Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0013996

Physical Location & Seq

Genomic Coordinates Forward (+)

87546919 .. 87549960

Gene Structure 3042 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00150090.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2331 bp

ATGGCGCTAAATTTGCCGACTTCGTGCCCCATTTTCGCGCCAGCGGTGAACCCGAGCCCGGTCCACAACCCGCTCCAGAACCGCCCGCCCACGGAGGTCCGATTCGCGCGGTGGAACAACGCCAACGCCGAGAAATTCAACCAACGCCGCCGCGCCCAGCAAGAAATCGAGGACGACGTCCGCCGCGAGCGCCGCTTCGACTCCGCCACCAGAATAGCCACCGTCGCCGCCGACGACTCCTCCTCCGACGCCGAACCAACATTCAAATCCATAGGCACGCCTTCATCTCCCTCAAGCCCTTCAATTCCCGGCAGAAAATCCAAGTACTCCAAGAACCCTAACCCTAACCCTAGCTCGCACCCGGCGTTTCGCCGCGTCATCAGACCAACGAAGCTCTCGAGTATCTCCAGAGAGAAGCCGGAAATCGACCGGAAAGCTAACATCTCCGTCGGCGACGACGGGCTTTCGTACGTCATCGACGGCGCGCCGTTTGAGTTCAAGTACAGCTACACCGAGACCCCGAAGCAGAAGCCCATTAAGCTCCGGGAGCCGCCCTACGCGCCGTTCGGCCCAACCACGATGGGCCGGCCGTGGACGGGTCGGGCCCCATTGCCTCCGAGCAAGAAGAAACTGAAGGAGTTCGATTCATTCCAGCTGCCGCCGCCGCATAAGAAAGGGGTTAAGCCGGTGCAGTCGCCGGGTCCATATTTACCCGGGTCGGGTCCCAAGTATGTCAAGTCCAGGGAGGAGATATTGGGTGAGCCGTTGACCGATCAGGAAGTCAAAGACTTGGTTAATAGCTGTGTTAAGACCAGAAGGCAACTCAATATGGGTAGAGATGGATTGACACACAACATGCTGGATAATATTCATGCTCATTGGAAGCGGCGAAGAGTGTGCAAGATAAAATGTAAGGGGGTGTGTACAGTCGACATGGAAAATGTGTGCCAACAATTAGAGGTTGTTTTGGTTTTTGTTGCTTCAAGTTCCTTGAGTATATCATTTGACAGGAAAGAACTGGAGGGAAAATCATTTATAGAAGAGAGGGCTCCTGAGGGACTAACAGTTGAAGAAGCAACTGAAATGCGCAAGAAGGGAAGGAATCTGATACCAATACGCAAGCTAGGAAAAAATGGAGTATACGCTGACCTGGTAGACAATGTCAGAGAGGCCTTTGAAGAGTGTGAACTAGTGCGAATAGATTGTCAAGGGATGAATGGGAGTGACTACCGAAAAATAGGTGCTAAACTAAAGGATCTTGTCCCTTGTGTGCTAATTTCCTTTGAACGCGAGAACATTCTTGTGTGGAGAGGACAGGAATGGAAGTCTTCTTTCCTAAATCCGGAGAGTAATCTTAAGGAAGTCAAAAAATCTGATGTTGATGATTCAGCTTCTATTGCACCTTCCTTGGAAGGTGAAGAAGCGTTGACGTTATGTGCTTTTACAGCTTCAGTCAATGACGAAAATCCTCAAATGATCAACACTAGCATCACCTCTTCAAGTTCTGAAGTTGTGGGTGCTGAGGGAACTGAGGATCCATCCCCTTCACCATATATTGAGCCATGTGCCACAATTGATACAGTTTCCACTGTGGGAGGCACTTATGAAACTGTAACCATCTCGGACATCAAAGGCTTTAGAAATGATGAAGCAGAATTGGAAATGAAGGCCTATAGCAGTTCAACCTTACCGCAGGATACCAGCTATACCGATGATGAGGCCGAAACAATTTCCAGTACATCTGGAACTGAAAACATATTGGATAGTACATGCCATACTGATGAAGCATCAGCAACTACATCAGTGGGGACTGGGACCATGCCAGTTACTGTTGAAAGCACTGAAACAAAGTTGGATTCCCTCATGGTTGCCCCTGGTAGTAATGAGACTCCACAAGATGCTTCTATAGACTCGCAAAATCTCAATGAGCAAGCAAGGTTGAGTGCAGCCTGTAAAGAAAAGGTGCTATCACTCTTGAACGAAGCTGTTGGGAGTGGGAGTGCACTTATTTTAGACGATTCGTCGTTGGATGCTGACATCATATATCAGAGGGCAGTTGCTCTCGCCAAGTCTGCTCCACCTGGGCCAGTGTTTATGCATCGACCTAGGAGAGTTGCAGCTCAAATGAGTAAGAAGCTAGTAGTAAGAAAACAGAAGCAAGAAGCCACGGAGTTGGAAGTGAAAGAGATAACAGTTTATGCGAAGAAGGGAAGTGAGAAGAAGGATTCCAAAGTTCACAGAACAAAAACAAGAGATTTTGGTGAACCTCTAGATAGCATTGTACCACAGGGAAGCCTGAGAGTTGATGAACTTGCTAAGCTATTGGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000373 GO:0000375 GO:0000377 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRS1_YhbY

Protein Analysis

776

Amino Acids

85.4

Weight (kDa)

6.16

Isoelectric Point (pI)

55.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CRS1_YhbY	PF01985	256 - 320	4.3e-13	CRS1 / YhbY (CRM) domain
CRS1_YhbY	PF01985	354 - 437	1.4e-16	CRS1 / YhbY (CRM) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013996)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20020
fragaria_vesca	FvH4_1g05780
malus_domestica	MD02G1059500.v1.1 MD15G1193500.v1.1
prunus_persica	Prupe.7G223600_v2.0.a1
pyrus_communis	pycom02g04850 pycom15g17320
rosa_chinensis	RchiOBHm_Chr2g0091431
rosa_laevigata	RLG00000016223
rosa_multiflora	Rmu_ssc0000333.1_g000008
rosa_roxburghii	Rroxscaffold_2G00150090
rosa_rugosa	Rorug02G0017800
rosa_samantha	Rh2AG062700 Rh2BG062000 Rh2CG063900 Rh2DG062300
rosa_wichuraiana	Rw2G005740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	180
Acc16I	TGCGCA	1 cut(s)	1088
AccBSI	CCGCTC	1 cut(s)	73
AccI	GTMKAC	3 cut(s)	930, 1140, 1155
AccII	CGCG	9 cut(s)	38, 107, 109, 153, 186, 375, 485, 560, 1290
AccIII	TCCGGA	1 cut(s)	1342
AclWI	GGATC	3 cut(s)	1263, 1529, 1542
AcoI	YGGCCR	1 cut(s)	587
AcsI	RAATTY	2 cut(s)	10, 134
AcuI	CTGAAG	3 cut(s)	653, 1434, 1527
AcyI	GRCGYC	2 cut(s)	177, 249
AfaI	GTAC	7 cut(s)	326, 470, 503, 925, 1738, 1768, 2283
AfiI	CCNNNNNNNGG	5 cut(s)	58, 91, 596, 719, 1342
AflII	CTTAAG	1 cut(s)	1355
AhdI	GACNNNNNGTC	1 cut(s)	2020
AhlI	ACTAGT	1 cut(s)	1189
AjnI	CCWGG	4 cut(s)	740, 1149, 1873, 2080
AloI	GAACNNNNNNTCC	2 cut(s)	1519, 1551
Alw21I	GWGCWC	1 cut(s)	2005
Alw26I	GTCTC	2 cut(s)	509, 1880
Alw44I	GTGCAC	1 cut(s)	2001
AlwI	GGATC	3 cut(s)	1263, 1529, 1542
AlwNI	CAGNNNCTG	1 cut(s)	1829
Ama87I	CYCGRG	3 cut(s)	52, 397, 713
Aor13HI	TCCGGA	1 cut(s)	1342
AoxI	GGCC	8 cut(s)	568, 583, 587, 603, 1170, 1668, 1719, 2084
ApaI	GGGCCC	1 cut(s)	607
ApaLI	GTGCAC	1 cut(s)	2001
