Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001374

Physical Location & Seq

Genomic Coordinates Forward (+)

628730 .. 631165

Gene Structure 2436 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G02390.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 666 bp

ATGGCGAATTCCGGCGAAGAGAAGTTGAAGCTCTACTCTTACTGGAGAAGCTCGTGTGCTCATCGTGTCCGTATCGCCCTCGCTTTGAAAGGGCTTGATTATGAGTATATACCAGTGAATTTGCTCAAGGGTGATCAATTCGATTCAGATTTCAAGAAGATCAATCCAATGGGAACTGTACCAGCTCTGGTGGATGGAGATGTTGTGATTAATGATTCTTTTGCGATAATAATGTATCTGGATGAGAAGTACCCTGAGCCACCTTTGTTACCTCGTGACCTCCATAAACGAGCTGTGAATTACCAGGCAATGAGTATTGTCTTGTCTGGCATACAGCCTCATCAAAATCTGGCTGTTATTAGGTATATCGAGGAAAAGATAAATGTGGAGGAGAAGACTGCCTGGGTTAATAATGCTATCACAAAAGGATTTACAGCTCTCGAGAAACTGTTGGTGAATTGCGCTGGGAAACATGCGACTGGTGATGAAATTTACCTGGCTGATCTCTTTCTAGCACCACAGATCCACGGAGCAATCAACAGATTCCAGATTAACATGGAACCGTACCCAACTCTTGCAAAATGTTACGAATCATACAACGAACTGCCTGCGTTTCAAAATGCACTACCGGAAAAGCAGCCAGATGCTCCTTCTTCCACCATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006725 GO:0008150 GO:0008152 GO:0009056 GO:0009404 GO:0009407 GO:0009636 GO:0009987 GO:0016034 GO:0016054 GO:0016853 GO:0016859 GO:0018958 GO:0019336 GO:0019439 GO:0019748 GO:0019752 GO:0032787 GO:0042221 GO:0043436 GO:0044237 GO:0044248 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046395 GO:0050896 GO:0071704 GO:0072329 GO:0098754 GO:1901360 GO:1901361 GO:1901575 GO:1901615 GO:1901616 GO:1901999 GO:1902000

KEGG Pathways

Metabolic & Signaling

ko00350 ko00643 ko01100 ko01120 map00350 map00643 map01100 map01120

Pfam Domains

Protein Families

GST_C GST_C_2 GST_C_3 GST_N GST_N_3

Protein Analysis

221

Amino Acids

24.89

Weight (kDa)

5.57

Isoelectric Point (pI)

