Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0003400

Physical Location & Seq

Genomic Coordinates Forward (+)

33370332 .. 33376856

Gene Structure 6525 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002392

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2211 bp

ATGATTCTTGAACGATCACTCTGGGAGTGTTCTGTCCATAGGCCCCTTCTTTCGAGCCGAGGTTCTGGGCATGCTCATGTCCGGAAGACGCCTCTTTTTGTGAACTGGGCAAAATGGATTCTGAAGATTGCAATGGGGCTGCTTTTTACTTTATGGGTTGCTCTAATATTTGTGTACCCAGCAGAATTTGGGTCTGAACTATTCGAAAAATGGGTTGCAGCGACCAGTGGAACTGTTTTTGGGGTCACAGGAAGCACGTTCCTGCTATTCAGCGGTCCCATTATCATCATTGCACTCCTTTCTGTAGTATTTCTTATTATCTCCGGGGAAGAGGAGCTCCATGAGAAGAAGACTTCAAGTTATCCAAGTTTCCGCTTGTGGACATTTCCAGTTCTTGTGGATGGACCATTTGGTGTGGTTTCTGCTACTGAGGTTATTGGGATATTGCTTTTCATTGCGTTTGTTGTCTGGGCTGTCTGTTCTTATACTGTGCGTATCCTCAACTCCCTGTCTGCAGATAGCTTGACTTTCAAAGAGAAAAGTTTGTTGTTCATGAAAATTTTGGGGCTTCGTTTCGGCTTAATTGGCTTGTTTTGCTTCTCATTTTTGTTCCTGCCGGTCGCAAGGGGATCAGTTCTTCTTCGCCTCATAAATATCCCTTTTGAGCATGCTACGAAATATCATGTATGGCTGGGACATCTAACAATGCTGCTCTTCACTGTCCATGGCCTATTATACATCGTGGCATGGACGATTGAGGGTAGTCTCCTTCAGGCAATATTGTCGTGGAATGATATTGGTATTGCCATTCTTCCGGGAGTAATCAGCCTCCTTGCTGGTCTCTTGATGTGGGTTACGTCAATGCCTCCAGTGAGAAAGCTGAATTTTGAGTTATTCTTCTACACTCATCAGTTATATGTCATCTTTGTCGTCTTTTTGGCTTTGCACGTTGGTGATTTCCTTTTTGCATTTGCTGCTGGAGGCATATTTATTTTTCTTCTGGATCGTTTTCTACGATTCTGTCAATCACGAAGGGTTGTTGATATAATTTCAGCAAAGTGCCTTCCATGTGGAACTGTAGAACTGGTTGTCGCCAAACCTGAAAATCTGCGGTACAATGCCCTCAGTTTTGTTTTTCTTCAAGTTCGGGAGCTATCATGGCTGCAGTGGCATCCTTTCAGTGTGTCATCCAGTCCTATGGATGGTAAATATCATATATCTGTGCTCATAAAGGTTCTTGGGAAATGGACAGAAAAGCTAAGAGGAAATATCTTGAAAAGCTCTGAGGATGTGCCGTGCAGTCTTCCTACTAAATTAACAGCTTCTGTTGAAGGGCCTTATGGGCATGAGATTCCGTACCACATGATGTATGAAAATCTTATTTTAGTAGCCGGTGGCATTGGGATTTCCCCTTTCCTGGCCATCTTGAGTGACATTCTCCATTCTGTTCATCAAGGAAAGCCCTGTCTACCAAGAAATATCTTGATCGTATGGGCGGTCAAAAAATCAAATGAGCTTCCTCTTCTTTCAACCATTGACATGGAATCAACTTGTCCATCTTTCTACACTAAACTAAATCTTCAGACTCATATTTATGTCACTCGGGAATCTGAACCTCCATTGGAAGAGGGTCAAGTTGAAAGCAGCACTGTCGAGTCTTCTCTTTGTCCCATGTCCAAAGGGTGTGGTATGTCTGTTTTGGTTGGTACTGGACATAATATATGGTCTGGCCTATACGTTATCTCATCTACACTGGGCTTTGTTATCCTAATTGGTTTGTTGGATATCCTCTACATAAACCCATTTGATATATCCTCATGGTGGTATAAAGGGCTTCTTTTCGTAGCCTGTATGGTTTTAAGTGTTTTTATCTTTGGGGGTCTCGTGGTTTGTTTATGGCATCTCTGGGACAAAAGAATGTCAGCAAAGGAGCAAAGCAAGGAGGCAGAGCATAAAAAAACTGTAGCTCACAGTGATTTAGACGAGAGTAGTCCTGAAAACTTTACCAGAATTCATTATGGTGCAAGACCAGACTTCAATGAAATTTTTGGAACCGTATCAAGGGAATGGGGCCCTGTTGATATTGGTGTATTTGTTTGTGGTCCTCCATCTCTTCAATCAAGTGTTGCTAAAGAAATCAGGTCACACACTGTGAGGAGACAATCCATTGATCCTGTCTTCCATTTCAACAGCCATAGCTTTGACCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000293 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006091 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009767 GO:0009987 GO:0015979 GO:0016020 GO:0016491 GO:0016722 GO:0016723 GO:0019684 GO:0022900 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0055114 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

