Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0001374

Physical Location & Seq

Genomic Coordinates Reverse (-)

14507459 .. 14509885

Gene Structure 2427 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0175700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1554 bp

ATGGCTGGGGGAGGTATAGCTCCATCTGGTGGAAAAAATTACCCCGGTAAATTCACAAAGAGGGTTTTCATAACATGTCTTGTCGCAGCGTTTGGAGGTTTAATTTTCGGTTATGATCTTGGAGTTTCAGGCGGAGTAACGTCCATGGACGTATTTTTGAAGGAGTTCTTTCCGAAGGTCTACTTGAAGCAGTCTTCCGCCTCTGTTTCTACGAATCAGTACTGTAAATTCGACAGTGAAACATTGACGCTCTTTACGTCGTCGCTATATTTGGCCGCTCTGGTTTCATGCCTCTGTGCCTCCACTATAACTAGAGCCTTAGGTAGGAGGGTCACAATGCTTGCCGGTGGACTTCTTTTCCTATTCGGTGCACTTCTCAATGCCTTCGCTCACTCCGTCGGGATGCTTATTGCTGGTCGCCTGTTCCTTGGTTTCGGCATTGGATTTGCCAATCAGTCTGTGCCGATCTATCTATCTGAGACAGCACCATACAGATTCCGCGGTGCACTCAACATGATGTTCCAGTTGGCAATTACAATTGGAATTCTTGTTGCTGGTTTGGCCAACTATTTGTTCGACTTGAAGTATAAAAACCATGGAAATCTAGCCTGGCGTTTGAGTTTGGGCGGCGCTGCAGTCCCTGCTGTGTTTATCATATTGGGATCATTCTTCCTCCCTGACACACCAAACTCTTTGATTGAGCGTGGCAAGCATGAGGAAGCAAAAGCCCAACTCCTCAAGCTCCGTGGTATTGACAACGTCGACGAGGAGTTCAACGATTTGGTGGAGGCTAGTGAGGCTGCTAAGCTGGTCAAACATCCATGGTCGACACTATTGACAAGGAAATACAGGCCCCAGCTTGTATTCGCCATCTGCATTCCTGCTTTCCAGCAACTCACTGGCATGAATGTGATCACTTTCTATGCTCCTGTCTTGTTCAAAACTGTAGGATTCGGAAGCAGTGCATCTCTCGCTTCTGCTCTGATCACTAATGGGGTTAATTTTTTGGCAACTTTTGTTTCAATTGGTCTTGTTGACAAGTTTGGGAGAAGGATCCTTTTCTTGGAGGGTGGTGTGCAGATGTTCGTAACTCAGGTCGTAGTTGGAGGTGCAATGGCTTGGAAATTTGGTACTAGTGGCAACCCTGGTGAACTATCCAAGGGTTTTGCTGCAACTCTGGTGACCTTAATCTGCATCTATGTTGCCGGATTTGCTTGGTCCTGGGGACCTCTAGGATGGTTGGTACCAAGTGAAATTTTCCCGCTGGAAGTTAGGTCAGCTGCTCAGGCCATCAATGTCTCTGTCAACATGATCTTCACCTTTGCCATAGCCCAAGTGTTCACTGCGATGCTCTGCCACATGAAGTTTGGATTGTTCTTCTTCTTCTCTTTCTTCTTGTTCGTGATGAGTTGCTTCATCTTCAAGTATCTGCCGGAGACCAAGGGGGTTCCCATCGAAGAGATGGGGAGGGTGTGGGAGCAGCACCCTTTTTGGCGCAAGTATGTGGTTCAAGACAAAGGCATAGCGATGGGCAAGGCGGCACAGAATGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006725 GO:0008150 GO:0008152 GO:0009056 GO:0009404 GO:0009407 GO:0009636 GO:0009987 GO:0016034 GO:0016054 GO:0016853 GO:0016859 GO:0018958 GO:0019336 GO:0019439 GO:0019748 GO:0019752 GO:0032787 GO:0042221 GO:0043436 GO:0044237 GO:0044248 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046395 GO:0050896 GO:0071704 GO:0072329 GO:0098754 GO:1901360 GO:1901361 GO:1901575 GO:1901615 GO:1901616 GO:1901999 GO:1902000