36.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GST_N	PF02798	8 - 89	2.8e-15	Glutathione S-transferase, N-terminal domain
GST_N_3	PF13417	11 - 95	2.1e-17	Glutathione S-transferase, N-terminal domain
GST_N_2	PF13409	17 - 89	1.4e-17	Glutathione S-transferase, N-terminal domain
GST_C_3	PF14497	130 - 211	3.1e-07	Glutathione S-transferase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001374)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02380 AT2G02390 AT2G02390 AT2G02390 AT2G02390
fragaria_vesca	FvH4_5g27160
malus_domestica	MD08G1250500.v1.1 MD15G1445700.v1.1
prunus_persica	Prupe.1G587700_v2.0.a1 Prupe.1G587700_v2.0.a1
pyrus_communis	pycom08g21730 pycom15g39250
rosa_chinensis	RchiOBHm_Chr7g0218201 RchiOBHm_Chr7g0218231 RchiOBHm_Chr7g0218251
rosa_laevigata	RLG00000002386 RLG00000002388 RLG00000002390
rosa_multiflora	Rmu_sc0004956.1_g000003 Rmu_sc0008593.1_g000004 Rmu_sc0008593.1_g000008 Rmu_sc0011666.1_g000005 Rmu_sc0021950.1_g000001 Rmu_sc0024798.1_g000001
rosa_roxburghii	Rroxscaffold_1G00032070 Rroxscaffold_3G00241200 Rroxscaffold_3G00241210
rosa_rugosa	Rorug07G0174800 Rorug07G0174900 Rorug07G0175000 Rorug07G0175200 Rorug07G0175300 Rorug07G0175400 Rorug07G0175500 Rorug07G0175500 Rorug07G0175600 Rorug07G0175700 Rorug07G0175800
rosa_samantha	Rh7AG304100 Rh7AG304200 Rh7BG308500 Rh7BG308600 Rh7BG308700 Rh7BG308800 Rh7CG322500 Rh7CG322700 Rh7CG334300 Rh7DG304300 Rh7DG316400
rosa_wichuraiana	Rw7G025830 Rw7G026860 Rw7G026940 Rw7G026950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AclWI	GGATC	1 cut(s)	517
AcsI	RAATTY	3 cut(s)	7, 118, 489
AfaI	GTAC	3 cut(s)	180, 251, 566
AgsI	TTSAA	4 cut(s)	28, 88, 154, 617
AjnI	CCWGG	3 cut(s)	303, 401, 495
AluBI	AGCT	5 cut(s)	31, 51, 185, 293, 437
AluI	AGCT	5 cut(s)	31, 51, 185, 293, 437
Alw21I	GWGCWC	1 cut(s)	61
AlwI	GGATC	1 cut(s)	517
Ama87I	CYCGRG	1 cut(s)	440
ApeKI	GCWGC	1 cut(s)	637
ApoI	RAATTY	3 cut(s)	7, 118, 489
AseI	ATTAAT	1 cut(s)	210
AspLEI	GCGC	1 cut(s)	464
AsuHPI	GGTGA	3 cut(s)	143, 466, 494
AvaI	CYCGRG	1 cut(s)	440
BauI	CACGAG	2 cut(s)	52, 273
BbsI	GAAGAC	1 cut(s)	401
Bbv12I	GWGCWC	1 cut(s)	61
BbvI	GCAGC	1 cut(s)	649
BccI	CCATC	1 cut(s)	188
BcgI	CGANNNNNNTGC	2 cut(s)	590, 624
BciT130I	CCWGG	3 cut(s)	305, 403, 497
BclI	TGATCA	1 cut(s)	133
BfaI	CTAG	1 cut(s)	512
BisI	GCNGC	1 cut(s)	638
BlsI	GCNGC	1 cut(s)	639
Bme1390I	CCNGG	3 cut(s)	305, 403, 497
BmeT110I	CYCGRG	1 cut(s)	440
BmiI	GGNNCC	1 cut(s)	561
BmrFI	CCNGG	3 cut(s)	305, 403, 497