ApeKI	GCWGC	3 cut(s)	655, 1946, 2117
ApoI	RAATTY	2 cut(s)	10, 134
ArsI	GACNNNNNNTTYG	2 cut(s)	1189, 1221
AscI	GGCGCGCC	1 cut(s)	483
Asp700I	GAANNNNTTC	1 cut(s)	638
AspA2I	CCTAGG	1 cut(s)	2105
AspLEI	GCGC	9 cut(s)	7, 40, 109, 155, 192, 485, 487, 562, 1089
AsuC2I	CCSGG	7 cut(s)	59, 309, 362, 545, 699, 714, 715
AsuHPI	GGTGA	6 cut(s)	58, 770, 1427, 1483, 1539, 2273
AvaI	CYCGRG	3 cut(s)	52, 397, 713
AvaII	GGWCC	5 cut(s)	61, 97, 701, 722, 1815
AvrII	CCTAGG	1 cut(s)	2105
AxyI	CCTNAGG	1 cut(s)	1053
BaeGI	GKGCMC	3 cut(s)	29, 607, 2005
BamHI	GGATCC	1 cut(s)	1534
BanII	GRGCYC	3 cut(s)	59, 607, 1051
BbsI	GAAGAC	1 cut(s)	1320
Bbv12I	GWGCWC	1 cut(s)	2005
BbvCI	CCTCAGC	1 cut(s)	1521
BbvI	GCAGC	3 cut(s)	642, 1958, 2129
BccI	CCATC	4 cut(s)	574, 833, 1546, 1625
BceAI	ACGGC	5 cut(s)	472, 496, 547, 574, 748
BcgI	CGANNNNNNTGC	2 cut(s)	879, 913
BciT130I	CCWGG	4 cut(s)	742, 1151, 1875, 2082
BciVI	GTATCC	1 cut(s)	1690
BclI	TGATCA	1 cut(s)	1476
BcnI	CCSGG	7 cut(s)	59, 309, 362, 545, 699, 714, 715
BcoDI	GTCTC	2 cut(s)	509, 1880
BcuI	ACTAGT	1 cut(s)	1189
BfaI	CTAG	7 cut(s)	351, 1124, 1190, 1485, 2106, 2138, 2270
BfmI	CTRYAG	2 cut(s)	1672, 1905
BfoI	RGCGCY	2 cut(s)	8, 193
BfrI	CTTAAG	1 cut(s)	1355
BfuI	GTATCC	1 cut(s)	1690
BlnI	CCTAGG	1 cut(s)	2105
BlpI	GCTNAGC	1 cut(s)	2316
BmcAI	AGTACT	1 cut(s)	326
Bme18I	GGWCC	5 cut(s)	61, 97, 701, 722, 1815
BmeRI	GACNNNNNGTC	1 cut(s)	2020
BmeT110I	CYCGRG	3 cut(s)	52, 397, 713
BmiI	GGNNCC	9 cut(s)	549, 605, 606, 702, 723, 724, 1050, 1536, 1816
BmrI	ACTGGG	1 cut(s)	1821
BmsI	GCATC	5 cut(s)	1497, 1796, 1888, 2020, 2107
BmuI	ACTGGG	1 cut(s)	1821
BpiI	GAAGAC	1 cut(s)	1320
BpmI	CTGGAG	3 cut(s)	59, 391, 1040
Bpu10I	CCTNAGC	1 cut(s)	1521
Bpu1102I	GCTNAGC	1 cut(s)	2316
BpuEI	CTTGAG	2 cut(s)	277, 1012
BpuMI	CCSGG	7 cut(s)	59, 309, 362, 545, 699, 714, 715
BsaHI	GRCGYC	2 cut(s)	177, 249
BsaI	GGTCTC	1 cut(s)	509
BsaJI	CCNNGG	9 cut(s)	90, 590, 713, 741, 1407, 1873, 2081, 2105, 2166
BsaWI	WCCGGW	2 cut(s)	429, 1342
BsaXI	ACNNNNNCTCC	6 cut(s)	224, 227, 254, 257, 1984, 2014
Bsc4I	CCNNNNNNNGG	5 cut(s)	58, 91, 596, 719, 1342
Bse118I	RCCGGY	2 cut(s)	585, 685
Bse1I	ACTGG	5 cut(s)	1023, 1734, 1816, 1823, 2087
Bse21I	CCTNAGG	1 cut(s)	1053
Bse3DI	GCAATG	1 cut(s)	608
BseAI	TCCGGA	1 cut(s)	1342
BseBI	CCWGG	4 cut(s)	742, 1151, 1875, 2082
