Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0013996

Physical Location & Seq

Genomic Coordinates Reverse (-)

4847214 .. 4850367

Gene Structure 3154 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000016223

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2487 bp

ATGGCGCTAAATTTGCCGACTTCGTGCCCCATTTTCGCGCCACCGGTGAACCCGAACCCGGCCCACAACCCGCTCCAGAACCGCCCGCCCACGGAGGTCCGATTCGCGCGGTGGAACAACGCCAACGCCGAGAAATTCAACCAGCGCCGCCGCGCCCAGCAAGAAATCGAGGACGACGTCCGCCGCGAGCGCCGCTTCGACTCCGCCACCAGAATCGCCGCCGACGTTTCCTCCTCCGACGCCGAAGCAACATTCAAATCCATAGGCACGCCTTCGTCTCCCTCAAGCCCTTCAATTCCCGGCAGAAAATCCAAGTACTCCAAGAACCCTAGCTCGCACCCGGCGTTTCGCCGAGTCATCAGACCCACGAAGCTCTCGAGTATCGCCAGAGAGAAGCCGGAAATCGACCGGAAAGCCAACATCTCCGTCGGCGACGACGGGCTTTCGTACGTCATCGACGGCGCGCCGTTTGAGTTCAAGTACAGCTACACCGAGACCCCGAAGCAGAAGCCCATTAAGCTCCGGGAGCCGCCCTACGCGCCGTTCGGCCCAACCACGATGGGCCGGCCGTGGACGGGTCGGGCCCCATTGCCTCCGAGCAAGAAGAAACTGAAGGAGTTCGATTCGTTCCAGCTCCCGCCGCCGCATAAGAAAGGGGTTAAGCCGGTGCAGTCGCCGGGTCCGTATTTACCCGGGTCGGGTCCCAAGTATGTCAAGTCCAGGGAGGAGATATTGGGTGAGCCGTTGACCGATCATGAAGTCAAAGACTTGGTTAATAGCTGTGTTAAGACCAGAAGGCAACTCAATATGGGTAGAGATGGATTGACACACAACATGCTGGATAATATTCATGCTCATTGGAAGCGGCGGAGAGTCTGCAAGATAAAATGTAAAGGGGTGTGTACAGTCGACATGGAAAATGTGTGCCAGCAATTAGAGGAAAGAACTGGAGGGAAAATCATTTATAGAAGAGGTGGGGTGATTTTTCTTTTCCGGGGGAGAAACTACAACTATAAAACTCGGCCGCGGTTTCCTCTCATGCTTTGGAGACCTATCACTCCTGTGTATCCTAGATTGATTCAGAGGGCTCCTGAGGGACTAACAGTTGAAGAAGCGACTGAAATGCGCAAGAAGGGGAGGAATCTGATACCAATACGCAAGCTAGGAAAAAATGGAGTATACTCTGACCTGGTAGACAATGTCAGAGAGGCCTTTGAAGAGTGTGAACTAGTACGAATAGATTGTCAAGGGATGAATGGGAGTGACTACCGAAAAATAGGTGCTAAACTAAAGGATCTTGTCCCTTGTGTGCTAATTTCCTTTGAACGCGAGAACATTCTTGTGTGGAGAGGACGGGAATGGAAGTCTTCTTTCCTAAATCCGGAGAGTAATCTTAAGGAAGTCAAAGAATCTGATGTTGATGATTCACCTTCTATTGCACCTTCCTTGGAAGGTGAAGAAGCATCGACGTTATGTGCTTTTACAGCTTCAGTCAATGACGAAAATCCTCAAATGATTGACACTAGTATCACCTCTTCAAGTTCTGAAGTTGTGGGTGCTGAGGGAACTGAGGATCCATCCCCTTCACCATATATTGAGCCATGTGCCACAATTGATATAGTTTCCACTGTGGGAGGCACTTATGAAACTGTAAGCATCTCGGACATCAAAGGCTTTAGAAATGATGAAGCAGAATTGGAAATGAGGGCCTATAGCAGTTCAACCATACCACAGGATACCAGGTATGCTCATGATGAGGCAGAAACGATTTCCATCTCAGACATCAAGGGCTTTAGAAATGATGAAGCAGAATTGGAAATGAAGGCCTATAGCAGTTCAACCTTACCGCAGGATACCAGCTATGCTGATGACGAGGCCAAAACAATTTCCAGTACATCTGGAACTGAAAACATATTGGATAGTACATGCCATACTGATGAAGCATCAGCAACTACATCAGTGGGGACTGGGACCATGCCAGTGACTGTTGAAAGCACTGAAACGAAGTTGGATTCCCTCATGGTTGCCCCTGGTAGTAATGAGACTCCACAAGATGCTTCTATAGACTCGCAAAATCTCAATGAGCAAGCAAGGTTGAGTGCAGCCTGTAAAGAGAAGGTGCTATCACTCTTGAACGAAGCTGTTGGGAGTGGGAGCGCACTTATTTTAGACGATTTGTCGTTGGATGCTGACATCATATATCAGAGGGCAGTTTCTCTCGCCAAGTCTGCTCCACCTGGGCCAGTGTTTAAGCATCGACCTAGGAGAGTTGCAGCTCAAATGAGTAAGAAGCTAGTAGTAAGAAAACAGAAGCAAGAAGCCACAGAGTTGGAAGTGAAAGAGATAACAGTTTATGCGAAGGGGGGCAGTGAGAAGAAGGATTCCAAAGTTCACAGAACAAAAACAGGAGATTTTGGTGAACCTCTAGATAGCATTGTACCACAGGGAAGCCTGAGAGTTGATGAACTTGCTAAGCTATTGGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000373 GO:0000375 GO:0000377 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRS1_YhbY

