Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0008862

Physical Location & Seq

Genomic Coordinates Reverse (-)

6108150 .. 6111894

Gene Structure 3745 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2790 bp

ATGTTGAGGGAATTGAAGTTACCAGGTCGATCAATGAGGAAGGAGAACTTGAGTTTGGTCTCCCATACGGTGGAGGCCACGGTGTTCGTCGACACCAGCCTCGGCACCCACATCGCCGTCACCATCGACCCCAACGACACCGTTTCTGCACTCAAAAGGAAAATAGAACATGAACATCTATTGTGCTTTACTAGGGCGGGAAAAATCGAAGTTGAAGCTCTAAAGGTAAAACGCAAAGGATTCTTTTATCACCTATCAGATTCCATGGTTGTTAGAAATGCTTTCAGGGTCAACAATAACTGGTTTGTTTCTGCCGATGCTAAAGATGTTCGGGGGAAAAGATTGTCCAATTTTAATGATTCAATGCCATTGTTACTTGAGGGGAACAAGCGTGCAGAAGAGAAAGTTAATATTGCTGACCAGGCTGGTTCAGTTGATTCTGCTAGAGAAACTTCAAAACAATTGGAGATAGGGTTCAAGAGTTCTGGTATTGATCATTGTGCAACTTCATCTGATGAGACGGGGAATCGGCTGGAACCTGAAATACAGGAGGACCACAGCCTACGTAGCAAGGGGTACAGAGTTCCCAAAACACAAGATTGCAGGGAAGATGGCTCGAGGAAAGAAATTGATGTCCAATGCGACGTCTCTTCGGAAAAAGCTCTGCCGGCTGAAAAGAAAAGACAACGCAAGACTAAGCAGAGAAATGAAAAACCAGTTCAGTTAAAAGAAGACGGTGCTTCAGTTCTTGGATTTGGTAAAGAACAGTCACAGCCAGATATTATACCACCTGAAAATTCATTAGGCAATCAGAGTAGAGATGTTCTATGTGACGTGACTATTGGAAAGAAAACTACTACCGGTAAAGATGTTTCACAGGATACAGCAGCTGGAAACAAAAACACTACAGAAGAACCTTGCAGGAGTTCGGCTTCTAGTATGGATAACAGGTCACATTCTGGAATTCATATGACAAATGATGCGTACAAGGGCACTGAAGTTCTTGGAAAACACATCGGGAGCAGGGAGACTACATCTAAGCATGGCAGTCTTGTGGTCTCCAATATAGCAGTGGAAGATGCTTCACAATCTCAGCCTGCTGCAAAGAAAAAGCGGAAGTTTGAAAACATATCTGGTCTTGAGGATTCACTGAAAGAAAATGATAACGTGACTTCCAAGTCAGCGATTGCATCTGAATTCTCTTTAAGGGACACACAGAAAAGTGCAAGTGCTATCTTATATGGTTCAACTGCCGAATCTACGGAGAAGAAGAAGAAAAAGAGAAAGATTTCACCAAATTCTCTTCATGAAGTAGTTGCTGCAGCTCCTTCCGGAAGAGATGTTTTACAAGAGAGATCTGCTGTTGCTGCTTCAGGAAGTAATGATAAAAATTCAGGTGTAGAAGACAATGCTGCTTCTATTAATGAACAAGGTATACAAGCTTTAACACCACCTAAACTCAATGGAATCTCTCAGAAGGGATCTTTTATAGATGTTAATAATACTGCCGATGCTGGCAATGTGGAAAACAAAAGTGGTGAGGCTGAAGAAGGATTGGACAACCGTCCTCCCTCTGTTTTCAAAGTTCCCAGTGAAGGTGTAATTGATTGCGTAGAAAGAGTCGGAGAGGAGATGGAATCATTACAGAGAAAGGATTCTGAATTGGTGACGTCTGAAAAGACACAGTTGCCTGGTCAGGATAAGAGGGATAGGAATGATACAGAAGTCATTGTGAAATCTGAATTGTTGGATGCAAATGGAATGGTCACCCCTAATAACACTAGTAAGAAGAAAAAGAAGACCAGAAAAACCAAGGGATCCATAGGAGAAACTTTGGTTGAATCAGGTGCAGGACACATTAAAGGTTCTGAGAATGGAATTTCGTTGGATGAACCTCATGAAGCTGTACATGGTGAACATGCTAGTGATAAAGCTAAGGAGGAGGAAAGTAATGTTTCTAAGAAAAATGGGATAGACGTATCAGAAAAAGAAACGGAGAGTTCTCATATCGTTGCAAAAACTGATAACCTTGATCGCAGTGAGGTGGGGAACCTGGAGCAAAATGGCAAACCTCAAGAAAATGCAGAAAGTATGAAGCAGAACGTCATAAAGAAATCTAAGAGGAAAAAGAGTACCATGACAAAAGAAATCCCAAATTTGAAAGCTGAAGTGCAAAAAGTCGGTCACCAGGTTCCAACACCGACAACTCATATGTTGGACAAAACAAGTCCCATTGAACAATCAAATGGGAAAGCTGTGGAATCTGATAAGGGTTATGGCATGGAAACTGATTCGGTCCCTGTTCGGTCAAAATCCAAGCGTATTGAGCCTACTAAAGCTCCTTCTCATGCACTAGAACACACTAGCATAAGTTTTGGGAACCCTTCTGAAAATGGATGCTCTAACGAGGCTGATAAGAACATGGAAGTTTCTTGTGAAGGCAATAAGGACAACTTTGACAACCATCAGGAACCTGGACTAGGCCAGCATGAAGTTGCTACCTCTAAAGAAGTGCACGCTGAGGTGACTAGAACAAACAGAGCAGATGATAAACCAAAAAAGAAGCGAAGAAAGCTTGATGTACAAAGTGGTCCCTCGCCTGATCTGCAAAGTTCGCTCAAGTCTAAGGAGAACCAAGGGATCCGCATGATGGAAAGTCTGAAGCTGGCAACTCTAGCTCCATACAGCCGCAAGGATCATCATCCAAGGGTGACGATGGAAAAATGTTTTCGAAGAAAGTTCCTAAAACTGGGACCAAAGCCCCAACACCGGATAAGTCTGATAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

930

Amino Acids

101.95

Weight (kDa)

8.61

Isoelectric Point (pI)

42.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008862)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g25060 FvH4_4g25060 FvH4_4g25060 FvH4_4g25060
malus_domestica	MD13G1106900.v1.1 MD16G1107000.v1.1
prunus_persica	Prupe.1G239400_v2.0.a1 Prupe.1G239400_v2.0.a1
pyrus_communis	pycom13g09270 pycom16g09110
rosa_chinensis	RchiOBHm_Chr4g0432241
rosa_laevigata	RLG00000006860
rosa_multiflora	Rmu_co7961612.1_g000001 Rmu_sc0001084.1_g000049 Rmu_sc0039253.1_g000001
rosa_roxburghii	Rroxscaffold_5G00373690
rosa_rugosa	Rorug04G0255400 Rorug04G0255500
rosa_samantha	Rh4AG312600 Rh4BG320100 Rh4CG335300 Rh4DG315500
rosa_wichuraiana	Rw4G027170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1177
AatII	GACGTC	2 cut(s)	648, 1673
AccB1I	GGYRCC	1 cut(s)	104
AccB7I	CCANNNNNTGG	1 cut(s)	70
AccI	GTMKAC	2 cut(s)	90, 1435
AccIII	TCCGGA	1 cut(s)	1331
AciI	CCGC	4 cut(s)	197, 1114, 2644, 2689
AclWI	GGATC	6 cut(s)	1489, 1812, 1825, 2635, 2648, 2703
AcsI	RAATTY	7 cut(s)	796, 963, 1196, 1297, 1390, 1878, 2155
AcuI	CTGAAG	6 cut(s)	726, 1017, 1356, 1566, 2187, 2681
AcyI	GRCGYC	2 cut(s)	645, 1670
AfaI	GTAC	5 cut(s)	578, 986, 1908, 2134, 2583
AfiI	CCNNNNNNNGG	6 cut(s)	70, 1595, 2480, 2650, 2749, 2769
