Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0013996

Physical Location & Seq

Genomic Coordinates Reverse (-)

12199556 .. 12202458

Gene Structure 2903 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g17320.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2322 bp

ATGGCGCTAAATTTGCCCACTTCCTGTCCCATTTTCGCGCCACTATTGAACCCGAGCCTGACCAACAACCCGAATGAGCACCGCCCTCCAACGGAGGTCCGGTTCGCTCGGTGGAACAATGCCAACGCCGAGAAATTCAACCAGCGCCGGAGGGCCCAGCAAGAAATCGAGGACGACATTCACCGGGAGCGCCGATTCGAGTCCGCCACCAGAATTGCCACTCTTTCCGACTCTGCCACTGACACCACAACCGCCGCGGCCAACTCCACCACGAGTAGTGAAACATATAAATCCATCGGCACGCCGTCTTATCCCTCGAGCCCTTCAATCCAAGGCAAGAAATCCAAGTACTCTAAAAACCCAAACCCTACCGATTCGCACCCCGCATTCCGCCGAATCATACGACCCACGAAGCTCTCGAAAATCCCGAGGGAGAAAAAACCAGCAGTCGACAGAAAAGCCGACATTTCCATCGGCGACGATGGGCTTTCTTACGTCATCGACGGAGCCCCGTTTGAATTCAAGTACAGCTACACCGAGACCCCTAAAATCAAGCCCATTAAGCTCCGGGAACCGCCGTTCGCGCCATTCGGGCCCACCACGATGGACCGGCCATGGACGGGTCGGGCCCCATTGCCGGCGAGCAAGAAGAAATTGAAGGAATTCGACTCGTTCCAGCTGCCTCCGCCGCACAAGAAGGGGGTTAAGCCGGTGCAATCTCCGGGTCCGTATTTGACCGGATCGGGTCCTAAGTATGTGAAGTCCAGGGAGGAGATTTTGGGAGATCCCCTGACGGTTGAGGAAGTTAAGGACTTAGTTAAAGGGTGTATCAAAACCAAGAGGCAGTTGAATATGGGTAGAGATGGTTTGACTCACAACATGTTGGATAACATACATGCTCACTGGAAGCGCCGGAGAGTGTGCAAGATTAAATGCAAAGGAGTTTGTACAGTCGACATGGAGACCGTGTGCGAGCAATTAGAGGAAAGAACTGGAGGGAAGATCATTTACAGGAAAGGTGGAGTGATATACCTTTTCCGAGGCAGAAACTACAACTATAAAACTCGTCCTAAGTTTCCTCTAATGCTTTGGAGACCTATCACTCCTGTATATCCTAGACTGATTCAGCGGGCACCTGAGGGTCTAACAGTAGAAGAAGCATCTGAGATGCGTAAGAAGGGACGGAATCTGATACCAATATGCAAGCTAGGGAAAAATGGTGTATACTCTGAATTGGTAAAAAATGTCAGAGAGGCCTTTGAAGAGTGTGAGCTAGTTCGGATAAATTGTCAGGGGATGAACGCGAGTGACTACCGAAAAATAGGTGGTAAACTAAAGGATCTTGTCCCTTGTGTGTTACTGTCATTTGAACTTGAGCACATTCTTTTGTGGAGAGGACGGGAATGGAAGTCTTCTCTTCCAAATCCAGAGAATGATCTCAAGGAAGTCAAAGAGTCTAATGTAGATGGTTCAACTTCAATTGCATCAACATCACGTGCTTCTGAAGTTGTGGGTGCAGAGGGAAGTAAGGATCTCTCGCCATCACAATATGTTGGGCCATGTGCCACAGTTGATGGGGTTTCTACCGTTGGAGGAACCTCTGAAACTGAACCCATTTCAGATGTTGAAGGCTATATAAGCAATGAATCAGAAGCTAAAATGAATGCTGATAACAGCTCAACCATACCAGACAATATCCACTATGCTGCTGATAAGTCAAAAACTACGCCCCATACATCTGAAATGGAGCCCATGTTGGCTAATGCAGGCTGTGATGATGAAGCATCATCAACCGCAGTAATGGCCTCTGAGGCCATCGCAGTGCCTTTTGGAAACTCTGAAACAAAGTTGGAGTCCATCATGGCAGGTTCTGGAAGCAATGAGAATCCAGAAGATGGTTCAGTAGGCTCAGAAATTCTTAGTGAGCCAGCAAAGCTGAGTGCACCTTGTACAGAGAATGTGCTGTTACTCTTGAATGAAGCTGTTGGTAGTGGGAGTGCACTTATTTTAGACGAGTCGTCGCTGAATGCCGACATTATTTATCAACGGGCAGTTGCCTTCGCGCAGTCTGCTCCCCCTGGCCCCGTGTTTAAGCATCAACGACCCAAGAAAGTAGCAGTTCTAAAGAGAGTAAAGGTTGTGAAGCAAGATGCCGGGGATCCAGAAGTGAAAGAGATAACAGTTTCTGCGAAGACAGGAAGTGAGAAGATTCAGAAGGGTAGTAAAGTTAAAAGAATAAGAGATTTTGGTGAAAATCTAGTAGATAAGGTTGTACCAAAGGGAAGTTTGAGAGTTGATGAACTTGCTAAGCTATTAGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000373 GO:0000375 GO:0000377 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRS1_YhbY