Protein Analysis

829

Amino Acids

91.75

Weight (kDa)

7.82

Isoelectric Point (pI)

51.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CRS1_YhbY	PF01985	249 - 332	1.5e-20	CRS1 / YhbY (CRM) domain
CRS1_YhbY	PF01985	367 - 450	1.4e-16	CRS1 / YhbY (CRM) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013996)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20020
fragaria_vesca	FvH4_1g05780
malus_domestica	MD02G1059500.v1.1 MD15G1193500.v1.1
prunus_persica	Prupe.7G223600_v2.0.a1
pyrus_communis	pycom02g04850 pycom15g17320
rosa_chinensis	RchiOBHm_Chr2g0091431
rosa_laevigata	RLG00000016223
rosa_multiflora	Rmu_ssc0000333.1_g000008
rosa_roxburghii	Rroxscaffold_2G00150090
rosa_rugosa	Rorug02G0017800
rosa_samantha	Rh2AG062700 Rh2BG062000 Rh2CG063900 Rh2DG062300
rosa_wichuraiana	Rw2G005740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	180
Acc16I	TGCGCA	1 cut(s)	1127
AccBSI	CCGCTC	1 cut(s)	73
AccI	GTMKAC	3 cut(s)	909, 1179, 1194
AccII	CGCG	9 cut(s)	38, 107, 109, 153, 186, 464, 539, 1027, 1329
AccIII	TCCGGA	1 cut(s)	1381
AclWI	GGATC	3 cut(s)	1302, 1568, 1581
AcoI	YGGCCR	2 cut(s)	566, 1022
AcsI	RAATTY	2 cut(s)	10, 134
AcuI	CTGAAG	3 cut(s)	632, 1473, 1566
AcyI	GRCGYC	2 cut(s)	177, 240
AfaI	GTAC	8 cut(s)	317, 449, 482, 904, 1233, 1894, 1924, 2439
AfiI	CCNNNNNNNGG	5 cut(s)	58, 91, 575, 698, 1381
AflII	CTTAAG	1 cut(s)	1394
AgeI	ACCGGT	1 cut(s)	43
AhdI	GACNNNNNGTC	1 cut(s)	2176
AhlI	ACTAGT	2 cut(s)	1228, 1523
AjnI	CCWGG	5 cut(s)	719, 1188, 1739, 2029, 2236
AleI	CACNNNNGTG	1 cut(s)	1061
AloI	GAACNNNNNNTCC	2 cut(s)	1558, 1590
Alw26I	GTCTC	4 cut(s)	282, 488, 1042, 2036
AlwI	GGATC	3 cut(s)	1302, 1568, 1581
AlwNI	CAGNNNCTG	1 cut(s)	1985
Ama87I	CYCGRG	2 cut(s)	376, 692
Aor13HI	TCCGGA	1 cut(s)	1381
ApaI	GGGCCC	1 cut(s)	586
ApeKI	GCWGC	2 cut(s)	2102, 2273
ApoI	RAATTY	2 cut(s)	10, 134
ArsI	GACNNNNNNTTYG	2 cut(s)	1228, 1260
AscI	GGCGCGCC	1 cut(s)	462
AsiGI	ACCGGT	1 cut(s)	43
Asp700I	GAANNNNTTC	1 cut(s)	617
AspA2I	CCTAGG	1 cut(s)	2261
AsuC2I	CCSGG	8 cut(s)	59, 300, 341, 524, 678, 693, 694, 995
AsuHPI	GGTGA	8 cut(s)	58, 749, 991, 1419, 1466, 1522, 1578, 2429
AvaI	CYCGRG	2 cut(s)	376, 692
AvaII	GGWCC	4 cut(s)	97, 680, 701, 1971