BseDI	CCNNGG	9 cut(s)	90, 590, 713, 741, 1407, 1873, 2081, 2105, 2166
BseGI	GGATG	3 cut(s)	1218, 1538, 2035
BseLI	CCNNNNNNNGG	5 cut(s)	58, 91, 596, 719, 1342
BseMI	GCAATG	1 cut(s)	608
BseMII	CTCAG	4 cut(s)	1044, 1512, 1521, 2288
BseNI	ACTGG	5 cut(s)	1023, 1734, 1816, 1823, 2087
BsePI	GCGCGC	1 cut(s)	483
BseRI	GAGGAG	3 cut(s)	229, 232, 761
BseSI	GKGCMC	3 cut(s)	29, 607, 2005
BseX3I	CGGCCG	1 cut(s)	587
BseXI	GCAGC	3 cut(s)	642, 1958, 2129
BseYI	CCCAGC	1 cut(s)	156
BsgI	GTGCAG	2 cut(s)	710, 1965
Bsh1236I	CGCG	9 cut(s)	38, 107, 109, 153, 186, 375, 485, 560, 1290
Bsh1285I	CGRYCG	2 cut(s)	430, 590
BshFI	GGCC	8 cut(s)	570, 585, 589, 605, 1172, 1670, 1721, 2086
BsiEI	CGRYCG	2 cut(s)	430, 590
BsiHKAI	GWGCWC	1 cut(s)	2005
BsiHKCI	CYCGRG	3 cut(s)	52, 397, 713
BsiWI	CGTACG	1 cut(s)	468
BslFI	GGGAC	5 cut(s)	708, 1071, 1247, 1822, 1828
BslI	CCNNNNNNNGG	5 cut(s)	58, 91, 596, 719, 1342
BsmAI	GTCTC	2 cut(s)	509, 1880
BsmFI	GGGAC	5 cut(s)	708, 1071, 1247, 1822, 1828
BsnI	GGCC	8 cut(s)	570, 585, 589, 605, 1172, 1670, 1721, 2086
Bso31I	GGTCTC	1 cut(s)	509
BsoBI	CYCGRG	3 cut(s)	52, 397, 713
Bsp120I	GGGCCC	1 cut(s)	603
Bsp1286I	GDGCHC	5 cut(s)	29, 59, 607, 1051, 2005
Bsp13I	TCCGGA	1 cut(s)	1342
Bsp1407I	TGTACA	1 cut(s)	923
Bsp143I	GATC	4 cut(s)	772, 1255, 1476, 1534
Bsp1720I	GCTNAGC	1 cut(s)	2316
BspANI	GGCC	8 cut(s)	570, 585, 589, 605, 1172, 1670, 1721, 2086
BspCNI	CTCAG	4 cut(s)	1045, 1513, 1522, 2289
BspEI	TCCGGA	1 cut(s)	1342
BspFNI	CGCG	9 cut(s)	38, 107, 109, 153, 186, 375, 485, 560, 1290
BspLI	GGNNCC	9 cut(s)	549, 605, 606, 702, 723, 724, 1050, 1536, 1816
BspPI	GGATC	3 cut(s)	1263, 1529, 1542
BspTI	CTTAAG	1 cut(s)	1355
BspTNI	GGTCTC	1 cut(s)	509
BsrBI	CCGCTC	1 cut(s)	73
BsrDI	GCAATG	1 cut(s)	608
BsrFI	RCCGGY	2 cut(s)	585, 685
BsrGI	TGTACA	1 cut(s)	923
BsrI	ACTGG	5 cut(s)	1023, 1734, 1816, 1823, 2087
BssAI	RCCGGY	2 cut(s)	585, 685
BssECI	CCNNGG	9 cut(s)	90, 590, 713, 741, 1407, 1873, 2081, 2105, 2166
BssHII	GCGCGC	1 cut(s)	483
BssMI	GATC	4 cut(s)	772, 1255, 1476, 1534
BssNAI	GTATAC	1 cut(s)	1141
BssNI	GRCGYC	2 cut(s)	177, 249
BssT1I	CCWWGG	2 cut(s)	1407, 2105
Bst1107I	GTATAC	1 cut(s)	1141
Bst2UI	CCWGG	4 cut(s)	742, 1151, 1875, 2082
Bst4CI	ACNGT	8 cut(s)	223, 928, 1066, 1582, 1591, 1612, 1831, 2194
Bst6I	CTCTTC	4 cut(s)	886, 1035, 1173, 1501
BstACI	GRCGYC	2 cut(s)	177, 249
BstAFI	CTTAAG	1 cut(s)	1355
