Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0003400

Physical Location & Seq

Genomic Coordinates Reverse (-)

35633703 .. 35638958

Gene Structure 5256 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG317100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2328 bp

ATGGCCAATGGTGAATCAGAAATACTCTCTGCTCGTCTATATCAGCCGCTTCTTTCCAACTCCGCTGCCGACGTAGCTCCTTGTTCAAATGGCGGGAACAAGAACCGCTTCTTTTTGTCATTGTCGAAATGGGTTCTCAAATTTACAATGTGGTTAATTTTCATTGCATGGGTTGCTCTCTTTTTATTAGTACCTACGGATCTTGGGACTACTCTATCTAATGATTGGCTTGCTGCTACTGGTGGAACTCTATTTGGAGACAGTGGGAGTGTATTGCTGTTATTCAGCGGTCCAATTTTGGCTATTGCTTTACTTGCTTTTCCATATATCATTATTGTTGGGGAAGAAGAACAACAGCTTCAAGAGTATGCATGCAATACTCTTAAAGACCGGAATTGTACGGCGCCTATCTTGTGTTCGTTAAAAAGCACATTAATCTACTACAGGAAGAAGAAGCCCCCTCGATTCAACTTATGGACCTTTCCTGTTCTGGTGGATGGACCATTTGGAGTTGTCTCTGCTGCCGAATTGATCGGCATTATTCTCTTTATTGTATTTGTTCTCTGGGATCTGTATGCATTCACAGCAGTGAACTTTGGGCTGTTAGCCACCTACGATGATTTGAGCCTTGGAGAAACAAGATTAATGTTTCTGCACAATTTGGCGCGTAATCTTGGACAGATTGGCTTGGTTTGCTTGACATTTTTGTTCCTGCCGGTTGCAAGGGGATCAGTTCTATTTCGCCTTATAAATATTCCTTTTGAGCATGCTACGAGGTATCATGTGTGGCTGGGAAATCTCGCAATGCTGCTCTTTGCTATCCACGGCCTGTTATATGTATTGATATGGACAATTAAGGGTTGTGTCCTTAGTCAAATATTGGAGTGGAAGGATACTGGTGTTGCCAATCTTGCAGGATCAATTAGCCTTAGTGTTGGTCTGTTGATGTGGATCACAACACTTCCTCCGGCCAGAAAGCGGAATTTCGAGTTGTTCTTCTACACTCATCAGCTATACGTCATCTTCGTGGTCTTTTTGGCTTTGCACATTGGTTATCTCGTTTTTCCTACAGCTGCAGGCCCCATATTTATTTTTGTTCTTGATCGTTTTCTGAGGTTCTGTCAATCACGAAAGAGTGTTGATATAATTTCAGCCAAGTGCCTTCCATGTGGAACTGTAGAGTTGGTCCTCGCAAAACCCGAAAGTTTGCGGTACAACGCCCTCAGTTTTGTCTTTGTTCGAATTTGGGAGCTATCAAGGCTGCAATGGCATCCTTTCAGTGTTTCGTCCAGTCCTATGGATGGTAAACATCATATATCTGTTTTGATAAAGGCTATTGGGAAATGGACTGAAAAGCTAAGAGATTCTGTCTTGAAAAATTTGGAGCTACCTTGCACAAAGTTAACAATTTCTGTTGAGGGTCCTTACGGGCATGAAAAACCGTACCACATGATGTATGAAAATCTCATCTTAGTAGCAGGTGGCATTGGGATTTCACCTTTCTTGGCTGTCTTAAGTGACATTCTCCACTCTGTTAAGGAAGGAAAACCTTGCCTACCAAGAAATATTTTACTTGTCTGGGCAGTCAAAAGATCAGATGAGCTTTCTCTTCTTTCAACCATTGGCATGGACTCAACTATCTATCCATCTTTCTCTAATAAACTAAATCTTCAGGCCCATATTTACGTTACTCGGGAGTCTGAATTTCCATCGGAACATGGTGAAGTTGGAAATAGTACTGCAGATTCTTCTGATCTATGTCCCATGTCCAAAAGGTCTGGAATGTCCGTTTTGGTTGGTACTGGACATAATGTATGGTCTTGCCTGTATGTTATCTCATCTACTTTAGGCTTTGTCATCTTGTTGGGTTTGTTGGATTTCTTCTACATCAACCCTTTTGATATAACTTCATGGTCATACAAAGGATTTCTATTCTTAGCCTGTATGGTCGCAAGTGTCTTCATCTTTGGTGGTCTGGTGGTTTGTTTATGGCATCTTTCGGAGAAAAGAACTTCAGCAGAGGAAAAATGTGAGGATGATGAATCAAATTTTGGTAAGATTGAGCACACAGAAACTGTAACTTACAATGTTGCACACCAGGAAAGTCCTGCAAGTTTAACCAGGAGCATTCGTTATGGTGCAAGGCCAGACTTTAAAGAAATTTTTGGAAGCGTATCAAAGAATTGGGGCCATGTTGATGTGGGTGTCATTGTGTGTGGTCCTCCAACTCTTCAATCAAGTGTAGCTAAAGAAATCAGGTCACAAAGTATAAGAAGACAATCTGGAGATCCTATCTACCATTTCAACAGCCATAGCTTTAGTCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000293 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006091 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009767 GO:0009987 GO:0015979 GO:0016020 GO:0016491 GO:0016722 GO:0016723 GO:0019684 GO:0022900 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0055114 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

