Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0013996

Physical Location & Seq

Genomic Coordinates Reverse (-)

5255207 .. 5258475

Gene Structure 3269 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG063900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2463 bp

ATGGCGCTAAATTTGCCGACTTCGTGCCCCATTTTCGCGCCACCGGTGAACCCGAACCCGGCCCACAACCCGCTCCAGAACCGCCCGCCCACGGAGGTCCGATTCGCGCGGTGGAACAACGCCAACGCCGAGAAATTCAACCAGCGCCGCCGCGCCCAGCAAGAAATCGAGGACGACGTCCGCCGCGAGCGCCGCTTCGACTCCGCCACCAGAATCGCCACCGTCGACTCCTCCTCCTCCGACGCCGAACCAGCATTCAAATCCATAGGCACGCCTTCGTCTCCCTCAAGCCCTTCAATTCCCGGCAGAAAATCCAAGTACTCCAAGAACCCTAGCTCGCACCCGGCGTTTCGGCGAGTCATCAGACCCACGAAGCTCTCGAGTATCGCCAGAGAGAAGCCGGAAATCGACCGGAAAGCTAACATCTCCGTCGGCAACGACGGGCTTTCGTACGTCATCGACGGCGCGCCGTTTGAGTTCAAGTACAGCTACACCGAGACCCCGAAGCAGAAGCCCATTAAGCTCCGGGAGCCGCCCTACGCGCCGTTCGGCCCCACCACGATGGGCCGGCCGTGGACGGGTCGGGCCCCATTGCCTCCGAGCAAGAAGAAACTGAAGGAGTTCGATTCGTTCCAACTGCCGCCGCCGCATAAGAAAGGGGTTAAGCCGGTGCAGTCGCCGGGTCCGTATTTACCCGGGTCGGGTCCCAAGTATGTCAAGTCCAGGGAGGAGATATTGGGTGAGCCGTTGACCGATCAGGAAGTGAAAGACTTGGTTAATAGCTGTGTTAAGACCAGAAGGCAACTCAATATGGGTAGAGATGGATTGACACACAACATGCTGGATAATATTCATGCTCATTGGAAGCGGCGGAGAGTGTGCAAGATAAAATGTAAAGGGGTGTGTACAGTCGACATGGAAAATGTGTGCCAGCAATTAGAGGAAAGAACTGGAGGGAAAATCATTTATAGAAGAGGTGGGGTGATTTTTCTTTTCCGGGGGAGAAACTACAACTATAAAACTCGGCCGCGGTTTCCTCTCATGCTTTGGAGACCTATCACTCCTGTGTATCCTAGATTGATTCAGAGGGCTCCTGAGGGACTAACAGTTGAAGAAGCAACTGAAATGCGCAAGAAGGGGAGGAATCTGATACCAATACGCAAGCTAGGAAAAAATGGAGTATACTCTGACCTGGTAGACAATGTCAGAGAGGCCTTTGAAGAGTGTGAACTAGTGCGAATAGATTGTCAAGGGATGAATGGGAGTGACTACCGTAAAATAGGTGCTAAACTAAAGGATCTTGTCCCTTGTGTGCTAATTTCCTTTGAACGCGAGAACATTCTTGTGTGGAGAGGACGGGAATGGAAGTCTTCGTTCCTAAATCCGGAGAGTAATCTTAAGGAAGTCAAAGAATCTGATGTTGATGATTCACCTTCTATTGCACCTTCCTTGGAAGGTGAAGAAGCATCGACGTTATGTGCTTTTACAGCTTCAGTCAATGATGAAAATCCTCAAATGATCGACACTAGTATCACCTCTTCAAGTTCTGAAGTTGTGGGTGCTGAGGGAACTGAGGATCTATCCCCTTCACCATATATTAAGCCATGTGCCACAATTGATACAGTTTCCACTGTGGGAGGCACTTATGAAACTGTAACCATCTCGGACATCAAAGGCTTTAGAAATGATGAAGCAGAATTGGAGATGAAGGCCTATAGCAGTTCAACCATACCACAGGATACCAGGTATGTTCATGATGATGCAGAAACGATTTCCATCTCAGACATCAAGGGCTTTAGAAATGATGAAGCAGAATTGGAAATGAAGGCCTATAGCAGTTCAACCTTACCGCAGGATGCTGATGATGAGGCCGAAACAATTTCCAGTACATCTGGAACTGAAAACATATTGGATAGTACATGCCATACTGATGAAGCATCAGCAACTACATCAGTGGGGACCATGCCAGTGACTGTTGAAAGCACTGAAACGAAGTTGGTTGCCCCTGGTAGTAATGAGACTCCACAAGATGGTTCTATAGACTCGCAAAATCTCAATGAGCAAGCAAGGTTGAGTGCAGCCTGTAAAGAGAAGGTGCTATCACTCTTGAACGAAGCTGTTGGGAGTGGGAGTGCACTTATTTTAGACGATTCGTCGTTGGATGCTGACATCATATATCAGAGGGCAGTTGCTCTCGCCAAGTCTGCTCCACCTGGGCCAGTGTTTAAGCATCGACCTAGGAGAGTTGCAGCTCAAATGAGTAAGAAGCTAGTAGTAAGAAAACAGAAGCAAGAAGCCACTGAGTTGGAAGTGAAAGAGATAACAGTTTATGCGAAGAATGGAAGTGAGAAGAAGGATTCCAAAGTTCACAGAACAAAAACAAGAGATTTTGGTGAACCTCTAGATAGCATTGTACCACAGGGAAGCCTGAGAGTTGATGAACTTGCTAAGCTATTAGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000373 GO:0000375 GO:0000377 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRS1_YhbY

Protein Analysis

820

Amino Acids

91.0

Weight (kDa)

8.34

Isoelectric Point (pI)

51.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CRS1_YhbY	PF01985	250 - 333	1.1e-20	CRS1 / YhbY (CRM) domain
CRS1_YhbY	PF01985	368 - 451	1.4e-16	CRS1 / YhbY (CRM) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013996)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20020
fragaria_vesca	FvH4_1g05780
malus_domestica	MD02G1059500.v1.1 MD15G1193500.v1.1
prunus_persica	Prupe.7G223600_v2.0.a1
pyrus_communis	pycom02g04850 pycom15g17320
rosa_chinensis	RchiOBHm_Chr2g0091431
rosa_laevigata	RLG00000016223
rosa_multiflora	Rmu_ssc0000333.1_g000008
rosa_roxburghii	Rroxscaffold_2G00150090
rosa_rugosa	Rorug02G0017800
rosa_samantha	Rh2AG062700 Rh2BG062000 Rh2CG063900 Rh2DG062300
rosa_wichuraiana	Rw2G005740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	180
Acc16I	TGCGCA	1 cut(s)	1130
AccB7I	CCANNNNNTGG	1 cut(s)	2030
AccBSI	CCGCTC	1 cut(s)	73
AccI	GTMKAC	4 cut(s)	225, 912, 1182, 1197
AccII	CGCG	9 cut(s)	38, 107, 109, 153, 186, 467, 542, 1030, 1332
AccIII	TCCGGA	1 cut(s)	1384
AclWI	GGATC	2 cut(s)	1305, 1584
AcoI	YGGCCR	2 cut(s)	569, 1025
AcsI	RAATTY	2 cut(s)	10, 134
AcuI	CTGAAG	3 cut(s)	635, 1476, 1569
AcyI	GRCGYC	2 cut(s)	177, 243
AfaI	GTAC	7 cut(s)	320, 452, 485, 907, 1888, 1918, 2415
AfiI	CCNNNNNNNGG	6 cut(s)	58, 91, 578, 701, 1384, 2030
AflII	CTTAAG	1 cut(s)	1397
AgeI	ACCGGT	1 cut(s)	43
AhdI	GACNNNNNGTC	1 cut(s)	2152
AhlI	ACTAGT	2 cut(s)	1231, 1526
AjnI	CCWGG	5 cut(s)	722, 1191, 1742, 2005, 2212
AleI	CACNNNNGTG	1 cut(s)	1064
Alw21I	GWGCWC	1 cut(s)	2137
Alw26I	GTCTC	4 cut(s)	285, 491, 1045, 2012
Alw44I	GTGCAC	1 cut(s)	2133
AlwI	GGATC	2 cut(s)	1305, 1584
AlwNI	CAGNNNCTG	1 cut(s)	1973
