Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0003400

Physical Location & Seq

Genomic Coordinates Forward (+)

33353856 .. 33359527

Gene Structure 5672 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00241250.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2181 bp

ATGGATAAAAGTTCTGTCCATAGGCCCCTTCTTTCGAGCCGAGGTTCTGGCCATACTTATGTCCGGAAGACGCCTCTTTTTGTGAACTTGGCAAAATGGATTCTGAAGATTGCAATGGGGCTGCTTTTCACTTTATGGGTTGCTCTAATATTTGTGTTCCCAGCAGAATTTGGGACTGAACTATACGAAAAATGGGTTGCAGCGACCAGGGGAACTGTTTTTGGGGTTACAGGAAGCACGTTCCTGCTATTCAGCGGTCCCATTATCATCATTGCACTCCTTTCTGTAGTGTTTCTCATTATCTCCGGGGAAGAGGAGCTCCATGAGAAGAAGACTTCAAGGTATCCAAGTTTCCGCTTGTGGACATTTCCAGTTCTTGTGGATGGACCATTTGGTGTGGTTTCTGCTACTGAGGTTATTGGGATATTGCTTTTCATTGCGTTTGTTGTCTGGGCTGTCTGTTCTTATACTGTGCGTATCCTCAACTCCCTGTCTGCTGATAGCTCGACTTTCAAAGAGAATAGTTTGTTGTTCATGGAAATTTTGGGACTTCGTTTCGGCTTAATTGGCTTGTTTTGCTTCTCATTTTTGTTCCTGCCGGTCGCAAGGGGATCAGTTCTTCTTCGCCTCATAAATATCCCTTTTGAGCATGCTACGAAATATCATGTATGGCTGGGACATCTAACAATGCTGCTCTTCACCGTCCATGGCCTATTATACGTAGTGGCATGGACGATTGAGGGTAATCTCCTTCAGGAAATATTCTCATGGGCTGATATTGGTATTGCCATTCTTCCGGGAGTAATCAGCCTCCTTGCTGGTCTCTTGATGTGGGTAACATCAATGCCTCCAGTGAGAAAGCTGAATTTTGAGTTATTCTTCTACACTCATCAGTTATATGTCATTTTTTTCGTCTTTTTGGCTTTGCACGTTGGTGATTTCCTTTTTGCATTTGCTGCTGGAGGCATATTTATTTTTCTTCTGGATCGTTTTCTAAGATTCTGTCAATCACGAAGGATTGTTGATATAATTTCAGCAAAGTGCCTTCCTTGTGGAACTGTAGAACTGGTTGTCGCCAAACCTGAAAATCTGCGGTACAATGCCCTCAGTTTTGTTTTTCTTCAAGTTCGGGAGCTATCATGGCTGCAGTGGCATCCTTTCAGTGTATCATCCAGTCCTATGGATGGTAAATATCATATATCTGTGCTCATAAAGGTTCTTGGGAAATGGACAGAAAAGCTAAGAGGAAATATCTTGAAAAGCTCTGAGGATGTGCCTCCTACTAAGTTAACAGCTTCTGTTGAAGGGCCTTATGGGCATGAGATACCGTACCACATGATGTATGAAAATCTTATTTTAGTAGCTGGTGGCATTGGGATTTCCCCTTTCCTGGCCATCTTGAGTGACATTCTCCATTCTGTTCATCAAGGAAAGCCCTGTCTACCGAGAAATATCTTGATCGTATGGGCGGTCAAAAAATCAAATGAGCTTCCTCTTCTTTCAACCATTGACATGGAATCAACTTGTCCATCTTTCTCTAATAAACTAAATCTTCAGACTCATATTTATGTCACTCGGGAGTCTGAACCTCCACTGGAAGAGGGTCAAGTTGAGAGCAATGTCGAGTCTTCTCTTTGTCCCATGTCCAAAGGGTGTGGTATGTCTGTTTTGGTTGGTACTGGACATAATATATGGTCTGGCCTATACGTTATCTCATCTACACTGGGCTTTGTTATCCTAATTGGTTTGTTGGATATCCTCTACATAAACCCATTTGATATAACCACATGGTGGTACAAAGGGCTTCTTCTCGTAGTCTGTATGGTTGCAAGTGTTTTTATCTTTGGGGGTCTCGTGGTTGGTTTATGGCATCTCTGGGACATAAGAATGTCAGCAAAGGAGCAAAGGAAGGAGGCAGAGCATATAAAAGCTGTAGCTCACAATGATTTAGACGAGAGAAGTCCTGCAAACTTTACCAGCATTAATTATGGTGCAAGACCAGACTTCAATGAAATTTTTGGAACCGTATCAAGGGAATGGGGCCCTGTTAATGTTGGTGTATTTGTTTGTGGTCCTCCATCTCTTCAATCAAGTGTTGCTAAAGAAATCAGGTCACATACTCTGAGGAGACAATCCATTGATCCTGTCTTCCATTTCAACAGCCATAGCTTTGACCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000293 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006091 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009767 GO:0009987 GO:0015979 GO:0016020 GO:0016491 GO:0016722 GO:0016723 GO:0019684 GO:0022900 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0055114 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