775

Amino Acids

86.48

Weight (kDa)

7.82

Isoelectric Point (pI)

44.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ferric_reduct	PF01794	225 - 346	5.5e-21	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	379 - 478	1.8e-19	FAD-binding domain
NAD_binding_6	PF08030	486 - 579	1.7e-11	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003400)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49730 AT5G49730 AT5G49740 AT5G49740 AT5G49740
fragaria_vesca	FvH4_5g27150 FvH4_5g27150 FvH4_5g27150 FvH4_5g27150 FvH4_5g27150
malus_domestica	MD08G1250800.v1.1 MD15G1140500.v1.1
prunus_persica	Prupe.1G587800_v2.0.a1 Prupe.1G587800_v2.0.a1
pyrus_communis	pycom08g21770 pycom15g12700
rosa_chinensis	RchiOBHm_Chr7g0218161 RchiOBHm_Chr7g0218171
rosa_laevigata	RLG00000002392
rosa_multiflora	Rmu_sc0003627.1_g000006 Rmu_sc0003627.1_g000007
rosa_roxburghii	Rroxscaffold_3G00241250 Rroxscaffold_3G00241260
rosa_rugosa	Rorug07G0174700 Rorug07G0174700 Rorug07G0174800
rosa_samantha	Rh7AG317100 Rh7AG317200 Rh7BG308300 Rh7BG315800 Rh7CG333900 Rh7CG334000 Rh7DG316000 Rh7DG316200
rosa_wichuraiana	Rw7G026830 Rw7G026840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	749
AarI	CACCTGC	1 cut(s)	1469
Acc36I	ACCTGC	1 cut(s)	1469
AccB1I	GGYRCC	1 cut(s)	403
AccII	CGCG	1 cut(s)	667
AciI	CCGC	7 cut(s)	47, 63, 93, 106, 288, 979, 1210
AclWI	GGATC	6 cut(s)	207, 576, 736, 925, 959, 2282
AcoI	YGGCCR	2 cut(s)	3, 969
AcsI	RAATTY	7 cut(s)	140, 982, 1242, 1378, 1703, 2047, 2160
AcuI	CTGAAG	2 cut(s)	1655, 1998
AcyI	GRCGYC	1 cut(s)	404
AfaI	GTAC	6 cut(s)	192, 400, 1214, 1445, 1738, 1801
AfiI	CCNNNNNNNGG	2 cut(s)	978, 1301
AflII	CTTAAG	1 cut(s)	1513
AgsI	TTSAA	7 cut(s)	87, 362, 469, 1375, 1617, 2234, 2305
AjnI	CCWGG	2 cut(s)	2097, 2120
AjuI	GAANNNNNNNTTGG	2 cut(s)	2034, 2066
AleI	CACNNNNGTG	1 cut(s)	587
Alw21I	GWGCWC	1 cut(s)	2067
Alw26I	GTCTC	2 cut(s)	252, 520
AlwI	GGATC	6 cut(s)	207, 576, 736, 925, 959, 2282
AlwNI	CAGNNNCTG	1 cut(s)	2075
Ama87I	CYCGRG	1 cut(s)	1692
AoxI	GGCC	7 cut(s)	3, 826, 969, 1078, 1674, 2144, 2188
ApeKI	GCWGC	6 cut(s)	65, 233, 521, 808, 1073, 1261