737

Amino Acids

82.51

Weight (kDa)

7.34

Isoelectric Point (pI)

47.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ferric_reduct	PF01794	192 - 313	5.9e-22	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	348 - 449	2.8e-20	FAD-binding domain
NAD_binding_6	PF08030	457 - 549	7.8e-11	Ferric reductase NAD binding domain
NAD_binding_6	PF08030	642 - 711	9.4e-08	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003400)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49730 AT5G49730 AT5G49740 AT5G49740 AT5G49740
fragaria_vesca	FvH4_5g27150 FvH4_5g27150 FvH4_5g27150 FvH4_5g27150 FvH4_5g27150
malus_domestica	MD08G1250800.v1.1 MD15G1140500.v1.1
prunus_persica	Prupe.1G587800_v2.0.a1 Prupe.1G587800_v2.0.a1
pyrus_communis	pycom08g21770 pycom15g12700
rosa_chinensis	RchiOBHm_Chr7g0218161 RchiOBHm_Chr7g0218171
rosa_laevigata	RLG00000002392
rosa_multiflora	Rmu_sc0003627.1_g000006 Rmu_sc0003627.1_g000007
rosa_roxburghii	Rroxscaffold_3G00241250 Rroxscaffold_3G00241260
rosa_rugosa	Rorug07G0174700 Rorug07G0174700 Rorug07G0174800
rosa_samantha	Rh7AG317100 Rh7AG317200 Rh7BG308300 Rh7BG315800 Rh7CG333900 Rh7CG334000 Rh7DG316000 Rh7DG316200
rosa_wichuraiana	Rw7G026830 Rw7G026840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1468
AccIII	TCCGGA	1 cut(s)	81
AciI	CCGC	4 cut(s)	273, 373, 1111, 1496
AclWI	GGATC	3 cut(s)	637, 1011, 2165
AcoI	YGGCCR	1 cut(s)	1419
AcsI	RAATTY	5 cut(s)	185, 558, 883, 2010, 2043
AcuI	CTGAAG	3 cut(s)	143, 755, 1565
AcyI	GRCGYC	1 cut(s)	89
AdeI	CACNNNGTG	1 cut(s)	2152
AfaI	GTAC	4 cut(s)	176, 1115, 1358, 1708
AfiI	CCNNNNNNNGG	4 cut(s)	1202, 1417, 1821, 2061
AjnI	CCWGG	1 cut(s)	1416
AleI	CACNNNNGTG	1 cut(s)	951
Alw21I	GWGCWC	2 cut(s)	339, 1227
Alw26I	GTCTC	4 cut(s)	770, 845, 1886, 2152
AlwI	GGATC	3 cut(s)	637, 1011, 2165
AlwNI	CAGNNNCTG	1 cut(s)	1325
Ama87I	CYCGRG	1 cut(s)	1602
Aor13HI	TCCGGA	1 cut(s)	81
AoxI	GGCC	6 cut(s)	41, 727, 1334, 1419, 1729, 2071
ApaI	GGGCCC	1 cut(s)	2075
ApeKI	GCWGC	6 cut(s)	139, 218, 709, 974, 1162, 1644
ApoI	RAATTY	5 cut(s)	185, 558, 883, 2010, 2043
AspS9I	GGNCC	7 cut(s)	42, 275, 404, 1334, 2071, 2072, 2102
AsuC2I	CCSGG	2 cut(s)	325, 816
AsuHPI	GGTGA	1 cut(s)	965
AsuII	TTCGAA	1 cut(s)	204
