Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0003761

Physical Location & Seq

Genomic Coordinates Reverse (-)

42753495 .. 42763323

Gene Structure 9829 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0350200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1998 bp

ATGGTGTTCAAATCGAAGATAAAATGGGTGGCTCTTTTTGTGCTGCTTTTATCCTTGGCATCGTTGCTTCGGCACCTCTCTATGGCCAAGTATCCGACTGTGGATTTAGTCCAGTATAGTGCATTGACCGCATTTCATAACGATTTCGATTCTTTATTAGGAACACAAAGACAGAGAATTCCCAATAGGAAGCTCTGGGCGGCTGTCAAGCCCTTGCAGTCTCTGCAGCCTTATGCCAACCCTCGAAGCAACTATCCTGCTCCAAATGAACACACCACTCGCTTTATTTACGCTAAAATATTCGGTGGATTTGCCAAGATAAGATCTTCGATCTGTGATCTGGTCACCATATCCAGGCTTCTAAATGCTACTCTTGTCATTCCAGAGATTCAAGAAAGCACTCGCTCAAAGGGCATCAGTACTCGTTTTAAGAGTTTCTCATATCTCTATGACGAGGAGCAATTTATTGCATCTCTCAAAAATGACATAATCGTTGTGAAGAGCCTGCCCGATAATCTCAAGGCTGCAAGGAAAAGGAATGAATTCAAAACTTTTAGACCCAAGAATTCAGCTTCTCCTAATTATTATATCAAAGAAGTCCTACCAACGCTGAAGAAATCCAAGGTTGTTGGCTTGATTCTTGCTGATGGTGGATGTCTGCAGTCAATCCTTCCGCCAAGCATGGCTGAGTTTCAAAGGCTTAGATGCAGGGTTGCGTTCCATTCACTCCAATTTAGGCAAGAAATTAAAATTCTTGGACAGCGGATGGTGGAGAGGTTACATGCATGGGGCCAACCTTTCCTAGCATTTAATCCTGGTTTATTGAGAGAAACCTTGGCATATCATGGTTGCGGTGAACTTTTTCAGGATGTTCACACTGAACTCATACAATATCGAAGGGCTCAAATGATTAAGCGGGGAGTTGTTAAGGAAGAACTAAGTGTAGATTCACACTTCCGCAGAGAAAATGGTTCTTGCCCGCTTATGCCTGAAGAGGTTGGTATTCTACTTCGTGCAATGGGATATCCTCCTAAAACAATCATATATCTGACTGGTTCTGAAACATTTGGGGGTCAACGTATTCTAGTTCCTCTGCGTGCCATGTTTGCCAACTTAGTAGATCGCACTTCTTTGTGCACAAATAAAGAACTCTCTGATTTACTAGGGCCTGAAACACCTCTTCCTCTTAATCCTTATCAACCACCTCCAGCAAAAAGTGTGGAGCAGCTTAAGGAAGAATGGAAGAGAGCCGGTCCTAGGCCTCGTCCTCTTCCTCCACCTCCAAGTAGACCTATCTATCAGCATGAAAAAGAAGGTTGGTATGGTTGGATTACTGAGAATGACACTGAACCAGAGCCTTCAAAGGTGGAGCTAAGGATGCAAGCACATAGACTACTTTGGGATGCTCTTGATTATATTGTTGCAGTGGAATCAGATGCATTCTTTCCTGGTTTTCACAATGATGGCAGTGGGTGGCCCGATTTTTCAAGCTTGGTCATGGGACACCGTTTATATGAGATTGCTTCTTCGAGAACATACCGACCAGACAGGAAAGTTGTAGCAGAACTTTTCAACATGACCAGGGACAATATGTACCACCACAAGCATAATTGGATACTCTCGGTACAGGAACATCTTAACAAAAGCTTGGGTGAGGAGGGCCTAATTAGGCAATCGCTTTTCTCGAAACCAACATCATTCATTTCACACCCACTCCCGGAATGCTCTTGTAGAATATCTTCTGCCGAGTCTTCAGTTCATTTAAAAGGTAATGATGGCCGAGTTGTATATGGAGGGGAAGAAGAGTGCCCCAAATGGATGCAGCAGCATGGTCAAGAAGTTCCAGCCCAGTCAACTGGGGAAGAAGTGGGTAAATCAGATGACAATGAATCATCAGACTATGGAAATATTGTGGTTGAAGAACCAGAATCAAATGACGACAGAACTAATGTGACTCTAGTTTTTGATCAGGATGATGAAATGGATCCAAATGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009889 GO:0009908 GO:0009965 GO:0009987 GO:0010016 GO:0010026 GO:0010090 GO:0010091 GO:0010154 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048316 GO:0048366 GO:0048367 GO:0048468 GO:0048518 GO:0048522 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051302 GO:0051781 GO:0060255 GO:0061458 GO:0065007 GO:0071840 GO:0080090 GO:0090558 GO:0090567 GO:0090626 GO:0090698 GO:0099402 GO:1903506 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