Protein Analysis

774

Amino Acids

85.07

Weight (kDa)

9.02

Isoelectric Point (pI)

43.65

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013996)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20020
fragaria_vesca	FvH4_1g05780
malus_domestica	MD02G1059500.v1.1 MD15G1193500.v1.1
prunus_persica	Prupe.7G223600_v2.0.a1
pyrus_communis	pycom02g04850 pycom15g17320
rosa_chinensis	RchiOBHm_Chr2g0091431
rosa_laevigata	RLG00000016223
rosa_multiflora	Rmu_ssc0000333.1_g000008
rosa_roxburghii	Rroxscaffold_2G00150090
rosa_rugosa	Rorug02G0017800
rosa_samantha	Rh2AG062700 Rh2BG062000 Rh2CG063900 Rh2DG062300
rosa_wichuraiana	Rw2G005740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1856
AccB1I	GGYRCC	1 cut(s)	1132
AccB7I	CCANNNNNTGG	1 cut(s)	1895
AccI	GTMKAC	3 cut(s)	450, 954, 1224
AccII	CGCG	5 cut(s)	38, 257, 584, 1304, 2063
AclWI	GGATC	6 cut(s)	748, 779, 1347, 1539, 2153, 2166
AcoI	YGGCCR	2 cut(s)	258, 611
AcsI	RAATTY	5 cut(s)	10, 134, 518, 662, 1914
AcuI	CTGAAG	1 cut(s)	1524
AcvI	CACGTG	1 cut(s)	1496
AfaI	GTAC	5 cut(s)	350, 527, 949, 1951, 2274
AfiI	CCNNNNNNNGG	4 cut(s)	91, 620, 637, 1895
AflIII	ACRYGT	1 cut(s)	879
AhdI	GACNNNNNGTC	1 cut(s)	2017
AjnI	CCWGG	2 cut(s)	764, 2077
AloI	GAACNNNNNNTCC	4 cut(s)	86, 118, 563, 595
Alw21I	GWGCWC	4 cut(s)	81, 1380, 1945, 2002
Alw26I	GTCTC	3 cut(s)	533, 956, 1087
Alw44I	GTGCAC	2 cut(s)	1941, 1998
AlwI	GGATC	6 cut(s)	748, 779, 1347, 1539, 2153, 2166
AlwNI	CAGNNNCTG	2 cut(s)	1871, 2186
Ama87I	CYCGRG	3 cut(s)	52, 316, 427
ApaI	GGGCCC	3 cut(s)	157, 597, 631
ApaLI	GTGCAC	2 cut(s)	1941, 1998
ApeKI	GCWGC	2 cut(s)	679, 1706
ApoI	RAATTY	5 cut(s)	10, 134, 518, 662, 1914
ArsI	GACNNNNNNTTYG	2 cut(s)	1838, 1870
Asp700I	GAANNNNTTC	1 cut(s)	662
AspLEI	GCGC	7 cut(s)	7, 40, 147, 192, 586, 912, 2065
AsuC2I	CCSGG	4 cut(s)	185, 569, 723, 2155
AsuHPI	GGTGA	2 cut(s)	173, 2261
AvaI	CYCGRG	3 cut(s)	52, 316, 427
AvaII	GGWCC	4 cut(s)	97, 607, 725, 746
AxyI	CCTNAGG	1 cut(s)	1137
BaeGI	GKGCMC	6 cut(s)	157, 597, 631, 1135, 1945, 2002
