pycom16g09600

Protein of unknown function (DUF3537)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0007442
Physical Location & Seq
Reverse (-)
6403289 .. 6407489
4201 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1221 bp
ATGGCGGACCCTCTAAAAGGAGAGGATCCGCCTTCCCAACTCACCCTTCTTCTCGATTCAAATCACAACAACGGTCACCAAGCACCAGAAGGAGAATGCAAAGATACCCAATTGGACCAGACCCTCCAACGGCTAGAAACGTTTCTCACTCTATTGGGCTTCAGTCAATCTTCTTGGTTGAGGTTTGCGCTGTCCTGGACTGCTCTGGTTCTTCTCGGTGTTGTTCTCCCGGTGGTGGTGCTAGAGATATTCAACTGTTCGGACTGCGACAAGTATCAGATTAAATGGTTCGAGCTCACTATCGTGGCATCGCAGGCGGTTCTGGCGGCGGTCTCTTTGCTCTGCATCTCTCACTGTCTTCGCAAGTATGGCATTCGGAGGTTCCTCTTTGTTGATCGCTATAGTGGCCGTATCGTTCGGTTTCGAAACGATTACATCAAGCAGATTAAGGATTCTTTACGTCTGCTCATTTGGTGGGCACTGCCATGTTTTCTTTTGAAAACTCTGCGAGAGGTCATCCGCATGATATATGTCCGTCACGAGTCATGGTGGCTGTCATTTGCTGTATTAGTAGCTTTGGTTCTATCATGGGCTTATGTGAGTACAATCACTCTAACAGCCAGCATTTTGTTTCACTTGGTCTGCAACTTGCAAGTTATCCACTTTGATGATTATGGAAGGCTCTTTGAAAGGGATTCTAATGTGTTGCTATTTATGGAGGAGCATATTCGCCTGCGGTATCATCTCCATAAAATAAGCCATAGGTTCAGGATCTTCCTTCTTGTGCAGTTTATAATCGTCACCACAAGCCAGTTTGTGACTCTACTCGAGCTCACAATATACAGTGGAAAAATCACTGTAATAAACAGTGGCGATTTTGCAGTCTCCACAATTGTTCAGGTTGTCGGCATTACTATTTCCCTGCACGCAGCTACTAAAATTTCTGGTAGAGCCCAAGGTATAACGACAGTTGCCAGTAGATGGCATGCGTTAATGACATGCAGTTCTAACAATTCATCTCACAACAGAAGTTCAGACAGTTTGATGAACTTTGAGGCCGCCAACAGATTGAGTTCACTGCATATAAGTTACTCTGAGAGTGATTTGGAGTCAGCAGATTATGTTCACGTGCCTACAAATTCCCAGCTGGCTTCACATATGGCTTCATATCACAAGAGACAAGCTTTTGTGTACAAGGGTATATGGAGGGGGAATAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3537

Protein Analysis

407

Amino Acids

46.46

Weight (kDa)

8.85

Isoelectric Point (pI)