AvaI	CYCGRG	1 cut(s)	1602
AvaII	GGWCC	3 cut(s)	275, 404, 2102
BaeGI	GKGCMC	1 cut(s)	2075
BalI	TGGCCA	1 cut(s)	1421
BanII	GRGCYC	2 cut(s)	339, 2075
BauI	CACGAG	1 cut(s)	1883
BbsI	GAAGAC	5 cut(s)	92, 356, 1295, 1650, 2170
Bbv12I	GWGCWC	2 cut(s)	339, 1227
BbvI	GCAGC	6 cut(s)	126, 230, 696, 961, 1149, 1656
BccI	CCATC	5 cut(s)	395, 1196, 1430, 1564, 2116
BceAI	ACGGC	1 cut(s)	1279
BcgI	CGANNNNNNTGC	4 cut(s)	765, 799, 1633, 1667
BciT130I	CCWGG	1 cut(s)	1418
BciVI	GTATCC	1 cut(s)	506
BcnI	CCSGG	2 cut(s)	325, 816
BcoDI	GTCTC	4 cut(s)	770, 845, 1886, 2152
BfmI	CTRYAG	6 cut(s)	303, 513, 1077, 1163, 1962, 2207
BfuI	GTATCC	1 cut(s)	506
BglI	GCCNNNNNGGC	1 cut(s)	1342
BisI	GCNGC	6 cut(s)	140, 219, 710, 975, 1163, 1645
BlsI	GCNGC	6 cut(s)	141, 220, 711, 976, 1164, 1646
Bme1390I	CCNGG	3 cut(s)	325, 816, 1418
Bme18I	GGWCC	3 cut(s)	275, 404, 2102
BmeT110I	CYCGRG	1 cut(s)	1602
BmgT120I	GGNCC	7 cut(s)	42, 275, 404, 1334, 2071, 2072, 2102
BmiI	GGNNCC	5 cut(s)	44, 277, 2053, 2072, 2073
BmrFI	CCNGG	3 cut(s)	325, 816, 1418
BmrI	ACTGGG	2 cut(s)	115, 1763
BmsI	GCATC	2 cut(s)	1180, 1909
BmuI	ACTGGG	2 cut(s)	115, 1763
BpiI	GAAGAC	5 cut(s)	92, 356, 1295, 1650, 2170
BpmI	CTGGAG	2 cut(s)	852, 999
Bpu14I	TTCGAA	1 cut(s)	204
BpuEI	CTTGAG	1 cut(s)	1447
BpuMI	CCSGG	2 cut(s)	325, 816
BsaHI	GRCGYC	1 cut(s)	89
BsaI	GGTCTC	2 cut(s)	845, 1886
BsaJI	CCNNGG	3 cut(s)	58, 324, 724
BsaWI	WCCGGW	1 cut(s)	81
Bsc4I	CCNNNNNNNGG	4 cut(s)	1202, 1417, 1821, 2061
Bse118I	RCCGGY	2 cut(s)	616, 1391
Bse1I	ACTGG	8 cut(s)	110, 225, 389, 869, 1089, 1191, 1714, 1758
Bse3DI	GCAATG	3 cut(s)	138, 288, 453
BseAI	TCCGGA	1 cut(s)	81
BseBI	CCWGG	1 cut(s)	1418
BseDI	CCNNGG	3 cut(s)	58, 324, 724
BseGI	GGATG	5 cut(s)	406, 1171, 1187, 1207, 1294
BseLI	CCNNNNNNNGG	4 cut(s)	1202, 1417, 1821, 2061
BseMI	GCAATG	3 cut(s)	138, 288, 453
BseMII	CTCAG	3 cut(s)	420, 1138, 1275
BseNI	ACTGG	8 cut(s)	110, 225, 389, 869, 1089, 1191, 1714, 1758
BseRI	GAGGAG	2 cut(s)	347, 2170
BseSI	GKGCMC	1 cut(s)	2075
BseXI	GCAGC	6 cut(s)	126, 230, 696, 961, 1149, 1656
BseYI	CCCAGC	2 cut(s)	178, 691
BsgI	GTGCAG	1 cut(s)	1318
Bsh1285I	CGRYCG	1 cut(s)	621
BshFI	GGCC	6 cut(s)	43, 729, 1336, 1421, 1731, 2073
BsiEI	CGRYCG	1 cut(s)	621