KEGG Pathways

Metabolic & Signaling

ko00350 ko00643 ko01100 ko01120 map00350 map00643 map01100 map01120

Pfam Domains

Protein Families

GST_C GST_C_2 GST_C_3 GST_N GST_N_3

Protein Analysis

517

Amino Acids

56.35

Weight (kDa)

9.37

Isoelectric Point (pI)

30.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	26 - 492	3.3e-123	Sugar (and other) transporter
MFS_1	PF07690	77 - 440	5e-20	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001374)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02380 AT2G02390 AT2G02390 AT2G02390 AT2G02390
fragaria_vesca	FvH4_5g27160
malus_domestica	MD08G1250500.v1.1 MD15G1445700.v1.1
prunus_persica	Prupe.1G587700_v2.0.a1 Prupe.1G587700_v2.0.a1
pyrus_communis	pycom08g21730 pycom15g39250
rosa_chinensis	RchiOBHm_Chr7g0218201 RchiOBHm_Chr7g0218231 RchiOBHm_Chr7g0218251
rosa_laevigata	RLG00000002386 RLG00000002388 RLG00000002390
rosa_multiflora	Rmu_sc0004956.1_g000003 Rmu_sc0008593.1_g000004 Rmu_sc0008593.1_g000008 Rmu_sc0011666.1_g000005 Rmu_sc0021950.1_g000001 Rmu_sc0024798.1_g000001
rosa_roxburghii	Rroxscaffold_1G00032070 Rroxscaffold_3G00241200 Rroxscaffold_3G00241210
rosa_rugosa	Rorug07G0174800 Rorug07G0174900 Rorug07G0175000 Rorug07G0175200 Rorug07G0175300 Rorug07G0175400 Rorug07G0175500 Rorug07G0175500 Rorug07G0175600 Rorug07G0175700 Rorug07G0175800
rosa_samantha	Rh7AG304100 Rh7AG304200 Rh7BG308500 Rh7BG308600 Rh7BG308700 Rh7BG308800 Rh7CG322500 Rh7CG322700 Rh7CG334300 Rh7DG304300 Rh7DG316400
rosa_wichuraiana	Rw7G025830 Rw7G026860 Rw7G026940 Rw7G026950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1243
AccB1I	GGYRCC	1 cut(s)	1243
AccB7I	CCANNNNNTGG	1 cut(s)	29
AccBSI	CCGCTC	1 cut(s)	278
AccI	GTMKAC	3 cut(s)	180, 762, 827
AccII	CGCG	1 cut(s)	501
AciI	CCGC	8 cut(s)	132, 198, 276, 499, 501, 627, 1262, 1538
AclWI	GGATC	3 cut(s)	670, 1048, 1061
AcoI	YGGCCR	2 cut(s)	273, 561
AcsI	RAATTY	5 cut(s)	50, 227, 543, 1124, 1254
AfaI	GTAC	3 cut(s)	221, 1132, 1245
AfiI	CCNNNNNNNGG	3 cut(s)	29, 324, 1063
AflIII	ACRYGT	1 cut(s)	74
AgsI	TTSAA	8 cut(s)	160, 187, 583, 775, 940, 1023, 1423, 1511
AhlI	ACTAGT	1 cut(s)	1133
AjnI	CCWGG	3 cut(s)	608, 1144, 1220
AjuI	GAANNNNNNNTTGG	2 cut(s)	557, 589
AluBI	AGCT	5 cut(s)	20, 742, 808, 859, 1280
AluI	AGCT	5 cut(s)	20, 742, 808, 859, 1280