AvrII	CCTAGG	1 cut(s)	2261
AxyI	CCTNAGG	1 cut(s)	1092
BaeGI	GKGCMC	2 cut(s)	29, 586
BaeI	ACNNNNGTAYC	2 cut(s)	1510, 1543
BamHI	GGATCC	1 cut(s)	1573
BanII	GRGCYC	2 cut(s)	586, 1090
BarI	GAAGNNNNNNTAC	2 cut(s)	1519, 1551
BbsI	GAAGAC	1 cut(s)	1359
BbvCI	CCTCAGC	1 cut(s)	1560
BbvI	GCAGC	2 cut(s)	2114, 2285
BccI	CCATC	4 cut(s)	553, 812, 1585, 1781
BceAI	ACGGC	5 cut(s)	451, 475, 526, 553, 727
BcgI	CGANNNNNNTGC	2 cut(s)	1105, 1139
BciT130I	CCWGG	5 cut(s)	721, 1190, 1741, 2031, 2238
BciVI	GTATCC	3 cut(s)	1077, 1729, 1846
BcnI	CCSGG	8 cut(s)	59, 300, 341, 524, 678, 693, 694, 995
BcoDI	GTCTC	4 cut(s)	282, 488, 1042, 2036
BcuI	ACTAGT	2 cut(s)	1228, 1523
BfaI	CTAG	8 cut(s)	330, 1071, 1163, 1229, 1524, 2262, 2294, 2426
BfmI	CTRYAG	3 cut(s)	1711, 1828, 2061
BfoI	RGCGCY	3 cut(s)	8, 148, 193
BfrI	CTTAAG	1 cut(s)	1394
BfuI	GTATCC	3 cut(s)	1077, 1729, 1846
BlnI	CCTAGG	1 cut(s)	2261
BlpI	GCTNAGC	1 cut(s)	2472
BmcAI	AGTACT	1 cut(s)	317
Bme18I	GGWCC	4 cut(s)	97, 680, 701, 1971
BmeRI	GACNNNNNGTC	1 cut(s)	2176
BmeT110I	CYCGRG	2 cut(s)	376, 692
BmiI	GGNNCC	9 cut(s)	528, 584, 585, 681, 702, 703, 1089, 1575, 1972
BmrI	ACTGGG	1 cut(s)	1977
BmsI	GCATC	6 cut(s)	1472, 1665, 1952, 2044, 2176, 2263
BmuI	ACTGGG	1 cut(s)	1977
BpiI	GAAGAC	1 cut(s)	1359
BpmI	CTGGAG	2 cut(s)	59, 969
Bpu10I	CCTNAGC	1 cut(s)	1560
Bpu1102I	GCTNAGC	1 cut(s)	2472
BpuEI	CTTGAG	1 cut(s)	268
BpuMI	CCSGG	8 cut(s)	59, 300, 341, 524, 678, 693, 694, 995
BsaBI	GATNNNNATC	1 cut(s)	1772
BsaHI	GRCGYC	2 cut(s)	177, 240
BsaI	GGTCTC	2 cut(s)	488, 1042
BsaWI	WCCGGW	3 cut(s)	43, 408, 1381
BsaXI	ACNNNNNCTCC	2 cut(s)	215, 245
Bsc4I	CCNNNNNNNGG	5 cut(s)	58, 91, 575, 698, 1381
Bse118I	RCCGGY	3 cut(s)	43, 564, 664
Bse1I	ACTGG	5 cut(s)	952, 1890, 1972, 1979, 2243
Bse21I	CCTNAGG	1 cut(s)	1092
Bse3DI	GCAATG	1 cut(s)	587
Bse8I	GATNNNNATC	1 cut(s)	1772
BseAI	TCCGGA	1 cut(s)	1381
BseBI	CCWGG	5 cut(s)	721, 1190, 1741, 2031, 2238
BseGI	GGATG	3 cut(s)	1257, 1577, 2191
BseJI	GATNNNNATC	1 cut(s)	1772
BseLI	CCNNNNNNNGG	5 cut(s)	58, 91, 575, 698, 1381
BseMI	GCAATG	1 cut(s)	587
BseMII	CTCAG	5 cut(s)	1083, 1551, 1560, 1791, 2444
BseNI	ACTGG	5 cut(s)	952, 1890, 1972, 1979, 2243