BamHI	GGATCC	1 cut(s)	2158
BanI	GGYRCC	1 cut(s)	1132
BanII	GRGCYC	6 cut(s)	157, 323, 511, 597, 631, 1752
BarI	GAAGNNNNNNTAC	2 cut(s)	992, 1024
BauI	CACGAG	1 cut(s)	271
BbrPI	CACGTG	1 cut(s)	1496
BbsI	GAAGAC	2 cut(s)	1404, 2198
Bbv12I	GWGCWC	4 cut(s)	81, 1380, 1945, 2002
BbvI	GCAGC	2 cut(s)	666, 1693
BceAI	ACGGC	2 cut(s)	289, 562
BciT130I	CCWGG	2 cut(s)	766, 2079
BcnI	CCSGG	4 cut(s)	185, 569, 723, 2155
BcoDI	GTCTC	3 cut(s)	533, 956, 1087
BfaI	CTAG	4 cut(s)	1116, 1208, 1274, 2258
BfoI	RGCGCY	4 cut(s)	8, 148, 193, 913
BfuAI	ACCTGC	1 cut(s)	1856
BglI	GCCNNNNNGGC	2 cut(s)	592, 1811
BisI	GCNGC	5 cut(s)	255, 258, 680, 689, 1707
BlpI	GCTNAGC	1 cut(s)	2307
BlsI	GCNGC	5 cut(s)	256, 259, 681, 690, 1708
BmcAI	AGTACT	1 cut(s)	350
Bme1390I	CCNGG	6 cut(s)	185, 569, 723, 766, 2079, 2155
Bme18I	GGWCC	4 cut(s)	97, 607, 725, 746
BmeRI	GACNNNNNGTC	1 cut(s)	2017
BmeT110I	CYCGRG	3 cut(s)	52, 316, 427
BmrFI	CCNGG	6 cut(s)	185, 569, 723, 766, 2079, 2155
BmsI	GCATC	6 cut(s)	1158, 1169, 1493, 1793, 2104, 2140
BpiI	GAAGAC	2 cut(s)	1404, 2198
BpmI	CTGGAG	1 cut(s)	1014
Bpu1102I	GCTNAGC	1 cut(s)	2307
BpuEI	CTTGAG	2 cut(s)	1394, 1424
BpuMI	CCSGG	4 cut(s)	185, 569, 723, 2155
BsaAI	YACGTR	1 cut(s)	1496
BsaI	GGTCTC	3 cut(s)	533, 956, 1087
BsaJI	CCNNGG	8 cut(s)	255, 331, 428, 614, 765, 1039, 2077, 2154
BsaWI	WCCGGW	2 cut(s)	99, 737
BsaXI	ACNNNNNCTCC	6 cut(s)	86, 116, 953, 983, 1739, 1769
Bsc4I	CCNNNNNNNGG	4 cut(s)	91, 620, 637, 1895
Bse118I	RCCGGY	3 cut(s)	609, 637, 709
Bse1I	ACTGG	2 cut(s)	908, 997
Bse21I	CCTNAGG	1 cut(s)	1137
Bse3DI	GCAATG	3 cut(s)	632, 1648, 1885
BseBI	CCWGG	2 cut(s)	766, 2079
BseDI	CCNNGG	8 cut(s)	255, 331, 428, 614, 765, 1039, 2077, 2154
BseGI	GGATG	1 cut(s)	1302
BseLI	CCNNNNNNNGG	4 cut(s)	91, 620, 637, 1895
BseMI	GCAATG	3 cut(s)	632, 1648, 1885
BseMII	CTCAG	5 cut(s)	1128, 1155, 1800, 1923, 1928
BseNI	ACTGG	2 cut(s)	908, 997
BseRI	GAGGAG	1 cut(s)	785
BseSI	GKGCMC	6 cut(s)	157, 597, 631, 1135, 1945, 2002
BseXI	GCAGC	2 cut(s)	666, 1693