Ama87I	CYCGRG	2 cut(s)	379, 695
Aor13HI	TCCGGA	1 cut(s)	1384
ApaI	GGGCCC	1 cut(s)	589
ApaLI	GTGCAC	1 cut(s)	2133
ApeKI	GCWGC	2 cut(s)	2078, 2249
ApoI	RAATTY	2 cut(s)	10, 134
ArsI	GACNNNNNNTTYG	2 cut(s)	1231, 1263
AscI	GGCGCGCC	1 cut(s)	465
AsiGI	ACCGGT	1 cut(s)	43
Asp700I	GAANNNNTTC	1 cut(s)	620
AspA2I	CCTAGG	1 cut(s)	2237
AsuC2I	CCSGG	8 cut(s)	59, 303, 344, 527, 681, 696, 697, 998
AsuHPI	GGTGA	8 cut(s)	58, 752, 994, 1422, 1469, 1525, 1581, 2405
AvaI	CYCGRG	2 cut(s)	379, 695
AvaII	GGWCC	4 cut(s)	97, 683, 704, 1959
AvrII	CCTAGG	1 cut(s)	2237
AxyI	CCTNAGG	1 cut(s)	1095
BaeGI	GKGCMC	3 cut(s)	29, 589, 2137
BaeI	ACNNNNGTAYC	2 cut(s)	1513, 1546
BanII	GRGCYC	2 cut(s)	589, 1093
BarI	GAAGNNNNNNTAC	2 cut(s)	1522, 1554
BbsI	GAAGAC	1 cut(s)	1362
Bbv12I	GWGCWC	1 cut(s)	2137
BbvCI	CCTCAGC	1 cut(s)	1563
BbvI	GCAGC	2 cut(s)	2090, 2261
BccI	CCATC	5 cut(s)	556, 815, 1667, 1784, 2024
BceAI	ACGGC	5 cut(s)	454, 478, 529, 556, 730
BciT130I	CCWGG	5 cut(s)	724, 1193, 1744, 2007, 2214
BciVI	GTATCC	2 cut(s)	1080, 1732
BcnI	CCSGG	8 cut(s)	59, 303, 344, 527, 681, 696, 697, 998
BcoDI	GTCTC	4 cut(s)	285, 491, 1045, 2012
BcuI	ACTAGT	2 cut(s)	1231, 1526
BfaI	CTAG	8 cut(s)	333, 1074, 1166, 1232, 1527, 2238, 2270, 2402
BfmI	CTRYAG	3 cut(s)	1714, 1831, 2037
BfoI	RGCGCY	3 cut(s)	8, 148, 193
BfrI	CTTAAG	1 cut(s)	1397
BfuI	GTATCC	2 cut(s)	1080, 1732
BlnI	CCTAGG	1 cut(s)	2237
BlpI	GCTNAGC	1 cut(s)	2448
BmcAI	AGTACT	1 cut(s)	320
Bme18I	GGWCC	4 cut(s)	97, 683, 704, 1959
BmeRI	GACNNNNNGTC	1 cut(s)	2152
BmeT110I	CYCGRG	2 cut(s)	379, 695
BmiI	GGNNCC	9 cut(s)	531, 553, 587, 588, 684, 705, 706, 1092, 1960
BmsI	GCATC	6 cut(s)	1475, 1750, 1846, 1946, 2152, 2239
BpiI	GAAGAC	1 cut(s)	1362
BpmI	CTGGAG	2 cut(s)	59, 972
Bpu10I	CCTNAGC	1 cut(s)	1563
Bpu1102I	GCTNAGC	1 cut(s)	2448
BpuEI	CTTGAG	1 cut(s)	271
BpuMI	CCSGG	8 cut(s)	59, 303, 344, 527, 681, 696, 697, 998
BsaBI	GATNNNNATC	2 cut(s)	1506, 1775
BsaHI	GRCGYC	2 cut(s)	177, 243
BsaI	GGTCTC	2 cut(s)	491, 1045
BsaWI	WCCGGW	3 cut(s)	43, 411, 1384
BsaXI	ACNNNNNCTCC	4 cut(s)	218, 248, 2116, 2146
Bsc4I	CCNNNNNNNGG	6 cut(s)	58, 91, 578, 701, 1384, 2030
Bse118I	RCCGGY	3 cut(s)	43, 567, 667
Bse1I	ACTGG	4 cut(s)	955, 1884, 1967, 2219
Bse21I	CCTNAGG	1 cut(s)	1095
Bse3DI	GCAATG	1 cut(s)	590
Bse8I	GATNNNNATC	2 cut(s)	1506, 1775
BseAI	TCCGGA	1 cut(s)	1384