726

Amino Acids

81.38

Weight (kDa)

7.34

Isoelectric Point (pI)

44.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ferric_reduct	PF01794	186 - 307	1.5e-22	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	342 - 440	1.1e-19	FAD-binding domain
NAD_binding_6	PF08030	448 - 701	7e-20	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003400)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49730 AT5G49730 AT5G49740 AT5G49740 AT5G49740
fragaria_vesca	FvH4_5g27150 FvH4_5g27150 FvH4_5g27150 FvH4_5g27150 FvH4_5g27150
malus_domestica	MD08G1250800.v1.1 MD15G1140500.v1.1
prunus_persica	Prupe.1G587800_v2.0.a1 Prupe.1G587800_v2.0.a1
pyrus_communis	pycom08g21770 pycom15g12700
rosa_chinensis	RchiOBHm_Chr7g0218161 RchiOBHm_Chr7g0218171
rosa_laevigata	RLG00000002392
rosa_multiflora	Rmu_sc0003627.1_g000006 Rmu_sc0003627.1_g000007
rosa_roxburghii	Rroxscaffold_3G00241250 Rroxscaffold_3G00241260
rosa_rugosa	Rorug07G0174700 Rorug07G0174700 Rorug07G0174800
rosa_samantha	Rh7AG317100 Rh7AG317200 Rh7BG308300 Rh7BG315800 Rh7CG333900 Rh7CG334000 Rh7DG316000 Rh7DG316200
rosa_wichuraiana	Rw7G026830 Rw7G026840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1791
AccI	GTMKAC	1 cut(s)	1441
AccIII	TCCGGA	1 cut(s)	63
AciI	CCGC	4 cut(s)	255, 355, 1093, 1469
AclWI	GGATC	3 cut(s)	619, 993, 2135
AcoI	YGGCCR	2 cut(s)	49, 1392
AcsI	RAATTY	4 cut(s)	167, 540, 865, 2013
AcuI	CTGAAG	3 cut(s)	125, 737, 1538
AcyI	GRCGYC	1 cut(s)	71
AdeI	CACNNNGTG	1 cut(s)	1791
AfaI	GTAC	4 cut(s)	1097, 1331, 1678, 1796
AfiI	CCNNNNNNNGG	4 cut(s)	1184, 1390, 1791, 2031
AgsI	TTSAA	9 cut(s)	339, 514, 1124, 1258, 1304, 1503, 2008, 2087, 2158
AjnI	CCWGG	2 cut(s)	206, 1389
AleI	CACNNNNGTG	1 cut(s)	933
Alw21I	GWGCWC	2 cut(s)	321, 1209
Alw26I	GTCTC	3 cut(s)	827, 1856, 2122
AlwI	GGATC	3 cut(s)	619, 993, 2135
AlwNI	CAGNNNCTG	1 cut(s)	1298
Ama87I	CYCGRG	1 cut(s)	1575
Aor13HI	TCCGGA	1 cut(s)	63
AoxI	GGCC	7 cut(s)	23, 49, 709, 1307, 1392, 1699, 2041
ApaI	GGGCCC	1 cut(s)	2045
ApeKI	GCWGC	5 cut(s)	121, 200, 691, 956, 1144
ApoI	RAATTY	4 cut(s)	167, 540, 865, 2013
AseI	ATTAAT	1 cut(s)	1983
AspS9I	GGNCC	7 cut(s)	24, 257, 386, 1307, 2041, 2042, 2072