34.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF3537 PF12056 41 - 397 8.1e-126 Protein of unknown function (DUF3537)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 794
AccB7I CCANNNNNTGG 1 cut(s) 981
AciI CCGC 8 cut(s) 5, 29, 317, 326, 329, 520, 736, 1059
AclI AACGTT 1 cut(s) 140
AclWI GGATC 3 cut(s) 20, 33, 779
AcoI YGGCCR 1 cut(s) 406
AcsI RAATTY 2 cut(s) 939, 1138
AcuI CTGAAG 1 cut(s) 145
AcvI CACGTG 1 cut(s) 1129
AfaI GTAC 2 cut(s) 604, 1193
AfiI CCNNNNNNNGG 4 cut(s) 17, 129, 235, 981
AgsI TTSAA 4 cut(s) 60, 253, 499, 689
AjnI CCWGG 1 cut(s) 194
AjuI GAANNNNNNNTTGG 2 cut(s) 30, 62
AleI CACNNNNGTG 1 cut(s) 302
AluBI AGCT 6 cut(s) 295, 575, 832, 932, 1147, 1184
AluI AGCT 6 cut(s) 295, 575, 832, 932, 1147, 1184
Alw21I GWGCWC 2 cut(s) 297, 834
Alw26I GTCTC 3 cut(s) 337, 889, 1171
AlwI GGATC 3 cut(s) 20, 33, 779
Ama87I CYCGRG 1 cut(s) 827
AoxI GGCC 2 cut(s) 406, 1056
ApeKI GCWGC 1 cut(s) 929
ApoI RAATTY 2 cut(s) 939, 1138
Asp700I GAANNNNTTC 1 cut(s) 141
AspLEI GCGC 1 cut(s) 190
AspS9I GGNCC 2 cut(s) 7, 115
AsuC2I CCSGG 1 cut(s) 230
AsuHPI GGTGA 3 cut(s) 34, 68, 793
AsuII TTCGAA 1 cut(s) 424
AvaI CYCGRG 1 cut(s) 827
AvaII GGWCC 2 cut(s) 7, 115
BaeGI GKGCMC 1 cut(s) 481
BamHI GGATCC 1 cut(s) 25
BanII GRGCYC 3 cut(s) 297, 834, 955
BauI CACGAG 1 cut(s) 539
BbrPI CACGTG 1 cut(s) 1129
BbsI GAAGAC 1 cut(s) 350
Bbv12I GWGCWC 2 cut(s) 297, 834
BbvI GCAGC 1 cut(s) 941
BccI CCATC 1 cut(s) 975
BceAI ACGGC 2 cut(s) 146, 393
BciT130I CCWGG 1 cut(s) 196
BcnI CCSGG 1 cut(s) 230
BcoDI GTCTC 3 cut(s) 337, 889, 1171
BfaI CTAG 2 cut(s) 134, 242
BfmI CTRYAG 1 cut(s) 400
BisI GCNGC 3 cut(s) 327, 930, 1059
BlsI GCNGC 3 cut(s) 328, 931, 1060
Bme1390I CCNGG 2 cut(s) 196, 230
Bme18I GGWCC 2 cut(s) 7, 115
BmeT110I CYCGRG 1 cut(s) 827
BmgT120I GGNCC 2 cut(s) 7, 115
BmiI GGNNCC 3 cut(s) 9, 27, 383
BmrFI CCNGG 2 cut(s) 196, 230
BmsI GCATC 2 cut(s) 317, 354
BpiI GAAGAC 1 cut(s) 350
Bpu14I TTCGAA 1 cut(s) 424
BpuMI CCSGG 1 cut(s) 230
BsaAI YACGTR 1 cut(s) 1129
BsaBI GATNNNNATC 1 cut(s) 60
BsaI GGTCTC 1 cut(s) 337
BsaJI CCNNGG 1 cut(s) 955
Bsc4I CCNNNNNNNGG 4 cut(s) 17, 129, 235, 981
Bse1I ACTGG 2 cut(s) 811, 975
Bse8I GATNNNNATC 1 cut(s) 60
BseBI CCWGG 1 cut(s) 196
BseDI CCNNGG 1 cut(s) 955
BseGI GGATG 1 cut(s) 516
BseJI GATNNNNATC 1 cut(s) 60
BseLI CCNNNNNNNGG 4 cut(s) 17, 129, 235, 981
BseMII CTCAG 1 cut(s) 1086
BseNI ACTGG 2 cut(s) 811, 975
BseRI GAGGAG 1 cut(s) 734
BseSI GKGCMC 1 cut(s) 481
BseXI GCAGC 1 cut(s) 941
BseYI CCCAGC 1 cut(s) 1143
BsgI GTGCAG 2 cut(s) 806, 908
BshFI GGCC 2 cut(s) 408, 1058