BseBI	CCWGG	5 cut(s)	724, 1193, 1744, 2007, 2214
BseGI	GGATG	3 cut(s)	1260, 1861, 2167
BseJI	GATNNNNATC	2 cut(s)	1506, 1775
BseLI	CCNNNNNNNGG	6 cut(s)	58, 91, 578, 701, 1384, 2030
BseMI	GCAATG	1 cut(s)	590
BseMII	CTCAG	6 cut(s)	1086, 1554, 1563, 1794, 2292, 2420
BseNI	ACTGG	4 cut(s)	955, 1884, 1967, 2219
BsePI	GCGCGC	1 cut(s)	465
BseRI	GAGGAG	4 cut(s)	220, 223, 226, 743
BseSI	GKGCMC	3 cut(s)	29, 589, 2137
BseX3I	CGGCCG	2 cut(s)	569, 1025
BseXI	GCAGC	2 cut(s)	2090, 2261
BseYI	CCCAGC	1 cut(s)	156
BsgI	GTGCAG	2 cut(s)	692, 2097
Bsh1236I	CGCG	9 cut(s)	38, 107, 109, 153, 186, 467, 542, 1030, 1332
Bsh1285I	CGRYCG	3 cut(s)	412, 572, 1028
BshTI	ACCGGT	1 cut(s)	43
BsiEI	CGRYCG	3 cut(s)	412, 572, 1028
BsiHKAI	GWGCWC	1 cut(s)	2137
BsiHKCI	CYCGRG	2 cut(s)	379, 695
BsiWI	CGTACG	1 cut(s)	450
BslFI	GGGAC	4 cut(s)	690, 1113, 1289, 1972
BslI	CCNNNNNNNGG	6 cut(s)	58, 91, 578, 701, 1384, 2030
BsmAI	GTCTC	4 cut(s)	285, 491, 1045, 2012
BsmBI	CGTCTC	1 cut(s)	285
BsmFI	GGGAC	4 cut(s)	690, 1113, 1289, 1972
BsmI	GAATGC	1 cut(s)	254
Bso31I	GGTCTC	2 cut(s)	491, 1045
BsoBI	CYCGRG	2 cut(s)	379, 695
Bsp120I	GGGCCC	1 cut(s)	585
Bsp1286I	GDGCHC	4 cut(s)	29, 589, 1093, 2137
Bsp13I	TCCGGA	1 cut(s)	1384
Bsp1407I	TGTACA	1 cut(s)	905
Bsp143I	GATC	4 cut(s)	754, 1297, 1518, 1576
Bsp1720I	GCTNAGC	1 cut(s)	2448
BspCNI	CTCAG	6 cut(s)	1087, 1555, 1564, 1793, 2293, 2421
BspEI	TCCGGA	1 cut(s)	1384
BspFNI	CGCG	9 cut(s)	38, 107, 109, 153, 186, 467, 542, 1030, 1332
BspHI	TCATGA	1 cut(s)	1753
BspLI	GGNNCC	9 cut(s)	531, 553, 587, 588, 684, 705, 706, 1092, 1960
BspPI	GGATC	2 cut(s)	1305, 1584
BspTI	CTTAAG	1 cut(s)	1397
BspTNI	GGTCTC	2 cut(s)	491, 1045
BsrBI	CCGCTC	1 cut(s)	73
BsrDI	GCAATG	1 cut(s)	590
BsrFI	RCCGGY	3 cut(s)	43, 567, 667
BsrGI	TGTACA	1 cut(s)	905
BsrI	ACTGG	4 cut(s)	955, 1884, 1967, 2219
BssAI	RCCGGY	3 cut(s)	43, 567, 667
BssHII	GCGCGC	1 cut(s)	465
BssMI	GATC	4 cut(s)	754, 1297, 1518, 1576
BssNAI	GTATAC	1 cut(s)	1183
BssNI	GRCGYC	2 cut(s)	177, 243
BssT1I	CCWWGG	2 cut(s)	1449, 2237
Bst1107I	GTATAC	1 cut(s)	1183
Bst2UI	CCWGG	5 cut(s)	724, 1193, 1744, 2007, 2214
Bst4CI	ACNGT	9 cut(s)	223, 910, 1108, 1274, 1624, 1633, 1654, 1975, 2326
Bst6I	CTCTTC	3 cut(s)	967, 1215, 1543
BstACI	GRCGYC	2 cut(s)	177, 243
BstAFI	CTTAAG	1 cut(s)	1397
BstAUI	TGTACA	1 cut(s)	905
