Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001374

Physical Location & Seq

Genomic Coordinates Reverse (-)

47722113 .. 47727624

Gene Structure 5512 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G587700.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 666 bp

ATGGCGAGTGAAAGTGGCGATGATCAAGAGCTGAAGCTGTATTCCTACTGGAGGAGCACTTGCTCCTTCCGTGTCCGAATTGCTCTCAACTTAAAAGGGCTCAAATACGAGTACAAAGCTGTAAACCTGTTGAAGGGAGAGCAATTCAGTCCCGAGTTTACAAAGCTCAATCCTATCGGCTATGTGCCAGTGCTTGTGGATGGGGACATTGTTGTTGCTGACTCATTTGCCATCTTAATATATTTAGAGGGCAAATACCCTCAGCATCCATTGTTACCTCAAGATCTTCAGAAAAAGGCCATCAATTACCAGGCTGCAAATATCGTTTCCTCAAGCATACAGCCTCTACAGAATCTGGCTATACTGAAGTACATTGAAGAAAAAGTTAGTCCCGAAGAGAAACTTGAATGGGCTAAAGTTCATATTGGAAAAGGCTTTGCAGCTCTTGAAGAACTGCTGAACAACTATGCAGGGAGATATGCAACTGGGGATGAAGTTTTCTTGGCAGATTTGTTTCTAGCACCCCAGCTTTATGCAGCCATTGGAAGGTTCCATGTAGACATGACTCAGTTTCCCCTTTTGGCCAGGTTGCATGAGGCATACAGTAAGATCCCAGAATTCCTAGATGCTCTACCAGAAAACCAGCCAGATGCTCCTTCTTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006725 GO:0008150 GO:0008152 GO:0009056 GO:0009404 GO:0009407 GO:0009636 GO:0009987 GO:0016034 GO:0016054 GO:0016853 GO:0016859 GO:0018958 GO:0019336 GO:0019439 GO:0019748 GO:0019752 GO:0032787 GO:0042221 GO:0043436 GO:0044237 GO:0044248 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046395 GO:0050896 GO:0071704 GO:0072329 GO:0098754 GO:1901360 GO:1901361 GO:1901575 GO:1901615 GO:1901616 GO:1901999 GO:1902000

KEGG Pathways

Metabolic & Signaling

ko00350 ko00643 ko01100 ko01120 map00350 map00643 map01100 map01120

Pfam Domains

Protein Families

GST_C GST_C_2 GST_C_3 GST_N GST_N_3

Protein Analysis

222

Amino Acids

24.88

Weight (kDa)

5.17

Isoelectric Point (pI)