AgeI	ACCGGT	1 cut(s)	860
AhlI	ACTAGT	1 cut(s)	1781
AjiI	CACGTC	1 cut(s)	835
AjnI	CCWGG	6 cut(s)	22, 420, 1690, 2052, 2187, 2473
AjuI	GAANNNNNNNTTGG	2 cut(s)	38, 70
AloI	GAACNNNNNNTCC	2 cut(s)	458, 490
Alw21I	GWGCWC	1 cut(s)	2517
Alw26I	GTCTC	5 cut(s)	64, 512, 652, 1022, 1063
Alw44I	GTGCAC	1 cut(s)	2513
AlwI	GGATC	6 cut(s)	1489, 1812, 1825, 2635, 2648, 2703
AlwNI	CAGNNNCTG	1 cut(s)	890
Ama87I	CYCGRG	1 cut(s)	616
Aor13HI	TCCGGA	1 cut(s)	1331
AoxI	GGCC	2 cut(s)	75, 2482
ApaLI	GTGCAC	1 cut(s)	2513
ApeKI	GCWGC	6 cut(s)	887, 1100, 1319, 1322, 1367, 1412
ApoI	RAATTY	7 cut(s)	796, 963, 1196, 1297, 1390, 1878, 2155
ArsI	GACNNNNNNTTYG	2 cut(s)	2167, 2199
AseI	ATTAAT	1 cut(s)	1422
AsiGI	ACCGGT	1 cut(s)	860
Asp700I	GAANNNNTTC	2 cut(s)	1288, 1654
AspS9I	GGNCC	4 cut(s)	553, 2296, 2591, 2753
AsuII	TTCGAA	1 cut(s)	2731
AvaI	CYCGRG	1 cut(s)	616
AvaII	GGWCC	4 cut(s)	553, 2296, 2591, 2753
BaeGI	GKGCMC	2 cut(s)	995, 2517
BaeI	ACNNNNGTAYC	2 cut(s)	1710, 1743
BamHI	GGATCC	2 cut(s)	1817, 2640
BanI	GGYRCC	1 cut(s)	104
BbsI	GAAGAC	3 cut(s)	738, 1410, 1805
Bbv12I	GWGCWC	1 cut(s)	2517
BbvCI	CCTCAGC	1 cut(s)	2520
BbvI	GCAGC	6 cut(s)	899, 1087, 1306, 1334, 1354, 1399
BccI	CCATC	6 cut(s)	131, 605, 1627, 2472, 2644, 2710
BceAI	ACGGC	1 cut(s)	101
BcgI	CGANNNNNNTGC	2 cut(s)	94, 128
BciT130I	CCWGG	6 cut(s)	24, 422, 1692, 2054, 2189, 2475
BciVI	GTATCC	1 cut(s)	874
BclI	TGATCA	1 cut(s)	493
BcoDI	GTCTC	5 cut(s)	64, 512, 652, 1022, 1063
BcuI	ACTAGT	1 cut(s)	1781
BfmI	CTRYAG	2 cut(s)	906, 1320
BfuI	GTATCC	1 cut(s)	874
BglII	AGATCT	1 cut(s)	1355
BisI	GCNGC	7 cut(s)	888, 1101, 1320, 1323, 1368, 1413, 2689
BlsI	GCNGC	7 cut(s)	889, 1102, 1321, 1324, 1369, 1414, 2690
Bme1390I	CCNGG	6 cut(s)	24, 422, 1692, 2054, 2189, 2475
Bme18I	GGWCC	4 cut(s)	553, 2296, 2591, 2753
BmeT110I	CYCGRG	1 cut(s)	616
BmgBI	CACGTC	1 cut(s)	835
BmgT120I	GGNCC	4 cut(s)	553, 2296, 2591, 2753
BmrFI	CCNGG	6 cut(s)	24, 422, 1692, 2054, 2189, 2475
BmrI	ACTGGG	2 cut(s)	1584, 2759
BmsI	GCATC	7 cut(s)	307, 970, 1069, 1199, 1501, 1741, 2387
BmuI	ACTGGG	2 cut(s)	1584, 2759
BoxI	GACNNNNGTC	1 cut(s)	1563
BpiI	GAAGAC	3 cut(s)	738, 1410, 1805
BpmI	CTGGAG	1 cut(s)	2075
Bpu10I	CCTNAGC	2 cut(s)	1935, 2520
Bpu14I	TTCGAA	1 cut(s)	2731