AsuC2I	CCSGG	2 cut(s)	307, 798
AsuHPI	GGTGA	2 cut(s)	691, 947
AvaI	CYCGRG	1 cut(s)	1575
AvaII	GGWCC	3 cut(s)	257, 386, 2072
BaeGI	GKGCMC	1 cut(s)	2045
BalI	TGGCCA	2 cut(s)	51, 1394
BanII	GRGCYC	2 cut(s)	321, 2045
BauI	CACGAG	1 cut(s)	1853
BbsI	GAAGAC	4 cut(s)	74, 338, 1620, 2140
Bbv12I	GWGCWC	2 cut(s)	321, 1209
BbvI	GCAGC	5 cut(s)	108, 212, 678, 943, 1131
BccI	CCATC	5 cut(s)	377, 1178, 1403, 1537, 2086
BciT130I	CCWGG	2 cut(s)	208, 1391
BciVI	GTATCC	2 cut(s)	354, 488
BcnI	CCSGG	2 cut(s)	307, 798
BcoDI	GTCTC	3 cut(s)	827, 1856, 2122
BfmI	CTRYAG	5 cut(s)	285, 1059, 1145, 1932, 2177
BfuI	GTATCC	2 cut(s)	354, 488
BglI	GCCNNNNNGGC	1 cut(s)	1315
BisI	GCNGC	5 cut(s)	122, 201, 692, 957, 1145
BlsI	GCNGC	5 cut(s)	123, 202, 693, 958, 1146
Bme1390I	CCNGG	4 cut(s)	208, 307, 798, 1391
Bme18I	GGWCC	3 cut(s)	257, 386, 2072
BmeT110I	CYCGRG	1 cut(s)	1575
BmgT120I	GGNCC	7 cut(s)	24, 257, 386, 1307, 2041, 2042, 2072
BmiI	GGNNCC	5 cut(s)	26, 259, 2023, 2042, 2043
BmrFI	CCNGG	4 cut(s)	208, 307, 798, 1391
BmrI	ACTGGG	1 cut(s)	1733
BmsI	GCATC	2 cut(s)	1162, 1879
BmuI	ACTGGG	1 cut(s)	1733
BpiI	GAAGAC	4 cut(s)	74, 338, 1620, 2140
BpmI	CTGGAG	2 cut(s)	834, 981
BpuEI	CTTGAG	1 cut(s)	1420
BpuMI	CCSGG	2 cut(s)	307, 798
BsaAI	YACGTR	1 cut(s)	721
BsaHI	GRCGYC	1 cut(s)	71
BsaI	GGTCTC	2 cut(s)	827, 1856
BsaJI	CCNNGG	4 cut(s)	40, 207, 306, 706
BsaWI	WCCGGW	1 cut(s)	63
Bsc4I	CCNNNNNNNGG	4 cut(s)	1184, 1390, 1791, 2031
Bse118I	RCCGGY	1 cut(s)	598
Bse1I	ACTGG	7 cut(s)	371, 851, 1071, 1173, 1599, 1684, 1728
Bse3DI	GCAATG	4 cut(s)	120, 270, 435, 1624
BseAI	TCCGGA	1 cut(s)	63
BseBI	CCWGG	2 cut(s)	208, 1391
BseDI	CCNNGG	4 cut(s)	40, 207, 306, 706
BseGI	GGATG	5 cut(s)	388, 1153, 1169, 1189, 1276
BseLI	CCNNNNNNNGG	4 cut(s)	1184, 1390, 1791, 2031
BseMI	GCAATG	4 cut(s)	120, 270, 435, 1624
BseMII	CTCAG	4 cut(s)	402, 1120, 1257, 2114
BseNI	ACTGG	7 cut(s)	371, 851, 1071, 1173, 1599, 1684, 1728
BseRI	GAGGAG	2 cut(s)	329, 2140
BseSI	GKGCMC	1 cut(s)	2045
BseXI	GCAGC	5 cut(s)	108, 212, 678, 943, 1131
BseYI	CCCAGC	2 cut(s)	160, 673
Bsh1285I	CGRYCG	1 cut(s)	603
BshFI	GGCC	7 cut(s)	25, 51, 711, 1309, 1394, 1701, 2043
BsiEI	CGRYCG	1 cut(s)	603
BsiHKAI	GWGCWC	2 cut(s)	321, 1209