42.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001374)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02380 AT2G02390 AT2G02390 AT2G02390 AT2G02390
fragaria_vesca	FvH4_5g27160
malus_domestica	MD08G1250500.v1.1 MD15G1445700.v1.1
prunus_persica	Prupe.1G587700_v2.0.a1 Prupe.1G587700_v2.0.a1
pyrus_communis	pycom08g21730 pycom15g39250
rosa_chinensis	RchiOBHm_Chr7g0218201 RchiOBHm_Chr7g0218231 RchiOBHm_Chr7g0218251
rosa_laevigata	RLG00000002386 RLG00000002388 RLG00000002390
rosa_multiflora	Rmu_sc0004956.1_g000003 Rmu_sc0008593.1_g000004 Rmu_sc0008593.1_g000008 Rmu_sc0011666.1_g000005 Rmu_sc0021950.1_g000001 Rmu_sc0024798.1_g000001
rosa_roxburghii	Rroxscaffold_1G00032070 Rroxscaffold_3G00241200 Rroxscaffold_3G00241210
rosa_rugosa	Rorug07G0174800 Rorug07G0174900 Rorug07G0175000 Rorug07G0175200 Rorug07G0175300 Rorug07G0175400 Rorug07G0175500 Rorug07G0175500 Rorug07G0175600 Rorug07G0175700 Rorug07G0175800
rosa_samantha	Rh7AG304100 Rh7AG304200 Rh7BG308500 Rh7BG308600 Rh7BG308700 Rh7BG308800 Rh7CG322500 Rh7CG322700 Rh7CG334300 Rh7DG304300 Rh7DG316400
rosa_wichuraiana	Rw7G025830 Rw7G026860 Rw7G026940 Rw7G026950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	558
AclWI	GGATC	1 cut(s)	604
AcoI	YGGCCR	1 cut(s)	582
AcsI	RAATTY	1 cut(s)	617
AcuI	CTGAAG	3 cut(s)	53, 272, 386
AfaI	GTAC	2 cut(s)	113, 371
AfiI	CCNNNNNNNGG	3 cut(s)	51, 133, 546
AgsI	TTSAA	4 cut(s)	133, 377, 407, 449
AjnI	CCWGG	2 cut(s)	309, 584
AluBI	AGCT	6 cut(s)	31, 37, 119, 166, 443, 529
AluI	AGCT	6 cut(s)	31, 37, 119, 166, 443, 529
Alw21I	GWGCWC	1 cut(s)	59
AlwI	GGATC	1 cut(s)	604
AlwNI	CAGNNNCTG	1 cut(s)	355
Ama87I	CYCGRG	1 cut(s)	152
AoxI	GGCC	2 cut(s)	297, 582
ApeKI	GCWGC	3 cut(s)	314, 440, 536
ApoI	RAATTY	1 cut(s)	617
AvaI	CYCGRG	1 cut(s)	152
BalI	TGGCCA	1 cut(s)	584
BanII	GRGCYC	1 cut(s)	102
Bbv12I	GWGCWC	1 cut(s)	59
BbvCI	CCTCAGC	1 cut(s)	261
BbvI	GCAGC	3 cut(s)	301, 452, 548
BccI	CCATC	3 cut(s)	194, 239, 308
BciT130I	CCWGG	2 cut(s)	311, 586
BclI	TGATCA	1 cut(s)	22
BfaI	CTAG	2 cut(s)	518, 623
BfmI	CTRYAG	1 cut(s)	347
BglII	AGATCT	1 cut(s)	283
BisI	GCNGC	3 cut(s)	315, 441, 537
BlsI	GCNGC	3 cut(s)	316, 442, 538
Bme1390I	CCNGG	2 cut(s)	311, 586
BmeT110I	CYCGRG	1 cut(s)	152
BmiI	GGNNCC	1 cut(s)	551
BmrFI	CCNGG	2 cut(s)	311, 586
BmrI	ACTGGG	1 cut(s)	495
BmsI	GCATC	3 cut(s)	274, 616, 640
BmuI	ACTGGG	1 cut(s)	495
BpmI	CTGGAG	1 cut(s)	70
Bpu10I	CCTNAGC	1 cut(s)	261
BpuEI	CTTGAG	2 cut(s)	264, 316