665

Amino Acids

75.77

Weight (kDa)

7.64

Isoelectric Point (pI)

50.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
O-FucT	PF10250	96 - 392	1.3e-58	GDP-fucose protein O-fucosyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003761)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23980
fragaria_vesca	FvH4_4g05311 FvH4_4g05311 FvH4_4g05311 FvH4_4g05311
malus_domestica	MD13G1227500.v1.1 MD16G1232700.v1.1
prunus_persica	Prupe.1G054700_v2.0.a1 Prupe.1G054700_v2.0.a1
pyrus_communis	pycom16g19470
rosa_chinensis	RchiOBHm_Chr4g0396341
rosa_laevigata	RLG00000009549
rosa_multiflora	Rmu_ssc0000234.1_g000016
rosa_roxburghii	Rroxscaffold_5G00341160 Rroxscaffold_7G00160200
rosa_rugosa	Rorug03G0349900 Rorug03G0350000 Rorug03G0350100 Rorug03G0350200 Rorug03G0350300
rosa_samantha	Rh1CG210400 Rh2BG187800 Rh3BG188400 Rh4BG066500 Rh4CG073300 Rh4DG063400 Rh5BG463000 Rh5CG484900 Rh6AG475600 Rh6BG312700 Rh6CG021900 Rh6DG022000 Rh7DG258100
rosa_wichuraiana	Rw4G005470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	72
AccI	GTMKAC	1 cut(s)	1288
AciI	CCGC	8 cut(s)	129, 200, 674, 763, 852, 916, 958, 980
AclWI	GGATC	2 cut(s)	1979, 1992
AcoI	YGGCCR	2 cut(s)	84, 1777
AcsI	RAATTY	4 cut(s)	177, 542, 565, 750
AcuI	CTGAAG	3 cut(s)	632, 1011, 1737
AfaI	GTAC	3 cut(s)	421, 1595, 1626
AfiI	CCNNNNNNNGG	4 cut(s)	82, 354, 1257, 1717
AflII	CTTAAG	1 cut(s)	1229
AgsI	TTSAA	8 cut(s)	10, 392, 547, 695, 1362, 1488, 1573, 1919
AjnI	CCWGG	4 cut(s)	353, 814, 1447, 1580
AluBI	AGCT	6 cut(s)	193, 572, 1228, 1372, 1491, 1647
AluI	AGCT	6 cut(s)	193, 572, 1228, 1372, 1491, 1647
Alw21I	GWGCWC	1 cut(s)	1139
Alw26I	GTCTC	1 cut(s)	225
Alw44I	GTGCAC	1 cut(s)	1135
AlwI	GGATC	2 cut(s)	1979, 1992
AlwNI	CAGNNNCTG	1 cut(s)	223
AoxI	GGCC	7 cut(s)	84, 790, 1166, 1259, 1475, 1660, 1777
ApaLI	GTGCAC	1 cut(s)	1135
ApeKI	GCWGC	6 cut(s)	43, 226, 524, 1225, 1822, 1825
ApoI	RAATTY	4 cut(s)	177, 542, 565, 750