BsePI	GCGCGC	1 cut(s)	462
BseRI	GAGGAG	2 cut(s)	223, 740
BseSI	GKGCMC	2 cut(s)	29, 586
BseX3I	CGGCCG	2 cut(s)	566, 1022
BseXI	GCAGC	2 cut(s)	2114, 2285
BseYI	CCCAGC	1 cut(s)	156
BsgI	GTGCAG	2 cut(s)	689, 2121
Bsh1236I	CGCG	9 cut(s)	38, 107, 109, 153, 186, 464, 539, 1027, 1329
Bsh1285I	CGRYCG	3 cut(s)	409, 569, 1025
BshTI	ACCGGT	1 cut(s)	43
BsiEI	CGRYCG	3 cut(s)	409, 569, 1025
BsiHKCI	CYCGRG	2 cut(s)	376, 692
BsiWI	CGTACG	1 cut(s)	447
BslFI	GGGAC	5 cut(s)	687, 1110, 1286, 1978, 1984
BslI	CCNNNNNNNGG	5 cut(s)	58, 91, 575, 698, 1381
BsmAI	GTCTC	4 cut(s)	282, 488, 1042, 2036
BsmBI	CGTCTC	1 cut(s)	282
BsmFI	GGGAC	5 cut(s)	687, 1110, 1286, 1978, 1984
Bso31I	GGTCTC	2 cut(s)	488, 1042
BsoBI	CYCGRG	2 cut(s)	376, 692
Bsp120I	GGGCCC	1 cut(s)	582
Bsp1286I	GDGCHC	3 cut(s)	29, 586, 1090
Bsp13I	TCCGGA	1 cut(s)	1381
Bsp1407I	TGTACA	1 cut(s)	902
Bsp143I	GATC	3 cut(s)	751, 1294, 1573
Bsp1720I	GCTNAGC	1 cut(s)	2472
BspCNI	CTCAG	5 cut(s)	1084, 1552, 1561, 1790, 2445
BspEI	TCCGGA	1 cut(s)	1381
BspFNI	CGCG	9 cut(s)	38, 107, 109, 153, 186, 464, 539, 1027, 1329
BspHI	TCATGA	2 cut(s)	754, 1750
BspLI	GGNNCC	9 cut(s)	528, 584, 585, 681, 702, 703, 1089, 1575, 1972
BspPI	GGATC	3 cut(s)	1302, 1568, 1581
BspTI	CTTAAG	1 cut(s)	1394
BspTNI	GGTCTC	2 cut(s)	488, 1042
BsrBI	CCGCTC	1 cut(s)	73
BsrDI	GCAATG	1 cut(s)	587
BsrFI	RCCGGY	3 cut(s)	43, 564, 664
BsrGI	TGTACA	1 cut(s)	902
BsrI	ACTGG	5 cut(s)	952, 1890, 1972, 1979, 2243
BssAI	RCCGGY	3 cut(s)	43, 564, 664
BssHII	GCGCGC	1 cut(s)	462
BssMI	GATC	3 cut(s)	751, 1294, 1573
BssNAI	GTATAC	1 cut(s)	1180
BssNI	GRCGYC	2 cut(s)	177, 240
BssT1I	CCWWGG	2 cut(s)	1446, 2261
Bst1107I	GTATAC	1 cut(s)	1180
Bst2UI	CCWGG	5 cut(s)	721, 1190, 1741, 2031, 2238
Bst4CI	ACNGT	6 cut(s)	907, 1105, 1630, 1651, 1987, 2350
Bst6I	CTCTTC	3 cut(s)	964, 1212, 1540
BstACI	GRCGYC	2 cut(s)	177, 240
BstAFI	CTTAAG	1 cut(s)	1394
BstAUI	TGTACA	1 cut(s)	902
BstC8I	GCNNGC	9 cut(s)	86, 188, 269, 335, 464, 566, 929, 1160, 2088
BstDEI	CTNAG	6 cut(s)	1092, 1560, 1569, 1777, 2453, 2472
BstDSI	CCRYGG	3 cut(s)	90, 569, 1025
BstF5I	GGATG	3 cut(s)	1257, 1577, 2191
BstFNI	CGCG	9 cut(s)	38, 107, 109, 153, 186, 464, 539, 1027, 1329
