Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0003761

Physical Location & Seq

Genomic Coordinates Reverse (-)

16566436 .. 16575213

Gene Structure 8778 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2418 bp

ATGGCTTCAGCTCAGGTACTACCCAACTCGCGAAAGCAAGATCTTTTGGAAGCCGGAAAGCGCCGGCTGGAGGAGTTTCGGAAGAAAAAAGCAACAGACCGAGCAAAGAAGGCTTCACCCACTAGCCAAATCGATGCTTCTGAAGTTAGCTCAAACGAGAAACAATCTCTAGAAACTGAACATGTACGAGTTACATCCTCTGATGGTGCTGGTACATCTGATGGGCCCAGTAGTGCTTTTACTGAAACTTCTTCTGTATTATTGAACAATGATAGCCATGCGATTGATTTTTTGCAAAAAAATGAACAAGCTTCTGTGGATAATAATACACACAGTAGTCCTTCAACCTCTGAGTTTAATGCATATTCTGGAGATCAAGTACATAAACATGCTGATCAAGAATATCAGAGATATGGTGGTTTAGGGTTTGGGGGACCACTGGCCGTTAATAATCGCCATGGGACTAATGGGATAAGTAATGATTTTGAAAAATATACTGGTGCCTTAGGTGGGACAACATCTGACCAGTCTATTGCTCCACGCCCACTAGCAAGTCAAGATTTTGCGGGCAATACAAGTCACTCCAGTTCTTATGGAAGGAACGAATTTCAGTCCAAAGAACATAATACATCTTTAATGGATTCTGGTTCTTCACATCCATCTGTTGCAAAAATCTCATCTCAGAACCCTGTCAGCACATTATTACTACAGAGTGAGGCCTCTAATGTCAGCACAGTGTCTGGTGGTCCTACACTGTCTTCACTTTATGAAGACTTGGTTGAACCCAGTCCCAGCATAAGAGGATTTGCTTCTGAAGTTGGTAAAAACATCCGCGGTAGTAGTGAGGACTTAAGTGATTCTCTGAGTTATAAATTTGGGGAAGGAAAGCTTAGCAGCTTTGCCAGTAGCATTTCTAGTGGGCAGAGTGCACCAGTTCAAACGTATGAATCCATGGGGGGTTTTGGATCTGATTCTAGAGGTTCCTCCAATCATGCATCATTGTATTCAGTTACGCCTGAAACTGATTCTCGGAGATCTCGTCCATCCTTCCTTGATTCTCTTAATGTGTCTAAAACTTCTTCAGGCACTGTTTCTCAACAACCTGAACCAGAAAGGCCATTTATGTCCAACAGTTCTAAATCAAGTGGCATGAATTTTCTAGGTTCATTGCCTTTCCACAAGCCATCTATGGATGATGATACTGTGAGACCCTTTTTAAAGTTTGAAACGGGTGCACCTCATGCATCTGAGCCTTCCATGAAGTCTTCACTTTCTCCTAATGCTTGGATGGACCAGCAGAGGCCAACAGTTGAGGGGCATAGTATGGAGAGAAAGCATGAATTTTATTCTCCTAATCAGAATGAAGATTTTTCTGCTTTGGAACAGCATATTGAAGATCTGACACAAGAAAAGTTCTCTTTGCAACGAGCACTTGAGGCTTCACGTGCTTTAGCAGAGTCATTGGCTGCTGAAAATTCTTCTTTGACAGAGAGTTATAACCAACAGAGAACTGTTGTTGATCAACTAAAATCTGACTTGGAAAATATACAGGAGGAAATCAAACACCAGCTGGTGGAACTTGATGCGGTCAGAAATGAATATGCAAATGCACAGCTAGAATGTAATGCCGCTGATGAACGTGCTAAGCTATTGGCATCCGAAGTTATCGGATTAGAGGAGAAGGCATTAAGACTAAGGTCCAGTGAGCTAAAGCTGGAGAGGCAATTGGAGAACTCACAGGCTGAAATCTCGTCGTACAAGAAAAGAATGTCCAGCCTAGAAAAAGATCGTTCAGATTTGCAGTCAACTATCAATGCTCTTCAGGAAGAGAAGAAGCTGTTGCAGTCTATGCTACGGAAAGCCTCCACAAGTGGAAAGAAAGTTGATGTCAGCAAGAGTACTATTAACAACAAAGATGTGTCTACTTCTACAGAAGATCTAGTTGAGGAAAATGAAGACGCTATTCCTGACACCTTAGGCCAAGAAAGGGGTGATGCCTCGAGTTTCCCAATGCTGCCTGAAAATGGACAGTCAACTTTTGACATTTCATCTGTGAATCTACCTCCCGATCAGATGCGAACAGTTGAAAACATCAGTACACTAATTTCCGAGTTAGCATTGGAGAAAGAAGAATTGATACAATCTTTGGCATCCGAGTCATCTCAATGTTCCAAGCTAAAGGAGCTGAACAATGAATTGTCTCGGAAACTTGAAGCCCAAACTCAGAGATTAGAGCTTTTGACAGCCCAAAGTATGGCTCATGAGAATACTCTCGTCAGACAACCCACTCCTGTTGATATGCCGTACAATGCTCCATATGCAGATGAAGGTGATGAGGTAGTGGAAAGAGTTTTGGGATGGATTATGAAGCTTTTCCCTGGAGGGCCATCAAAGCGAAGAACTAGTAAGCTTCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009889 GO:0009908 GO:0009965 GO:0009987 GO:0010016 GO:0010026 GO:0010090 GO:0010091 GO:0010154 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048316 GO:0048366 GO:0048367 GO:0048468 GO:0048518 GO:0048522 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051302 GO:0051781 GO:0060255 GO:0061458 GO:0065007 GO:0071840 GO:0080090 GO:0090558 GO:0090567 GO:0090626 GO:0090698 GO:0099402 GO:1903506 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

806

Amino Acids

88.07

Weight (kDa)

5.08

Isoelectric Point (pI)

59.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003761)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23980
fragaria_vesca	FvH4_4g05311 FvH4_4g05311 FvH4_4g05311 FvH4_4g05311
malus_domestica	MD13G1227500.v1.1 MD16G1232700.v1.1
prunus_persica	Prupe.1G054700_v2.0.a1 Prupe.1G054700_v2.0.a1
pyrus_communis	pycom16g19470
rosa_chinensis	RchiOBHm_Chr4g0396341
rosa_laevigata	RLG00000009549
rosa_multiflora	Rmu_ssc0000234.1_g000016
rosa_roxburghii	Rroxscaffold_5G00341160 Rroxscaffold_7G00160200
rosa_rugosa	Rorug03G0349900 Rorug03G0350000 Rorug03G0350100 Rorug03G0350200 Rorug03G0350300
rosa_samantha	Rh1CG210400 Rh2BG187800 Rh3BG188400 Rh4BG066500 Rh4CG073300 Rh4DG063400 Rh5BG463000 Rh5CG484900 Rh6AG475600 Rh6BG312700 Rh6CG021900 Rh6DG022000 Rh7DG258100
rosa_wichuraiana	Rw4G005470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	870, 1497
AccB1I	GGYRCC	1 cut(s)	500
AccB7I	CCANNNNNTGG	2 cut(s)	1573, 2254
AccI	GTMKAC	1 cut(s)	1922
AccII	CGCG	2 cut(s)	31, 834
AciI	CCGC	5 cut(s)	566, 832, 834, 1586, 1629
