Rorug07G0175000

Glutathione S-transferase zeta

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
14428829 .. 14429758
930 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0175000.1

Sequence Viewer

Length: 378 bp
ATGGCTCATGGAGTTCTACTATATACTATAGGCCGGAGGGCTTCCCTTCTTGGTTTGGGGAATGGGCGTGAGGATGGTAGTTGTTTACCACATTTCCATGTCAGTAAACTCGATTTGCCACAGATGGGGGAAGCAAGTATGGGATACTGGTTGTTTGGATTGCTGGCTCATGGAGAAGGTTGGCACAATAACCACCATGCTTTTGAGTACTCTGCAAGACAAGGTCTGGCATGGTGGCAATTTGATCTCACGTGGTATATAATAAGGTTCCTTGAAATTGTTGGCTTGACTACCGATGTGAAACTCCCGACGGAAGACCAGAAAAAACGAAGAGCTTTGCACAACAAAATTAAGGAGGAAAGGCTTGACCAACGGTGA

Protein Analysis

125

Amino Acids

14.47

Weight (kDa)

7.97

Isoelectric Point (pI)

38.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FA_desaturase PF00487 23 - 89 7e-06 Fatty acid desaturase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcvI CACGTG 1 cut(s) 252
AfaI GTAC 1 cut(s) 209
AfiI CCNNNNNNNGG 1 cut(s) 125
AgsI TTSAA 1 cut(s) 275
AluBI AGCT 1 cut(s) 335
AluI AGCT 1 cut(s) 335
AoxI GGCC 1 cut(s) 31
BbrPI CACGTG 1 cut(s) 252
BbsI GAAGAC 1 cut(s) 321
BccI CCATC 2 cut(s) 68, 118
BciVI GTATCC 1 cut(s) 137
BfmI CTRYAG 1 cut(s) 27
BfuI GTATCC 1 cut(s) 137
BmcAI AGTACT 1 cut(s) 209
BmiI GGNNCC 1 cut(s) 269
BpiI GAAGAC 1 cut(s) 321
BsaAI YACGTR 1 cut(s) 252
Bsc4I CCNNNNNNNGG 1 cut(s) 125
Bse1I ACTGG 1 cut(s) 152
BseGI GGATG 1 cut(s) 79
BseLI CCNNNNNNNGG 1 cut(s) 125
BseNI ACTGG 1 cut(s) 152
BshFI GGCC 1 cut(s) 33
BsiSI CCGG 1 cut(s) 34
BslI CCNNNNNNNGG 1 cut(s) 125
BsnI GGCC 1 cut(s) 33
Bsp143I GATC 1 cut(s) 244
BspANI GGCC 1 cut(s) 33
BspLI GGNNCC 1 cut(s) 269
BspQI GCTCTTC 1 cut(s) 325
BsrI ACTGG 1 cut(s) 152
BssMI GATC 1 cut(s) 244
Bst4CI ACNGT 1 cut(s) 375
Bst6I CTCTTC 1 cut(s) 325
BstBAI YACGTR 1 cut(s) 252
BstC8I GCNNGC 1 cut(s) 165
BstF5I GGATG 1 cut(s) 79
BstKTI GATC 1 cut(s) 247
BstMBI GATC 1 cut(s) 244
BstSFI CTRYAG 1 cut(s) 27
BstV2I GAAGAC 1 cut(s) 321
BsuI GTATCC 1 cut(s) 137
BsuRI GGCC 1 cut(s) 33
BtsCI GGATG 1 cut(s) 79
Cac8I GCNNGC 1 cut(s) 165
Csp6I GTAC 1 cut(s) 208
CviAII CATG 5 cut(s) 8, 98, 170, 197, 231
CviJI RGCY 7 cut(s) 5, 33, 41, 167, 285, 335, 364
CviKI_1 RGCY 7 cut(s) 5, 33, 41, 167, 285, 335, 364
CviQI GTAC 1 cut(s) 208
DpnI GATC 1 cut(s) 246
DpnII GATC 1 cut(s) 244
Eam1104I CTCTTC 1 cut(s) 325
EarI CTCTTC 1 cut(s) 325
Eco72I CACGTG 1 cut(s) 252
FaeI CATG 5 cut(s) 11, 101, 173, 200, 234
FatI CATG 5 cut(s) 7, 97, 169, 196, 230
FokI GGATG 1 cut(s) 86
HaeIII GGCC 1 cut(s) 33
HapII CCGG 1 cut(s) 34
Hin1II CATG 5 cut(s) 11, 101, 173, 200, 234
HpaII CCGG 1 cut(s) 34
Hpy166II GTNNAC 2 cut(s) 86, 107
Hpy188III TCNNGA 1 cut(s) 307
Hpy8I GTNNAC 2 cut(s) 86, 107
Hpy99I CGWCG 1 cut(s) 313
HpyAV CCTTC 2 cut(s) 56, 170
HpyCH4III ACNGT 1 cut(s) 375
HpyCH4IV ACGT 1 cut(s) 251
HpyCH4V TGCA 2 cut(s) 215, 340
HpySE526I ACGT 1 cut(s) 251
Hsp92II CATG 5 cut(s) 11, 101, 173, 200, 234
Kzo9I GATC 1 cut(s) 244
LguI GCTCTTC 1 cut(s) 325
LpnPI CCDG 5 cut(s) 47, 133, 149, 212, 332
MaeII ACGT 1 cut(s) 251
MalI GATC 1 cut(s) 246
MboI GATC 1 cut(s) 244
MboII GAAGA 2 cut(s) 326, 342
MluCI AATT 3 cut(s) 239, 276, 348
MnlI CCTC 3 cut(s) 30, 64, 349
MseI TTAA 1 cut(s) 351
MslI CAYNNNNRTG 1 cut(s) 96
MspI CCGG 1 cut(s) 34
NdeII GATC 1 cut(s) 244
NlaIII CATG 5 cut(s) 11, 101, 173, 200, 234
NlaIV GGNNCC 1 cut(s) 269
PciSI GCTCTTC 1 cut(s) 325
PflFI GACNNNGTC 1 cut(s) 222
PmaCI CACGTG 1 cut(s) 252
PmlI CACGTG 1 cut(s) 252
Ppu21I YACGTR 1 cut(s) 252
PspCI CACGTG 1 cut(s) 252
PspN4I GGNNCC 1 cut(s) 269
PsyI GACNNNGTC 1 cut(s) 222
RsaI GTAC 1 cut(s) 209
RsaNI GTAC 1 cut(s) 208
RseI CAYNNNNRTG 1 cut(s) 96
SapI GCTCTTC 1 cut(s) 325
SaqAI TTAA 1 cut(s) 351
Sau3AI GATC 1 cut(s) 244
ScaI AGTACT 1 cut(s) 209
SetI ASST 5 cut(s) 181, 226, 254, 269, 337
SfcI CTRYAG 1 cut(s) 27
SmiMI CAYNNNNRTG 1 cut(s) 96
Sse9I AATT 3 cut(s) 239, 276, 348
TaaI ACNGT 1 cut(s) 375
TaiI ACGT 1 cut(s) 254
TaqI TCGA 1 cut(s) 111
TasI AATT 3 cut(s) 239, 276, 348
TatI WGTACW 1 cut(s) 207
Tru1I TTAA 1 cut(s) 351
Tru9I TTAA 1 cut(s) 351
TspGWI ACGGA 1 cut(s) 326
Tth111I GACNNNGTC 1 cut(s) 222
ZrmI AGTACT 1 cut(s) 209
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.