BseYI	CCCAGC	1 cut(s)	156
BsgI	GTGCAG	1 cut(s)	1536
Bsh1236I	CGCG	5 cut(s)	38, 257, 584, 1304, 2063
BshNI	GGYRCC	1 cut(s)	1132
BsiHKAI	GWGCWC	4 cut(s)	81, 1380, 1945, 2002
BsiHKCI	CYCGRG	3 cut(s)	52, 316, 427
BslFI	GGGAC	3 cut(s)	12, 1194, 1331
BslI	CCNNNNNNNGG	4 cut(s)	91, 620, 637, 1895
BsmAI	GTCTC	3 cut(s)	533, 956, 1087
BsmFI	GGGAC	3 cut(s)	12, 1194, 1331
BsmI	GAATGC	3 cut(s)	386, 1669, 2032
Bso31I	GGTCTC	3 cut(s)	533, 956, 1087
BsoBI	CYCGRG	3 cut(s)	52, 316, 427
Bsp120I	GGGCCC	3 cut(s)	153, 593, 627
Bsp1407I	TGTACA	2 cut(s)	947, 1949
Bsp143I	GATC	7 cut(s)	740, 784, 1002, 1339, 1435, 1531, 2158
Bsp1720I	GCTNAGC	1 cut(s)	2307
Bsp19I	CCATGG	1 cut(s)	614
BspCNI	CTCAG	5 cut(s)	1129, 1156, 1801, 1922, 1929
BspFNI	CGCG	5 cut(s)	38, 257, 584, 1304, 2063
BspMI	ACCTGC	1 cut(s)	1856
BspPI	GGATC	6 cut(s)	748, 779, 1347, 1539, 2153, 2166
BspT107I	GGYRCC	1 cut(s)	1132
BspTNI	GGTCTC	3 cut(s)	533, 956, 1087
BsrDI	GCAATG	3 cut(s)	632, 1648, 1885
BsrFI	RCCGGY	3 cut(s)	609, 637, 709
BsrGI	TGTACA	2 cut(s)	947, 1949
BsrI	ACTGG	2 cut(s)	908, 997
BssAI	RCCGGY	3 cut(s)	609, 637, 709
BssECI	CCNNGG	8 cut(s)	255, 331, 428, 614, 765, 1039, 2077, 2154
BssMI	GATC	7 cut(s)	740, 784, 1002, 1339, 1435, 1531, 2158
BssNAI	GTATAC	1 cut(s)	1225
BssSI	CACGAG	1 cut(s)	271
BssT1I	CCWWGG	2 cut(s)	331, 614
Bst1107I	GTATAC	1 cut(s)	1225
Bst2BI	CACGAG	1 cut(s)	271
Bst2UI	CCWGG	2 cut(s)	766, 2079
Bst4CI	ACNGT	8 cut(s)	796, 952, 967, 1150, 1362, 1570, 1588, 2182
Bst6I	CTCTTC	2 cut(s)	1257, 1422
BstAUI	TGTACA	2 cut(s)	947, 1949
BstBAI	YACGTR	1 cut(s)	1496
BstC8I	GCNNGC	8 cut(s)	302, 639, 643, 974, 1131, 1205, 1768, 1929
BstDSI	CCRYGG	2 cut(s)	255, 614
BstF5I	GGATG	1 cut(s)	1302
BstFNI	CGCG	5 cut(s)	38, 257, 584, 1304, 2063
BstH2I	RGCGCY	4 cut(s)	8, 148, 193, 913
BstHHI	GCGC	7 cut(s)	7, 40, 147, 192, 586, 912, 2065
BstKTI	GATC	7 cut(s)	743, 787, 1005, 1342, 1438, 1534, 2161
BstMAI	GTCTC	3 cut(s)	533, 956, 1087
BstMBI	GATC	7 cut(s)	740, 784, 1002, 1339, 1435, 1531, 2158