BsiHKAI GWGCWC 2 cut(s) 297, 834
BsiHKCI CYCGRG 1 cut(s) 827
BsiSI CCGG 1 cut(s) 230
BslI CCNNNNNNNGG 4 cut(s) 17, 129, 235, 981
BsmAI GTCTC 3 cut(s) 337, 889, 1171
BsmI GAATGC 2 cut(s) 101, 372
BsnI GGCC 2 cut(s) 408, 1058
Bso31I GGTCTC 1 cut(s) 337
BsoBI CYCGRG 1 cut(s) 827
Bsp119I TTCGAA 1 cut(s) 424
Bsp1286I GDGCHC 4 cut(s) 297, 481, 834, 955
Bsp1407I TGTACA 1 cut(s) 1191
Bsp143I GATC 3 cut(s) 25, 394, 771
BspACI CCGC 8 cut(s) 5, 29, 317, 326, 329, 520, 736, 1059
BspANI GGCC 2 cut(s) 408, 1058
BspCNI CTCAG 1 cut(s) 1087
BspLI GGNNCC 3 cut(s) 9, 27, 383
BspPI GGATC 3 cut(s) 20, 33, 779
BspT104I TTCGAA 1 cut(s) 424
BspTNI GGTCTC 1 cut(s) 337
BsrGI TGTACA 1 cut(s) 1191
BsrI ACTGG 2 cut(s) 811, 975
BssECI CCNNGG 1 cut(s) 955
BssMI GATC 3 cut(s) 25, 394, 771
BssSI CACGAG 1 cut(s) 539
BssT1I CCWWGG 1 cut(s) 955
Bst2BI CACGAG 1 cut(s) 539
Bst2UI CCWGG 1 cut(s) 196
Bst4CI ACNGT 8 cut(s) 74, 257, 356, 845, 859, 869, 970, 1040
BstAUI TGTACA 1 cut(s) 1191
BstBAI YACGTR 1 cut(s) 1129
BstBI TTCGAA 1 cut(s) 424
BstC8I GCNNGC 6 cut(s) 315, 622, 734, 927, 987, 1149
BstDEI CTNAG 1 cut(s) 1095
BstEII GGTNACC 1 cut(s) 74
BstENI CCTNNNNNAGG 1 cut(s) 15
BstF5I GGATG 1 cut(s) 516
BstHHI GCGC 1 cut(s) 190
BstKTI GATC 3 cut(s) 28, 397, 774
BstMAI GTCTC 3 cut(s) 337, 889, 1171
BstMBI GATC 3 cut(s) 25, 394, 771
BstMWI GCNNNNNNNGC 4 cut(s) 314, 323, 369, 405
BstNI CCWGG 1 cut(s) 196
BstNSI RCATGY 2 cut(s) 989, 1002
BstPI GGTNACC 1 cut(s) 74
BstSCI CCNGG 2 cut(s) 194, 228
BstSFI CTRYAG 1 cut(s) 400
BstSLI GKGCMC 1 cut(s) 481
BstV1I GCAGC 1 cut(s) 941
BstV2I GAAGAC 1 cut(s) 350
BstX2I RGATCY 2 cut(s) 25, 771
BstYI RGATCY 2 cut(s) 25, 771
BsuRI GGCC 2 cut(s) 408, 1058
BtgZI GCGATG 1 cut(s) 294
BtsCI GGATG 1 cut(s) 516
BtsI GCAGTG 2 cut(s) 479, 1076
BtsIMutI CAGTG 6 cut(s) 352, 479, 850, 855, 874, 1076
Cac8I GCNNGC 6 cut(s) 315, 622, 734, 927, 987, 1149
CfoI GCGC 1 cut(s) 190
Cfr13I GGNCC 2 cut(s) 7, 115
Csp6I GTAC 2 cut(s) 603, 1192
CviAII CATG 6 cut(s) 486, 523, 546, 588, 986, 999
CviQI GTAC 2 cut(s) 603, 1192
DdeI CTNAG 1 cut(s) 1095
DpnI GATC 3 cut(s) 27, 396, 773
DpnII GATC 3 cut(s) 25, 394, 771
EaeI YGGCCR 1 cut(s) 406
EciI GGCGGA 2 cut(s) 18, 20
Ecl136II GAGCTC 2 cut(s) 295, 832
Eco130I CCWWGG 1 cut(s) 955
Eco24I GRGCYC 3 cut(s) 297, 834, 955
Eco31I GGTCTC 1 cut(s) 337
Eco47I GGWCC 2 cut(s) 7, 115
Eco53kI GAGCTC 2 cut(s) 295, 832
Eco57I CTGAAG 1 cut(s) 145
Eco72I CACGTG 1 cut(s) 1129
Eco88I CYCGRG 1 cut(s) 827
Eco91I GGTNACC 1 cut(s) 74
EcoICRI GAGCTC 2 cut(s) 295, 832
EcoNI CCTNNNNNAGG 1 cut(s) 15
EcoO65I GGTNACC 1 cut(s) 74