ApoI	RAATTY	7 cut(s)	140, 982, 1242, 1378, 1703, 2047, 2160
AseI	ATTAAT	2 cut(s)	434, 644
Asp700I	GAANNNNTTC	1 cut(s)	107
AspLEI	GCGC	2 cut(s)	406, 667
AspS9I	GGNCC	9 cut(s)	290, 477, 500, 1079, 1186, 1421, 1675, 2188, 2219
AsuHPI	GGTGA	3 cut(s)	23, 1488, 1733
AsuII	TTCGAA	1 cut(s)	1240
AvaI	CYCGRG	1 cut(s)	1692
AvaII	GGWCC	6 cut(s)	290, 477, 500, 1186, 1421, 2219
BaeI	ACNNNNGTAYC	2 cut(s)	885, 918
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	1 cut(s)	403
BbsI	GAAGAC	2 cut(s)	1951, 2281
Bbv12I	GWGCWC	1 cut(s)	2067
BbvI	GCAGC	6 cut(s)	52, 220, 508, 795, 1060, 1248
BccI	CCATC	4 cut(s)	491, 1295, 1654, 1717
BceAI	ACGGC	2 cut(s)	417, 841
BciT130I	CCWGG	2 cut(s)	2099, 2122
BciVI	GTATCC	1 cut(s)	886
BcoDI	GTCTC	2 cut(s)	252, 520
BfmI	CTRYAG	5 cut(s)	442, 1068, 1074, 1176, 1740
BfoI	RGCGCY	1 cut(s)	407
BfrI	CTTAAG	1 cut(s)	1513
BfuAI	ACCTGC	1 cut(s)	1469
BfuI	GTATCC	1 cut(s)	886
BisI	GCNGC	7 cut(s)	47, 66, 234, 522, 809, 1074, 1262
BlsI	GCNGC	7 cut(s)	48, 67, 235, 523, 810, 1075, 1263
BmcAI	AGTACT	1 cut(s)	1738
Bme1390I	CCNGG	2 cut(s)	2099, 2122
Bme18I	GGWCC	6 cut(s)	290, 477, 500, 1186, 1421, 2219
BmeT110I	CYCGRG	1 cut(s)	1692
BmgT120I	GGNCC	9 cut(s)	290, 477, 500, 1079, 1186, 1421, 1675, 2188, 2219
BmiI	GGNNCC	4 cut(s)	405, 1081, 1422, 2189
BmrFI	CCNGG	2 cut(s)	2099, 2122
BmsI	GCATC	2 cut(s)	1279, 2002
BpiI	GAAGAC	2 cut(s)	1951, 2281
BpmI	CTGGAG	1 cut(s)	2304
Bpu14I	TTCGAA	1 cut(s)	1240
BsaBI	GATNNNNATC	1 cut(s)	950
BsaHI	GRCGYC	1 cut(s)	404
BsaJI	CCNNGG	2 cut(s)	628, 823
BsaWI	WCCGGW	1 cut(s)	390
BsaXI	ACNNNNNCTCC	4 cut(s)	949, 979, 2116, 2146
Bsc4I	CCNNNNNNNGG	2 cut(s)	978, 1301
Bse118I	RCCGGY	1 cut(s)	715
Bse1I	ACTGG	4 cut(s)	244, 901, 1290, 1807
Bse3DI	GCAATG	3 cut(s)	162, 810, 1271
Bse8I	GATNNNNATC	1 cut(s)	950
BseBI	CCWGG	2 cut(s)	2099, 2122
BseDI	CCNNGG	2 cut(s)	628, 823
BseGI	GGATG	4 cut(s)	502, 1270, 1306, 2041
BseJI	GATNNNNATC	1 cut(s)	950
BseLI	CCNNNNNNNGG	2 cut(s)	978, 1301
BseMI	GCAATG	3 cut(s)	162, 810, 1271
BseMII	CTCAG	2 cut(s)	1103, 1237
BseNI	ACTGG	4 cut(s)	244, 901, 1290, 1807
BseXI	GCAGC	6 cut(s)	52, 220, 508, 795, 1060, 1248