BpuEI	CTTGAG	5 cut(s)	70, 398, 1160, 2058, 2603
BsaAI	YACGTR	1 cut(s)	566
BsaBI	GATNNNNATC	1 cut(s)	2700
BsaHI	GRCGYC	2 cut(s)	645, 1670
BsaI	GGTCTC	2 cut(s)	64, 1063
BsaJI	CCNNGG	6 cut(s)	78, 100, 264, 1812, 2635, 2705
BsaWI	WCCGGW	3 cut(s)	860, 1331, 2769
BsaXI	ACNNNNNCTCC	6 cut(s)	458, 488, 2323, 2353, 2662, 2692
Bsc4I	CCNNNNNNNGG	6 cut(s)	70, 1595, 2480, 2650, 2749, 2769
Bse118I	RCCGGY	2 cut(s)	667, 860
Bse1I	ACTGG	4 cut(s)	305, 716, 1590, 2754
Bse3DI	GCAATG	1 cut(s)	1525
Bse8I	GATNNNNATC	1 cut(s)	2700
BseAI	TCCGGA	1 cut(s)	1331
BseBI	CCWGG	6 cut(s)	24, 422, 1692, 2054, 2189, 2475
BseDI	CCNNGG	6 cut(s)	78, 100, 264, 1812, 2635, 2705
BseGI	GGATG	4 cut(s)	1756, 1894, 2402, 2701
BseJI	GATNNNNATC	1 cut(s)	2700
BseLI	CCNNNNNNNGG	6 cut(s)	70, 1595, 2480, 2650, 2749, 2769
BseMI	GCAATG	1 cut(s)	1525
BseMII	CTCAG	4 cut(s)	1106, 1487, 1860, 2511
BseNI	ACTGG	4 cut(s)	305, 716, 1590, 2754
BseRI	GAGGAG	2 cut(s)	1643, 1955
BseSI	GKGCMC	2 cut(s)	995, 2517
BseXI	GCAGC	6 cut(s)	899, 1087, 1306, 1334, 1354, 1399
BsgI	GTGCAG	3 cut(s)	132, 414, 1869
BshFI	GGCC	2 cut(s)	77, 2484
BshNI	GGYRCC	1 cut(s)	104
BshTI	ACCGGT	1 cut(s)	860
BsiHKAI	GWGCWC	1 cut(s)	2517
BsiHKCI	CYCGRG	1 cut(s)	616
BsiSI	CCGG	4 cut(s)	668, 861, 1332, 2770
BslFI	GGGAC	5 cut(s)	1223, 2214, 2282, 2577, 2766
BslI	CCNNNNNNNGG	6 cut(s)	70, 1595, 2480, 2650, 2749, 2769
BsmAI	GTCTC	5 cut(s)	64, 512, 652, 1022, 1063
BsmBI	CGTCTC	2 cut(s)	512, 652
BsmFI	GGGAC	5 cut(s)	1223, 2214, 2282, 2577, 2766
BsnI	GGCC	2 cut(s)	77, 2484
Bso31I	GGTCTC	2 cut(s)	64, 1063
BsoBI	CYCGRG	1 cut(s)	616
Bsp119I	TTCGAA	1 cut(s)	2731
Bsp1286I	GDGCHC	2 cut(s)	995, 2517
Bsp13I	TCCGGA	1 cut(s)	1331
Bsp1407I	TGTACA	2 cut(s)	1906, 2581
Bsp143I	GATC	9 cut(s)	29, 493, 1355, 1481, 1817, 2032, 2602, 2640, 2695
Bsp19I	CCATGG	1 cut(s)	264
BspACI	CCGC	4 cut(s)	197, 1114, 2644, 2689
BspANI	GGCC	2 cut(s)	77, 2484
BspCNI	CTCAG	4 cut(s)	1105, 1486, 1861, 2512
BspEI	TCCGGA	1 cut(s)	1331
BspHI	TCATGA	2 cut(s)	1306, 1897
BspMAI	CTGCAG	1 cut(s)	1324
BspPI	GGATC	6 cut(s)	1489, 1812, 1825, 2635, 2648, 2703
BspT104I	TTCGAA	1 cut(s)	2731
BspT107I	GGYRCC	1 cut(s)	104
BspTNI	GGTCTC	2 cut(s)	64, 1063
BsrDI	GCAATG	1 cut(s)	1525