BstAUI	TGTACA	1 cut(s)	923
BstC8I	GCNNGC	9 cut(s)	42, 86, 188, 278, 356, 485, 587, 1121, 1932
BstDEI	CTNAG	5 cut(s)	1053, 1521, 1530, 2297, 2316
BstDSI	CCRYGG	3 cut(s)	90, 590, 2166
BstF5I	GGATG	3 cut(s)	1218, 1538, 2035
BstFNI	CGCG	9 cut(s)	38, 107, 109, 153, 186, 375, 485, 560, 1290
BstH2I	RGCGCY	2 cut(s)	8, 193
BstHHI	GCGC	9 cut(s)	7, 40, 109, 155, 192, 485, 487, 562, 1089
BstKTI	GATC	4 cut(s)	775, 1258, 1479, 1537
BstMAI	GTCTC	2 cut(s)	509, 1880
BstMBI	GATC	4 cut(s)	772, 1255, 1476, 1534
BstMCI	CGRYCG	2 cut(s)	430, 590
BstNI	CCWGG	4 cut(s)	742, 1151, 1875, 2082
BstNSI	RCATGY	2 cut(s)	859, 1773
BstSFI	CTRYAG	2 cut(s)	1672, 1905
BstSLI	GKGCMC	3 cut(s)	29, 607, 2005
BstUI	CGCG	9 cut(s)	38, 107, 109, 153, 186, 375, 485, 560, 1290
BstV1I	GCAGC	3 cut(s)	642, 1958, 2129
BstV2I	GAAGAC	1 cut(s)	1320
BstX2I	RGATCY	2 cut(s)	1255, 1534
BstXI	CCANNNNNNTGG	1 cut(s)	2173
BstYI	RGATCY	2 cut(s)	1255, 1534
BstZ17I	GTATAC	1 cut(s)	1141
BstZI	CGGCCG	1 cut(s)	587
Bsu36I	CCTNAGG	1 cut(s)	1053
BsuI	GTATCC	1 cut(s)	1690
BsuRI	GGCC	8 cut(s)	570, 585, 589, 605, 1172, 1670, 1721, 2086
BtgI	CCRYGG	3 cut(s)	90, 590, 2166
BtsCI	GGATG	3 cut(s)	1218, 1538, 2035
BtsIMutI	CAGTG	4 cut(s)	1587, 1809, 1839, 2094
Cac8I	GCNNGC	9 cut(s)	42, 86, 188, 278, 356, 485, 587, 1121, 1932
CaiI	CAGNNNCTG	1 cut(s)	1829
CfoI	GCGC	9 cut(s)	7, 40, 109, 155, 192, 485, 487, 562, 1089
Cfr10I	RCCGGY	2 cut(s)	585, 685
Cfr9I	CCCGGG	1 cut(s)	713
CseI	GACGC	2 cut(s)	257, 364
CsiI	ACCWGGT	1 cut(s)	1149
Csp6I	GTAC	7 cut(s)	325, 469, 502, 924, 1737, 1767, 2282
CviAII	CATG	8 cut(s)	856, 872, 934, 1563, 1770, 1819, 1864, 2328
CviQI	GTAC	7 cut(s)	325, 469, 502, 924, 1737, 1767, 2282
DdeI	CTNAG	5 cut(s)	1053, 1521, 1530, 2297, 2316
DpnI	GATC	4 cut(s)	774, 1257, 1478, 1536
DpnII	GATC	4 cut(s)	772, 1255, 1476, 1534
DriI	GACNNNNNGTC	1 cut(s)	2020
EaeI	YGGCCR	1 cut(s)	587
EagI	CGGCCG	1 cut(s)	587
Eam1104I	CTCTTC	4 cut(s)	886, 1035, 1173, 1501
Eam1105I	GACNNNNNGTC	1 cut(s)	2020
EarI	CTCTTC	4 cut(s)	886, 1035, 1173, 1501
EciI	GGCGGA	2 cut(s)	170, 193
EclXI	CGGCCG	1 cut(s)	587
Eco130I	CCWWGG	2 cut(s)	1407, 2105
Eco147I	AGGCCT	2 cut(s)	1172, 1670
Eco24I	GRGCYC	3 cut(s)	59, 607, 1051
Eco31I	GGTCTC	1 cut(s)	509
Eco47I	GGWCC	5 cut(s)	61, 97, 701, 722, 1815
Eco52I	CGGCCG	1 cut(s)	587
Eco57I	CTGAAG	3 cut(s)	653, 1434, 1527