BseYI	CCCAGC	1 cut(s)	790
BsgI	GTGCAG	1 cut(s)	638
Bsh1236I	CGCG	1 cut(s)	667
BshFI	GGCC	7 cut(s)	5, 828, 971, 1080, 1676, 2146, 2190
BshNI	GGYRCC	1 cut(s)	403
BsiHKAI	GWGCWC	1 cut(s)	2067
BsiHKCI	CYCGRG	1 cut(s)	1692
BsiSI	CCGG	3 cut(s)	391, 716, 968
BslFI	GGGAC	2 cut(s)	220, 1746
BslI	CCNNNNNNNGG	2 cut(s)	978, 1301
BsmAI	GTCTC	2 cut(s)	252, 520
BsmFI	GGGAC	2 cut(s)	220, 1746
BsmI	GAATGC	2 cut(s)	578, 2127
BsnI	GGCC	7 cut(s)	5, 828, 971, 1080, 1676, 2146, 2190
BsoBI	CYCGRG	1 cut(s)	1692
Bsp119I	TTCGAA	1 cut(s)	1240
Bsp1286I	GDGCHC	1 cut(s)	2067
BspACI	CCGC	7 cut(s)	47, 63, 93, 106, 288, 979, 1210
BspANI	GGCC	7 cut(s)	5, 828, 971, 1080, 1676, 2146, 2190
BspCNI	CTCAG	2 cut(s)	1104, 1236
BspFNI	CGCG	1 cut(s)	667
BspLI	GGNNCC	4 cut(s)	405, 1081, 1422, 2189
BspMAI	CTGCAG	2 cut(s)	1078, 1744
BspMI	ACCTGC	1 cut(s)	1469
BspPI	GGATC	6 cut(s)	207, 576, 736, 925, 959, 2282
BspT104I	TTCGAA	1 cut(s)	1240
BspT107I	GGYRCC	1 cut(s)	403
BspTI	CTTAAG	1 cut(s)	1513
BsrDI	GCAATG	3 cut(s)	162, 810, 1271
BsrFI	RCCGGY	1 cut(s)	715
BsrI	ACTGG	4 cut(s)	244, 901, 1290, 1807
BssAI	RCCGGY	1 cut(s)	715
BssECI	CCNNGG	2 cut(s)	628, 823
BssNI	GRCGYC	1 cut(s)	404
BssT1I	CCWWGG	1 cut(s)	628
Bst2UI	CCWGG	2 cut(s)	2099, 2122
Bst4CI	ACNGT	4 cut(s)	263, 1177, 1443, 2077
Bst6I	CTCTTC	2 cut(s)	1614, 2235
BstACI	GRCGYC	1 cut(s)	404
BstAFI	CTTAAG	1 cut(s)	1513
BstAPI	GCANNNNNTGC	1 cut(s)	173
BstBI	TTCGAA	1 cut(s)	1240
BstC8I	GCNNGC	4 cut(s)	231, 373, 768, 1078
BstDEI	CTNAG	7 cut(s)	869, 929, 1112, 1223, 1358, 1471, 1936
BstDSI	CCRYGG	1 cut(s)	823
BstF5I	GGATG	4 cut(s)	502, 1270, 1306, 2041
BstFNI	CGCG	1 cut(s)	667
BstH2I	RGCGCY	1 cut(s)	407
BstHHI	GCGC	2 cut(s)	406, 667
BstMAI	GTCTC	2 cut(s)	252, 520
BstMWI	GCNNNNNNNGC	8 cut(s)	74, 173, 314, 584, 693, 911, 1258, 1267
BstNI	CCWGG	2 cut(s)	2099, 2122
BstNSI	RCATGY	2 cut(s)	375, 770
BstSCI	CCNGG	2 cut(s)	2097, 2120
BstSFI	CTRYAG	5 cut(s)	442, 1068, 1074, 1176, 1740
BstUI	CGCG	1 cut(s)	667
BstV1I	GCAGC	6 cut(s)	52, 220, 508, 795, 1060, 1248
BstV2I	GAAGAC	2 cut(s)	1951, 2281
BstX2I	RGATCY	3 cut(s)	199, 568, 2287
BstXI	CCANNNNNNTGG	2 cut(s)	1297, 1627