BstC8I	GCNNGC	9 cut(s)	86, 188, 272, 338, 467, 569, 932, 1163, 2064
BstDEI	CTNAG	7 cut(s)	1095, 1563, 1572, 1780, 2301, 2429, 2448
BstDSI	CCRYGG	3 cut(s)	90, 572, 1028
BstF5I	GGATG	3 cut(s)	1260, 1861, 2167
BstFNI	CGCG	9 cut(s)	38, 107, 109, 153, 186, 467, 542, 1030, 1332
BstH2I	RGCGCY	3 cut(s)	8, 148, 193
BstKTI	GATC	4 cut(s)	757, 1300, 1521, 1579
BstMAI	GTCTC	4 cut(s)	285, 491, 1045, 2012
BstMBI	GATC	4 cut(s)	754, 1297, 1518, 1576
BstMCI	CGRYCG	3 cut(s)	412, 572, 1028
BstNI	CCWGG	5 cut(s)	724, 1193, 1744, 2007, 2214
BstNSI	RCATGY	2 cut(s)	841, 1923
BstSFI	CTRYAG	3 cut(s)	1714, 1831, 2037
BstSLI	GKGCMC	3 cut(s)	29, 589, 2137
BstUI	CGCG	9 cut(s)	38, 107, 109, 153, 186, 467, 542, 1030, 1332
BstV1I	GCAGC	2 cut(s)	2090, 2261
BstV2I	GAAGAC	1 cut(s)	1362
BstX2I	RGATCY	2 cut(s)	1297, 1576
BstXI	CCANNNNNNTGG	2 cut(s)	562, 2305
BstYI	RGATCY	2 cut(s)	1297, 1576
BstZ17I	GTATAC	1 cut(s)	1183
BstZI	CGGCCG	2 cut(s)	569, 1025
Bsu36I	CCTNAGG	1 cut(s)	1095
BsuI	GTATCC	2 cut(s)	1080, 1732
BtgI	CCRYGG	3 cut(s)	90, 572, 1028
BtsCI	GGATG	3 cut(s)	1260, 1861, 2167
BtsIMutI	CAGTG	6 cut(s)	1629, 1959, 1974, 1983, 2226, 2298
Cac8I	GCNNGC	9 cut(s)	86, 188, 272, 338, 467, 569, 932, 1163, 2064
CaiI	CAGNNNCTG	1 cut(s)	1973
CciI	TCATGA	1 cut(s)	1753
Cfr10I	RCCGGY	3 cut(s)	43, 567, 667
Cfr42I	CCGCGG	1 cut(s)	1031
Cfr9I	CCCGGG	1 cut(s)	695
CseI	GACGC	1 cut(s)	251
CsiI	ACCWGGT	2 cut(s)	1191, 1742
Csp6I	GTAC	7 cut(s)	319, 451, 484, 906, 1887, 1917, 2414
CspAI	ACCGGT	1 cut(s)	43
CviAII	CATG	9 cut(s)	838, 854, 916, 1042, 1605, 1754, 1920, 1963, 2460
CviQI	GTAC	7 cut(s)	319, 451, 484, 906, 1887, 1917, 2414
DdeI	CTNAG	7 cut(s)	1095, 1563, 1572, 1780, 2301, 2429, 2448
DpnI	GATC	4 cut(s)	756, 1299, 1520, 1578
DpnII	GATC	4 cut(s)	754, 1297, 1518, 1576
DriI	GACNNNNNGTC	1 cut(s)	2152
EaeI	YGGCCR	2 cut(s)	569, 1025
EagI	CGGCCG	2 cut(s)	569, 1025
Eam1104I	CTCTTC	3 cut(s)	967, 1215, 1543
Eam1105I	GACNNNNNGTC	1 cut(s)	2152
EarI	CTCTTC	3 cut(s)	967, 1215, 1543
EciI	GGCGGA	3 cut(s)	170, 193, 886
EclXI	CGGCCG	2 cut(s)	569, 1025
Eco130I	CCWWGG	2 cut(s)	1449, 2237
Eco147I	AGGCCT	3 cut(s)	1214, 1712, 1829
Eco24I	GRGCYC	2 cut(s)	589, 1093
Eco31I	GGTCTC	2 cut(s)	491, 1045
Eco47I	GGWCC	4 cut(s)	97, 683, 704, 1959
Eco52I	CGGCCG	2 cut(s)	569, 1025
Eco57I	CTGAAG	3 cut(s)	635, 1476, 1569
Eco81I	CCTNAGG	1 cut(s)	1095
Eco88I	CYCGRG	2 cut(s)	379, 695