BsiHKAI	GWGCWC	2 cut(s)	339, 1227
BsiHKCI	CYCGRG	1 cut(s)	1602
BsiSI	CCGG	5 cut(s)	82, 324, 617, 815, 1392
BslFI	GGGAC	4 cut(s)	261, 708, 1653, 1922
BslI	CCNNNNNNNGG	4 cut(s)	1202, 1417, 1821, 2061
BsmAI	GTCTC	4 cut(s)	770, 845, 1886, 2152
BsmFI	GGGAC	4 cut(s)	261, 708, 1653, 1922
BsnI	GGCC	6 cut(s)	43, 729, 1336, 1421, 1731, 2073
Bso31I	GGTCTC	2 cut(s)	845, 1886
BsoBI	CYCGRG	1 cut(s)	1602
Bsp119I	TTCGAA	1 cut(s)	204
Bsp120I	GGGCCC	1 cut(s)	2071
Bsp1286I	GDGCHC	3 cut(s)	339, 1227, 2075
Bsp13I	TCCGGA	1 cut(s)	81
Bsp143I	GATC	5 cut(s)	14, 629, 1003, 1485, 2170
Bsp19I	CCATGG	1 cut(s)	724
BspACI	CCGC	4 cut(s)	273, 373, 1111, 1496
BspANI	GGCC	6 cut(s)	43, 729, 1336, 1421, 1731, 2073
BspCNI	CTCAG	3 cut(s)	421, 1137, 1276
BspEI	TCCGGA	1 cut(s)	81
BspHI	TCATGA	1 cut(s)	552
BspLI	GGNNCC	5 cut(s)	44, 277, 2053, 2072, 2073
BspMAI	CTGCAG	2 cut(s)	517, 1167
BspPI	GGATC	3 cut(s)	637, 1011, 2165
BspQI	GCTCTTC	1 cut(s)	719
BspT104I	TTCGAA	1 cut(s)	204
BspTNI	GGTCTC	2 cut(s)	845, 1886
BsrDI	GCAATG	3 cut(s)	138, 288, 453
BsrFI	RCCGGY	2 cut(s)	616, 1391
BsrI	ACTGG	8 cut(s)	110, 225, 389, 869, 1089, 1191, 1714, 1758
BssAI	RCCGGY	2 cut(s)	616, 1391
BssECI	CCNNGG	3 cut(s)	58, 324, 724
BssMI	GATC	5 cut(s)	14, 629, 1003, 1485, 2170
BssNI	GRCGYC	1 cut(s)	89
BssSI	CACGAG	1 cut(s)	1883
BssT1I	CCWWGG	1 cut(s)	724
Bst2BI	CACGAG	1 cut(s)	1883
Bst2UI	CCWGG	1 cut(s)	1418
Bst4CI	ACNGT	9 cut(s)	235, 490, 721, 1078, 1651, 1963, 1973, 2056, 2152
Bst6I	CTCTTC	5 cut(s)	324, 719, 1527, 1620, 2118
BstACI	GRCGYC	1 cut(s)	89
BstAPI	GCANNNNNTGC	1 cut(s)	974
BstBI	TTCGAA	1 cut(s)	204
BstC8I	GCNNGC	2 cut(s)	72, 669
BstDEI	CTNAG	4 cut(s)	429, 1124, 1259, 1284
BstDSI	CCRYGG	1 cut(s)	724
BstF5I	GGATG	5 cut(s)	406, 1171, 1187, 1207, 1294
BstKTI	GATC	5 cut(s)	17, 632, 1006, 1488, 2173
BstMAI	GTCTC	4 cut(s)	770, 845, 1886, 2152
BstMBI	GATC	5 cut(s)	14, 629, 1003, 1485, 2170
BstMCI	CGRYCG	1 cut(s)	621
BstMWI	GCNNNNNNNGC	6 cut(s)	585, 594, 974, 1159, 1168, 1342
BstNI	CCWGG	1 cut(s)	1418
BstNSI	RCATGY	2 cut(s)	74, 671
BstSCI	CCNGG	3 cut(s)	323, 814, 1416
BstSFI	CTRYAG	6 cut(s)	303, 513, 1077, 1163, 1962, 2207
BstSLI	GKGCMC	1 cut(s)	2075
BstV1I	GCAGC	6 cut(s)	126, 230, 696, 961, 1149, 1656