BstYI	RGATCY	3 cut(s)	199, 568, 2287
BsuI	GTATCC	1 cut(s)	886
BsuRI	GGCC	7 cut(s)	5, 828, 971, 1080, 1676, 2146, 2190
BtgI	CCRYGG	1 cut(s)	823
BtsCI	GGATG	4 cut(s)	502, 1270, 1306, 2041
BtsI	GCAGTG	1 cut(s)	594
BtsIMutI	CAGTG	3 cut(s)	268, 594, 1285
BveI	ACCTGC	1 cut(s)	1469
Cac8I	GCNNGC	4 cut(s)	231, 373, 768, 1078
CaiI	CAGNNNCTG	1 cut(s)	2075
CfoI	GCGC	2 cut(s)	406, 667
Cfr10I	RCCGGY	1 cut(s)	715
Cfr13I	GGNCC	9 cut(s)	290, 477, 500, 1079, 1186, 1421, 1675, 2188, 2219
Csp6I	GTAC	6 cut(s)	191, 399, 1213, 1444, 1737, 1800
CviQI	GTAC	6 cut(s)	191, 399, 1213, 1444, 1737, 1800
DdeI	CTNAG	7 cut(s)	869, 929, 1112, 1223, 1358, 1471, 1936
DinI	GGCGCC	1 cut(s)	405
DraI	TTTAAA	1 cut(s)	2155
EaeI	YGGCCR	2 cut(s)	3, 969
Eam1104I	CTCTTC	2 cut(s)	1614, 2235
EarI	CTCTTC	2 cut(s)	1614, 2235
Eco130I	CCWWGG	1 cut(s)	628
Eco47I	GGWCC	6 cut(s)	290, 477, 500, 1186, 1421, 2219
Eco57I	CTGAAG	2 cut(s)	1655, 1998
Eco88I	CYCGRG	1 cut(s)	1692
EcoO109I	RGGNCCY	2 cut(s)	1079, 1421
EcoRII	CCWGG	2 cut(s)	2097, 2120
EcoT14I	CCWWGG	1 cut(s)	628
EcoT22I	ATGCAT	2 cut(s)	373, 580
EgeI	GGCGCC	1 cut(s)	405
EheI	GGCGCC	1 cut(s)	405
ErhI	CCWWGG	1 cut(s)	628
FalI	AAGNNNNNCTT	2 cut(s)	92, 124
FaqI	GGGAC	2 cut(s)	220, 1746
FauI	CCCGC	1 cut(s)	86
Fnu4HI	GCNGC	7 cut(s)	47, 66, 234, 522, 809, 1074, 1262
FokI	GGATG	4 cut(s)	509, 1257, 1313, 2048
Fsp4HI	GCNGC	7 cut(s)	47, 66, 234, 522, 809, 1074, 1262
GlaI	GCGC	2 cut(s)	405, 666
GluI	GCNGC	7 cut(s)	47, 66, 234, 522, 809, 1074, 1262
GsaI	CCCAGC	1 cut(s)	794
GsuI	CTGGAG	1 cut(s)	2304
HaeII	RGCGCY	1 cut(s)	407
HaeIII	GGCC	7 cut(s)	5, 828, 971, 1080, 1676, 2146, 2190
HapII	CCGG	3 cut(s)	391, 716, 968
HhaI	GCGC	2 cut(s)	406, 667
Hin1I	GRCGYC	1 cut(s)	404
Hin6I	GCGC	2 cut(s)	404, 665
HinP1I	GCGC	2 cut(s)	404, 665
HincII	GTYRAC	1 cut(s)	1404
HindII	GTYRAC	1 cut(s)	1404
HinfI	GANTC	7 cut(s)	14, 465, 1364, 1631, 1697, 1745, 2042
HpaI	GTTAAC	1 cut(s)	1404
HpaII	CCGG	3 cut(s)	391, 716, 968
HphI	GGTGA	3 cut(s)	23, 1488, 1733
Hpy166II	GTNNAC	3 cut(s)	592, 1307, 1404
Hpy188I	TCNGA	7 cut(s)	19, 1113, 1597, 1702, 1714, 1753, 2002