AclWI	GGATC	1 cut(s)	973
AcoI	YGGCCR	1 cut(s)	441
AcsI	RAATTY	5 cut(s)	605, 872, 1153, 1340, 1474
AcuI	CTGAAG	4 cut(s)	162, 834, 1065, 1805
AcvI	CACGTG	1 cut(s)	1445
AfaI	GTAC	8 cut(s)	18, 186, 214, 381, 1757, 1900, 2098, 2306
AfiI	CCNNNNNNNGG	6 cut(s)	70, 510, 1573, 1987, 2024, 2254
AflII	CTTAAG	1 cut(s)	850
AflIII	ACRYGT	1 cut(s)	181
AgsI	TTSAA	9 cut(s)	265, 345, 488, 782, 938, 1226, 1394, 2087, 2213
AhlI	ACTAGT	1 cut(s)	2402
AjnI	CCWGG	1 cut(s)	2377
Alw21I	GWGCWC	3 cut(s)	931, 1237, 1432
Alw26I	GTCTC	2 cut(s)	1201, 2205
Alw44I	GTGCAC	2 cut(s)	927, 1233
AlwI	GGATC	1 cut(s)	973
AlwNI	CAGNNNCTG	2 cut(s)	740, 1088
Ama87I	CYCGRG	1 cut(s)	1999
AoxI	GGCC	7 cut(s)	224, 441, 717, 1115, 1301, 1978, 2384
ApaI	GGGCCC	1 cut(s)	228
ApaLI	GTGCAC	2 cut(s)	927, 1233
ApeKI	GCWGC	3 cut(s)	894, 1466, 2014
ApoI	RAATTY	5 cut(s)	605, 872, 1153, 1340, 1474
Asp700I	GAANNNNTTC	1 cut(s)	2372
AspLEI	GCGC	1 cut(s)	63
AspS9I	GGNCC	7 cut(s)	224, 225, 434, 746, 1291, 1698, 2384
AsuHPI	GGTGA	3 cut(s)	108, 2003, 2342
AvaI	CYCGRG	1 cut(s)	1999
AvaII	GGWCC	4 cut(s)	434, 746, 1291, 1698
AxyI	CCTNAGG	2 cut(s)	505, 1975
BaeGI	GKGCMC	3 cut(s)	228, 931, 1237
BanI	GGYRCC	1 cut(s)	500
BanII	GRGCYC	1 cut(s)	228
BarI	GAAGNNNNNNTAC	2 cut(s)	2121, 2153
BbrPI	CACGTG	1 cut(s)	1445
BbsI	GAAGAC	4 cut(s)	750, 777, 1257, 1962
Bbv12I	GWGCWC	3 cut(s)	931, 1237, 1432
BbvI	GCAGC	3 cut(s)	906, 1453, 2001
BccI	CCATC	8 cut(s)	197, 215, 667, 1051, 1192, 1282, 2352, 2395
BceAI	ACGGC	2 cut(s)	428, 2287
BciT130I	CCWGG	1 cut(s)	2379
BclI	TGATCA	2 cut(s)	394, 1519
BcoDI	GTCTC	2 cut(s)	1201, 2205
BcuI	ACTAGT	1 cut(s)	2402
BfmI	CTRYAG	2 cut(s)	707, 1929
BfoI	RGCGCY	1 cut(s)	64
BfrI	CTTAAG	1 cut(s)	850
BglII	AGATCT	4 cut(s)	40, 1034, 1396, 1936
BisI	GCNGC	4 cut(s)	895, 1467, 1629, 2015
BlpI	GCTNAGC	2 cut(s)	890, 1644
BlsI	GCNGC	4 cut(s)	896, 1468, 1630, 2016
BmcAI	AGTACT	1 cut(s)	1900
Bme1390I	CCNGG	1 cut(s)	2379
Bme18I	GGWCC	4 cut(s)	434, 746, 1291, 1698
BmeT110I	CYCGRG	1 cut(s)	1999
BmgT120I	GGNCC	7 cut(s)	224, 225, 434, 746, 1291, 1698, 2384
BmiI	GGNNCC	4 cut(s)	226, 435, 502, 982
BmrFI	CCNGG	1 cut(s)	2379
BmrI	ACTGGG	2 cut(s)	222, 780