Asp700I	GAANNNNTTC	3 cut(s)	542, 861, 1738
AspA2I	CCTAGG	1 cut(s)	1256
AspS9I	GGNCC	5 cut(s)	790, 1166, 1253, 1476, 1660
AsuC2I	CCSGG	1 cut(s)	1718
AsuHPI	GGTGA	3 cut(s)	337, 866, 1664
AvaII	GGWCC	1 cut(s)	1253
AvrII	CCTAGG	1 cut(s)	1256
BaeGI	GKGCMC	2 cut(s)	1139, 1811
BalI	TGGCCA	1 cut(s)	86
BamHI	GGATCC	1 cut(s)	1984
BanI	GGYRCC	1 cut(s)	72
BanII	GRGCYC	1 cut(s)	904
BarI	GAAGNNNNNNTAC	2 cut(s)	1723, 1755
BbsI	GAAGAC	1 cut(s)	1743
Bbv12I	GWGCWC	1 cut(s)	1139
BbvI	GCAGC	6 cut(s)	30, 238, 511, 1237, 1834, 1837
BccI	CCATC	4 cut(s)	641, 760, 1457, 1769
BciT130I	CCWGG	4 cut(s)	355, 816, 1449, 1582
BciVI	GTATCC	2 cut(s)	102, 1608
BclI	TGATCA	1 cut(s)	1966
BcnI	CCSGG	1 cut(s)	1718
BcoDI	GTCTC	1 cut(s)	225
BfaI	CTAG	5 cut(s)	803, 1085, 1163, 1257, 1958
BfmI	CTRYAG	2 cut(s)	224, 659
BfrI	CTTAAG	1 cut(s)	1229
BfuI	GTATCC	2 cut(s)	102, 1608
BglII	AGATCT	1 cut(s)	323
BisI	GCNGC	7 cut(s)	44, 201, 227, 525, 1226, 1823, 1826
BlnI	CCTAGG	1 cut(s)	1256
BlsI	GCNGC	7 cut(s)	45, 202, 228, 526, 1227, 1824, 1827
BmcAI	AGTACT	1 cut(s)	421
Bme1390I	CCNGG	5 cut(s)	355, 816, 1449, 1582, 1718
Bme18I	GGWCC	1 cut(s)	1253
BmgT120I	GGNCC	5 cut(s)	790, 1166, 1253, 1476, 1660
BmiI	GGNNCC	3 cut(s)	74, 791, 1986
BmrFI	CCNGG	5 cut(s)	355, 816, 1449, 1582, 1718
BmrI	ACTGGG	2 cut(s)	1843, 1866
BmsI	GCATC	8 cut(s)	68, 423, 479, 695, 1368, 1393, 1426, 1809
BmuI	ACTGGG	2 cut(s)	1843, 1866
BpiI	GAAGAC	1 cut(s)	1743
BpmI	CTGGAG	1 cut(s)	1191
Bpu10I	CCTNAGC	1 cut(s)	1373
BpuEI	CTTGAG	1 cut(s)	503
BpuMI	CCSGG	1 cut(s)	1718
BsaJI	CCNNGG	5 cut(s)	54, 621, 834, 1256, 1581
BsaXI	ACNNNNNCTCC	2 cut(s)	1698, 1728
Bsc4I	CCNNNNNNNGG	4 cut(s)	82, 354, 1257, 1717
Bse118I	RCCGGY	1 cut(s)	1250
Bse1I	ACTGG	4 cut(s)	112, 1057, 1849, 1861
Bse3DI	GCAATG	1 cut(s)	1023
BseBI	CCWGG	4 cut(s)	355, 816, 1449, 1582
BseDI	CCNNGG	5 cut(s)	54, 621, 834, 1256, 1581
BseGI	GGATG	7 cut(s)	659, 771, 874, 1383, 1408, 1824, 1978