Alw21I	GWGCWC	2 cut(s)	373, 508
Alw26I	GTCTC	3 cut(s)	473, 1303, 1430
Alw44I	GTGCAC	2 cut(s)	369, 504
AlwI	GGATC	3 cut(s)	670, 1048, 1061
AlwNI	CAGNNNCTG	1 cut(s)	641
AoxI	GGCC	4 cut(s)	273, 561, 851, 1287
ApaLI	GTGCAC	2 cut(s)	369, 504
ApeKI	GCWGC	6 cut(s)	86, 632, 800, 1169, 1280, 1480
ApoI	RAATTY	5 cut(s)	50, 227, 543, 1124, 1254
Asp700I	GAANNNNTTC	1 cut(s)	164
Asp718I	GGTACC	1 cut(s)	1243
AspLEI	GCGC	2 cut(s)	632, 1497
AspS9I	GGNCC	3 cut(s)	852, 1218, 1226
AsuC2I	CCSGG	1 cut(s)	45
AsuHPI	GGTGA	3 cut(s)	1160, 1192, 1309
AvaII	GGWCC	2 cut(s)	1218, 1226
AxyI	CCTNAGG	1 cut(s)	319
BaeGI	GKGCMC	2 cut(s)	373, 508
BalI	TGGCCA	1 cut(s)	563
BamHI	GGATCC	1 cut(s)	1053
BanI	GGYRCC	1 cut(s)	1243
BbsI	GAAGAC	1 cut(s)	186
Bbv12I	GWGCWC	2 cut(s)	373, 508
BbvI	GCAGC	6 cut(s)	98, 619, 787, 1156, 1267, 1492
BccI	CCATC	7 cut(s)	31, 878, 1230, 1298, 1456, 1460, 1522
BciT130I	CCWGG	3 cut(s)	610, 1146, 1222
BclI	TGATCA	2 cut(s)	912, 984
BcnI	CCSGG	1 cut(s)	45
BcoDI	GTCTC	3 cut(s)	473, 1303, 1430
BcuI	ACTAGT	1 cut(s)	1133
BfaI	CTAG	5 cut(s)	312, 605, 792, 1134, 1232
BfmI	CTRYAG	2 cut(s)	633, 945
BfoI	RGCGCY	1 cut(s)	633
BisI	GCNGC	9 cut(s)	87, 276, 628, 633, 801, 1170, 1281, 1481, 1539
BlpI	GCTNAGC	1 cut(s)	804
BlsI	GCNGC	9 cut(s)	88, 277, 629, 634, 802, 1171, 1282, 1482, 1540
BmcAI	AGTACT	1 cut(s)	221
Bme1390I	CCNGG	4 cut(s)	45, 610, 1146, 1222
Bme18I	GGWCC	2 cut(s)	1218, 1226
BmgT120I	GGNCC	3 cut(s)	852, 1218, 1226
BmiI	GGNNCC	5 cut(s)	854, 1055, 1227, 1245, 1449
BmrFI	CCNGG	4 cut(s)	45, 610, 1146, 1222
BmsI	GCATC	4 cut(s)	393, 974, 1203, 1338
BpiI	GAAGAC	1 cut(s)	186
Bpu10I	CCTNAGC	1 cut(s)	1284
Bpu1102I	GCTNAGC	1 cut(s)	804
BpuEI	CTTGAG	1 cut(s)	722
BpuMI	CCSGG	1 cut(s)	45
BsaI	GGTCTC	1 cut(s)	1430
Bsc4I	CCNNNNNNNGG	3 cut(s)	29, 324, 1063
Bse118I	RCCGGY	1 cut(s)	344
Bse1I	ACTGG	2 cut(s)	523, 904
Bse21I	CCTNAGG	1 cut(s)	319
Bse3DI	GCAATG	1 cut(s)	1119
BseBI	CCWGG	3 cut(s)	610, 1146, 1222
BseGI	GGATG	3 cut(s)	408, 817, 1241
BseLI	CCNNNNNNNGG	3 cut(s)	29, 324, 1063
BseMI	GCAATG	1 cut(s)	1119
BseMII	CTCAG	3 cut(s)	468, 1106, 1298
BseNI	ACTGG	2 cut(s)	523, 904
BseRI	GAGGAG	2 cut(s)	725, 782
BseSI	GKGCMC	2 cut(s)	373, 508
BseXI	GCAGC	6 cut(s)	98, 619, 787, 1156, 1267, 1492
BseYI	CCCAGC	2 cut(s)	5, 855
BsgI	GTGCAG	1 cut(s)	1097
Bsh1236I	CGCG	1 cut(s)	501