Hpy188III	TCNNGA	7 cut(s)	362, 1100, 1128, 1372, 1694, 1779, 2283
Hpy8I	GTNNAC	3 cut(s)	592, 1307, 1404
Hpy99I	CGWCG	1 cut(s)	74
HpyAV	CCTTC	3 cut(s)	883, 1172, 1535
HpyCH4III	ACNGT	4 cut(s)	263, 1177, 1443, 2077
HpyCH4IV	ACGT	3 cut(s)	72, 1017, 1686
HpyF10VI	GCNNNNNNNGC	8 cut(s)	74, 173, 314, 584, 693, 911, 1258, 1267
HpyF3I	CTNAG	7 cut(s)	869, 929, 1112, 1223, 1358, 1471, 1936
HpySE526I	ACGT	3 cut(s)	72, 1017, 1686
Hsp92I	GRCGYC	1 cut(s)	404
HspAI	GCGC	2 cut(s)	404, 665
KasI	GGCGCC	1 cut(s)	403
KspAI	GTTAAC	1 cut(s)	1404
LmnI	GCTCC	4 cut(s)	82, 1249, 1384, 2124
Lsp1109I	GCAGC	6 cut(s)	52, 220, 508, 795, 1060, 1248
LweI	GCATC	2 cut(s)	1279, 2002
MaeII	ACGT	3 cut(s)	72, 1017, 1686
MaeIII	GTNAC	4 cut(s)	1517, 1687, 2077, 2259
MflI	RGATCY	3 cut(s)	199, 568, 2287
MhlI	GDGCHC	1 cut(s)	2067
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
Mly113I	GGCGCC	1 cut(s)	404
MlyI	GAGTC	2 cut(s)	1625, 1706
MmeI	TCCRAC	4 cut(s)	81, 1708, 1854, 2249
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	2 cut(s)	373, 580
MroXI	GAANNNNTTC	1 cut(s)	107
MscI	TGGCCA	1 cut(s)	5
MslI	CAYNNNNRTG	4 cut(s)	587, 1025, 1625, 2196
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	3 cut(s)	65, 288, 1073
MspCI	CTTAAG	1 cut(s)	1513
MspI	CCGG	3 cut(s)	391, 716, 968
MspR9I	CCNGG	2 cut(s)	2099, 2122
Mva1269I	GAATGC	2 cut(s)	578, 2127
MvaI	CCWGG	2 cut(s)	2099, 2122
MvnI	CGCG	1 cut(s)	667
MwoI	GCNNNNNNNGC	8 cut(s)	74, 173, 314, 584, 693, 911, 1258, 1267
NarI	GGCGCC	1 cut(s)	404
NlaIV	GGNNCC	4 cut(s)	405, 1081, 1422, 2189
NmuCI	GTSAC	2 cut(s)	1517, 2259
NsiI	ATGCAT	2 cut(s)	373, 580
NspI	RCATGY	2 cut(s)	375, 770
NspV	TTCGAA	1 cut(s)	1240
OliI	CACNNNNGTG	1 cut(s)	587
PaeI	GCATGC	2 cut(s)	375, 770
PaqCI	CACCTGC	1 cut(s)	1469
PcsI	WCGNNNNNNNCGW	2 cut(s)	1023, 1197
PctI	GAATGC	2 cut(s)	578, 2127
PdmI	GAANNNNTTC	1 cut(s)	107
PfeI	GAWTC	5 cut(s)	14, 465, 1364, 1745, 2042
PkrI	GCNGC	7 cut(s)	48, 67, 235, 523, 810, 1075, 1263
PleI	GAGTC	2 cut(s)	1625, 1705
PluTI	GGCGCC	1 cut(s)	407
PpsI	GAGTC	2 cut(s)	1625, 1705
PpuMI	RGGWCCY	1 cut(s)	1421
PshBI	ATTAAT	2 cut(s)	434, 644
PsiI	TTATAA	1 cut(s)	749
Psp5II	RGGWCCY	1 cut(s)	1421