Eco81I	CCTNAGG	1 cut(s)	1053
Eco88I	CYCGRG	3 cut(s)	52, 397, 713
EcoO109I	RGGNCCY	2 cut(s)	604, 722
EcoRII	CCWGG	4 cut(s)	740, 1149, 1873, 2080
EcoT14I	CCWWGG	2 cut(s)	1407, 2105
EcoT22I	ATGCAT	1 cut(s)	2100
EcoT38I	GRGCYC	3 cut(s)	59, 607, 1051
ErhI	CCWWGG	2 cut(s)	1407, 2105
FaeI	CATG	8 cut(s)	859, 875, 937, 1566, 1773, 1822, 1867, 2331
FaqI	GGGAC	5 cut(s)	708, 1071, 1247, 1822, 1828
FatI	CATG	8 cut(s)	855, 871, 933, 1562, 1769, 1818, 1863, 2327
FauI	CCCGC	2 cut(s)	78, 93
FbaI	TGATCA	1 cut(s)	1476
FblI	GTMKAC	3 cut(s)	930, 1140, 1155
FokI	GGATG	3 cut(s)	1225, 1525, 2042
FriOI	GRGCYC	3 cut(s)	59, 607, 1051
FseI	GGCCGGCC	1 cut(s)	589
FspBI	CTAG	7 cut(s)	351, 1124, 1190, 1485, 2106, 2138, 2270
FspI	TGCGCA	1 cut(s)	1088
GlaI	GCGC	9 cut(s)	6, 39, 108, 154, 191, 484, 486, 561, 1088
GsaI	CCCAGC	1 cut(s)	160
GsuI	CTGGAG	3 cut(s)	59, 391, 1040
HaeII	RGCGCY	2 cut(s)	8, 193
HaeIII	GGCC	8 cut(s)	570, 585, 589, 605, 1172, 1670, 1721, 2086
HgaI	GACGC	2 cut(s)	257, 364
HhaI	GCGC	9 cut(s)	7, 40, 109, 155, 192, 485, 487, 562, 1089
Hin1I	GRCGYC	2 cut(s)	177, 249
Hin1II	CATG	8 cut(s)	859, 875, 937, 1566, 1773, 1822, 1867, 2331
Hin6I	GCGC	9 cut(s)	5, 38, 107, 153, 190, 483, 485, 560, 1087
HinP1I	GCGC	9 cut(s)	5, 38, 107, 153, 190, 483, 485, 560, 1087
HincII	GTYRAC	3 cut(s)	768, 931, 1428
HindII	GTYRAC	3 cut(s)	768, 931, 1428
HphI	GGTGA	6 cut(s)	58, 770, 1427, 1483, 1539, 2273
Hpy188III	TCNNGA	9 cut(s)	76, 397, 408, 776, 1052, 1343, 1743, 1975, 2270
Hpy99I	CGWCG	9 cut(s)	179, 227, 236, 251, 452, 458, 461, 482, 2026
HpyCH4III	ACNGT	8 cut(s)	223, 928, 1066, 1582, 1591, 1612, 1831, 2194
HpyCH4IV	ACGT	3 cut(s)	177, 471, 1430
HpyCH4V	TGCA	7 cut(s)	691, 900, 1400, 1946, 2003, 2098, 2117
HpyF3I	CTNAG	5 cut(s)	1053, 1521, 1530, 2297, 2316
HpySE526I	ACGT	3 cut(s)	177, 471, 1430
Hsp92I	GRCGYC	2 cut(s)	177, 249
Hsp92II	CATG	8 cut(s)	859, 875, 937, 1566, 1773, 1822, 1867, 2331
HspAI	GCGC	9 cut(s)	5, 38, 107, 153, 190, 483, 485, 560, 1087
KflI	GGGWCCC	1 cut(s)	722
Kpn2I	TCCGGA	1 cut(s)	1342
KroI	GCCGGC	1 cut(s)	585
KroNI	GCCGGC	1 cut(s)	587
Ksp22I	TGATCA	1 cut(s)	1476
Kzo9I	GATC	4 cut(s)	772, 1255, 1476, 1534
LmnI	GCTCC	5 cut(s)	78, 546, 547, 1054, 2080
Lsp1109I	GCAGC	3 cut(s)	642, 1958, 2129
LweI	GCATC	5 cut(s)	1497, 1796, 1888, 2020, 2107
MabI	ACCWGGT	1 cut(s)	1149