EcoRII CCWGG 1 cut(s) 194
EcoT14I CCWWGG 1 cut(s) 955
EcoT38I GRGCYC 3 cut(s) 297, 834, 955
ErhI CCWWGG 1 cut(s) 955
FaeI CATG 6 cut(s) 489, 526, 549, 591, 989, 1002
FatI CATG 6 cut(s) 485, 522, 545, 587, 985, 998
FauNDI CATATG 1 cut(s) 1158
Fnu4HI GCNGC 3 cut(s) 327, 930, 1059
FokI GGATG 1 cut(s) 503
FriOI GRGCYC 3 cut(s) 297, 834, 955
Fsp4HI GCNGC 3 cut(s) 327, 930, 1059
FspBI CTAG 2 cut(s) 134, 242
GlaI GCGC 1 cut(s) 189
GluI GCNGC 3 cut(s) 327, 930, 1059
GsaI CCCAGC 1 cut(s) 1147
HaeIII GGCC 2 cut(s) 408, 1058
HapII CCGG 1 cut(s) 230
HhaI GCGC 1 cut(s) 190
Hin1II CATG 6 cut(s) 489, 526, 549, 591, 989, 1002
Hin6I GCGC 1 cut(s) 188
HinP1I GCGC 1 cut(s) 188
HindIII AAGCTT 1 cut(s) 1182
HinfI GANTC 6 cut(s) 56, 452, 542, 695, 820, 1109
HpaII CCGG 1 cut(s) 230
HphI GGTGA 3 cut(s) 34, 68, 793
Hpy166II GTNNAC 3 cut(s) 1076, 1126, 1192
Hpy188I TCNGA 5 cut(s) 262, 279, 378, 1036, 1096
Hpy188III TCNNGA 3 cut(s) 53, 539, 769
Hpy8I GTNNAC 3 cut(s) 1076, 1126, 1192
HpyAV CCTTC 5 cut(s) 42, 56, 83, 672, 788
HpyCH4III ACNGT 8 cut(s) 74, 257, 356, 845, 859, 869, 970, 1040
HpyCH4IV ACGT 3 cut(s) 140, 460, 1128
HpyCH4V TGCA 9 cut(s) 99, 345, 645, 652, 787, 881, 925, 1002, 1081
HpyF10VI GCNNNNNNNGC 4 cut(s) 314, 323, 369, 405
HpyF3I CTNAG 1 cut(s) 1095
HpySE526I ACGT 3 cut(s) 140, 460, 1128
Hsp92II CATG 6 cut(s) 489, 526, 549, 591, 989, 1002
HspAI GCGC 1 cut(s) 188
Kzo9I GATC 3 cut(s) 25, 394, 771
LmnI GCTCC 1 cut(s) 721
Lsp1109I GCAGC 1 cut(s) 941
LweI GCATC 2 cut(s) 317, 354
MaeI CTAG 2 cut(s) 134, 242
MaeII ACGT 3 cut(s) 140, 460, 1128
MaeIII GTNAC 5 cut(s) 74, 536, 799, 817, 1088
MalI GATC 3 cut(s) 27, 396, 773
MboI GATC 3 cut(s) 25, 394, 771
MboII GAAGA 5 cut(s) 41, 162, 203, 350, 766
MfeI CAATTG 2 cut(s) 110, 891
MflI RGATCY 2 cut(s) 25, 771
MhlI GDGCHC 4 cut(s) 297, 481, 834, 955
MluCI AATT 5 cut(s) 110, 891, 939, 1012, 1138
MlyI GAGTC 3 cut(s) 551, 814, 1118
MmeI TCCRAC 1 cut(s) 151
MroXI GAANNNNTTC 1 cut(s) 141
MseI TTAA 3 cut(s) 282, 447, 992
MslI CAYNNNNRTG 4 cut(s) 302, 484, 521, 666
MspA1I CMGCKG 1 cut(s) 1147
MspI CCGG 1 cut(s) 230
MspR9I CCNGG 2 cut(s) 196, 230
MunI CAATTG 2 cut(s) 110, 891
Mva1269I GAATGC 2 cut(s) 101, 372
MvaI CCWGG 1 cut(s) 196
MwoI GCNNNNNNNGC 4 cut(s) 314, 323, 369, 405
NciI CCSGG 1 cut(s) 230
NdeI CATATG 1 cut(s) 1158
NdeII GATC 3 cut(s) 25, 394, 771
NlaIII CATG 6 cut(s) 489, 526, 549, 591, 989, 1002
NlaIV GGNNCC 3 cut(s) 9, 27, 383
NmuCI GTSAC 4 cut(s) 74, 536, 799, 817
NspI RCATGY 2 cut(s) 989, 1002
NspV TTCGAA 1 cut(s) 424
OliI CACNNNNGTG 1 cut(s) 302