BsiHKCI	CYCGRG	1 cut(s)	1575
BsiSI	CCGG	4 cut(s)	64, 306, 599, 797
BslFI	GGGAC	6 cut(s)	187, 243, 561, 690, 1623, 1892
BslI	CCNNNNNNNGG	4 cut(s)	1184, 1390, 1791, 2031
BsmAI	GTCTC	3 cut(s)	827, 1856, 2122
BsmFI	GGGAC	6 cut(s)	187, 243, 561, 690, 1623, 1892
BsnI	GGCC	7 cut(s)	25, 51, 711, 1309, 1394, 1701, 2043
Bso31I	GGTCTC	2 cut(s)	827, 1856
BsoBI	CYCGRG	1 cut(s)	1575
Bsp120I	GGGCCC	1 cut(s)	2041
Bsp1286I	GDGCHC	3 cut(s)	321, 1209, 2045
Bsp13I	TCCGGA	1 cut(s)	63
Bsp143I	GATC	4 cut(s)	611, 985, 1458, 2140
Bsp19I	CCATGG	1 cut(s)	706
BspACI	CCGC	4 cut(s)	255, 355, 1093, 1469
BspANI	GGCC	7 cut(s)	25, 51, 711, 1309, 1394, 1701, 2043
BspCNI	CTCAG	4 cut(s)	403, 1119, 1258, 2115
BspEI	TCCGGA	1 cut(s)	63
BspLI	GGNNCC	5 cut(s)	26, 259, 2023, 2042, 2043
BspMAI	CTGCAG	1 cut(s)	1149
BspPI	GGATC	3 cut(s)	619, 993, 2135
BspQI	GCTCTTC	1 cut(s)	701
BspTNI	GGTCTC	2 cut(s)	827, 1856
BsrDI	GCAATG	4 cut(s)	120, 270, 435, 1624
BsrFI	RCCGGY	1 cut(s)	598
BsrI	ACTGG	7 cut(s)	371, 851, 1071, 1173, 1599, 1684, 1728
BssAI	RCCGGY	1 cut(s)	598
BssECI	CCNNGG	4 cut(s)	40, 207, 306, 706
BssMI	GATC	4 cut(s)	611, 985, 1458, 2140
BssNI	GRCGYC	1 cut(s)	71
BssSI	CACGAG	1 cut(s)	1853
BssT1I	CCWWGG	1 cut(s)	706
Bst2BI	CACGAG	1 cut(s)	1853
Bst2UI	CCWGG	2 cut(s)	208, 1391
Bst4CI	ACNGT	6 cut(s)	217, 472, 703, 1060, 1329, 2026
Bst6I	CTCTTC	5 cut(s)	306, 701, 1500, 1593, 2088
BstACI	GRCGYC	1 cut(s)	71
BstAPI	GCANNNNNTGC	1 cut(s)	956
BstBAI	YACGTR	1 cut(s)	721
BstC8I	GCNNGC	1 cut(s)	651
BstDEI	CTNAG	7 cut(s)	411, 995, 1106, 1241, 1266, 1284, 2123
BstDSI	CCRYGG	1 cut(s)	706
BstF5I	GGATG	5 cut(s)	388, 1153, 1169, 1189, 1276
BstKTI	GATC	4 cut(s)	614, 988, 1461, 2143
BstMAI	GTCTC	3 cut(s)	827, 1856, 2122
BstMBI	GATC	4 cut(s)	611, 985, 1458, 2140
BstMCI	CGRYCG	1 cut(s)	603
BstMWI	GCNNNNNNNGC	6 cut(s)	567, 576, 956, 1141, 1150, 1315
BstNI	CCWGG	2 cut(s)	208, 1391
BstNSI	RCATGY	1 cut(s)	653
BstSCI	CCNGG	4 cut(s)	206, 305, 796, 1389
BstSFI	CTRYAG	5 cut(s)	285, 1059, 1145, 1932, 2177
BstSLI	GKGCMC	1 cut(s)	2045
BstSNI	TACGTA	1 cut(s)	721
BstV1I	GCAGC	5 cut(s)	108, 212, 678, 943, 1131
BstV2I	GAAGAC	4 cut(s)	74, 338, 1620, 2140