BmsI	GCATC	1 cut(s)	634
BpiI	GAAGAC	1 cut(s)	401
BpmI	CTGGAG	1 cut(s)	64
Bpu10I	CCTNAGC	1 cut(s)	255
BpuEI	CTTGAG	1 cut(s)	110
BsaJI	CCNNGG	2 cut(s)	402, 526
BsaWI	WCCGGW	1 cut(s)	628
BsaXI	ACNNNNNCTCC	2 cut(s)	189, 219
Bse1I	ACTGG	3 cut(s)	47, 113, 484
Bse3DI	GCAATG	1 cut(s)	315
BseBI	CCWGG	3 cut(s)	305, 403, 497
BseDI	CCNNGG	2 cut(s)	402, 526
BseGI	GGATG	2 cut(s)	199, 247
BseMI	GCAATG	1 cut(s)	315
BseMII	CTCAG	1 cut(s)	246
BseNI	ACTGG	3 cut(s)	47, 113, 484
BseRI	GAGGAG	1 cut(s)	404
BseXI	GCAGC	1 cut(s)	649
BseYI	CCCAGC	1 cut(s)	464
BsiHKAI	GWGCWC	1 cut(s)	61
BsiHKCI	CYCGRG	1 cut(s)	440
BsiSI	CCGG	2 cut(s)	12, 629
BsoBI	CYCGRG	1 cut(s)	440
Bsp1286I	GDGCHC	1 cut(s)	61
Bsp143I	GATC	4 cut(s)	133, 159, 502, 522
BspCNI	CTCAG	1 cut(s)	247
BspLI	GGNNCC	1 cut(s)	561
BspPI	GGATC	1 cut(s)	517
BsrDI	GCAATG	1 cut(s)	315
BsrI	ACTGG	3 cut(s)	47, 113, 484
BssECI	CCNNGG	2 cut(s)	402, 526
BssMI	GATC	4 cut(s)	133, 159, 502, 522
BssSI	CACGAG	2 cut(s)	52, 273
Bst2BI	CACGAG	2 cut(s)	52, 273
Bst2UI	CCWGG	3 cut(s)	305, 403, 497
Bst4CI	ACNGT	3 cut(s)	178, 450, 564
Bst6I	CTCTTC	1 cut(s)	12
BstC8I	GCNNGC	1 cut(s)	609
BstDEI	CTNAG	1 cut(s)	255
BstDSI	CCRYGG	1 cut(s)	526
BstF5I	GGATG	2 cut(s)	199, 247
BstHHI	GCGC	1 cut(s)	464
BstKTI	GATC	4 cut(s)	136, 162, 505, 525
BstMBI	GATC	4 cut(s)	133, 159, 502, 522
BstNI	CCWGG	3 cut(s)	305, 403, 497
BstNSI	RCATGY	1 cut(s)	476
BstSCI	CCNGG	3 cut(s)	303, 401, 495
BstV1I	GCAGC	1 cut(s)	649
BstV2I	GAAGAC	1 cut(s)	401
BstX2I	RGATCY	1 cut(s)	522
BstYI	RGATCY	1 cut(s)	522
BtgI	CCRYGG	1 cut(s)	526
BtsCI	GGATG	2 cut(s)	199, 247
BtsIMutI	CAGTG	1 cut(s)	120
Cac8I	GCNNGC	1 cut(s)	609
CfoI	GCGC	1 cut(s)	464
Csp6I	GTAC	3 cut(s)	179, 250, 565
CviAII	CATG	2 cut(s)	473, 556
CviQI	GTAC	3 cut(s)	179, 250, 565
DdeI	CTNAG	1 cut(s)	255
DpnI	GATC	4 cut(s)	135, 161, 504, 524
DpnII	GATC	4 cut(s)	133, 159, 502, 522
Eam1104I	CTCTTC	1 cut(s)	12
EarI	CTCTTC	1 cut(s)	12
Eco88I	CYCGRG	1 cut(s)	440
EcoRI	GAATTC	1 cut(s)	7
EcoRII	CCWGG	3 cut(s)	303, 401, 495
FaeI	CATG	2 cut(s)	476, 559
FaiI	YATR	9 cut(s)	102, 108, 110, 285, 332, 366, 474, 557, 595
FatI	CATG	2 cut(s)	472, 555
FbaI	TGATCA	1 cut(s)	133
Fnu4HI	GCNGC	1 cut(s)	638
FokI	GGATG	2 cut(s)	206, 254
Fsp4HI	GCNGC	1 cut(s)	638
FspBI	CTAG	1 cut(s)	512
GlaI	GCGC	1 cut(s)	463
GluI	GCNGC	1 cut(s)	638
GsaI	CCCAGC	1 cut(s)	468
GsuI	CTGGAG	1 cut(s)	64
HapII	CCGG	2 cut(s)	12, 629
HhaI	GCGC	1 cut(s)	464
Hin1II	CATG	2 cut(s)	476, 559
Hin6I	GCGC	1 cut(s)	462