BseLI	CCNNNNNNNGG	4 cut(s)	82, 354, 1257, 1717
BseMI	GCAATG	1 cut(s)	1023
BseMII	CTCAG	2 cut(s)	678, 1326
BseNI	ACTGG	4 cut(s)	112, 1057, 1849, 1861
BseRI	GAGGAG	2 cut(s)	470, 1670
BseSI	GKGCMC	2 cut(s)	1139, 1811
BseXI	GCAGC	6 cut(s)	30, 238, 511, 1237, 1834, 1837
BshFI	GGCC	7 cut(s)	86, 792, 1168, 1261, 1477, 1662, 1779
BshNI	GGYRCC	1 cut(s)	72
BsiHKAI	GWGCWC	1 cut(s)	1139
BsiSI	CCGG	2 cut(s)	1251, 1718
BslFI	GGGAC	2 cut(s)	1515, 1598
BslI	CCNNNNNNNGG	4 cut(s)	82, 354, 1257, 1717
BsmAI	GTCTC	1 cut(s)	225
BsmFI	GGGAC	2 cut(s)	1515, 1598
BsmI	GAATGC	2 cut(s)	1439, 1727
BsnI	GGCC	7 cut(s)	86, 792, 1168, 1261, 1477, 1662, 1779
Bsp1286I	GDGCHC	3 cut(s)	904, 1139, 1811
Bsp143I	GATC	6 cut(s)	323, 330, 337, 1120, 1966, 1984
BspACI	CCGC	8 cut(s)	129, 200, 674, 763, 852, 916, 958, 980
BspANI	GGCC	7 cut(s)	86, 792, 1168, 1261, 1477, 1662, 1779
BspCNI	CTCAG	2 cut(s)	679, 1327
BspLI	GGNNCC	3 cut(s)	74, 791, 1986
BspMAI	CTGCAG	2 cut(s)	228, 663
BspPI	GGATC	2 cut(s)	1979, 1992
BspQI	GCTCTTC	1 cut(s)	494
BspT107I	GGYRCC	1 cut(s)	72
BspTI	CTTAAG	1 cut(s)	1229
BsrDI	GCAATG	1 cut(s)	1023
BsrFI	RCCGGY	1 cut(s)	1250
BsrI	ACTGG	4 cut(s)	112, 1057, 1849, 1861
BssAI	RCCGGY	1 cut(s)	1250
BssECI	CCNNGG	5 cut(s)	54, 621, 834, 1256, 1581
BssMI	GATC	6 cut(s)	323, 330, 337, 1120, 1966, 1984
BssT1I	CCWWGG	4 cut(s)	54, 621, 834, 1256
Bst2UI	CCWGG	4 cut(s)	355, 816, 1449, 1582
Bst4CI	ACNGT	2 cut(s)	100, 1508
Bst6I	CTCTTC	6 cut(s)	494, 987, 1185, 1238, 1275, 1797
BstAFI	CTTAAG	1 cut(s)	1229
BstAPI	GCANNNNNTGC	1 cut(s)	223
BstC8I	GCNNGC	4 cut(s)	506, 980, 1098, 1383
BstDEI	CTNAG	6 cut(s)	687, 701, 938, 1114, 1335, 1373
BstEII	GGTNACC	1 cut(s)	343
BstF5I	GGATG	7 cut(s)	659, 771, 874, 1383, 1408, 1824, 1978
BstKTI	GATC	6 cut(s)	326, 333, 340, 1123, 1969, 1987
BstMAI	GTCTC	1 cut(s)	225
BstMBI	GATC	6 cut(s)	323, 330, 337, 1120, 1966, 1984
BstMWI	GCNNNNNNNGC	5 cut(s)	128, 223, 411, 1106, 1378