BstH2I	RGCGCY	3 cut(s)	8, 148, 193
BstKTI	GATC	3 cut(s)	754, 1297, 1576
BstMAI	GTCTC	4 cut(s)	282, 488, 1042, 2036
BstMBI	GATC	3 cut(s)	751, 1294, 1573
BstMCI	CGRYCG	3 cut(s)	409, 569, 1025
BstMWI	GCNNNNNNNGC	9 cut(s)	13, 189, 192, 517, 526, 538, 640, 1484, 2228
BstNI	CCWGG	5 cut(s)	721, 1190, 1741, 2031, 2238
BstNSI	RCATGY	2 cut(s)	838, 1929
BstSFI	CTRYAG	3 cut(s)	1711, 1828, 2061
BstSLI	GKGCMC	2 cut(s)	29, 586
BstUI	CGCG	9 cut(s)	38, 107, 109, 153, 186, 464, 539, 1027, 1329
BstV1I	GCAGC	2 cut(s)	2114, 2285
BstV2I	GAAGAC	1 cut(s)	1359
BstX2I	RGATCY	2 cut(s)	1294, 1573
BstXI	CCANNNNNNTGG	1 cut(s)	2329
BstYI	RGATCY	2 cut(s)	1294, 1573
BstZ17I	GTATAC	1 cut(s)	1180
BstZI	CGGCCG	2 cut(s)	566, 1022
Bsu36I	CCTNAGG	1 cut(s)	1092
BsuI	GTATCC	3 cut(s)	1077, 1729, 1846
BtgI	CCRYGG	3 cut(s)	90, 569, 1025
BtsCI	GGATG	3 cut(s)	1257, 1577, 2191
BtsI	GCAGTG	1 cut(s)	2374
BtsIMutI	CAGTG	6 cut(s)	1626, 1965, 1986, 1995, 2250, 2374
Cac8I	GCNNGC	9 cut(s)	86, 188, 269, 335, 464, 566, 929, 1160, 2088
CaiI	CAGNNNCTG	1 cut(s)	1985
CciI	TCATGA	2 cut(s)	754, 1750
Cfr10I	RCCGGY	3 cut(s)	43, 564, 664
Cfr42I	CCGCGG	1 cut(s)	1028
Cfr9I	CCCGGG	1 cut(s)	692
CseI	GACGC	1 cut(s)	248
CsiI	ACCWGGT	2 cut(s)	1188, 1739
Csp6I	GTAC	8 cut(s)	316, 448, 481, 903, 1232, 1893, 1923, 2438
CspAI	ACCGGT	1 cut(s)	43
CviQI	GTAC	8 cut(s)	316, 448, 481, 903, 1232, 1893, 1923, 2438
DdeI	CTNAG	6 cut(s)	1092, 1560, 1569, 1777, 2453, 2472
DpnI	GATC	3 cut(s)	753, 1296, 1575
DpnII	GATC	3 cut(s)	751, 1294, 1573
DriI	GACNNNNNGTC	1 cut(s)	2176
EaeI	YGGCCR	2 cut(s)	566, 1022
EagI	CGGCCG	2 cut(s)	566, 1022
Eam1104I	CTCTTC	3 cut(s)	964, 1212, 1540
Eam1105I	GACNNNNNGTC	1 cut(s)	2176
EarI	CTCTTC	3 cut(s)	964, 1212, 1540
EciI	GGCGGA	3 cut(s)	170, 193, 883
EclXI	CGGCCG	2 cut(s)	566, 1022
Eco130I	CCWWGG	2 cut(s)	1446, 2261
Eco147I	AGGCCT	2 cut(s)	1211, 1826
Eco24I	GRGCYC	2 cut(s)	586, 1090
Eco31I	GGTCTC	2 cut(s)	488, 1042
Eco47I	GGWCC	4 cut(s)	97, 680, 701, 1971
Eco52I	CGGCCG	2 cut(s)	566, 1022
Eco57I	CTGAAG	3 cut(s)	632, 1473, 1566
Eco81I	CCTNAGG	1 cut(s)	1092
Eco88I	CYCGRG	2 cut(s)	376, 692
EcoO109I	RGGNCCY	3 cut(s)	583, 701, 1707
EcoRII	CCWGG	5 cut(s)	719, 1188, 1739, 2029, 2236