BstV2I	GAAGAC	5 cut(s)	92, 356, 1295, 1650, 2170
BstXI	CCANNNNNNTGG	2 cut(s)	1198, 1540
BsuI	GTATCC	1 cut(s)	506
BsuRI	GGCC	6 cut(s)	43, 729, 1336, 1421, 1731, 2073
BtgI	CCRYGG	1 cut(s)	724
BtsCI	GGATG	5 cut(s)	406, 1171, 1187, 1207, 1294
BtsI	GCAGTG	1 cut(s)	1172
BtsIMutI	CAGTG	9 cut(s)	232, 717, 876, 1172, 1186, 1647, 1751, 1978, 2148
Cac8I	GCNNGC	2 cut(s)	72, 669
CaiI	CAGNNNCTG	1 cut(s)	1325
CciI	TCATGA	1 cut(s)	552
Cfr10I	RCCGGY	2 cut(s)	616, 1391
Cfr13I	GGNCC	7 cut(s)	42, 275, 404, 1334, 2071, 2072, 2102
CseI	GACGC	1 cut(s)	97
Csp6I	GTAC	4 cut(s)	175, 1114, 1357, 1707
CspCI	CAANNNNNGTGG	2 cut(s)	1666, 1701
CviQI	GTAC	4 cut(s)	175, 1114, 1357, 1707
DdeI	CTNAG	4 cut(s)	429, 1124, 1259, 1284
DpnI	GATC	5 cut(s)	16, 631, 1005, 1487, 2172
DpnII	GATC	5 cut(s)	14, 629, 1003, 1485, 2170
DraIII	CACNNNGTG	1 cut(s)	2152
EaeI	YGGCCR	1 cut(s)	1419
Eam1104I	CTCTTC	5 cut(s)	324, 719, 1527, 1620, 2118
EarI	CTCTTC	5 cut(s)	324, 719, 1527, 1620, 2118
Ecl136II	GAGCTC	1 cut(s)	337
Eco130I	CCWWGG	1 cut(s)	724
Eco24I	GRGCYC	2 cut(s)	339, 2075
Eco31I	GGTCTC	2 cut(s)	845, 1886
Eco32I	GATATC	1 cut(s)	1786
Eco47I	GGWCC	3 cut(s)	275, 404, 2102
Eco53kI	GAGCTC	1 cut(s)	337
Eco57I	CTGAAG	3 cut(s)	143, 755, 1565
Eco88I	CYCGRG	1 cut(s)	1602
EcoICRI	GAGCTC	1 cut(s)	337
EcoO109I	RGGNCCY	4 cut(s)	42, 1334, 2071, 2072
EcoRI	GAATTC	1 cut(s)	2010
EcoRII	CCWGG	1 cut(s)	1416
EcoRV	GATATC	1 cut(s)	1786
EcoT14I	CCWWGG	1 cut(s)	724
EcoT38I	GRGCYC	2 cut(s)	339, 2075
ErhI	CCWWGG	1 cut(s)	724
FalI	AAGNNNNNCTT	2 cut(s)	1821, 1853
FaqI	GGGAC	4 cut(s)	261, 708, 1653, 1922
FblI	GTMKAC	1 cut(s)	1468
Fnu4HI	GCNGC	6 cut(s)	140, 219, 710, 975, 1163, 1645
FokI	GGATG	5 cut(s)	413, 1158, 1174, 1214, 1301
FriOI	GRGCYC	2 cut(s)	339, 2075
Fsp4HI	GCNGC	6 cut(s)	140, 219, 710, 975, 1163, 1645
GluI	GCNGC	6 cut(s)	140, 219, 710, 975, 1163, 1645
GsaI	CCCAGC	2 cut(s)	182, 695
GsuI	CTGGAG	2 cut(s)	852, 999
HaeIII	GGCC	6 cut(s)	43, 729, 1336, 1421, 1731, 2073
HapII	CCGG	5 cut(s)	82, 324, 617, 815, 1392
HgaI	GACGC	1 cut(s)	97
Hin1I	GRCGYC	1 cut(s)	89
HinfI	GANTC	8 cut(s)	4, 118, 1017, 1351, 1544, 1585, 1607, 1655
HpaII	CCGG	5 cut(s)	82, 324, 617, 815, 1392
HphI	GGTGA	1 cut(s)	965