BsrFI	RCCGGY	2 cut(s)	667, 860
BsrGI	TGTACA	2 cut(s)	1906, 2581
BsrI	ACTGG	4 cut(s)	305, 716, 1590, 2754
BssAI	RCCGGY	2 cut(s)	667, 860
BssECI	CCNNGG	6 cut(s)	78, 100, 264, 1812, 2635, 2705
BssMI	GATC	9 cut(s)	29, 493, 1355, 1481, 1817, 2032, 2602, 2640, 2695
BssNAI	GTATAC	1 cut(s)	1436
BssNI	GRCGYC	2 cut(s)	645, 1670
BssT1I	CCWWGG	4 cut(s)	264, 1812, 2635, 2705
Bst1107I	GTATAC	1 cut(s)	1436
Bst2UI	CCWGG	6 cut(s)	24, 422, 1692, 2054, 2189, 2475
Bst4CI	ACNGT	7 cut(s)	70, 82, 142, 737, 768, 1565, 1686
Bst6I	CTCTTC	4 cut(s)	393, 655, 1308, 1330
BstACI	GRCGYC	2 cut(s)	645, 1670
BstAUI	TGTACA	2 cut(s)	1906, 2581
BstBAI	YACGTR	1 cut(s)	566
BstBI	TTCGAA	1 cut(s)	2731
BstC8I	GCNNGC	7 cut(s)	393, 669, 1098, 1516, 2486, 2517, 2667
BstDSI	CCRYGG	2 cut(s)	78, 264
BstEII	GGTNACC	2 cut(s)	1765, 2183
BstENI	CCTNNNNNAGG	1 cut(s)	2478
BstF5I	GGATG	4 cut(s)	1756, 1894, 2402, 2701
BstKTI	GATC	9 cut(s)	32, 496, 1358, 1484, 1820, 2035, 2605, 2643, 2698
BstMAI	GTCTC	5 cut(s)	64, 512, 652, 1022, 1063
BstMBI	GATC	9 cut(s)	29, 493, 1355, 1481, 1817, 2032, 2602, 2640, 2695
BstMWI	GCNNNNNNNGC	9 cut(s)	422, 567, 668, 1367, 2326, 2572, 2605, 2614, 2675
BstNI	CCWGG	6 cut(s)	24, 422, 1692, 2054, 2189, 2475
BstNSI	RCATGY	1 cut(s)	1922
BstPAI	GACNNNNGTC	1 cut(s)	1563
BstPI	GGTNACC	2 cut(s)	1765, 2183
BstSCI	CCNGG	6 cut(s)	22, 420, 1690, 2052, 2187, 2473
BstSFI	CTRYAG	2 cut(s)	906, 1320
BstSLI	GKGCMC	2 cut(s)	995, 2517
BstSNI	TACGTA	1 cut(s)	566
BstV1I	GCAGC	6 cut(s)	899, 1087, 1306, 1334, 1354, 1399
BstV2I	GAAGAC	3 cut(s)	738, 1410, 1805
BstX2I	RGATCY	4 cut(s)	1355, 1481, 1817, 2640
BstYI	RGATCY	4 cut(s)	1355, 1481, 1817, 2640
BstZ17I	GTATAC	1 cut(s)	1436
BsuI	GTATCC	1 cut(s)	874
BsuRI	GGCC	2 cut(s)	77, 2484
BtgI	CCRYGG	2 cut(s)	78, 264
BtgZI	GCGATG	1 cut(s)	97
BtrI	CACGTC	1 cut(s)	835
BtsCI	GGATG	4 cut(s)	1756, 1894, 2402, 2701
BtsI	GCAGTG	2 cut(s)	1077, 2044
BtsIMutI	CAGTG	5 cut(s)	993, 1077, 1148, 1597, 2044
Cac8I	GCNNGC	7 cut(s)	393, 669, 1098, 1516, 2486, 2517, 2667
CaiI	CAGNNNCTG	1 cut(s)	890
CciI	TCATGA	2 cut(s)	1306, 1897
Cfr10I	RCCGGY	2 cut(s)	667, 860
Cfr13I	GGNCC	4 cut(s)	553, 2296, 2591, 2753
CsiI	ACCWGGT	2 cut(s)	22, 2187
Csp6I	GTAC	5 cut(s)	577, 985, 1907, 2133, 2582