MaeI	CTAG	7 cut(s)	351, 1124, 1190, 1485, 2106, 2138, 2270
MaeII	ACGT	3 cut(s)	177, 471, 1430
MaeIII	GTNAC	3 cut(s)	1223, 1612, 1825
MalI	GATC	4 cut(s)	774, 1257, 1478, 1536
MbiI	CCGCTC	1 cut(s)	73
MboI	GATC	4 cut(s)	772, 1255, 1476, 1534
MfeI	CAATTG	1 cut(s)	1572
MflI	RGATCY	2 cut(s)	1255, 1534
MhlI	GDGCHC	5 cut(s)	29, 59, 607, 1051, 2005
MluCI	AATT	8 cut(s)	10, 134, 303, 953, 1275, 1572, 1655, 1728
MlyI	GAGTC	4 cut(s)	194, 230, 1882, 1904
MmeI	TCCRAC	4 cut(s)	270, 1833, 2007, 2154
Mph1103I	ATGCAT	1 cut(s)	2100
MroI	TCCGGA	1 cut(s)	1342
MroNI	GCCGGC	1 cut(s)	585
MroXI	GAANNNNTTC	1 cut(s)	638
MseI	TTAA	5 cut(s)	537, 681, 795, 807, 1356
MslI	CAYNNNNRTG	2 cut(s)	1301, 1779
MspA1I	CMGCKG	2 cut(s)	44, 655
MspCI	CTTAAG	1 cut(s)	1355
MunI	CAATTG	1 cut(s)	1572
MvaI	CCWGG	4 cut(s)	742, 1151, 1875, 2082
MvnI	CGCG	9 cut(s)	38, 107, 109, 153, 186, 375, 485, 560, 1290
NaeI	GCCGGC	1 cut(s)	587
NciI	CCSGG	7 cut(s)	59, 309, 362, 545, 699, 714, 715
NdeII	GATC	4 cut(s)	772, 1255, 1476, 1534
NgoMIV	GCCGGC	1 cut(s)	585
NlaIII	CATG	8 cut(s)	859, 875, 937, 1566, 1773, 1822, 1867, 2331
NlaIV	GGNNCC	9 cut(s)	549, 605, 606, 702, 723, 724, 1050, 1536, 1816
NmeAIII	GCCGAG	1 cut(s)	154
NmuCI	GTSAC	1 cut(s)	1223
NsbI	TGCGCA	1 cut(s)	1088
NsiI	ATGCAT	1 cut(s)	2100
NspI	RCATGY	2 cut(s)	859, 1773
PaeR7I	CTCGAG	1 cut(s)	397
PalAI	GGCGCGCC	1 cut(s)	483
PauI	GCGCGC	1 cut(s)	483
PceI	AGGCCT	2 cut(s)	1172, 1670
PcsI	WCGNNNNNNNCGW	6 cut(s)	126, 174, 183, 231, 362, 395
PdiI	GCCGGC	1 cut(s)	587
PdmI	GAANNNNTTC	1 cut(s)	638
PfeI	GAWTC	7 cut(s)	102, 644, 1102, 1385, 1856, 2018, 2225
Pfl23II	CGTACG	1 cut(s)	468
PflFI	GACNNNGTC	2 cut(s)	176, 1160
PfoI	TCCNGGA	1 cut(s)	543
PleI	GAGTC	4 cut(s)	194, 230, 1882, 1904
PpsI	GAGTC	4 cut(s)	194, 230, 1882, 1904
PpuMI	RGGWCCY	1 cut(s)	722
Psp5II	RGGWCCY	1 cut(s)	722
Psp6I	CCWGG	4 cut(s)	740, 1149, 1873, 2080
PspFI	CCCAGC	1 cut(s)	156
PspGI	CCWGG	4 cut(s)	740, 1149, 1873, 2080
PspLI	CGTACG	1 cut(s)	468
PspN4I	GGNNCC	9 cut(s)	549, 605, 606, 702, 723, 724, 1050, 1536, 1816
PspOMI	GGGCCC	1 cut(s)	603
PspPPI	RGGWCCY	1 cut(s)	722
PstNI	CAGNNNCTG	1 cut(s)	1829
PsuI	RGATCY	2 cut(s)	1255, 1534
PsyI	GACNNNGTC	2 cut(s)	176, 1160
PteI	GCGCGC	1 cut(s)	483
PvuII	CAGCTG	1 cut(s)	655
RigI	GGCCGGCC	1 cut(s)	589
RsaI	GTAC	7 cut(s)	326, 470, 503, 925, 1738, 1768, 2283