BstNI	CCWGG	2 cut(s)	766, 2079
BstNSI	RCATGY	2 cut(s)	883, 899
BstSCI	CCNGG	6 cut(s)	183, 567, 721, 764, 2077, 2153
BstSLI	GKGCMC	6 cut(s)	157, 597, 631, 1135, 1945, 2002
BstUI	CGCG	5 cut(s)	38, 257, 584, 1304, 2063
BstV1I	GCAGC	2 cut(s)	666, 1693
BstV2I	GAAGAC	2 cut(s)	1404, 2198
BstX2I	RGATCY	4 cut(s)	784, 1339, 1531, 2158
BstXI	CCANNNNNNTGG	1 cut(s)	604
BstYI	RGATCY	4 cut(s)	784, 1339, 1531, 2158
BstZ17I	GTATAC	1 cut(s)	1225
Bsu36I	CCTNAGG	1 cut(s)	1137
BtgI	CCRYGG	2 cut(s)	255, 614
BtgZI	GCGATG	1 cut(s)	1801
BtsCI	GGATG	1 cut(s)	1302
BtsI	GCAGTG	1 cut(s)	1827
BtsIMutI	CAGTG	3 cut(s)	237, 901, 1827
BveI	ACCTGC	1 cut(s)	1856
Cac8I	GCNNGC	8 cut(s)	302, 639, 643, 974, 1131, 1205, 1768, 1929
CaiI	CAGNNNCTG	2 cut(s)	1871, 2186
CfoI	GCGC	7 cut(s)	7, 40, 147, 192, 586, 912, 2065
Cfr10I	RCCGGY	3 cut(s)	609, 637, 709
Cfr42I	CCGCGG	1 cut(s)	258
Csp6I	GTAC	5 cut(s)	349, 526, 948, 1950, 2273
CspCI	CAANNNNNGTGG	2 cut(s)	196, 231
CviAII	CATG	8 cut(s)	615, 880, 896, 958, 1560, 1753, 1861, 2319
CviQI	GTAC	5 cut(s)	349, 526, 948, 1950, 2273
DpnI	GATC	7 cut(s)	742, 786, 1004, 1341, 1437, 1533, 2160
DpnII	GATC	7 cut(s)	740, 784, 1002, 1339, 1435, 1531, 2158
DriI	GACNNNNNGTC	1 cut(s)	2017
EaeI	YGGCCR	2 cut(s)	258, 611
Eam1104I	CTCTTC	2 cut(s)	1257, 1422
Eam1105I	GACNNNNNGTC	1 cut(s)	2017
EarI	CTCTTC	2 cut(s)	1257, 1422
EciI	GGCGGA	3 cut(s)	193, 380, 675
Eco130I	CCWWGG	2 cut(s)	331, 614
Eco147I	AGGCCT	1 cut(s)	1256
Eco24I	GRGCYC	6 cut(s)	157, 323, 511, 597, 631, 1752
Eco31I	GGTCTC	3 cut(s)	533, 956, 1087
Eco47I	GGWCC	4 cut(s)	97, 607, 725, 746
Eco57I	CTGAAG	1 cut(s)	1524
Eco72I	CACGTG	1 cut(s)	1496
Eco81I	CCTNAGG	1 cut(s)	1137
Eco88I	CYCGRG	3 cut(s)	52, 316, 427
EcoO109I	RGGNCCY	3 cut(s)	153, 628, 746
EcoRI	GAATTC	2 cut(s)	518, 662
EcoRII	CCWGG	2 cut(s)	764, 2077
EcoT14I	CCWWGG	2 cut(s)	331, 614
EcoT38I	GRGCYC	6 cut(s)	157, 323, 511, 597, 631, 1752
ErhI	CCWWGG	2 cut(s)	331, 614
FaeI	CATG	8 cut(s)	618, 883, 899, 961, 1563, 1756, 1864, 2322
FaqI	GGGAC	3 cut(s)	12, 1194, 1331