BmsI	GCATC	8 cut(s)	124, 1004, 1253, 1573, 1664, 1984, 2064, 2159
BmuI	ACTGGG	2 cut(s)	222, 780
BoxI	GACNNNNGTC	1 cut(s)	1696
BpiI	GAAGAC	4 cut(s)	750, 777, 1257, 1962
BpmI	CTGGAG	5 cut(s)	89, 390, 568, 1736, 2400
Bpu10I	CCTNAGC	1 cut(s)	12
Bpu1102I	GCTNAGC	2 cut(s)	890, 1644
BpuEI	CTTGAG	1 cut(s)	1454
Bsa29I	ATCGAT	1 cut(s)	132
BsaAI	YACGTR	1 cut(s)	1445
BsaI	GGTCTC	1 cut(s)	1201
BsaJI	CCNNGG	4 cut(s)	457, 832, 951, 2377
BsaXI	ACNNNNNCTCC	4 cut(s)	363, 393, 1024, 1054
Bsc4I	CCNNNNNNNGG	6 cut(s)	70, 510, 1573, 1987, 2024, 2254
Bse118I	RCCGGY	1 cut(s)	63
Bse1I	ACTGG	9 cut(s)	228, 444, 502, 526, 585, 786, 903, 932, 1701
Bse21I	CCTNAGG	2 cut(s)	505, 1975
Bse3DI	GCAATG	1 cut(s)	1166
BseBI	CCWGG	1 cut(s)	2379
BseCI	ATCGAT	1 cut(s)	132
BseDI	CCNNGG	4 cut(s)	457, 832, 951, 2377
BseGI	GGATG	9 cut(s)	194, 655, 828, 1043, 1198, 1293, 1655, 2150, 2363
BseLI	CCNNNNNNNGG	6 cut(s)	70, 510, 1573, 1987, 2024, 2254
BseMI	GCAATG	1 cut(s)	1166
BseMII	CTCAG	6 cut(s)	26, 342, 695, 854, 1239, 2237
BseNI	ACTGG	9 cut(s)	228, 444, 502, 526, 585, 786, 903, 932, 1701
BseRI	GAGGAG	2 cut(s)	86, 1691
BseSI	GKGCMC	3 cut(s)	228, 931, 1237
BseXI	GCAGC	3 cut(s)	906, 1453, 2001
BseYI	CCCAGC	1 cut(s)	791
Bsh1236I	CGCG	2 cut(s)	31, 834
BshFI	GGCC	7 cut(s)	226, 443, 719, 1117, 1303, 1980, 2386
BshNI	GGYRCC	1 cut(s)	500
BshVI	ATCGAT	1 cut(s)	132
BsiHKAI	GWGCWC	3 cut(s)	931, 1237, 1432
BsiHKCI	CYCGRG	1 cut(s)	1999
BsiSI	CCGG	2 cut(s)	54, 64
BslFI	GGGAC	4 cut(s)	447, 475, 526, 774
BslI	CCNNNNNNNGG	6 cut(s)	70, 510, 1573, 1987, 2024, 2254
BsmAI	GTCTC	2 cut(s)	1201, 2205
BsmFI	GGGAC	4 cut(s)	447, 475, 526, 774
BsnI	GGCC	7 cut(s)	226, 443, 719, 1117, 1303, 1980, 2386
Bso31I	GGTCTC	1 cut(s)	1201
BsoBI	CYCGRG	1 cut(s)	1999
Bsp120I	GGGCCC	1 cut(s)	224
Bsp1286I	GDGCHC	4 cut(s)	228, 931, 1237, 1432
Bsp1720I	GCTNAGC	2 cut(s)	890, 1644
Bsp19I	CCATGG	2 cut(s)	457, 951
Bsp68I	TCGCGA	1 cut(s)	31
BspACI	CCGC	5 cut(s)	566, 832, 834, 1586, 1629
BspANI	GGCC	7 cut(s)	226, 443, 719, 1117, 1303, 1980, 2386
BspCNI	CTCAG	6 cut(s)	25, 343, 694, 855, 1240, 2236
BspDI	ATCGAT	1 cut(s)	132
BspFNI	CGCG	2 cut(s)	31, 834
BspHI	TCATGA	1 cut(s)	2260