BshFI	GGCC	4 cut(s)	275, 563, 853, 1289
BshNI	GGYRCC	1 cut(s)	1243
BsiHKAI	GWGCWC	2 cut(s)	373, 508
BsiSI	CCGG	4 cut(s)	45, 345, 1206, 1433
BslFI	GGGAC	2 cut(s)	623, 1239
BslI	CCNNNNNNNGG	3 cut(s)	29, 324, 1063
BsmAI	GTCTC	3 cut(s)	473, 1303, 1430
BsmFI	GGGAC	2 cut(s)	623, 1239
BsmI	GAATGC	1 cut(s)	876
BsnI	GGCC	4 cut(s)	275, 563, 853, 1289
Bso31I	GGTCTC	1 cut(s)	1430
Bsp1286I	GDGCHC	2 cut(s)	373, 508
Bsp143I	GATC	7 cut(s)	115, 465, 662, 912, 984, 1053, 1311
Bsp1720I	GCTNAGC	1 cut(s)	804
Bsp19I	CCATGG	3 cut(s)	144, 595, 821
BspACI	CCGC	8 cut(s)	132, 198, 276, 499, 501, 627, 1262, 1538
BspANI	GGCC	4 cut(s)	275, 563, 853, 1289
BspCNI	CTCAG	3 cut(s)	469, 1105, 1297
BspFNI	CGCG	1 cut(s)	501
BspLI	GGNNCC	5 cut(s)	854, 1055, 1227, 1245, 1449
BspMAI	CTGCAG	1 cut(s)	637
BspPI	GGATC	3 cut(s)	670, 1048, 1061
BspT107I	GGYRCC	1 cut(s)	1243
BspTNI	GGTCTC	1 cut(s)	1430
BsrBI	CCGCTC	1 cut(s)	278
BsrDI	GCAATG	1 cut(s)	1119
BsrFI	RCCGGY	1 cut(s)	344
BsrI	ACTGG	2 cut(s)	523, 904
BssAI	RCCGGY	1 cut(s)	344
BssMI	GATC	7 cut(s)	115, 465, 662, 912, 984, 1053, 1311
BssT1I	CCWWGG	6 cut(s)	144, 427, 595, 821, 1158, 1440
Bst2UI	CCWGG	3 cut(s)	610, 1146, 1222
Bst4CI	ACNGT	3 cut(s)	224, 236, 946
Bst6I	CTCTTC	1 cut(s)	1452
BstAPI	GCANNNNNTGC	1 cut(s)	641
BstC8I	GCNNGC	2 cut(s)	342, 710
BstDEI	CTNAG	5 cut(s)	319, 477, 804, 1092, 1284
BstDSI	CCRYGG	5 cut(s)	144, 499, 595, 745, 821
BstEII	GGTNACC	1 cut(s)	1180
BstENI	CCTNNNNNAGG	1 cut(s)	322
BstF5I	GGATG	3 cut(s)	408, 817, 1241
BstFNI	CGCG	1 cut(s)	501
BstH2I	RGCGCY	1 cut(s)	633
BstHHI	GCGC	2 cut(s)	632, 1497
BstKTI	GATC	7 cut(s)	118, 468, 665, 915, 987, 1056, 1314
BstMAI	GTCTC	3 cut(s)	473, 1303, 1430
BstMBI	GATC	7 cut(s)	115, 465, 662, 912, 984, 1053, 1311
BstMWI	GCNNNNNNNGC	7 cut(s)	560, 641, 709, 797, 971, 1211, 1286
BstNI	CCWGG	3 cut(s)	610, 1146, 1222
BstNSI	RCATGY	1 cut(s)	78
BstPI	GGTNACC	1 cut(s)	1180
BstSCI	CCNGG	4 cut(s)	43, 608, 1144, 1220
BstSFI	CTRYAG	2 cut(s)	633, 945
BstSLI	GKGCMC	2 cut(s)	373, 508
BstUI	CGCG	1 cut(s)	501
BstV1I	GCAGC	6 cut(s)	98, 619, 787, 1156, 1267, 1492
BstV2I	GAAGAC	1 cut(s)	186
BstX2I	RGATCY	1 cut(s)	1053
BstYI	RGATCY	1 cut(s)	1053
Bsu36I	CCTNAGG	1 cut(s)	319
BsuRI	GGCC	4 cut(s)	275, 563, 853, 1289
BtgI	CCRYGG	5 cut(s)	144, 499, 595, 745, 821
BtgZI	GCGATG	2 cut(s)	1361, 1541