BstXI	CCANNNNNNTGG	2 cut(s)	1180, 1513
BsuI	GTATCC	2 cut(s)	354, 488
BsuRI	GGCC	7 cut(s)	25, 51, 711, 1309, 1394, 1701, 2043
BtgI	CCRYGG	1 cut(s)	706
BtsCI	GGATG	5 cut(s)	388, 1153, 1169, 1189, 1276
BtsI	GCAGTG	1 cut(s)	1154
BtsIMutI	CAGTG	5 cut(s)	858, 1154, 1168, 1592, 1721
Cac8I	GCNNGC	1 cut(s)	651
CaiI	CAGNNNCTG	1 cut(s)	1298
Cfr10I	RCCGGY	1 cut(s)	598
Cfr13I	GGNCC	7 cut(s)	24, 257, 386, 1307, 2041, 2042, 2072
CseI	GACGC	1 cut(s)	79
Csp6I	GTAC	4 cut(s)	1096, 1330, 1677, 1795
CspCI	CAANNNNNGTGG	2 cut(s)	1636, 1671
CviQI	GTAC	4 cut(s)	1096, 1330, 1677, 1795
DdeI	CTNAG	7 cut(s)	411, 995, 1106, 1241, 1266, 1284, 2123
DpnI	GATC	4 cut(s)	613, 987, 1460, 2142
DpnII	GATC	4 cut(s)	611, 985, 1458, 2140
DraIII	CACNNNGTG	1 cut(s)	1791
EaeI	YGGCCR	2 cut(s)	49, 1392
Eam1104I	CTCTTC	5 cut(s)	306, 701, 1500, 1593, 2088
EarI	CTCTTC	5 cut(s)	306, 701, 1500, 1593, 2088
Ecl136II	GAGCTC	1 cut(s)	319
Eco105I	TACGTA	1 cut(s)	721
Eco130I	CCWWGG	1 cut(s)	706
Eco24I	GRGCYC	2 cut(s)	321, 2045
Eco31I	GGTCTC	2 cut(s)	827, 1856
Eco32I	GATATC	1 cut(s)	1756
Eco47I	GGWCC	3 cut(s)	257, 386, 2072
Eco53kI	GAGCTC	1 cut(s)	319
Eco57I	CTGAAG	3 cut(s)	125, 737, 1538
Eco88I	CYCGRG	1 cut(s)	1575
EcoICRI	GAGCTC	1 cut(s)	319
EcoO109I	RGGNCCY	4 cut(s)	24, 1307, 2041, 2042
EcoRII	CCWGG	2 cut(s)	206, 1389
EcoRV	GATATC	1 cut(s)	1756
EcoT14I	CCWWGG	1 cut(s)	706
EcoT38I	GRGCYC	2 cut(s)	321, 2045
ErhI	CCWWGG	1 cut(s)	706
FalI	AAGNNNNNCTT	2 cut(s)	1791, 1823
FaqI	GGGAC	6 cut(s)	187, 243, 561, 690, 1623, 1892
FblI	GTMKAC	1 cut(s)	1441
Fnu4HI	GCNGC	5 cut(s)	122, 201, 692, 957, 1145
FokI	GGATG	5 cut(s)	395, 1140, 1156, 1196, 1283
FriOI	GRGCYC	2 cut(s)	321, 2045
Fsp4HI	GCNGC	5 cut(s)	122, 201, 692, 957, 1145
GluI	GCNGC	5 cut(s)	122, 201, 692, 957, 1145
GsaI	CCCAGC	2 cut(s)	164, 677
GsuI	CTGGAG	2 cut(s)	834, 981
HaeIII	GGCC	7 cut(s)	25, 51, 711, 1309, 1394, 1701, 2043
HapII	CCGG	4 cut(s)	64, 306, 599, 797
HgaI	GACGC	1 cut(s)	79
Hin1I	GRCGYC	1 cut(s)	71
HincII	GTYRAC	1 cut(s)	1290
HindII	GTYRAC	1 cut(s)	1290
HinfI	GANTC	6 cut(s)	100, 999, 1517, 1558, 1580, 1625
HpaI	GTTAAC	1 cut(s)	1290
HpaII	CCGG	4 cut(s)	64, 306, 599, 797
HphI	GGTGA	2 cut(s)	691, 947