BspLI	GGNNCC	4 cut(s)	226, 435, 502, 982
BspPI	GGATC	1 cut(s)	973
BspQI	GCTCTTC	1 cut(s)	1824
BspT107I	GGYRCC	1 cut(s)	500
BspTI	CTTAAG	1 cut(s)	850
BspTNI	GGTCTC	1 cut(s)	1201
BsrDI	GCAATG	1 cut(s)	1166
BsrFI	RCCGGY	1 cut(s)	63
BsrI	ACTGG	9 cut(s)	228, 444, 502, 526, 585, 786, 903, 932, 1701
BssAI	RCCGGY	1 cut(s)	63
BssECI	CCNNGG	4 cut(s)	457, 832, 951, 2377
BssT1I	CCWWGG	2 cut(s)	457, 951
Bst2UI	CCWGG	1 cut(s)	2379
Bst6I	CTCTTC	2 cut(s)	1821, 1824
BstAFI	CTTAAG	1 cut(s)	850
BstAPI	GCANNNNNTGC	2 cut(s)	1241, 1849
BstBAI	YACGTR	1 cut(s)	1445
BstC8I	GCNNGC	2 cut(s)	65, 568
BstDSI	CCRYGG	3 cut(s)	457, 832, 951
BstF5I	GGATG	9 cut(s)	194, 655, 828, 1043, 1198, 1293, 1655, 2150, 2363
BstFNI	CGCG	2 cut(s)	31, 834
BstH2I	RGCGCY	1 cut(s)	64
BstHHI	GCGC	1 cut(s)	63
BstMAI	GTCTC	2 cut(s)	1201, 2205
BstMWI	GCNNNNNNNGC	9 cut(s)	110, 1241, 1436, 1445, 1720, 1849, 2182, 2318, 2392
BstNI	CCWGG	1 cut(s)	2379
BstNSI	RCATGY	2 cut(s)	185, 392
BstPAI	GACNNNNGTC	1 cut(s)	1696
BstSCI	CCNGG	1 cut(s)	2377
BstSFI	CTRYAG	2 cut(s)	707, 1929
BstSLI	GKGCMC	3 cut(s)	228, 931, 1237
BstUI	CGCG	2 cut(s)	31, 834
BstV1I	GCAGC	3 cut(s)	906, 1453, 2001
BstV2I	GAAGAC	4 cut(s)	750, 777, 1257, 1962
BstX2I	RGATCY	5 cut(s)	40, 965, 1034, 1396, 1936
BstYI	RGATCY	5 cut(s)	40, 965, 1034, 1396, 1936
Bsu15I	ATCGAT	1 cut(s)	132
Bsu36I	CCTNAGG	2 cut(s)	505, 1975
BsuRI	GGCC	7 cut(s)	226, 443, 719, 1117, 1303, 1980, 2386
BsuTUI	ATCGAT	1 cut(s)	132
BtgI	CCRYGG	3 cut(s)	457, 832, 951
BtsCI	GGATG	9 cut(s)	194, 655, 828, 1043, 1198, 1293, 1655, 2150, 2363
BtsIMutI	CAGTG	5 cut(s)	437, 741, 752, 1086, 1708
BtuMI	TCGCGA	1 cut(s)	31
Cac8I	GCNNGC	2 cut(s)	65, 568
CaiI	CAGNNNCTG	2 cut(s)	740, 1088
CciI	TCATGA	1 cut(s)	2260
CfoI	GCGC	1 cut(s)	63
Cfr10I	RCCGGY	1 cut(s)	63
Cfr13I	GGNCC	7 cut(s)	224, 225, 434, 746, 1291, 1698, 2384
Cfr42I	CCGCGG	1 cut(s)	835
ClaI	ATCGAT	1 cut(s)	132
CseI	GACGC	1 cut(s)	1967
Csp6I	GTAC	8 cut(s)	17, 185, 213, 380, 1756, 1899, 2097, 2305
CspCI	CAANNNNNGTGG	2 cut(s)	2275, 2310
CviQI	GTAC	8 cut(s)	17, 185, 213, 380, 1756, 1899, 2097, 2305
DraI	TTTAAA	1 cut(s)	1218
EaeI	YGGCCR	1 cut(s)	441
Eam1104I	CTCTTC	2 cut(s)	1821, 1824