FatI	CATG	8 cut(s)	614, 879, 895, 957, 1559, 1752, 1860, 2318
FauI	CCCGC	2 cut(s)	391, 1122
FblI	GTMKAC	3 cut(s)	450, 954, 1224
Fnu4HI	GCNGC	5 cut(s)	255, 258, 680, 689, 1707
FokI	GGATG	1 cut(s)	1309
FriOI	GRGCYC	6 cut(s)	157, 323, 511, 597, 631, 1752
Fsp4HI	GCNGC	5 cut(s)	255, 258, 680, 689, 1707
FspBI	CTAG	4 cut(s)	1116, 1208, 1274, 2258
GlaI	GCGC	7 cut(s)	6, 39, 146, 191, 585, 911, 2064
GluI	GCNGC	5 cut(s)	255, 258, 680, 689, 1707
GsaI	CCCAGC	1 cut(s)	160
GsuI	CTGGAG	1 cut(s)	1014
HaeII	RGCGCY	4 cut(s)	8, 148, 193, 913
HhaI	GCGC	7 cut(s)	7, 40, 147, 192, 586, 912, 2065
Hin1II	CATG	8 cut(s)	618, 883, 899, 961, 1563, 1756, 1864, 2322
Hin6I	GCGC	7 cut(s)	5, 38, 145, 190, 584, 910, 2063
HinP1I	GCGC	7 cut(s)	5, 38, 145, 190, 584, 910, 2063
HincII	GTYRAC	2 cut(s)	451, 955
HindII	GTYRAC	2 cut(s)	451, 955
HphI	GGTGA	2 cut(s)	173, 2261
Hpy166II	GTNNAC	6 cut(s)	451, 955, 1225, 1331, 1943, 2000
Hpy188III	TCNNGA	7 cut(s)	418, 427, 1427, 1872, 1889, 1972, 2162
Hpy8I	GTNNAC	6 cut(s)	451, 955, 1225, 1331, 1943, 2000
Hpy99I	CGWCG	3 cut(s)	482, 506, 2023
HpyAV	CCTTC	7 cut(s)	333, 652, 691, 1171, 1622, 2068, 2209
HpyCH4III	ACNGT	8 cut(s)	796, 952, 967, 1150, 1362, 1570, 1588, 2182
HpyCH4IV	ACGT	2 cut(s)	495, 1495
HpyCH4V	TGCA	9 cut(s)	715, 924, 936, 1203, 1484, 1517, 1766, 1943, 2000
HpySE526I	ACGT	2 cut(s)	495, 1495
Hsp92II	CATG	8 cut(s)	618, 883, 899, 961, 1563, 1756, 1864, 2322
HspAI	GCGC	7 cut(s)	5, 38, 145, 190, 584, 910, 2063
KroI	GCCGGC	1 cut(s)	637
KroNI	GCCGGC	1 cut(s)	639
KspI	CCGCGG	1 cut(s)	258
Kzo9I	GATC	7 cut(s)	740, 784, 1002, 1339, 1435, 1531, 2158
LmnI	GCTCC	5 cut(s)	187, 506, 570, 1747, 2077
Lsp1109I	GCAGC	2 cut(s)	666, 1693
LweI	GCATC	6 cut(s)	1158, 1169, 1493, 1793, 2104, 2140
MaeI	CTAG	4 cut(s)	1116, 1208, 1274, 2258
MaeII	ACGT	2 cut(s)	495, 1495
MaeIII	GTNAC	3 cut(s)	1307, 1356, 1965
MalI	GATC	7 cut(s)	742, 786, 1004, 1341, 1437, 1533, 2160
MboI	GATC	7 cut(s)	740, 784, 1002, 1339, 1435, 1531, 2158