PaeI GCATGC 1 cut(s) 989
PaeR7I CTCGAG 1 cut(s) 827
PctI GAATGC 2 cut(s) 101, 372
PdmI GAANNNNTTC 1 cut(s) 141
PfeI GAWTC 3 cut(s) 56, 452, 695
PflMI CCANNNNNTGG 1 cut(s) 981
PfoI TCCNGGA 1 cut(s) 194
PkrI GCNGC 3 cut(s) 328, 931, 1060
PleI GAGTC 3 cut(s) 550, 814, 1117
PmaCI CACGTG 1 cut(s) 1129
PmlI CACGTG 1 cut(s) 1129
PpsI GAGTC 3 cut(s) 550, 814, 1117
Ppu21I YACGTR 1 cut(s) 1129
PsiI TTATAA 1 cut(s) 794
Psp124BI GAGCTC 2 cut(s) 297, 834
Psp1406I AACGTT 1 cut(s) 140
Psp6I CCWGG 1 cut(s) 194
PspCI CACGTG 1 cut(s) 1129
PspEI GGTNACC 1 cut(s) 74
PspFI CCCAGC 1 cut(s) 1143
PspGI CCWGG 1 cut(s) 194
PspN4I GGNNCC 3 cut(s) 9, 27, 383
PspPI GGNCC 2 cut(s) 7, 115
PspXI VCTCGAGB 1 cut(s) 827
PsrI GAACNNNNNNTAC 2 cut(s) 564, 596
PsuI RGATCY 2 cut(s) 25, 771
PvuII CAGCTG 1 cut(s) 1147
RsaI GTAC 2 cut(s) 604, 1193
RsaNI GTAC 2 cut(s) 603, 1192
RseI CAYNNNNRTG 4 cut(s) 302, 484, 521, 666
SacI GAGCTC 2 cut(s) 297, 834
SaqAI TTAA 3 cut(s) 282, 447, 992
SatI GCNGC 3 cut(s) 327, 930, 1059
Sau3AI GATC 3 cut(s) 25, 394, 771
Sau96I GGNCC 2 cut(s) 7, 115
SchI GAGTC 3 cut(s) 551, 814, 1118
ScrFI CCNGG 2 cut(s) 196, 230
SduI GDGCHC 4 cut(s) 297, 481, 834, 955
SfaNI GCATC 2 cut(s) 317, 354
SfcI CTRYAG 1 cut(s) 400
Sfr274I CTCGAG 1 cut(s) 827
SfuI TTCGAA 1 cut(s) 424
SinI GGWCC 2 cut(s) 7, 115
SlaI CTCGAG 1 cut(s) 827
SmiMI CAYNNNNRTG 4 cut(s) 302, 484, 521, 666
SmlI CTYRAG 1 cut(s) 827
SmoI CTYRAG 1 cut(s) 827
SphI GCATGC 1 cut(s) 989
Sse9I AATT 5 cut(s) 110, 891, 939, 1012, 1138
SsiI CCGC 8 cut(s) 5, 29, 317, 326, 329, 520, 736, 1059
SspMI CTAG 2 cut(s) 134, 242
SstI GAGCTC 2 cut(s) 297, 834
StyD4I CCNGG 2 cut(s) 194, 228
StyI CCWWGG 1 cut(s) 955
TaaI ACNGT 8 cut(s) 74, 257, 356, 845, 859, 869, 970, 1040
TaiI ACGT 3 cut(s) 143, 463, 1131
TaqI TCGA 4 cut(s) 54, 291, 424, 828
TasI AATT 5 cut(s) 110, 891, 939, 1012, 1138
TatI WGTACW 2 cut(s) 602, 1191
TauI GCSGC 2 cut(s) 329, 1061
TfiI GAWTC 3 cut(s) 56, 452, 695
Tru1I TTAA 3 cut(s) 282, 447, 992
Tru9I TTAA 3 cut(s) 282, 447, 992
TscAI CASTG 6 cut(s) 359, 486, 850, 862, 874, 1083
TseFI GTSAC 4 cut(s) 74, 536, 799, 817
TseI GCWGC 1 cut(s) 929
Tsp45I GTSAC 4 cut(s) 74, 536, 799, 817
TspDTI ATGAA 3 cut(s) 1005, 1061, 1155
TspGWI ACGGA 1 cut(s) 524
TspRI CASTG 6 cut(s) 359, 486, 850, 862, 874, 1083
Van91I CCANNNNNTGG 1 cut(s) 981
VpaK11BI GGWCC 2 cut(s) 7, 115
XagI CCTNNNNNAGG 1 cut(s) 15
XapI RAATTY 2 cut(s) 939, 1138
XceI RCATGY 2 cut(s) 989, 1002
XhoI CTCGAG 1 cut(s) 827
XmnI GAANNNNTTC 1 cut(s) 141
XspI CTAG 2 cut(s) 134, 242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.