Bsc4I	CCNNNNNNNGG	3 cut(s)	51, 133, 546
Bse1I	ACTGG	3 cut(s)	53, 188, 490
BseBI	CCWGG	2 cut(s)	311, 586
BseGI	GGATG	3 cut(s)	205, 265, 496
BseLI	CCNNNNNNNGG	3 cut(s)	51, 133, 546
BseMII	CTCAG	2 cut(s)	275, 581
BseNI	ACTGG	3 cut(s)	53, 188, 490
BseRI	GAGGAG	1 cut(s)	67
BseXI	GCAGC	3 cut(s)	301, 452, 548
BseYI	CCCAGC	1 cut(s)	525
BshFI	GGCC	2 cut(s)	299, 584
BsiHKAI	GWGCWC	1 cut(s)	59
BsiHKCI	CYCGRG	1 cut(s)	152
BslFI	GGGAC	3 cut(s)	135, 218, 375
BslI	CCNNNNNNNGG	3 cut(s)	51, 133, 546
BsmFI	GGGAC	3 cut(s)	135, 218, 375
BsnI	GGCC	2 cut(s)	299, 584
BsoBI	CYCGRG	1 cut(s)	152
Bsp1286I	GDGCHC	2 cut(s)	59, 102
Bsp143I	GATC	3 cut(s)	22, 283, 609
BspANI	GGCC	2 cut(s)	299, 584
BspCNI	CTCAG	2 cut(s)	274, 580
BspLI	GGNNCC	1 cut(s)	551
BspPI	GGATC	1 cut(s)	604
BsrI	ACTGG	3 cut(s)	53, 188, 490
BssMI	GATC	3 cut(s)	22, 283, 609
Bst2UI	CCWGG	2 cut(s)	311, 586
Bst4CI	ACNGT	1 cut(s)	605
Bst6I	CTCTTC	1 cut(s)	390
BstDEI	CTNAG	2 cut(s)	261, 567
BstENI	CCTNNNNNAGG	2 cut(s)	49, 131
BstF5I	GGATG	3 cut(s)	205, 265, 496
BstKTI	GATC	3 cut(s)	25, 286, 612
BstMBI	GATC	3 cut(s)	22, 283, 609
BstNI	CCWGG	2 cut(s)	311, 586
BstSCI	CCNGG	2 cut(s)	309, 584
BstSFI	CTRYAG	1 cut(s)	347
BstV1I	GCAGC	3 cut(s)	301, 452, 548
BstX2I	RGATCY	2 cut(s)	283, 609
BstYI	RGATCY	2 cut(s)	283, 609
BsuRI	GGCC	2 cut(s)	299, 584
BtgZI	GCGATG	1 cut(s)	33
BtsCI	GGATG	3 cut(s)	205, 265, 496
BtsIMutI	CAGTG	1 cut(s)	195
CaiI	CAGNNNCTG	1 cut(s)	355
Csp6I	GTAC	2 cut(s)	112, 370
CviAII	CATG	3 cut(s)	554, 562, 593
CviQI	GTAC	2 cut(s)	112, 370
DdeI	CTNAG	2 cut(s)	261, 567
DpnI	GATC	3 cut(s)	24, 285, 611
DpnII	GATC	3 cut(s)	22, 283, 609
EaeI	YGGCCR	1 cut(s)	582
Eam1104I	CTCTTC	1 cut(s)	390
EarI	CTCTTC	1 cut(s)	390
Eco24I	GRGCYC	1 cut(s)	102
Eco57I	CTGAAG	3 cut(s)	53, 272, 386
Eco88I	CYCGRG	1 cut(s)	152
EcoNI	CCTNNNNNAGG	2 cut(s)	49, 131
EcoRI	GAATTC	1 cut(s)	617
EcoRII	CCWGG	2 cut(s)	309, 584
EcoT38I	GRGCYC	1 cut(s)	102
FaeI	CATG	3 cut(s)	557, 565, 596
FalI	AAGNNNNNCTT	2 cut(s)	387, 419
FaqI	GGGAC	3 cut(s)	135, 218, 375
FatI	CATG	3 cut(s)	553, 561, 592
FbaI	TGATCA	1 cut(s)	22
FblI	GTMKAC	1 cut(s)	558
Fnu4HI	GCNGC	3 cut(s)	315, 441, 537
FokI	GGATG	3 cut(s)	212, 252, 503
FriOI	GRGCYC	1 cut(s)	102
Fsp4HI	GCNGC	3 cut(s)	315, 441, 537
FspBI	CTAG	2 cut(s)	518, 623
GluI	GCNGC	3 cut(s)	315, 441, 537
GsaI	CCCAGC	1 cut(s)	529
GsuI	CTGGAG	1 cut(s)	70
HaeIII	GGCC	2 cut(s)	299, 584
Hin1II	CATG	3 cut(s)	557, 565, 596
HinfI	GANTC	3 cut(s)	221, 352, 565