Hpy166II	GTNNAC	4 cut(s)	103, 175, 381, 1469
Hpy188I	TCNGA	5 cut(s)	123, 196, 1285, 1584, 1612
Hpy8I	GTNNAC	4 cut(s)	103, 175, 381, 1469
HpyAV	CCTTC	5 cut(s)	56, 779, 1026, 1073, 1325
HpyCH4III	ACNGT	9 cut(s)	235, 490, 721, 1078, 1651, 1963, 1973, 2056, 2152
HpyCH4IV	ACGT	4 cut(s)	257, 857, 948, 1737
HpyCH4V	TGCA	9 cut(s)	131, 218, 293, 515, 946, 968, 1165, 1299, 2024
HpyF10VI	GCNNNNNNNGC	6 cut(s)	585, 594, 974, 1159, 1168, 1342
HpyF3I	CTNAG	4 cut(s)	429, 1124, 1259, 1284
HpySE526I	ACGT	4 cut(s)	257, 857, 948, 1737
Hsp92I	GRCGYC	1 cut(s)	89
Kpn2I	TCCGGA	1 cut(s)	81
Kzo9I	GATC	5 cut(s)	14, 629, 1003, 1485, 2170
LguI	GCTCTTC	1 cut(s)	719
LmnI	GCTCC	4 cut(s)	334, 342, 1150, 1930
Lsp1109I	GCAGC	6 cut(s)	126, 230, 696, 961, 1149, 1656
LweI	GCATC	2 cut(s)	1180, 1909
MaeII	ACGT	4 cut(s)	257, 857, 948, 1737
MaeIII	GTNAC	5 cut(s)	244, 853, 1430, 1597, 2142
MalI	GATC	5 cut(s)	16, 631, 1005, 1487, 2172
MboI	GATC	5 cut(s)	14, 629, 1003, 1485, 2170
MhlI	GDGCHC	3 cut(s)	339, 1227, 2075
MlsI	TGGCCA	1 cut(s)	1421
MluCI	AATT	9 cut(s)	185, 558, 582, 883, 1047, 1313, 1770, 2010, 2043
MluNI	TGGCCA	1 cut(s)	1421
MlyI	GAGTC	2 cut(s)	1579, 1664
MmeI	TCCRAC	1 cut(s)	1761
Mox20I	TGGCCA	1 cut(s)	1421
MroI	TCCGGA	1 cut(s)	81
MscI	TGGCCA	1 cut(s)	1421
MseI	TTAA	3 cut(s)	581, 1316, 1859
MslI	CAYNNNNRTG	5 cut(s)	75, 951, 1538, 1593, 2019
Msp20I	TGGCCA	1 cut(s)	1421
MspA1I	CMGCKG	1 cut(s)	273
MspI	CCGG	5 cut(s)	82, 324, 617, 815, 1392
MspR9I	CCNGG	3 cut(s)	325, 816, 1418
MvaI	CCWGG	1 cut(s)	1418
MwoI	GCNNNNNNNGC	6 cut(s)	585, 594, 974, 1159, 1168, 1342
NciI	CCSGG	2 cut(s)	325, 816
NcoI	CCATGG	1 cut(s)	724
NdeII	GATC	5 cut(s)	14, 629, 1003, 1485, 2170
NlaIV	GGNNCC	5 cut(s)	44, 277, 2053, 2072, 2073
NmeAIII	GCCGAG	1 cut(s)	83
NmuCI	GTSAC	4 cut(s)	244, 1430, 1597, 2142
NspI	RCATGY	2 cut(s)	74, 671
NspV	TTCGAA	1 cut(s)	204
OliI	CACNNNNGTG	1 cut(s)	951
PaeI	GCATGC	2 cut(s)	74, 671
PagI	TCATGA	1 cut(s)	552
PciSI	GCTCTTC	1 cut(s)	719
PcsI	WCGNNNNNNNCGW	1 cut(s)	1012
PfeI	GAWTC	6 cut(s)	4, 118, 1017, 1351, 1544, 1607
PfoI	TCCNGGA	1 cut(s)	814
PkrI	GCNGC	6 cut(s)	141, 220, 711, 976, 1164, 1646
PleI	GAGTC	2 cut(s)	1579, 1663
PpsI	GAGTC	2 cut(s)	1579, 1663
Psp124BI	GAGCTC	1 cut(s)	339