EcoT14I	CCWWGG	2 cut(s)	1446, 2261
EcoT38I	GRGCYC	2 cut(s)	586, 1090
ErhI	CCWWGG	2 cut(s)	1446, 2261
Esp3I	CGTCTC	1 cut(s)	282
FaqI	GGGAC	5 cut(s)	687, 1110, 1286, 1978, 1984
FauI	CCCGC	3 cut(s)	78, 93, 645
FblI	GTMKAC	3 cut(s)	909, 1179, 1194
FokI	GGATG	3 cut(s)	1264, 1564, 2198
FriOI	GRGCYC	2 cut(s)	586, 1090
FseI	GGCCGGCC	1 cut(s)	568
FspBI	CTAG	8 cut(s)	330, 1071, 1163, 1229, 1524, 2262, 2294, 2426
FspI	TGCGCA	1 cut(s)	1127
GsaI	CCCAGC	1 cut(s)	160
GsuI	CTGGAG	2 cut(s)	59, 969
HaeII	RGCGCY	3 cut(s)	8, 148, 193
HgaI	GACGC	1 cut(s)	248
Hin1I	GRCGYC	2 cut(s)	177, 240
HincII	GTYRAC	2 cut(s)	747, 910
HindII	GTYRAC	2 cut(s)	747, 910
HphI	GGTGA	8 cut(s)	58, 749, 991, 1419, 1466, 1522, 1578, 2429
Hpy188III	TCNNGA	9 cut(s)	76, 376, 755, 1091, 1382, 1751, 1899, 2131, 2426
Hpy99I	CGWCG	8 cut(s)	179, 227, 242, 431, 437, 440, 461, 1471
HpyCH4III	ACNGT	6 cut(s)	907, 1105, 1630, 1651, 1987, 2350
HpyCH4IV	ACGT	4 cut(s)	177, 225, 450, 1469
HpyCH4V	TGCA	5 cut(s)	670, 879, 1439, 2102, 2273
HpyF10VI	GCNNNNNNNGC	9 cut(s)	13, 189, 192, 517, 526, 538, 640, 1484, 2228
HpyF3I	CTNAG	6 cut(s)	1092, 1560, 1569, 1777, 2453, 2472
HpySE526I	ACGT	4 cut(s)	177, 225, 450, 1469
Hsp92I	GRCGYC	2 cut(s)	177, 240
KflI	GGGWCCC	1 cut(s)	701
Kpn2I	TCCGGA	1 cut(s)	1381
KroI	GCCGGC	1 cut(s)	564
KroNI	GCCGGC	1 cut(s)	566
KspI	CCGCGG	1 cut(s)	1028
Kzo9I	GATC	3 cut(s)	751, 1294, 1573
LmnI	GCTCC	7 cut(s)	78, 525, 526, 639, 1093, 2154, 2236
Lsp1109I	GCAGC	2 cut(s)	2114, 2285
LweI	GCATC	6 cut(s)	1472, 1665, 1952, 2044, 2176, 2263
MabI	ACCWGGT	2 cut(s)	1188, 1739
MaeI	CTAG	8 cut(s)	330, 1071, 1163, 1229, 1524, 2262, 2294, 2426
MaeII	ACGT	4 cut(s)	177, 225, 450, 1469
MaeIII	GTNAC	2 cut(s)	1262, 1981
MalI	GATC	3 cut(s)	753, 1296, 1575
MbiI	CCGCTC	1 cut(s)	73
MboI	GATC	3 cut(s)	751, 1294, 1573
MboII	GAAGA	8 cut(s)	616, 981, 1121, 1229, 1359, 1469, 1527, 2386
MfeI	CAATTG	1 cut(s)	1611
MflI	RGATCY	2 cut(s)	1294, 1573
MhlI	GDGCHC	3 cut(s)	29, 586, 1090
MluCI	AATT	9 cut(s)	10, 134, 294, 932, 1314, 1611, 1694, 1811, 1884
MlyI	GAGTC	5 cut(s)	194, 363, 882, 2038, 2060
MmeI	TCCRAC	4 cut(s)	261, 1989, 2163, 2310
MroI	TCCGGA	1 cut(s)	1381
MroNI	GCCGGC	1 cut(s)	564