MboII	GAAGA	9 cut(s)	661, 1012, 1166, 1274, 1404, 1409, 1904, 2203, 2218
MfeI	CAATTG	1 cut(s)	1479
MflI	RGATCY	4 cut(s)	784, 1339, 1531, 2158
MlyI	GAGTC	7 cut(s)	209, 224, 662, 865, 1463, 1862, 2024
MmeI	TCCRAC	5 cut(s)	113, 252, 864, 1570, 1830
MroNI	GCCGGC	1 cut(s)	637
MroXI	GAANNNNTTC	1 cut(s)	662
MseI	TTAA	7 cut(s)	561, 705, 807, 819, 930, 2091, 2229
MslI	CAYNNNNRTG	2 cut(s)	602, 1820
MspA1I	CMGCKG	3 cut(s)	257, 679, 1129
MspR9I	CCNGG	6 cut(s)	185, 569, 723, 766, 2079, 2155
MunI	CAATTG	1 cut(s)	1479
Mva1269I	GAATGC	3 cut(s)	386, 1669, 2032
MvaI	CCWGG	2 cut(s)	766, 2079
MvnI	CGCG	5 cut(s)	38, 257, 584, 1304, 2063
NaeI	GCCGGC	1 cut(s)	639
NciI	CCSGG	4 cut(s)	185, 569, 723, 2155
NcoI	CCATGG	1 cut(s)	614
NdeII	GATC	7 cut(s)	740, 784, 1002, 1339, 1435, 1531, 2158
NgoMIV	GCCGGC	1 cut(s)	637
NlaIII	CATG	8 cut(s)	618, 883, 899, 961, 1563, 1756, 1864, 2322
NmeAIII	GCCGAG	1 cut(s)	154
NmuCI	GTSAC	1 cut(s)	1307
NspI	RCATGY	2 cut(s)	883, 899
PaeR7I	CTCGAG	1 cut(s)	316
PceI	AGGCCT	1 cut(s)	1256
PciI	ACATGT	1 cut(s)	879
PcsI	WCGNNNNNNNCGW	2 cut(s)	416, 425
PctI	GAATGC	3 cut(s)	386, 1669, 2032
PdiI	GCCGGC	1 cut(s)	639
PdmI	GAANNNNTTC	1 cut(s)	662
PfeI	GAWTC	8 cut(s)	195, 374, 396, 1123, 1186, 1646, 1885, 2209
PflMI	CCANNNNNTGG	1 cut(s)	1895
PfoI	TCCNGGA	1 cut(s)	567
PkrI	GCNGC	5 cut(s)	256, 259, 681, 690, 1708
PleI	GAGTC	7 cut(s)	208, 224, 662, 865, 1462, 1861, 2023
PmaCI	CACGTG	1 cut(s)	1496
PmlI	CACGTG	1 cut(s)	1496
PpsI	GAGTC	7 cut(s)	208, 224, 662, 865, 1462, 1861, 2023
Ppu21I	YACGTR	1 cut(s)	1496
PpuMI	RGGWCCY	1 cut(s)	746
PscI	ACATGT	1 cut(s)	879
Psp5II	RGGWCCY	1 cut(s)	746
Psp6I	CCWGG	2 cut(s)	764, 2077
PspCI	CACGTG	1 cut(s)	1496
PspFI	CCCAGC	1 cut(s)	156
PspGI	CCWGG	2 cut(s)	764, 2077
PspOMI	GGGCCC	3 cut(s)	153, 593, 627
PspPPI	RGGWCCY	1 cut(s)	746
PspXI	VCTCGAGB	1 cut(s)	316
PstNI	CAGNNNCTG	2 cut(s)	1871, 2186
PsuI	RGATCY	4 cut(s)	784, 1339, 1531, 2158
PvuII	CAGCTG	1 cut(s)	679
RsaI	GTAC	5 cut(s)	350, 527, 949, 1951, 2274
RsaNI	GTAC	5 cut(s)	349, 526, 948, 1950, 2273