Hpy166II	GTNNAC	4 cut(s)	85, 363, 1290, 1442
Hpy188I	TCNGA	5 cut(s)	105, 1267, 1557, 1585, 2124
Hpy8I	GTNNAC	4 cut(s)	85, 363, 1290, 1442
HpyAV	CCTTC	6 cut(s)	38, 761, 1008, 1055, 1298, 1903
HpyCH4III	ACNGT	6 cut(s)	217, 472, 703, 1060, 1329, 2026
HpyCH4IV	ACGT	4 cut(s)	239, 720, 930, 1707
HpyCH4V	TGCA	9 cut(s)	113, 200, 275, 928, 950, 1147, 1829, 1967, 1994
HpyF10VI	GCNNNNNNNGC	6 cut(s)	567, 576, 956, 1141, 1150, 1315
HpyF3I	CTNAG	7 cut(s)	411, 995, 1106, 1241, 1266, 1284, 2123
HpySE526I	ACGT	4 cut(s)	239, 720, 930, 1707
Hsp92I	GRCGYC	1 cut(s)	71
Kpn2I	TCCGGA	1 cut(s)	63
KspAI	GTTAAC	1 cut(s)	1290
Kzo9I	GATC	4 cut(s)	611, 985, 1458, 2140
LguI	GCTCTTC	1 cut(s)	701
LmnI	GCTCC	4 cut(s)	316, 324, 1132, 1900
Lsp1109I	GCAGC	5 cut(s)	108, 212, 678, 943, 1131
LweI	GCATC	2 cut(s)	1162, 1879
MaeII	ACGT	4 cut(s)	239, 720, 930, 1707
MaeIII	GTNAC	5 cut(s)	226, 835, 1403, 1570, 2112
MalI	GATC	4 cut(s)	613, 987, 1460, 2142
MboI	GATC	4 cut(s)	611, 985, 1458, 2140
MhlI	GDGCHC	3 cut(s)	321, 1209, 2045
MlsI	TGGCCA	2 cut(s)	51, 1394
MluCI	AATT	8 cut(s)	167, 540, 564, 865, 1029, 1740, 1984, 2013
MluNI	TGGCCA	2 cut(s)	51, 1394
MlyI	GAGTC	3 cut(s)	1552, 1589, 1634
MmeI	TCCRAC	1 cut(s)	1731
Mox20I	TGGCCA	2 cut(s)	51, 1394
MroI	TCCGGA	1 cut(s)	63
MscI	TGGCCA	2 cut(s)	51, 1394
MseI	TTAA	4 cut(s)	563, 1289, 1983, 2049
MslI	CAYNNNNRTG	5 cut(s)	57, 933, 1511, 1566, 1886
Msp20I	TGGCCA	2 cut(s)	51, 1394
MspA1I	CMGCKG	1 cut(s)	255
MspI	CCGG	4 cut(s)	64, 306, 599, 797
MspR9I	CCNGG	4 cut(s)	208, 307, 798, 1391
MvaI	CCWGG	2 cut(s)	208, 1391
MwoI	GCNNNNNNNGC	6 cut(s)	567, 576, 956, 1141, 1150, 1315
NciI	CCSGG	2 cut(s)	307, 798
NcoI	CCATGG	1 cut(s)	706
NdeII	GATC	4 cut(s)	611, 985, 1458, 2140
NlaIV	GGNNCC	5 cut(s)	26, 259, 2023, 2042, 2043
NmeAIII	GCCGAG	1 cut(s)	65
NmuCI	GTSAC	3 cut(s)	1403, 1570, 2112
NspI	RCATGY	1 cut(s)	653
OliI	CACNNNNGTG	1 cut(s)	933
PaeI	GCATGC	1 cut(s)	653
PciSI	GCTCTTC	1 cut(s)	701
PfeI	GAWTC	3 cut(s)	100, 999, 1517
PflMI	CCANNNNNTGG	1 cut(s)	1791
PfoI	TCCNGGA	1 cut(s)	796
PkrI	GCNGC	5 cut(s)	123, 202, 693, 958, 1146
PleI	GAGTC	3 cut(s)	1552, 1588, 1633
PpsI	GAGTC	3 cut(s)	1552, 1588, 1633
Ppu21I	YACGTR	1 cut(s)	721