EcoO109I	RGGNCCY	2 cut(s)	586, 704
EcoRII	CCWGG	5 cut(s)	722, 1191, 1742, 2005, 2212
EcoT14I	CCWWGG	2 cut(s)	1449, 2237
EcoT38I	GRGCYC	2 cut(s)	589, 1093
ErhI	CCWWGG	2 cut(s)	1449, 2237
Esp3I	CGTCTC	1 cut(s)	285
FaeI	CATG	9 cut(s)	841, 857, 919, 1045, 1608, 1757, 1923, 1966, 2463
FaqI	GGGAC	4 cut(s)	690, 1113, 1289, 1972
FatI	CATG	9 cut(s)	837, 853, 915, 1041, 1604, 1753, 1919, 1962, 2459
FauI	CCCGC	2 cut(s)	78, 93
FblI	GTMKAC	4 cut(s)	225, 912, 1182, 1197
FokI	GGATG	3 cut(s)	1267, 1868, 2174
FriOI	GRGCYC	2 cut(s)	589, 1093
FseI	GGCCGGCC	1 cut(s)	571
FspBI	CTAG	8 cut(s)	333, 1074, 1166, 1232, 1527, 2238, 2270, 2402
FspI	TGCGCA	1 cut(s)	1130
GsaI	CCCAGC	1 cut(s)	160
GsuI	CTGGAG	2 cut(s)	59, 972
HaeII	RGCGCY	3 cut(s)	8, 148, 193
HgaI	GACGC	1 cut(s)	251
Hin1I	GRCGYC	2 cut(s)	177, 243
Hin1II	CATG	9 cut(s)	841, 857, 919, 1045, 1608, 1757, 1923, 1966, 2463
HincII	GTYRAC	3 cut(s)	226, 750, 913
HindII	GTYRAC	3 cut(s)	226, 750, 913
HphI	GGTGA	8 cut(s)	58, 752, 994, 1422, 1469, 1525, 1581, 2405
Hpy188III	TCNNGA	9 cut(s)	76, 379, 758, 1094, 1385, 1754, 1893, 2107, 2402
Hpy99I	CGWCG	8 cut(s)	179, 227, 245, 434, 443, 464, 1474, 2158
HpyCH4III	ACNGT	9 cut(s)	223, 910, 1108, 1274, 1624, 1633, 1654, 1975, 2326
HpyCH4IV	ACGT	3 cut(s)	177, 453, 1472
HpyCH4V	TGCA	7 cut(s)	673, 882, 1442, 1763, 2078, 2135, 2249
HpyF3I	CTNAG	7 cut(s)	1095, 1563, 1572, 1780, 2301, 2429, 2448
HpySE526I	ACGT	3 cut(s)	177, 453, 1472
Hsp92I	GRCGYC	2 cut(s)	177, 243
Hsp92II	CATG	9 cut(s)	841, 857, 919, 1045, 1608, 1757, 1923, 1966, 2463
KflI	GGGWCCC	1 cut(s)	704
Kpn2I	TCCGGA	1 cut(s)	1384
KroI	GCCGGC	1 cut(s)	567
KroNI	GCCGGC	1 cut(s)	569
KspI	CCGCGG	1 cut(s)	1031
Kzo9I	GATC	4 cut(s)	754, 1297, 1518, 1576
LmnI	GCTCC	5 cut(s)	78, 528, 529, 1096, 2212
Lsp1109I	GCAGC	2 cut(s)	2090, 2261
LweI	GCATC	6 cut(s)	1475, 1750, 1846, 1946, 2152, 2239
MabI	ACCWGGT	2 cut(s)	1191, 1742
MaeI	CTAG	8 cut(s)	333, 1074, 1166, 1232, 1527, 2238, 2270, 2402
MaeII	ACGT	3 cut(s)	177, 453, 1472
MaeIII	GTNAC	3 cut(s)	1265, 1654, 1969
MalI	GATC	4 cut(s)	756, 1299, 1520, 1578
MbiI	CCGCTC	1 cut(s)	73
MboI	GATC	4 cut(s)	754, 1297, 1518, 1576
MboII	GAAGA	9 cut(s)	619, 984, 1124, 1232, 1362, 1472, 1530, 2347, 2362
MfeI	CAATTG	1 cut(s)	1614
MflI	RGATCY	2 cut(s)	1297, 1576
MhlI	GDGCHC	4 cut(s)	29, 589, 1093, 2137