RseI	CAYNNNNRTG	2 cut(s)	602, 1820
SacII	CCGCGG	1 cut(s)	258
SalI	GTCGAC	2 cut(s)	449, 953
SaqAI	TTAA	7 cut(s)	561, 705, 807, 819, 930, 2091, 2229
SatI	GCNGC	5 cut(s)	255, 258, 680, 689, 1707
Sau3AI	GATC	7 cut(s)	740, 784, 1002, 1339, 1435, 1531, 2158
ScaI	AGTACT	1 cut(s)	350
SchI	GAGTC	7 cut(s)	209, 224, 662, 865, 1463, 1862, 2024
ScrFI	CCNGG	6 cut(s)	185, 569, 723, 766, 2079, 2155
SfaNI	GCATC	6 cut(s)	1158, 1169, 1493, 1793, 2104, 2140
SfiI	GGCCNNNNNGGCC	1 cut(s)	1811
Sfr274I	CTCGAG	1 cut(s)	316
Sfr303I	CCGCGG	1 cut(s)	258
SgrBI	CCGCGG	1 cut(s)	258
SinI	GGWCC	4 cut(s)	97, 607, 725, 746
SlaI	CTCGAG	1 cut(s)	316
SmiMI	CAYNNNNRTG	2 cut(s)	602, 1820
SmlI	CTYRAG	3 cut(s)	316, 1373, 1439
SmoI	CTYRAG	3 cut(s)	316, 1373, 1439
SseBI	AGGCCT	1 cut(s)	1256
SspMI	CTAG	4 cut(s)	1116, 1208, 1274, 2258
StuI	AGGCCT	1 cut(s)	1256
StyD4I	CCNGG	6 cut(s)	183, 567, 721, 764, 2077, 2153
StyI	CCWWGG	2 cut(s)	331, 614
TaaI	ACNGT	8 cut(s)	796, 952, 967, 1150, 1362, 1570, 1588, 2182
TaiI	ACGT	2 cut(s)	498, 1498
TaqI	TCGA	8 cut(s)	168, 198, 317, 419, 450, 501, 666, 954
TatI	WGTACW	4 cut(s)	348, 525, 947, 1949
TauI	GCSGC	3 cut(s)	257, 260, 691
TfiI	GAWTC	8 cut(s)	195, 374, 396, 1123, 1186, 1646, 1885, 2209
Tru1I	TTAA	7 cut(s)	561, 705, 807, 819, 930, 2091, 2229
Tru9I	TTAA	7 cut(s)	561, 705, 807, 819, 930, 2091, 2229
TscAI	CASTG	3 cut(s)	244, 908, 1827
TseFI	GTSAC	1 cut(s)	1307
TseI	GCWGC	2 cut(s)	679, 1706
Tsp45I	GTSAC	1 cut(s)	1307
TspDTI	ATGAA	6 cut(s)	1313, 1659, 1676, 1794, 1992, 2313
TspGWI	ACGGA	4 cut(s)	107, 519, 717, 1198
TspRI	CASTG	3 cut(s)	244, 908, 1827
Van91I	CCANNNNNTGG	1 cut(s)	1895
VneI	GTGCAC	2 cut(s)	1941, 1998
VpaK11BI	GGWCC	4 cut(s)	97, 607, 725, 746
XapI	RAATTY	5 cut(s)	10, 134, 518, 662, 1914
XceI	RCATGY	2 cut(s)	883, 899
XhoI	CTCGAG	1 cut(s)	316
XmiI	GTMKAC	3 cut(s)	450, 954, 1224
XmnI	GAANNNNTTC	1 cut(s)	662
XspI	CTAG	4 cut(s)	1116, 1208, 1274, 2258
ZrmI	AGTACT	1 cut(s)	350

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.