CspAI	ACCGGT	1 cut(s)	860
CviQI	GTAC	5 cut(s)	577, 985, 1907, 2133, 2582
DpnI	GATC	9 cut(s)	31, 495, 1357, 1483, 1819, 2034, 2604, 2642, 2697
DpnII	GATC	9 cut(s)	29, 493, 1355, 1481, 1817, 2032, 2602, 2640, 2695
DrdI	GACNNNNNNGTC	1 cut(s)	1177
DseDI	GACNNNNNNGTC	1 cut(s)	1177
Eam1104I	CTCTTC	4 cut(s)	393, 655, 1308, 1330
EarI	CTCTTC	4 cut(s)	393, 655, 1308, 1330
Eco105I	TACGTA	1 cut(s)	566
Eco130I	CCWWGG	4 cut(s)	264, 1812, 2635, 2705
Eco31I	GGTCTC	2 cut(s)	64, 1063
Eco47I	GGWCC	4 cut(s)	553, 2296, 2591, 2753
Eco57I	CTGAAG	6 cut(s)	726, 1017, 1356, 1566, 2187, 2681
Eco88I	CYCGRG	1 cut(s)	616
Eco91I	GGTNACC	2 cut(s)	1765, 2183
EcoNI	CCTNNNNNAGG	1 cut(s)	2478
EcoO65I	GGTNACC	2 cut(s)	1765, 2183
EcoRI	GAATTC	2 cut(s)	963, 1196
EcoRII	CCWGG	6 cut(s)	22, 420, 1690, 2052, 2187, 2473
EcoT14I	CCWWGG	4 cut(s)	264, 1812, 2635, 2705
ErhI	CCWWGG	4 cut(s)	264, 1812, 2635, 2705
Esp3I	CGTCTC	2 cut(s)	512, 652
FalI	AAGNNNNNCTT	4 cut(s)	32, 64, 2438, 2470
FaqI	GGGAC	5 cut(s)	1223, 2214, 2282, 2577, 2766
FauI	CCCGC	1 cut(s)	190
FauNDI	CATATG	2 cut(s)	969, 2211
FbaI	TGATCA	1 cut(s)	493
FblI	GTMKAC	2 cut(s)	90, 1435
Fnu4HI	GCNGC	7 cut(s)	888, 1101, 1320, 1323, 1368, 1413, 2689
FokI	GGATG	4 cut(s)	1763, 1901, 2409, 2688
Fsp4HI	GCNGC	7 cut(s)	888, 1101, 1320, 1323, 1368, 1413, 2689
GluI	GCNGC	7 cut(s)	888, 1101, 1320, 1323, 1368, 1413, 2689
GsuI	CTGGAG	1 cut(s)	2075
HaeIII	GGCC	2 cut(s)	77, 2484
HapII	CCGG	4 cut(s)	668, 861, 1332, 2770
Hin1I	GRCGYC	2 cut(s)	645, 1670
HincII	GTYRAC	2 cut(s)	91, 292
HindII	GTYRAC	2 cut(s)	91, 292
HindIII	AAGCTT	2 cut(s)	1440, 2573
HpaII	CCGG	4 cut(s)	668, 861, 1332, 2770
Hpy166II	GTNNAC	5 cut(s)	91, 292, 1436, 1916, 2515
Hpy8I	GTNNAC	5 cut(s)	91, 292, 1436, 1916, 2515
Hpy99I	CGWCG	2 cut(s)	92, 647
HpyAV	CCTTC	8 cut(s)	34, 1338, 1471, 1544, 1589, 2352, 2394, 2432
HpyCH4III	ACNGT	7 cut(s)	70, 82, 142, 737, 768, 1565, 1686
HpyCH4IV	ACGT	7 cut(s)	565, 645, 834, 1167, 1670, 1977, 2103
HpyF10VI	GCNNNNNNNGC	9 cut(s)	422, 567, 668, 1367, 2326, 2572, 2605, 2614, 2675
HpySE526I	ACGT	7 cut(s)	565, 645, 834, 1167, 1670, 1977, 2103
Hsp92I	GRCGYC	2 cut(s)	645, 1670
Kpn2I	TCCGGA	1 cut(s)	1331
KroI	GCCGGC	1 cut(s)	667