MluCI	AATT	9 cut(s)	10, 134, 297, 935, 1317, 1614, 1697, 1814, 1878
MlyI	GAGTC	5 cut(s)	194, 221, 366, 2014, 2036
MmeI	TCCRAC	4 cut(s)	264, 658, 2139, 2286
MroI	TCCGGA	1 cut(s)	1384
MroNI	GCCGGC	1 cut(s)	567
MroXI	GAANNNNTTC	1 cut(s)	620
MseI	TTAA	7 cut(s)	519, 663, 777, 789, 1398, 1599, 2226
MslI	CAYNNNNRTG	6 cut(s)	560, 1064, 1343, 1758, 1929, 1967
MspA1I	CMGCKG	1 cut(s)	1030
MspCI	CTTAAG	1 cut(s)	1397
MunI	CAATTG	1 cut(s)	1614
Mva1269I	GAATGC	1 cut(s)	254
MvaI	CCWGG	5 cut(s)	724, 1193, 1744, 2007, 2214
MvnI	CGCG	9 cut(s)	38, 107, 109, 153, 186, 467, 542, 1030, 1332
NaeI	GCCGGC	1 cut(s)	569
NciI	CCSGG	8 cut(s)	59, 303, 344, 527, 681, 696, 697, 998
NdeII	GATC	4 cut(s)	754, 1297, 1518, 1576
NgoMIV	GCCGGC	1 cut(s)	567
NlaIII	CATG	9 cut(s)	841, 857, 919, 1045, 1608, 1757, 1923, 1966, 2463
NlaIV	GGNNCC	9 cut(s)	531, 553, 587, 588, 684, 705, 706, 1092, 1960
NmeAIII	GCCGAG	2 cut(s)	154, 1003
NmuCI	GTSAC	2 cut(s)	1265, 1969
NsbI	TGCGCA	1 cut(s)	1130
NspI	RCATGY	2 cut(s)	841, 1923
OliI	CACNNNNGTG	1 cut(s)	1064
PaeR7I	CTCGAG	1 cut(s)	379
PagI	TCATGA	1 cut(s)	1753
PalAI	GGCGCGCC	1 cut(s)	465
PauI	GCGCGC	1 cut(s)	465
PceI	AGGCCT	3 cut(s)	1214, 1712, 1829
PcsI	WCGNNNNNNNCGW	7 cut(s)	126, 174, 183, 222, 344, 377, 683
PctI	GAATGC	1 cut(s)	254
PdiI	GCCGGC	1 cut(s)	569
PdmI	GAANNNNTTC	1 cut(s)	620
PfeI	GAWTC	9 cut(s)	102, 213, 626, 1081, 1144, 1412, 1427, 2150, 2357
Pfl23II	CGTACG	1 cut(s)	450
PflFI	GACNNNGTC	2 cut(s)	176, 1202
PflMI	CCANNNNNTGG	1 cut(s)	2030
PfoI	TCCNGGA	1 cut(s)	525
PinAI	ACCGGT	1 cut(s)	43
PleI	GAGTC	5 cut(s)	194, 221, 365, 2014, 2036
PpsI	GAGTC	5 cut(s)	194, 221, 365, 2014, 2036
PpuMI	RGGWCCY	1 cut(s)	704
Psp5II	RGGWCCY	1 cut(s)	704
Psp6I	CCWGG	5 cut(s)	722, 1191, 1742, 2005, 2212
PspFI	CCCAGC	1 cut(s)	156
PspGI	CCWGG	5 cut(s)	722, 1191, 1742, 2005, 2212
PspLI	CGTACG	1 cut(s)	450
PspN4I	GGNNCC	9 cut(s)	531, 553, 587, 588, 684, 705, 706, 1092, 1960
PspOMI	GGGCCC	1 cut(s)	585
PspPPI	RGGWCCY	1 cut(s)	704
PstNI	CAGNNNCTG	1 cut(s)	1973
PsuI	RGATCY	2 cut(s)	1297, 1576
PsyI	GACNNNGTC	2 cut(s)	176, 1202
PteI	GCGCGC	1 cut(s)	465
RigI	GGCCGGCC	1 cut(s)	571
RsaI	GTAC	7 cut(s)	320, 452, 485, 907, 1888, 1918, 2415
RsaNI	GTAC	7 cut(s)	319, 451, 484, 906, 1887, 1917, 2414
RseI	CAYNNNNRTG	6 cut(s)	560, 1064, 1343, 1758, 1929, 1967
SacII	CCGCGG	1 cut(s)	1031