RsaNI	GTAC	7 cut(s)	325, 469, 502, 924, 1737, 1767, 2282
RseI	CAYNNNNRTG	2 cut(s)	1301, 1779
SalI	GTCGAC	1 cut(s)	929
SaqAI	TTAA	5 cut(s)	537, 681, 795, 807, 1356
Sau3AI	GATC	4 cut(s)	772, 1255, 1476, 1534
ScaI	AGTACT	1 cut(s)	326
SchI	GAGTC	4 cut(s)	194, 230, 1882, 1904
SduI	GDGCHC	5 cut(s)	29, 59, 607, 1051, 2005
SexAI	ACCWGGT	1 cut(s)	1149
SfaNI	GCATC	5 cut(s)	1497, 1796, 1888, 2020, 2107
SfcI	CTRYAG	2 cut(s)	1672, 1905
Sfr274I	CTCGAG	1 cut(s)	397
SgsI	GGCGCGCC	1 cut(s)	483
SinI	GGWCC	5 cut(s)	61, 97, 701, 722, 1815
SlaI	CTCGAG	1 cut(s)	397
SmaI	CCCGGG	1 cut(s)	715
SmiMI	CAYNNNNRTG	2 cut(s)	1301, 1779
SmlI	CTYRAG	4 cut(s)	292, 397, 991, 1355
SmoI	CTYRAG	4 cut(s)	292, 397, 991, 1355
SpeI	ACTAGT	1 cut(s)	1189
Sse9I	AATT	8 cut(s)	10, 134, 303, 953, 1275, 1572, 1655, 1728
SseBI	AGGCCT	2 cut(s)	1172, 1670
SspI	AATATT	1 cut(s)	868
SspMI	CTAG	7 cut(s)	351, 1124, 1190, 1485, 2106, 2138, 2270
StuI	AGGCCT	2 cut(s)	1172, 1670
StyI	CCWWGG	2 cut(s)	1407, 2105
TaaI	ACNGT	8 cut(s)	223, 928, 1066, 1582, 1591, 1612, 1831, 2194
TaiI	ACGT	3 cut(s)	180, 474, 1433
TaqI	TCGA	8 cut(s)	168, 198, 398, 426, 477, 642, 930, 2101
TaqII	GACCGA	1 cut(s)	785
TasI	AATT	8 cut(s)	10, 134, 303, 953, 1275, 1572, 1655, 1728
TatI	WGTACW	5 cut(s)	324, 501, 923, 1736, 1766
TfiI	GAWTC	7 cut(s)	102, 644, 1102, 1385, 1856, 2018, 2225
Tru1I	TTAA	5 cut(s)	537, 681, 795, 807, 1356
Tru9I	TTAA	5 cut(s)	537, 681, 795, 807, 1356
TscAI	CASTG	4 cut(s)	1594, 1809, 1846, 2094
TseFI	GTSAC	1 cut(s)	1223
TseI	GCWGC	3 cut(s)	655, 1946, 2117
Tsp45I	GTSAC	1 cut(s)	1223
TspDTI	ATGAA	9 cut(s)	273, 636, 860, 1229, 1620, 1662, 1679, 1797, 2322
TspGWI	ACGGA	3 cut(s)	107, 436, 2183
TspMI	CCCGGG	1 cut(s)	713
TspRI	CASTG	4 cut(s)	1594, 1809, 1846, 2094
Tth111I	GACNNNGTC	2 cut(s)	176, 1160
Vha464I	CTTAAG	1 cut(s)	1355
VneI	GTGCAC	1 cut(s)	2001
VpaK11BI	GGWCC	5 cut(s)	61, 97, 701, 722, 1815
XapI	RAATTY	2 cut(s)	10, 134
XbaI	TCTAGA	1 cut(s)	2269
XceI	RCATGY	2 cut(s)	859, 1773
XhoI	CTCGAG	1 cut(s)	397
XmaI	CCCGGG	1 cut(s)	713
XmaJI	CCTAGG	1 cut(s)	2105
XmiI	GTMKAC	3 cut(s)	930, 1140, 1155
XmnI	GAANNNNTTC	1 cut(s)	638
XspI	CTAG	7 cut(s)	351, 1124, 1190, 1485, 2106, 2138, 2270
ZraI	GACGTC	1 cut(s)	178
ZrmI	AGTACT	1 cut(s)	326
Zsp2I	ATGCAT	1 cut(s)	2100

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.