 1162
XhoI	CTCGAG	1 cut(s)	80
XmaJI	CCTAGG	1 cut(s)	1697
XmnI	GAANNNNTTC	1 cut(s)	833
XspI	CTAG	9 cut(s)	215, 248, 630, 770, 1062, 1071, 1083, 1116, 1698
ZrmI	AGTACT	1 cut(s)	319
Zsp2I	ATGCAT	1 cut(s)	121

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.