SalI	GTCGAC	2 cut(s)	224, 911
SaqAI	TTAA	7 cut(s)	519, 663, 777, 789, 1398, 1599, 2226
Sau3AI	GATC	4 cut(s)	754, 1297, 1518, 1576
ScaI	AGTACT	1 cut(s)	320
SchI	GAGTC	5 cut(s)	194, 221, 366, 2014, 2036
SduI	GDGCHC	4 cut(s)	29, 589, 1093, 2137
SexAI	ACCWGGT	2 cut(s)	1191, 1742
SfaNI	GCATC	6 cut(s)	1475, 1750, 1846, 1946, 2152, 2239
SfcI	CTRYAG	3 cut(s)	1714, 1831, 2037
Sfr274I	CTCGAG	1 cut(s)	379
Sfr303I	CCGCGG	1 cut(s)	1031
SgrAI	CRCCGGYG	1 cut(s)	43
SgrBI	CCGCGG	1 cut(s)	1031
SgsI	GGCGCGCC	1 cut(s)	465
SinI	GGWCC	4 cut(s)	97, 683, 704, 1959
SlaI	CTCGAG	1 cut(s)	379
SmaI	CCCGGG	1 cut(s)	697
SmiMI	CAYNNNNRTG	6 cut(s)	560, 1064, 1343, 1758, 1929, 1967
SmlI	CTYRAG	3 cut(s)	286, 379, 1397
SmoI	CTYRAG	3 cut(s)	286, 379, 1397
SpeI	ACTAGT	2 cut(s)	1231, 1526
Sse9I	AATT	9 cut(s)	10, 134, 297, 935, 1317, 1614, 1697, 1814, 1878
SseBI	AGGCCT	3 cut(s)	1214, 1712, 1829
SspI	AATATT	1 cut(s)	850
SspMI	CTAG	8 cut(s)	333, 1074, 1166, 1232, 1527, 2238, 2270, 2402
StuI	AGGCCT	3 cut(s)	1214, 1712, 1829
StyI	CCWWGG	2 cut(s)	1449, 2237
TaaI	ACNGT	9 cut(s)	223, 910, 1108, 1274, 1624, 1633, 1654, 1975, 2326
TaiI	ACGT	3 cut(s)	180, 456, 1475
TaqII	GACCGA	1 cut(s)	767
TasI	AATT	9 cut(s)	10, 134, 297, 935, 1317, 1614, 1697, 1814, 1878
TatI	WGTACW	5 cut(s)	318, 483, 905, 1886, 1916
TfiI	GAWTC	9 cut(s)	102, 213, 626, 1081, 1144, 1412, 1427, 2150, 2357
Tru1I	TTAA	7 cut(s)	519, 663, 777, 789, 1398, 1599, 2226
Tru9I	TTAA	7 cut(s)	519, 663, 777, 789, 1398, 1599, 2226
TscAI	CASTG	6 cut(s)	1636, 1959, 1974, 1990, 2226, 2305
TseFI	GTSAC	2 cut(s)	1265, 1969
TseI	GCWGC	2 cut(s)	2078, 2249
Tsp45I	GTSAC	2 cut(s)	1265, 1969
TspGWI	ACGGA	3 cut(s)	107, 418, 675
TspMI	CCCGGG	1 cut(s)	695
TspRI	CASTG	6 cut(s)	1636, 1959, 1974, 1990, 2226, 2305
Tth111I	GACNNNGTC	2 cut(s)	176, 1202
Van91I	CCANNNNNTGG	1 cut(s)	2030
Vha464I	CTTAAG	1 cut(s)	1397
VneI	GTGCAC	1 cut(s)	2133
VpaK11BI	GGWCC	4 cut(s)	97, 683, 704, 1959
XapI	RAATTY	2 cut(s)	10, 134
XbaI	TCTAGA	1 cut(s)	2401
XceI	RCATGY	2 cut(s)	841, 1923
XhoI	CTCGAG	1 cut(s)	379
XmaI	CCCGGG	1 cut(s)	695
XmaJI	CCTAGG	1 cut(s)	2237
XmiI	GTMKAC	4 cut(s)	225, 912, 1182, 1197
XmnI	GAANNNNTTC	1 cut(s)	620
XspI	CTAG	8 cut(s)	333, 1074, 1166, 1232, 1527, 2238, 2270, 2402
ZraI	GACGTC	1 cut(s)	178
ZrmI	AGTACT	1 cut(s)	320

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.