KroNI	GCCGGC	1 cut(s)	669
Ksp22I	TGATCA	1 cut(s)	493
Kzo9I	GATC	9 cut(s)	29, 493, 1355, 1481, 1817, 2032, 2602, 2640, 2695
LmnI	GCTCC	5 cut(s)	1020, 1330, 2056, 2344, 2683
Lsp1109I	GCAGC	6 cut(s)	899, 1087, 1306, 1334, 1354, 1399
LweI	GCATC	7 cut(s)	307, 970, 1069, 1199, 1501, 1741, 2387
MabI	ACCWGGT	2 cut(s)	22, 2187
MaeII	ACGT	7 cut(s)	565, 645, 834, 1167, 1670, 1977, 2103
MalI	GATC	9 cut(s)	31, 495, 1357, 1483, 1819, 2034, 2604, 2642, 2697
MboI	GATC	9 cut(s)	29, 493, 1355, 1481, 1817, 2032, 2602, 2640, 2695
MfeI	CAATTG	1 cut(s)	461
MflI	RGATCY	4 cut(s)	1355, 1481, 1817, 2640
MhlI	GDGCHC	2 cut(s)	995, 2517
MlyI	GAGTC	1 cut(s)	1629
MmeI	TCCRAC	5 cut(s)	1603, 1728, 1866, 2196, 2219
MroI	TCCGGA	1 cut(s)	1331
MroNI	GCCGGC	1 cut(s)	667
MroXI	GAANNNNTTC	2 cut(s)	1288, 1654
MseI	TTAA	8 cut(s)	354, 408, 725, 1205, 1422, 1445, 1497, 1860
MslI	CAYNNNNRTG	1 cut(s)	1923
MspA1I	CMGCKG	1 cut(s)	890
MspI	CCGG	4 cut(s)	668, 861, 1332, 2770
MspR9I	CCNGG	6 cut(s)	24, 422, 1692, 2054, 2189, 2475
MunI	CAATTG	1 cut(s)	461
MvaI	CCWGG	6 cut(s)	24, 422, 1692, 2054, 2189, 2475
MwoI	GCNNNNNNNGC	9 cut(s)	422, 567, 668, 1367, 2326, 2572, 2605, 2614, 2675
NaeI	GCCGGC	1 cut(s)	669
NcoI	CCATGG	1 cut(s)	264
NdeI	CATATG	2 cut(s)	969, 2211
NdeII	GATC	9 cut(s)	29, 493, 1355, 1481, 1817, 2032, 2602, 2640, 2695
NgoMIV	GCCGGC	1 cut(s)	667
NmeAIII	GCCGAG	1 cut(s)	81
NspI	RCATGY	1 cut(s)	1922
NspV	TTCGAA	1 cut(s)	2731
PaeR7I	CTCGAG	1 cut(s)	616
PagI	TCATGA	2 cut(s)	1306, 1897
PcsI	WCGNNNNNNNCGW	1 cut(s)	132
PdiI	GCCGGC	1 cut(s)	669
PdmI	GAANNNNTTC	2 cut(s)	1288, 1654
PflMI	CCANNNNNTGG	1 cut(s)	70
PinAI	ACCGGT	1 cut(s)	860
PkrI	GCNGC	7 cut(s)	889, 1102, 1321, 1324, 1369, 1414, 2690
PleI	GAGTC	1 cut(s)	1628
PpsI	GAGTC	1 cut(s)	1628
Ppu21I	YACGTR	1 cut(s)	566
PshAI	GACNNNNGTC	1 cut(s)	1563
PshBI	ATTAAT	1 cut(s)	1422
Psp6I	CCWGG	6 cut(s)	22, 420, 1690, 2052, 2187, 2473
PspEI	GGTNACC	2 cut(s)	1765, 2183
PspGI	CCWGG	6 cut(s)	22, 420, 1690, 2052, 2187, 2473
PspPI	GGNCC	4 cut(s)	553, 2296, 2591, 2753
PspXI	VCTCGAGB	1 cut(s)	616
PsrI	GAACNNNNNNTAC	4 cut(s)	528, 560, 1419, 1451
PstI	CTGCAG	1 cut(s)	1324
PstNI	CAGNNNCTG	1 cut(s)	890
PsuI	RGATCY	4 cut(s)	1355, 1481, 1817, 2640