PshBI	ATTAAT	1 cut(s)	1983
Psp124BI	GAGCTC	1 cut(s)	321
Psp6I	CCWGG	2 cut(s)	206, 1389
PspFI	CCCAGC	2 cut(s)	160, 673
PspGI	CCWGG	2 cut(s)	206, 1389
PspN4I	GGNNCC	5 cut(s)	26, 259, 2023, 2042, 2043
PspOMI	GGGCCC	1 cut(s)	2041
PspPI	GGNCC	7 cut(s)	24, 257, 386, 1307, 2041, 2042, 2072
PstI	CTGCAG	1 cut(s)	1149
PstNI	CAGNNNCTG	1 cut(s)	1298
RsaI	GTAC	4 cut(s)	1097, 1331, 1678, 1796
RsaNI	GTAC	4 cut(s)	1096, 1330, 1677, 1795
RseI	CAYNNNNRTG	5 cut(s)	57, 933, 1511, 1566, 1886
SacI	GAGCTC	1 cut(s)	321
SapI	GCTCTTC	1 cut(s)	701
SaqAI	TTAA	4 cut(s)	563, 1289, 1983, 2049
SatI	GCNGC	5 cut(s)	122, 201, 692, 957, 1145
Sau3AI	GATC	4 cut(s)	611, 985, 1458, 2140
Sau96I	GGNCC	7 cut(s)	24, 257, 386, 1307, 2041, 2042, 2072
SchI	GAGTC	3 cut(s)	1552, 1589, 1634
ScrFI	CCNGG	4 cut(s)	208, 307, 798, 1391
SduI	GDGCHC	3 cut(s)	321, 1209, 2045
SfaNI	GCATC	2 cut(s)	1162, 1879
SfcI	CTRYAG	5 cut(s)	285, 1059, 1145, 1932, 2177
SinI	GGWCC	3 cut(s)	257, 386, 2072
SmiMI	CAYNNNNRTG	5 cut(s)	57, 933, 1511, 1566, 1886
SmlI	CTYRAG	1 cut(s)	1399
SmoI	CTYRAG	1 cut(s)	1399
SnaBI	TACGTA	1 cut(s)	721
SphI	GCATGC	1 cut(s)	653
Sse9I	AATT	8 cut(s)	167, 540, 564, 865, 1029, 1740, 1984, 2013
SsiI	CCGC	4 cut(s)	255, 355, 1093, 1469
SspI	AATATT	2 cut(s)	150, 762
SstI	GAGCTC	1 cut(s)	321
StyD4I	CCNGG	4 cut(s)	206, 305, 796, 1389
StyI	CCWWGG	1 cut(s)	706
TaaI	ACNGT	6 cut(s)	217, 472, 703, 1060, 1329, 2026
TaiI	ACGT	4 cut(s)	242, 723, 933, 1710
TaqI	TCGA	3 cut(s)	35, 506, 1623
TasI	AATT	8 cut(s)	167, 540, 564, 865, 1029, 1740, 1984, 2013
TfiI	GAWTC	3 cut(s)	100, 999, 1517
Tru1I	TTAA	4 cut(s)	563, 1289, 1983, 2049
Tru9I	TTAA	4 cut(s)	563, 1289, 1983, 2049
TscAI	CASTG	5 cut(s)	858, 1154, 1168, 1599, 1728
TseFI	GTSAC	3 cut(s)	1403, 1570, 2112
TseI	GCWGC	5 cut(s)	121, 200, 691, 956, 1144
Tsp45I	GTSAC	3 cut(s)	1403, 1570, 2112
TspDTI	ATGAA	5 cut(s)	424, 523, 1359, 1412, 2025
TspRI	CASTG	5 cut(s)	858, 1154, 1168, 1599, 1728
Van91I	CCANNNNNTGG	1 cut(s)	1791
VpaK11BI	GGWCC	3 cut(s)	257, 386, 2072
VspI	ATTAAT	1 cut(s)	1983
XapI	RAATTY	4 cut(s)	167, 540, 865, 2013
XceI	RCATGY	1 cut(s)	653
XmiI	GTMKAC	1 cut(s)	1441

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.