EarI	CTCTTC	2 cut(s)	1821, 1824
Eco130I	CCWWGG	2 cut(s)	457, 951
Eco147I	AGGCCT	1 cut(s)	719
Eco24I	GRGCYC	1 cut(s)	228
Eco31I	GGTCTC	1 cut(s)	1201
Eco47I	GGWCC	4 cut(s)	434, 746, 1291, 1698
Eco57I	CTGAAG	4 cut(s)	162, 834, 1065, 1805
Eco72I	CACGTG	1 cut(s)	1445
Eco81I	CCTNAGG	2 cut(s)	505, 1975
Eco88I	CYCGRG	1 cut(s)	1999
EcoRII	CCWGG	1 cut(s)	2377
EcoT14I	CCWWGG	2 cut(s)	457, 951
EcoT22I	ATGCAT	3 cut(s)	364, 997, 1246
EcoT38I	GRGCYC	1 cut(s)	228
ErhI	CCWWGG	2 cut(s)	457, 951
FalI	AAGNNNNNCTT	2 cut(s)	873, 905
FaqI	GGGAC	4 cut(s)	447, 475, 526, 774
FauI	CCCGC	1 cut(s)	559
FauNDI	CATATG	1 cut(s)	2317
FbaI	TGATCA	2 cut(s)	394, 1519
FblI	GTMKAC	1 cut(s)	1922
Fnu4HI	GCNGC	4 cut(s)	895, 1467, 1629, 2015
FokI	GGATG	9 cut(s)	181, 642, 815, 1030, 1205, 1300, 1642, 2137, 2370
FriOI	GRGCYC	1 cut(s)	228
Fsp4HI	GCNGC	4 cut(s)	895, 1467, 1629, 2015
GlaI	GCGC	1 cut(s)	62
GluI	GCNGC	4 cut(s)	895, 1467, 1629, 2015
GsaI	CCCAGC	1 cut(s)	795
GsuI	CTGGAG	5 cut(s)	89, 390, 568, 1736, 2400
HaeII	RGCGCY	1 cut(s)	64
HaeIII	GGCC	7 cut(s)	226, 443, 719, 1117, 1303, 1980, 2386
HapII	CCGG	2 cut(s)	54, 64
HgaI	GACGC	1 cut(s)	1967
HhaI	GCGC	1 cut(s)	63
Hin6I	GCGC	1 cut(s)	61
HinP1I	GCGC	1 cut(s)	61
HincII	GTYRAC	2 cut(s)	1806, 2034
HindII	GTYRAC	2 cut(s)	1806, 2034
HindIII	AAGCTT	4 cut(s)	309, 887, 2369, 2408
HinfI	GANTC	9 cut(s)	641, 857, 947, 971, 1025, 1055, 1457, 2056, 2156
HpaII	CCGG	2 cut(s)	54, 64
HphI	GGTGA	3 cut(s)	108, 2003, 2342
Hpy166II	GTNNAC	6 cut(s)	929, 1235, 1806, 1923, 2034, 2099
Hpy8I	GTNNAC	6 cut(s)	929, 1235, 1806, 1923, 2034, 2099
Hpy99I	CGWCG	1 cut(s)	1756
HpyAV	CCTTC	8 cut(s)	103, 351, 591, 875, 1057, 1263, 1675, 2321
HpyCH4IV	ACGT	3 cut(s)	941, 1444, 1639
HpyF10VI	GCNNNNNNNGC	9 cut(s)	110, 1241, 1436, 1445, 1720, 1849, 2182, 2318, 2392
HpySE526I	ACGT	3 cut(s)	941, 1444, 1639
HspAI	GCGC	1 cut(s)	61
KroI	GCCGGC	1 cut(s)	63
KroNI	GCCGGC	1 cut(s)	65
Ksp22I	TGATCA	2 cut(s)	394, 1519
KspI	CCGCGG	1 cut(s)	835
LguI	GCTCTTC	1 cut(s)	1824
LmnI	GCTCC	3 cut(s)	541, 2182, 2317
Lsp1109I	GCAGC	3 cut(s)	906, 1453, 2001
LweI	GCATC	8 cut(s)	124, 1004, 1253, 1573, 1664, 1984, 2064, 2159