MroXI	GAANNNNTTC	1 cut(s)	617
MseI	TTAA	6 cut(s)	516, 660, 774, 786, 1395, 2250
MslI	CAYNNNNRTG	4 cut(s)	1061, 1340, 1935, 1979
MspA1I	CMGCKG	1 cut(s)	1027
MspCI	CTTAAG	1 cut(s)	1394
MunI	CAATTG	1 cut(s)	1611
MvaI	CCWGG	5 cut(s)	721, 1190, 1741, 2031, 2238
MvnI	CGCG	9 cut(s)	38, 107, 109, 153, 186, 464, 539, 1027, 1329
MwoI	GCNNNNNNNGC	9 cut(s)	13, 189, 192, 517, 526, 538, 640, 1484, 2228
NaeI	GCCGGC	1 cut(s)	566
NciI	CCSGG	8 cut(s)	59, 300, 341, 524, 678, 693, 694, 995
NdeII	GATC	3 cut(s)	751, 1294, 1573
NgoMIV	GCCGGC	1 cut(s)	564
NlaIV	GGNNCC	9 cut(s)	528, 584, 585, 681, 702, 703, 1089, 1575, 1972
NmeAIII	GCCGAG	3 cut(s)	154, 377, 1000
NmuCI	GTSAC	2 cut(s)	1262, 1981
NsbI	TGCGCA	1 cut(s)	1127
NspI	RCATGY	2 cut(s)	838, 1929
OliI	CACNNNNGTG	1 cut(s)	1061
PaeR7I	CTCGAG	1 cut(s)	376
PagI	TCATGA	2 cut(s)	754, 1750
PalAI	GGCGCGCC	1 cut(s)	462
PauI	GCGCGC	1 cut(s)	462
PceI	AGGCCT	2 cut(s)	1211, 1826
PcsI	WCGNNNNNNNCGW	7 cut(s)	126, 174, 183, 222, 341, 374, 680
PdiI	GCCGGC	1 cut(s)	566
PdmI	GAANNNNTTC	1 cut(s)	617
PfeI	GAWTC	9 cut(s)	102, 213, 623, 1078, 1141, 1409, 1424, 2012, 2381
Pfl23II	CGTACG	1 cut(s)	447
PflFI	GACNNNGTC	2 cut(s)	176, 1199
PfoI	TCCNGGA	1 cut(s)	522
PinAI	ACCGGT	1 cut(s)	43
PleI	GAGTC	5 cut(s)	194, 362, 881, 2038, 2060
PpsI	GAGTC	5 cut(s)	194, 362, 881, 2038, 2060
PpuMI	RGGWCCY	1 cut(s)	701
Psp5II	RGGWCCY	1 cut(s)	701
Psp6I	CCWGG	5 cut(s)	719, 1188, 1739, 2029, 2236
PspFI	CCCAGC	1 cut(s)	156
PspGI	CCWGG	5 cut(s)	719, 1188, 1739, 2029, 2236
PspLI	CGTACG	1 cut(s)	447
PspN4I	GGNNCC	9 cut(s)	528, 584, 585, 681, 702, 703, 1089, 1575, 1972
PspOMI	GGGCCC	1 cut(s)	582
PspPPI	RGGWCCY	1 cut(s)	701
PstNI	CAGNNNCTG	1 cut(s)	1985
PsuI	RGATCY	2 cut(s)	1294, 1573
PsyI	GACNNNGTC	2 cut(s)	176, 1199
PteI	GCGCGC	1 cut(s)	462
RigI	GGCCGGCC	1 cut(s)	568
RsaI	GTAC	8 cut(s)	317, 449, 482, 904, 1233, 1894, 1924, 2439
RsaNI	GTAC	8 cut(s)	316, 448, 481, 903, 1232, 1893, 1923, 2438
RseI	CAYNNNNRTG	4 cut(s)	1061, 1340, 1935, 1979
SacII	CCGCGG	1 cut(s)	1028
SalI	GTCGAC	1 cut(s)	908
SaqAI	TTAA	6 cut(s)	516, 660, 774, 786, 1395, 2250
Sau3AI	GATC	3 cut(s)	751, 1294, 1573
ScaI	AGTACT	1 cut(s)	317
SchI	GAGTC	5 cut(s)	194, 363, 882, 2038, 2060