Hpy166II	GTNNAC	3 cut(s)	124, 159, 559
Hpy188I	TCNGA	2 cut(s)	77, 291
Hpy188III	TCNNGA	5 cut(s)	26, 152, 281, 392, 446
Hpy8I	GTNNAC	3 cut(s)	124, 159, 559
HpyAV	CCTTC	4 cut(s)	76, 127, 540, 666
HpyCH4III	ACNGT	1 cut(s)	605
HpyCH4V	TGCA	6 cut(s)	317, 440, 470, 482, 536, 592
HpyF3I	CTNAG	2 cut(s)	261, 567
Hsp92II	CATG	3 cut(s)	557, 565, 596
Ksp22I	TGATCA	1 cut(s)	22
Kzo9I	GATC	3 cut(s)	22, 283, 609
LmnI	GCTCC	3 cut(s)	54, 68, 658
Lsp1109I	GCAGC	3 cut(s)	301, 452, 548
LweI	GCATC	3 cut(s)	274, 616, 640
MaeI	CTAG	2 cut(s)	518, 623
MaeIII	GTNAC	1 cut(s)	273
MalI	GATC	3 cut(s)	24, 285, 611
MboI	GATC	3 cut(s)	22, 283, 609
MboII	GAAGA	5 cut(s)	278, 389, 407, 461, 651
MflI	RGATCY	2 cut(s)	283, 609
MhlI	GDGCHC	2 cut(s)	59, 102
MlsI	TGGCCA	1 cut(s)	584
MluCI	AATT	4 cut(s)	78, 143, 304, 617
MluNI	TGGCCA	1 cut(s)	584
MlyI	GAGTC	2 cut(s)	215, 559
MnlI	CCTC	7 cut(s)	45, 241, 270, 288, 340, 354, 589
Mox20I	TGGCCA	1 cut(s)	584
MscI	TGGCCA	1 cut(s)	584
MseI	TTAA	2 cut(s)	92, 236
Msp20I	TGGCCA	1 cut(s)	584
MspR9I	CCNGG	2 cut(s)	311, 586
MvaI	CCWGG	2 cut(s)	311, 586
NdeII	GATC	3 cut(s)	22, 283, 609
NlaIII	CATG	3 cut(s)	557, 565, 596
NlaIV	GGNNCC	1 cut(s)	551
PfeI	GAWTC	1 cut(s)	352
PkrI	GCNGC	3 cut(s)	316, 442, 538
PleI	GAGTC	2 cut(s)	215, 559
PpsI	GAGTC	2 cut(s)	215, 559
Psp6I	CCWGG	2 cut(s)	309, 584
PspFI	CCCAGC	1 cut(s)	525
PspGI	CCWGG	2 cut(s)	309, 584
PspN4I	GGNNCC	1 cut(s)	551
PstNI	CAGNNNCTG	1 cut(s)	355
PsuI	RGATCY	2 cut(s)	283, 609
RsaI	GTAC	2 cut(s)	113, 371
RsaNI	GTAC	2 cut(s)	112, 370
SaqAI	TTAA	2 cut(s)	92, 236
SatI	GCNGC	3 cut(s)	315, 441, 537
Sau3AI	GATC	3 cut(s)	22, 283, 609
SchI	GAGTC	2 cut(s)	215, 559
ScrFI	CCNGG	2 cut(s)	311, 586
SduI	GDGCHC	2 cut(s)	59, 102
SfaNI	GCATC	3 cut(s)	274, 616, 640
SfcI	CTRYAG	1 cut(s)	347
SmlI	CTYRAG	2 cut(s)	279, 331
SmoI	CTYRAG	2 cut(s)	279, 331
Sse9I	AATT	4 cut(s)	78, 143, 304, 617
SspMI	CTAG	2 cut(s)	518, 623
StyD4I	CCNGG	2 cut(s)	309, 584
TaaI	ACNGT	1 cut(s)	605
TasI	AATT	4 cut(s)	78, 143, 304, 617
TatI	WGTACW	2 cut(s)	111, 369
TfiI	GAWTC	1 cut(s)	352
Tru1I	TTAA	2 cut(s)	92, 236
Tru9I	TTAA	2 cut(s)	92, 236
TscAI	CASTG	1 cut(s)	195
TseI	GCWGC	3 cut(s)	314, 440, 536
TspDTI	ATGAA	3 cut(s)	410, 507, 651
TspGWI	ACGGA	1 cut(s)	59
TspRI	CASTG	1 cut(s)	195
XagI	CCTNNNNNAGG	2 cut(s)	49, 131
XapI	RAATTY	1 cut(s)	617
XmiI	GTMKAC	1 cut(s)	558
XspI	CTAG	2 cut(s)	518, 623

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.