MaeII	ACGT	3 cut(s)	941, 1444, 1639
MaeIII	GTNAC	3 cut(s)	190, 578, 1009
MfeI	CAATTG	1 cut(s)	1724
MflI	RGATCY	5 cut(s)	40, 965, 1034, 1396, 1936
MhlI	GDGCHC	4 cut(s)	228, 931, 1237, 1432
MluCI	AATT	9 cut(s)	605, 872, 1153, 1340, 1474, 1724, 2103, 2132, 2195
MlyI	GAGTC	2 cut(s)	1466, 2165
MmeI	TCCRAC	1 cut(s)	1152
Mph1103I	ATGCAT	3 cut(s)	364, 997, 1246
MroNI	GCCGGC	1 cut(s)	63
MroXI	GAANNNNTTC	1 cut(s)	2372
MseI	TTAA	8 cut(s)	357, 447, 635, 851, 1062, 1217, 1688, 1905
MslI	CAYNNNNRTG	2 cut(s)	387, 2164
MspA1I	CMGCKG	3 cut(s)	834, 1570, 1631
MspCI	CTTAAG	1 cut(s)	850
MspI	CCGG	2 cut(s)	54, 64
MspR9I	CCNGG	1 cut(s)	2379
MunI	CAATTG	1 cut(s)	1724
MvaI	CCWGG	1 cut(s)	2379
MvnI	CGCG	2 cut(s)	31, 834
MwoI	GCNNNNNNNGC	9 cut(s)	110, 1241, 1436, 1445, 1720, 1849, 2182, 2318, 2392
NaeI	GCCGGC	1 cut(s)	65
NcoI	CCATGG	2 cut(s)	457, 951
NdeI	CATATG	1 cut(s)	2317
NgoMIV	GCCGGC	1 cut(s)	63
NlaIV	GGNNCC	4 cut(s)	226, 435, 502, 982
NmuCI	GTSAC	1 cut(s)	578
NruI	TCGCGA	1 cut(s)	31
NsiI	ATGCAT	3 cut(s)	364, 997, 1246
NspI	RCATGY	2 cut(s)	185, 392
PaeR7I	CTCGAG	1 cut(s)	1999
PagI	TCATGA	1 cut(s)	2260
PceI	AGGCCT	1 cut(s)	719
PciI	ACATGT	1 cut(s)	181
PciSI	GCTCTTC	1 cut(s)	1824
PcsI	WCGNNNNNNNCGW	1 cut(s)	1036
PdiI	GCCGGC	1 cut(s)	65
PdmI	GAANNNNTTC	1 cut(s)	2372
PfeI	GAWTC	7 cut(s)	641, 857, 947, 971, 1025, 1055, 2056
PflMI	CCANNNNNTGG	2 cut(s)	1573, 2254
PkrI	GCNGC	4 cut(s)	896, 1468, 1630, 2016
PleI	GAGTC	2 cut(s)	1465, 2164
PmaCI	CACGTG	1 cut(s)	1445
PmlI	CACGTG	1 cut(s)	1445
PpsI	GAGTC	2 cut(s)	1465, 2164
Ppu21I	YACGTR	1 cut(s)	1445
PscI	ACATGT	1 cut(s)	181
PshAI	GACNNNNGTC	1 cut(s)	1696
PsiI	TTATAA	2 cut(s)	870, 1497
Psp6I	CCWGG	1 cut(s)	2377
PspCI	CACGTG	1 cut(s)	1445
PspFI	CCCAGC	1 cut(s)	791
PspGI	CCWGG	1 cut(s)	2377
PspN4I	GGNNCC	4 cut(s)	226, 435, 502, 982
PspOMI	GGGCCC	1 cut(s)	224
PspPI	GGNCC	7 cut(s)	224, 225, 434, 746, 1291, 1698, 2384
PspXI	VCTCGAGB	1 cut(s)	1999
PstNI	CAGNNNCTG	2 cut(s)	740, 1088
PsuI	RGATCY	5 cut(s)	40, 965, 1034, 1396, 1936
PvuII	CAGCTG	1 cut(s)	1570
RruI	TCGCGA	1 cut(s)	31
RsaI	GTAC	8 cut(s)	18, 186, 214, 381, 1757, 1900, 2098, 2306