SduI	GDGCHC	3 cut(s)	29, 586, 1090
SexAI	ACCWGGT	2 cut(s)	1188, 1739
SfaNI	GCATC	6 cut(s)	1472, 1665, 1952, 2044, 2176, 2263
SfcI	CTRYAG	3 cut(s)	1711, 1828, 2061
Sfr274I	CTCGAG	1 cut(s)	376
Sfr303I	CCGCGG	1 cut(s)	1028
SgrAI	CRCCGGYG	1 cut(s)	43
SgrBI	CCGCGG	1 cut(s)	1028
SgsI	GGCGCGCC	1 cut(s)	462
SinI	GGWCC	4 cut(s)	97, 680, 701, 1971
SlaI	CTCGAG	1 cut(s)	376
SmaI	CCCGGG	1 cut(s)	694
SmiMI	CAYNNNNRTG	4 cut(s)	1061, 1340, 1935, 1979
SmlI	CTYRAG	3 cut(s)	283, 376, 1394
SmoI	CTYRAG	3 cut(s)	283, 376, 1394
SpeI	ACTAGT	2 cut(s)	1228, 1523
Sse9I	AATT	9 cut(s)	10, 134, 294, 932, 1314, 1611, 1694, 1811, 1884
SseBI	AGGCCT	2 cut(s)	1211, 1826
SspI	AATATT	1 cut(s)	847
SspMI	CTAG	8 cut(s)	330, 1071, 1163, 1229, 1524, 2262, 2294, 2426
StuI	AGGCCT	2 cut(s)	1211, 1826
StyI	CCWWGG	2 cut(s)	1446, 2261
TaaI	ACNGT	6 cut(s)	907, 1105, 1630, 1651, 1987, 2350
TaiI	ACGT	4 cut(s)	180, 228, 453, 1472
TaqI	TCGA	9 cut(s)	168, 198, 377, 405, 456, 621, 909, 1466, 2257
TaqII	GACCGA	1 cut(s)	764
TasI	AATT	9 cut(s)	10, 134, 294, 932, 1314, 1611, 1694, 1811, 1884
TatI	WGTACW	5 cut(s)	315, 480, 902, 1892, 1922
TfiI	GAWTC	9 cut(s)	102, 213, 623, 1078, 1141, 1409, 1424, 2012, 2381
Tru1I	TTAA	6 cut(s)	516, 660, 774, 786, 1395, 2250
Tru9I	TTAA	6 cut(s)	516, 660, 774, 786, 1395, 2250
TscAI	CASTG	6 cut(s)	1633, 1965, 1986, 2002, 2250, 2374
TseFI	GTSAC	2 cut(s)	1262, 1981
TseI	GCWGC	2 cut(s)	2102, 2273
Tsp45I	GTSAC	2 cut(s)	1262, 1981
TspDTI	ATGAA	9 cut(s)	771, 839, 1268, 1659, 1701, 1818, 1835, 1953, 2478
TspGWI	ACGGA	3 cut(s)	107, 415, 672
TspMI	CCCGGG	1 cut(s)	692
TspRI	CASTG	6 cut(s)	1633, 1965, 1986, 2002, 2250, 2374
Tth111I	GACNNNGTC	2 cut(s)	176, 1199
Vha464I	CTTAAG	1 cut(s)	1394
VpaK11BI	GGWCC	4 cut(s)	97, 680, 701, 1971
XapI	RAATTY	2 cut(s)	10, 134
XbaI	TCTAGA	1 cut(s)	2425
XceI	RCATGY	2 cut(s)	838, 1929
XhoI	CTCGAG	1 cut(s)	376
XmaI	CCCGGG	1 cut(s)	692
XmaJI	CCTAGG	1 cut(s)	2261
XmiI	GTMKAC	3 cut(s)	909, 1179, 1194
XmnI	GAANNNNTTC	1 cut(s)	617
XspI	CTAG	8 cut(s)	330, 1071, 1163, 1229, 1524, 2262, 2294, 2426
ZraI	GACGTC	1 cut(s)	178
ZrmI	AGTACT	1 cut(s)	317

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.