Psp6I	CCWGG	1 cut(s)	1416
PspFI	CCCAGC	2 cut(s)	178, 691
PspGI	CCWGG	1 cut(s)	1416
PspN4I	GGNNCC	5 cut(s)	44, 277, 2053, 2072, 2073
PspOMI	GGGCCC	1 cut(s)	2071
PspPI	GGNCC	7 cut(s)	42, 275, 404, 1334, 2071, 2072, 2102
PstI	CTGCAG	2 cut(s)	517, 1167
PstNI	CAGNNNCTG	1 cut(s)	1325
RsaI	GTAC	4 cut(s)	176, 1115, 1358, 1708
RsaNI	GTAC	4 cut(s)	175, 1114, 1357, 1707
RseI	CAYNNNNRTG	5 cut(s)	75, 951, 1538, 1593, 2019
SacI	GAGCTC	1 cut(s)	339
SapI	GCTCTTC	1 cut(s)	719
SaqAI	TTAA	3 cut(s)	581, 1316, 1859
SatI	GCNGC	6 cut(s)	140, 219, 710, 975, 1163, 1645
Sau3AI	GATC	5 cut(s)	14, 629, 1003, 1485, 2170
Sau96I	GGNCC	7 cut(s)	42, 275, 404, 1334, 2071, 2072, 2102
SchI	GAGTC	2 cut(s)	1579, 1664
ScrFI	CCNGG	3 cut(s)	325, 816, 1418
SduI	GDGCHC	3 cut(s)	339, 1227, 2075
SfaNI	GCATC	2 cut(s)	1180, 1909
SfcI	CTRYAG	6 cut(s)	303, 513, 1077, 1163, 1962, 2207
SfuI	TTCGAA	1 cut(s)	204
SinI	GGWCC	3 cut(s)	275, 404, 2102
SmiMI	CAYNNNNRTG	5 cut(s)	75, 951, 1538, 1593, 2019
SmlI	CTYRAG	1 cut(s)	1426
SmoI	CTYRAG	1 cut(s)	1426
SphI	GCATGC	2 cut(s)	74, 671
Sse9I	AATT	9 cut(s)	185, 558, 582, 883, 1047, 1313, 1770, 2010, 2043
SsiI	CCGC	4 cut(s)	273, 373, 1111, 1496
SspI	AATATT	2 cut(s)	168, 780
SstI	GAGCTC	1 cut(s)	339
StyD4I	CCNGG	3 cut(s)	323, 814, 1416
StyI	CCWWGG	1 cut(s)	724
TaaI	ACNGT	9 cut(s)	235, 490, 721, 1078, 1651, 1963, 1973, 2056, 2152
TaiI	ACGT	4 cut(s)	260, 860, 951, 1740
TaqI	TCGA	3 cut(s)	53, 204, 1653
TasI	AATT	9 cut(s)	185, 558, 582, 883, 1047, 1313, 1770, 2010, 2043
TfiI	GAWTC	6 cut(s)	4, 118, 1017, 1351, 1544, 1607
Tru1I	TTAA	3 cut(s)	581, 1316, 1859
Tru9I	TTAA	3 cut(s)	581, 1316, 1859
TscAI	CASTG	9 cut(s)	232, 724, 876, 1172, 1186, 1654, 1758, 1978, 2155
TseFI	GTSAC	4 cut(s)	244, 1430, 1597, 2142
TseI	GCWGC	6 cut(s)	139, 218, 709, 974, 1162, 1644
Tsp45I	GTSAC	4 cut(s)	244, 1430, 1597, 2142
TspDTI	ATGAA	7 cut(s)	442, 541, 569, 1386, 1439, 2003, 2055
TspGWI	ACGGA	1 cut(s)	1344
TspRI	CASTG	9 cut(s)	232, 724, 876, 1172, 1186, 1654, 1758, 1978, 2155
VpaK11BI	GGWCC	3 cut(s)	275, 404, 2102
XapI	RAATTY	5 cut(s)	185, 558, 883, 2010, 2043
XceI	RCATGY	2 cut(s)	74, 671
XmiI	GTMKAC	1 cut(s)	1468

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.