PvuII	CAGCTG	1 cut(s)	890
RsaI	GTAC	5 cut(s)	578, 986, 1908, 2134, 2583
RsaNI	GTAC	5 cut(s)	577, 985, 1907, 2133, 2582
RseI	CAYNNNNRTG	1 cut(s)	1923
SalI	GTCGAC	1 cut(s)	89
SaqAI	TTAA	8 cut(s)	354, 408, 725, 1205, 1422, 1445, 1497, 1860
SatI	GCNGC	7 cut(s)	888, 1101, 1320, 1323, 1368, 1413, 2689
Sau3AI	GATC	9 cut(s)	29, 493, 1355, 1481, 1817, 2032, 2602, 2640, 2695
Sau96I	GGNCC	4 cut(s)	553, 2296, 2591, 2753
SchI	GAGTC	1 cut(s)	1629
ScrFI	CCNGG	6 cut(s)	24, 422, 1692, 2054, 2189, 2475
SduI	GDGCHC	2 cut(s)	995, 2517
SexAI	ACCWGGT	2 cut(s)	22, 2187
SfaNI	GCATC	7 cut(s)	307, 970, 1069, 1199, 1501, 1741, 2387
SfcI	CTRYAG	2 cut(s)	906, 1320
Sfr274I	CTCGAG	1 cut(s)	616
SfuI	TTCGAA	1 cut(s)	2731
SinI	GGWCC	4 cut(s)	553, 2296, 2591, 2753
SlaI	CTCGAG	1 cut(s)	616
SmiMI	CAYNNNNRTG	1 cut(s)	1923
SmlI	CTYRAG	6 cut(s)	49, 377, 616, 1139, 2073, 2618
SmoI	CTYRAG	6 cut(s)	49, 377, 616, 1139, 2073, 2618
SnaBI	TACGTA	1 cut(s)	566
SpeI	ACTAGT	1 cut(s)	1781
SsiI	CCGC	4 cut(s)	197, 1114, 2644, 2689
SspI	AATATT	1 cut(s)	412
StyD4I	CCNGG	6 cut(s)	22, 420, 1690, 2052, 2187, 2473
StyI	CCWWGG	4 cut(s)	264, 1812, 2635, 2705
TaaI	ACNGT	7 cut(s)	70, 82, 142, 737, 768, 1565, 1686
TaiI	ACGT	7 cut(s)	568, 648, 837, 1170, 1673, 1980, 2106
TaqI	TCGA	6 cut(s)	28, 90, 126, 207, 617, 2731
TaqII	GACCGA	3 cut(s)	2171, 2284, 2295
TatI	WGTACW	2 cut(s)	1906, 2581
TauI	GCSGC	1 cut(s)	2691
Tru1I	TTAA	8 cut(s)	354, 408, 725, 1205, 1422, 1445, 1497, 1860
Tru9I	TTAA	8 cut(s)	354, 408, 725, 1205, 1422, 1445, 1497, 1860
TscAI	CASTG	5 cut(s)	1000, 1077, 1155, 1597, 2044
TseI	GCWGC	6 cut(s)	887, 1100, 1319, 1322, 1367, 1412
TspGWI	ACGGA	2 cut(s)	1277, 2009
TspRI	CASTG	5 cut(s)	1000, 1077, 1155, 1597, 2044
Van91I	CCANNNNNTGG	1 cut(s)	70
VneI	GTGCAC	1 cut(s)	2513
VpaK11BI	GGWCC	4 cut(s)	553, 2296, 2591, 2753
VspI	ATTAAT	1 cut(s)	1422
XagI	CCTNNNNNAGG	1 cut(s)	2478
XapI	RAATTY	7 cut(s)	796, 963, 1196, 1297, 1390, 1878, 2155
XceI	RCATGY	1 cut(s)	1922
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1069, 2471
XhoI	CTCGAG	1 cut(s)	616
XmiI	GTMKAC	2 cut(s)	90, 1435
XmnI	GAANNNNTTC	2 cut(s)	1288, 1654
ZraI	GACGTC	2 cut(s)	646, 1671

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.