BtsCI	GGATG	3 cut(s)	408, 817, 1241
BtsI	GCAGTG	2 cut(s)	967, 1341
BtsIMutI	CAGTG	4 cut(s)	241, 897, 967, 1341
Cac8I	GCNNGC	2 cut(s)	342, 710
CaiI	CAGNNNCTG	1 cut(s)	641
CfoI	GCGC	2 cut(s)	632, 1497
Cfr10I	RCCGGY	1 cut(s)	344
Cfr13I	GGNCC	3 cut(s)	852, 1218, 1226
Cfr42I	CCGCGG	1 cut(s)	502
CseI	GACGC	1 cut(s)	256
Csp6I	GTAC	3 cut(s)	220, 1131, 1244
CspCI	CAANNNNNGTGG	2 cut(s)	727, 762
CviQI	GTAC	3 cut(s)	220, 1131, 1244
DdeI	CTNAG	5 cut(s)	319, 477, 804, 1092, 1284
DpnI	GATC	7 cut(s)	117, 467, 664, 914, 986, 1055, 1313
DpnII	GATC	7 cut(s)	115, 465, 662, 912, 984, 1053, 1311
EaeI	YGGCCR	2 cut(s)	273, 561
Eam1104I	CTCTTC	1 cut(s)	1452
EarI	CTCTTC	1 cut(s)	1452
EciI	GGCGGA	2 cut(s)	147, 187
Eco130I	CCWWGG	6 cut(s)	144, 427, 595, 821, 1158, 1440
Eco31I	GGTCTC	1 cut(s)	1430
Eco47I	GGWCC	2 cut(s)	1218, 1226
Eco81I	CCTNAGG	1 cut(s)	319
Eco91I	GGTNACC	1 cut(s)	1180
EcoNI	CCTNNNNNAGG	1 cut(s)	322
EcoO109I	RGGNCCY	2 cut(s)	852, 1226
EcoO65I	GGTNACC	1 cut(s)	1180
EcoRI	GAATTC	1 cut(s)	543
EcoRII	CCWGG	3 cut(s)	608, 1144, 1220
EcoT14I	CCWWGG	6 cut(s)	144, 427, 595, 821, 1158, 1440
ErhI	CCWWGG	6 cut(s)	144, 427, 595, 821, 1158, 1440
FalI	AAGNNNNNCTT	4 cut(s)	152, 184, 167, 199
FaqI	GGGAC	2 cut(s)	623, 1239
FauI	CCCGC	1 cut(s)	1269
FbaI	TGATCA	2 cut(s)	912, 984
FblI	GTMKAC	3 cut(s)	180, 762, 827
Fnu4HI	GCNGC	9 cut(s)	87, 276, 628, 633, 801, 1170, 1281, 1481, 1539
FokI	GGATG	3 cut(s)	415, 804, 1248
Fsp4HI	GCNGC	9 cut(s)	87, 276, 628, 633, 801, 1170, 1281, 1481, 1539
FspBI	CTAG	5 cut(s)	312, 605, 792, 1134, 1232
GlaI	GCGC	2 cut(s)	631, 1496
GluI	GCNGC	9 cut(s)	87, 276, 628, 633, 801, 1170, 1281, 1481, 1539
GsaI	CCCAGC	2 cut(s)	9, 859
HaeII	RGCGCY	1 cut(s)	633
HaeIII	GGCC	4 cut(s)	275, 563, 853, 1289
HapII	CCGG	4 cut(s)	45, 345, 1206, 1433
HgaI	GACGC	1 cut(s)	256
HhaI	GCGC	2 cut(s)	632, 1497
Hin6I	GCGC	2 cut(s)	630, 1495
HinP1I	GCGC	2 cut(s)	630, 1495
HincII	GTYRAC	4 cut(s)	763, 828, 1036, 1306
HindII	GTYRAC	4 cut(s)	763, 828, 1036, 1306
HinfI	GANTC	3 cut(s)	214, 495, 951
HpaII	CCGG	4 cut(s)	45, 345, 1206, 1433
HphI	GGTGA	3 cut(s)	1160, 1192, 1309
Hpy188I	TCNGA	4 cut(s)	174, 478, 956, 984
Hpy188III	TCNNGA	3 cut(s)	400, 1402, 1511
Hpy99I	CGWCG	5 cut(s)	262, 265, 401, 764, 767
HpyAV	CCTTC	4 cut(s)	154, 169, 394, 1044
HpyCH4III	ACNGT	3 cut(s)	224, 236, 946