Psp6I	CCWGG	2 cut(s)	2097, 2120
PspFI	CCCAGC	1 cut(s)	790
PspGI	CCWGG	2 cut(s)	2097, 2120
PspN4I	GGNNCC	4 cut(s)	405, 1081, 1422, 2189
PspPI	GGNCC	9 cut(s)	290, 477, 500, 1079, 1186, 1421, 1675, 2188, 2219
PspPPI	RGGWCCY	1 cut(s)	1421
PstI	CTGCAG	2 cut(s)	1078, 1744
PstNI	CAGNNNCTG	1 cut(s)	2075
PsuI	RGATCY	3 cut(s)	199, 568, 2287
PvuII	CAGCTG	1 cut(s)	1073
RsaI	GTAC	6 cut(s)	192, 400, 1214, 1445, 1738, 1801
RsaNI	GTAC	6 cut(s)	191, 399, 1213, 1444, 1737, 1800
RseI	CAYNNNNRTG	4 cut(s)	587, 1025, 1625, 2196
SatI	GCNGC	7 cut(s)	47, 66, 234, 522, 809, 1074, 1262
Sau96I	GGNCC	9 cut(s)	290, 477, 500, 1079, 1186, 1421, 1675, 2188, 2219
ScaI	AGTACT	1 cut(s)	1738
SchI	GAGTC	2 cut(s)	1625, 1706
ScrFI	CCNGG	2 cut(s)	2099, 2122
SduI	GDGCHC	1 cut(s)	2067
SfaNI	GCATC	2 cut(s)	1279, 2002
SfcI	CTRYAG	5 cut(s)	442, 1068, 1074, 1176, 1740
SfoI	GGCGCC	1 cut(s)	405
SfuI	TTCGAA	1 cut(s)	1240
SinI	GGWCC	6 cut(s)	290, 477, 500, 1186, 1421, 2219
SmiMI	CAYNNNNRTG	4 cut(s)	587, 1025, 1625, 2196
SmlI	CTYRAG	1 cut(s)	1513
SmoI	CTYRAG	1 cut(s)	1513
SphI	GCATGC	2 cut(s)	375, 770
SsiI	CCGC	7 cut(s)	47, 63, 93, 106, 288, 979, 1210
SspDI	GGCGCC	1 cut(s)	403
SspI	AATATT	3 cut(s)	754, 879, 1567
StyD4I	CCNGG	2 cut(s)	2097, 2120
StyI	CCWWGG	1 cut(s)	628
TaaI	ACNGT	4 cut(s)	263, 1177, 1443, 2077
TaiI	ACGT	3 cut(s)	75, 1020, 1689
TaqI	TCGA	4 cut(s)	125, 463, 987, 1240
TatI	WGTACW	1 cut(s)	1736
TauI	GCSGC	1 cut(s)	49
TfiI	GAWTC	5 cut(s)	14, 465, 1364, 1745, 2042
TscAI	CASTG	3 cut(s)	268, 594, 1285
TseFI	GTSAC	2 cut(s)	1517, 2259
TseI	GCWGC	6 cut(s)	65, 233, 521, 808, 1073, 1261
Tsp45I	GTSAC	2 cut(s)	1517, 2259
TspDTI	ATGAA	6 cut(s)	151, 1449, 1473, 1899, 1951, 2055
TspGWI	ACGGA	2 cut(s)	212, 1777
TspRI	CASTG	3 cut(s)	268, 594, 1285
Vha464I	CTTAAG	1 cut(s)	1513
VpaK11BI	GGWCC	6 cut(s)	290, 477, 500, 1186, 1421, 2219
VspI	ATTAAT	2 cut(s)	434, 644
XapI	RAATTY	7 cut(s)	140, 982, 1242, 1378, 1703, 2047, 2160
XceI	RCATGY	2 cut(s)	375, 770
XmnI	GAANNNNTTC	1 cut(s)	107
ZrmI	AGTACT	1 cut(s)	1738
Zsp2I	ATGCAT	2 cut(s)	373, 580

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.