HinP1I	GCGC	1 cut(s)	462
HinfI	GANTC	4 cut(s)	143, 215, 543, 590
HpaII	CCGG	2 cut(s)	12, 629
HphI	GGTGA	3 cut(s)	143, 466, 494
Hpy188I	TCNGA	2 cut(s)	148, 665
Hpy188III	TCNNGA	6 cut(s)	154, 239, 275, 440, 442, 547
HpyAV	CCTTC	1 cut(s)	660
HpyCH4III	ACNGT	3 cut(s)	178, 450, 564
HpyCH4V	TGCA	2 cut(s)	578, 623
HpyF3I	CTNAG	1 cut(s)	255
Hsp92II	CATG	2 cut(s)	476, 559
HspAI	GCGC	1 cut(s)	462
Ksp22I	TGATCA	1 cut(s)	133
Kzo9I	GATC	4 cut(s)	133, 159, 502, 522
LmnI	GCTCC	2 cut(s)	530, 652
Lsp1109I	GCAGC	1 cut(s)	649
LweI	GCATC	1 cut(s)	634
MaeI	CTAG	1 cut(s)	512
MaeIII	GTNAC	3 cut(s)	267, 275, 584
MalI	GATC	4 cut(s)	135, 161, 504, 524
MboI	GATC	4 cut(s)	133, 159, 502, 522
MboII	GAAGA	4 cut(s)	29, 169, 406, 645
MflI	RGATCY	1 cut(s)	522
MhlI	GDGCHC	1 cut(s)	61
MluCI	AATT	6 cut(s)	7, 118, 137, 298, 457, 489
MnlI	CCTC	6 cut(s)	89, 282, 290, 348, 364, 382
MseI	TTAA	3 cut(s)	210, 408, 552
MspI	CCGG	2 cut(s)	12, 629
MspR9I	CCNGG	3 cut(s)	305, 403, 497
MvaI	CCWGG	3 cut(s)	305, 403, 497
NdeII	GATC	4 cut(s)	133, 159, 502, 522
NlaIII	CATG	2 cut(s)	476, 559
NlaIV	GGNNCC	1 cut(s)	561
NmuCI	GTSAC	1 cut(s)	275
NspI	RCATGY	1 cut(s)	476
PaeR7I	CTCGAG	1 cut(s)	440
PfeI	GAWTC	4 cut(s)	143, 215, 543, 590
PkrI	GCNGC	1 cut(s)	639
PshBI	ATTAAT	1 cut(s)	210
Psp6I	CCWGG	3 cut(s)	303, 401, 495
PspFI	CCCAGC	1 cut(s)	464
PspGI	CCWGG	3 cut(s)	303, 401, 495
PspN4I	GGNNCC	1 cut(s)	561
PsuI	RGATCY	1 cut(s)	522
RsaI	GTAC	3 cut(s)	180, 251, 566
RsaNI	GTAC	3 cut(s)	179, 250, 565
SaqAI	TTAA	3 cut(s)	210, 408, 552
SatI	GCNGC	1 cut(s)	638
Sau3AI	GATC	4 cut(s)	133, 159, 502, 522
ScrFI	CCNGG	3 cut(s)	305, 403, 497
SduI	GDGCHC	1 cut(s)	61
SfaNI	GCATC	1 cut(s)	634
Sfr274I	CTCGAG	1 cut(s)	440
SlaI	CTCGAG	1 cut(s)	440
SmlI	CTYRAG	2 cut(s)	125, 440
SmoI	CTYRAG	2 cut(s)	125, 440
Sse9I	AATT	6 cut(s)	7, 118, 137, 298, 457, 489
SspMI	CTAG	1 cut(s)	512
StyD4I	CCNGG	3 cut(s)	303, 401, 495
TaaI	ACNGT	3 cut(s)	178, 450, 564
TaqI	TCGA	3 cut(s)	141, 369, 441
TasI	AATT	6 cut(s)	7, 118, 137, 298, 457, 489
TfiI	GAWTC	4 cut(s)	143, 215, 543, 590
Tru1I	TTAA	3 cut(s)	210, 408, 552
Tru9I	TTAA	3 cut(s)	210, 408, 552
TscAI	CASTG	1 cut(s)	120
TseFI	GTSAC	1 cut(s)	275
TseI	GCWGC	1 cut(s)	637
Tsp45I	GTSAC	1 cut(s)	275
TspDTI	ATGAA	1 cut(s)	501
TspGWI	ACGGA	2 cut(s)	59, 543
TspRI	CASTG	1 cut(s)	120
VspI	ATTAAT	1 cut(s)	210
XapI	RAATTY	3 cut(s)	7, 118, 489
XceI	RCATGY	1 cut(s)	476
XhoI	CTCGAG	1 cut(s)	440
XspI	CTAG	1 cut(s)	512

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.