RsaNI	GTAC	8 cut(s)	17, 185, 213, 380, 1756, 1899, 2097, 2305
RseI	CAYNNNNRTG	2 cut(s)	387, 2164
SacII	CCGCGG	1 cut(s)	835
SapI	GCTCTTC	1 cut(s)	1824
SaqAI	TTAA	8 cut(s)	357, 447, 635, 851, 1062, 1217, 1688, 1905
SatI	GCNGC	4 cut(s)	895, 1467, 1629, 2015
Sau96I	GGNCC	7 cut(s)	224, 225, 434, 746, 1291, 1698, 2384
ScaI	AGTACT	1 cut(s)	1900
SchI	GAGTC	2 cut(s)	1466, 2165
ScrFI	CCNGG	1 cut(s)	2379
SduI	GDGCHC	4 cut(s)	228, 931, 1237, 1432
SfaNI	GCATC	8 cut(s)	124, 1004, 1253, 1573, 1664, 1984, 2064, 2159
SfcI	CTRYAG	2 cut(s)	707, 1929
Sfr274I	CTCGAG	1 cut(s)	1999
Sfr303I	CCGCGG	1 cut(s)	835
SgrBI	CCGCGG	1 cut(s)	835
SinI	GGWCC	4 cut(s)	434, 746, 1291, 1698
SlaI	CTCGAG	1 cut(s)	1999
SmiMI	CAYNNNNRTG	2 cut(s)	387, 2164
SmlI	CTYRAG	3 cut(s)	850, 1433, 1999
SmoI	CTYRAG	3 cut(s)	850, 1433, 1999
SpeI	ACTAGT	1 cut(s)	2402
Sse9I	AATT	9 cut(s)	605, 872, 1153, 1340, 1474, 1724, 2103, 2132, 2195
SseBI	AGGCCT	1 cut(s)	719
SsiI	CCGC	5 cut(s)	566, 832, 834, 1586, 1629
StuI	AGGCCT	1 cut(s)	719
StyD4I	CCNGG	1 cut(s)	2377
StyI	CCWWGG	2 cut(s)	457, 951
TaiI	ACGT	3 cut(s)	944, 1447, 1642
TaqI	TCGA	2 cut(s)	132, 2000
TaqII	GACCGA	1 cut(s)	114
TasI	AATT	9 cut(s)	605, 872, 1153, 1340, 1474, 1724, 2103, 2132, 2195
TatI	WGTACW	3 cut(s)	379, 1898, 2096
TauI	GCSGC	1 cut(s)	1631
TfiI	GAWTC	7 cut(s)	641, 857, 947, 971, 1025, 1055, 2056
Tru1I	TTAA	8 cut(s)	357, 447, 635, 851, 1062, 1217, 1688, 1905
Tru9I	TTAA	8 cut(s)	357, 447, 635, 851, 1062, 1217, 1688, 1905
TscAI	CASTG	5 cut(s)	444, 741, 759, 1093, 1708
TseFI	GTSAC	1 cut(s)	578
TseI	GCWGC	3 cut(s)	894, 1466, 2014
Tsp45I	GTSAC	1 cut(s)	578
TspGWI	ACGGA	1 cut(s)	1870
TspRI	CASTG	5 cut(s)	444, 741, 759, 1093, 1708
Van91I	CCANNNNNTGG	2 cut(s)	1573, 2254
Vha464I	CTTAAG	1 cut(s)	850
VneI	GTGCAC	2 cut(s)	927, 1233
VpaK11BI	GGWCC	4 cut(s)	434, 746, 1291, 1698
XapI	RAATTY	5 cut(s)	605, 872, 1153, 1340, 1474
XbaI	TCTAGA	2 cut(s)	169, 974
XceI	RCATGY	2 cut(s)	185, 392
XcmI	CCANNNNNNNNNTGG	1 cut(s)	464
XhoI	CTCGAG	1 cut(s)	1999
XmiI	GTMKAC	1 cut(s)	1922
XmnI	GAANNNNTTC	1 cut(s)	2372
ZrmI	AGTACT	1 cut(s)	1900
Zsp2I	ATGCAT	3 cut(s)	364, 997, 1246

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.