HpyCH4IV	ACGT	4 cut(s)	140, 150, 257, 759
HpyCH4V	TGCA	9 cut(s)	371, 506, 635, 876, 965, 1078, 1112, 1172, 1194
HpyF10VI	GCNNNNNNNGC	7 cut(s)	560, 641, 709, 797, 971, 1211, 1286
HpyF3I	CTNAG	5 cut(s)	319, 477, 804, 1092, 1284
HpySE526I	ACGT	4 cut(s)	140, 150, 257, 759
HspAI	GCGC	2 cut(s)	630, 1495
KpnI	GGTACC	1 cut(s)	1247
Ksp22I	TGATCA	2 cut(s)	912, 984
KspI	CCGCGG	1 cut(s)	502
Kzo9I	GATC	7 cut(s)	115, 465, 662, 912, 984, 1053, 1311
LmnI	GCTCC	4 cut(s)	25, 747, 931, 1477
Lsp1109I	GCAGC	6 cut(s)	98, 619, 787, 1156, 1267, 1492
LweI	GCATC	4 cut(s)	393, 974, 1203, 1338
MaeI	CTAG	5 cut(s)	312, 605, 792, 1134, 1232
MaeII	ACGT	4 cut(s)	140, 150, 257, 759
MaeIII	GTNAC	4 cut(s)	136, 331, 1087, 1180
MalI	GATC	7 cut(s)	117, 467, 664, 914, 986, 1055, 1313
MbiI	CCGCTC	1 cut(s)	278
MboI	GATC	7 cut(s)	115, 465, 662, 912, 984, 1053, 1311
MboII	GAAGA	9 cut(s)	186, 661, 1306, 1369, 1372, 1375, 1384, 1411, 1469
MfeI	CAATTG	2 cut(s)	537, 1023
MflI	RGATCY	1 cut(s)	1053
MhlI	GDGCHC	2 cut(s)	373, 508
MlsI	TGGCCA	1 cut(s)	563
MluNI	TGGCCA	1 cut(s)	563
MmeI	TCCRAC	1 cut(s)	1084
Mox20I	TGGCCA	1 cut(s)	563
MroXI	GAANNNNTTC	1 cut(s)	164
MscI	TGGCCA	1 cut(s)	563
MseI	TTAA	3 cut(s)	101, 999, 1187
MslI	CAYNNNNRTG	4 cut(s)	902, 908, 1346, 1526
Msp20I	TGGCCA	1 cut(s)	563
MspA1I	CMGCKG	3 cut(s)	501, 1264, 1280
MspI	CCGG	4 cut(s)	45, 345, 1206, 1433
MspR9I	CCNGG	4 cut(s)	45, 610, 1146, 1222
MunI	CAATTG	2 cut(s)	537, 1023
Mva1269I	GAATGC	1 cut(s)	876
MvaI	CCWGG	3 cut(s)	610, 1146, 1222
MvnI	CGCG	1 cut(s)	501
MwoI	GCNNNNNNNGC	7 cut(s)	560, 641, 709, 797, 971, 1211, 1286
NciI	CCSGG	1 cut(s)	45
NcoI	CCATGG	3 cut(s)	144, 595, 821
NdeII	GATC	7 cut(s)	115, 465, 662, 912, 984, 1053, 1311
NlaIV	GGNNCC	5 cut(s)	854, 1055, 1227, 1245, 1449
NmuCI	GTSAC	2 cut(s)	331, 1180
NspI	RCATGY	1 cut(s)	78
PciI	ACATGT	1 cut(s)	74
PcsI	WCGNNNNNNNCGW	2 cut(s)	254, 393
PctI	GAATGC	1 cut(s)	876
PdmI	GAANNNNTTC	1 cut(s)	164
PfeI	GAWTC	3 cut(s)	214, 495, 951
PflFI	GACNNNGTC	1 cut(s)	758
PflMI	CCANNNNNTGG	1 cut(s)	29
PkrI	GCNGC	9 cut(s)	88, 277, 629, 634, 802, 1171, 1282, 1482, 1540
PpuMI	RGGWCCY	1 cut(s)	1226
PscI	ACATGT	1 cut(s)	74
Psp5II	RGGWCCY	1 cut(s)	1226
Psp6I	CCWGG	3 cut(s)	608, 1144, 1220
PspEI	GGTNACC	1 cut(s)	1180
PspFI	CCCAGC	2 cut(s)	5, 855
PspGI	CCWGG	3 cut(s)	608, 1144, 1220
PspN4I	GGNNCC	5 cut(s)	854, 1055, 1227, 1245, 1449
PspPI	GGNCC	3 cut(s)	852, 1218, 1226
PspPPI	RGGWCCY	1 cut(s)	1226
PstI	CTGCAG	1 cut(s)	637
PstNI	CAGNNNCTG	1 cut(s)	641
PsuI	RGATCY	1 cut(s)	1053
PsyI	GACNNNGTC	1 cut(s)	758
PvuII	CAGCTG	1 cut(s)	1280
RsaI	GTAC	3 cut(s)	221, 1132, 1245
RsaNI	GTAC	3 cut(s)	220, 1131, 1244
RseI	CAYNNNNRTG	4 cut(s)	902, 908, 1346, 1526
SacII	CCGCGG	1 cut(s)	502
SalI	GTCGAC	2 cut(s)	761, 826
SaqAI	TTAA	3 cut(s)	101, 999, 1187
SatI	GCNGC	9 cut(s)	87, 276, 628, 633, 801, 1170, 1281, 1481, 1539
Sau3AI	GATC	7 cut(s)	115, 465, 662, 912, 984, 1053, 1311
Sau96I	GGNCC	3 cut(s)	852, 1218, 1226
ScaI	AGTACT	1 cut(s)	221
ScrFI	CCNGG	4 cut(s)	45, 610, 1146, 1222
SduI	GDGCHC	2 cut(s)	373, 508
SfaNI	GCATC	4 cut(s)	393, 974, 1203, 1338
SfcI	CTRYAG	2 cut(s)	633, 945
Sfr303I	CCGCGG	1 cut(s)	502
SgrBI	CCGCGG	1 cut(s)	502
SgrDI	CGTCGACG	1 cut(s)	761
SinI	GGWCC	2 cut(s)	1218, 1226
SmiMI	CAYNNNNRTG	4 cut(s)	902, 908, 1346, 1526
SmlI	CTYRAG	1 cut(s)	737
SmoI	CTYRAG	1 cut(s)	737
SpeI	ACTAGT	1 cut(s)	1133
SsiI	CCGC	8 cut(s)	132, 198, 276, 499, 501, 627, 1262, 1538
SspMI	CTAG	5 cut(s)	312, 605, 792, 1134, 1232
StyD4I	CCNGG	4 cut(s)	43, 608, 1144, 1220
StyI	CCWWGG	6 cut(s)	144, 427, 595, 821, 1158, 1440
TaaI	ACNGT	3 cut(s)	224, 236, 946
TaiI	ACGT	4 cut(s)	143, 153, 260, 762
TaqI	TCGA	5 cut(s)	231, 576, 762, 827, 1455
TatI	WGTACW	1 cut(s)	219
TauI	GCSGC	3 cut(s)	278, 630, 1541
TfiI	GAWTC	3 cut(s)	214, 495, 951
Tru1I	TTAA	3 cut(s)	101, 999, 1187
Tru9I	TTAA	3 cut(s)	101, 999, 1187
TscAI	CASTG	4 cut(s)	241, 904, 967, 1348
TseFI	GTSAC	2 cut(s)	331, 1180
TseI	GCWGC	6 cut(s)	86, 632, 800, 1169, 1280, 1480
Tsp45I	GTSAC	2 cut(s)	331, 1180
TspDTI	ATGAA	5 cut(s)	58, 276, 920, 1376, 1405
TspGWI	ACGGA	2 cut(s)	385, 734
TspRI	CASTG	4 cut(s)	241, 904, 967, 1348
Tth111I	GACNNNGTC	1 cut(s)	758
Van91I	CCANNNNNTGG	1 cut(s)	29
VneI	GTGCAC	2 cut(s)	369, 504
VpaK11BI	GGWCC	2 cut(s)	1218, 1226
XagI	CCTNNNNNAGG	1 cut(s)	322
XapI	RAATTY	5 cut(s)	50, 227, 543, 1124, 1254
XceI	RCATGY	1 cut(s)	78
XcmI	CCANNNNNNNNNTGG	3 cut(s)	896, 1364, 1459
XmiI	GTMKAC	3 cut(s)	180, 762, 827
XmnI	GAANNNNTTC	1 cut(s)	164
XspI	CTAG	5 cut(s)	312, 605, 792, 1134, 1232
ZrmI	AGTACT	1 cut(s)	221

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.