BstNI	CCWGG	4 cut(s)	355, 816, 1449, 1582
BstNSI	RCATGY	1 cut(s)	785
BstPI	GGTNACC	1 cut(s)	343
BstSCI	CCNGG	5 cut(s)	353, 814, 1447, 1580, 1716
BstSFI	CTRYAG	2 cut(s)	224, 659
BstSLI	GKGCMC	2 cut(s)	1139, 1811
BstV1I	GCAGC	6 cut(s)	30, 238, 511, 1237, 1834, 1837
BstV2I	GAAGAC	1 cut(s)	1743
BstX2I	RGATCY	2 cut(s)	323, 1984
BstXI	CCANNNNNNTGG	1 cut(s)	1856
BstYI	RGATCY	2 cut(s)	323, 1984
BsuI	GTATCC	2 cut(s)	102, 1608
BsuRI	GGCC	7 cut(s)	86, 792, 1168, 1261, 1477, 1662, 1779
BtsCI	GGATG	7 cut(s)	659, 771, 874, 1383, 1408, 1824, 1978
BtsI	GCAGTG	2 cut(s)	1431, 1474
BtsIMutI	CAGTG	4 cut(s)	876, 1344, 1431, 1474
Cac8I	GCNNGC	4 cut(s)	506, 980, 1098, 1383
CaiI	CAGNNNCTG	1 cut(s)	223
Cfr10I	RCCGGY	1 cut(s)	1250
Cfr13I	GGNCC	5 cut(s)	790, 1166, 1253, 1476, 1660
Csp6I	GTAC	3 cut(s)	420, 1594, 1625
CspCI	CAANNNNNGTGG	2 cut(s)	1200, 1235
CviAII	CATG	9 cut(s)	682, 782, 786, 845, 1102, 1304, 1498, 1576, 1829
CviQI	GTAC	3 cut(s)	420, 1594, 1625
DdeI	CTNAG	6 cut(s)	687, 701, 938, 1114, 1335, 1373
DpnI	GATC	6 cut(s)	325, 332, 339, 1122, 1968, 1986
DpnII	GATC	6 cut(s)	323, 330, 337, 1120, 1966, 1984
DraI	TTTAAA	1 cut(s)	1764
EaeI	YGGCCR	2 cut(s)	84, 1777
Eam1104I	CTCTTC	6 cut(s)	494, 987, 1185, 1238, 1275, 1797
EarI	CTCTTC	6 cut(s)	494, 987, 1185, 1238, 1275, 1797
EciI	GGCGGA	1 cut(s)	663
Eco130I	CCWWGG	4 cut(s)	54, 621, 834, 1256
Eco147I	AGGCCT	1 cut(s)	1261
Eco24I	GRGCYC	1 cut(s)	904
Eco32I	GATATC	1 cut(s)	1025
Eco47I	GGWCC	1 cut(s)	1253
Eco57I	CTGAAG	3 cut(s)	632, 1011, 1737
Eco91I	GGTNACC	1 cut(s)	343
EcoO109I	RGGNCCY	2 cut(s)	1166, 1660
EcoO65I	GGTNACC	1 cut(s)	343
EcoRI	GAATTC	3 cut(s)	177, 542, 565
EcoRII	CCWGG	4 cut(s)	353, 814, 1447, 1580
EcoRV	GATATC	1 cut(s)	1025
EcoT14I	CCWWGG	4 cut(s)	54, 621, 834, 1256
EcoT22I	ATGCAT	2 cut(s)	787, 1441
EcoT38I	GRGCYC	1 cut(s)	904
ErhI	CCWWGG	4 cut(s)	54, 621, 834, 1256
FaeI	CATG	9 cut(s)	685, 785, 789, 848, 1105, 1307, 1501, 1579, 1832
FaqI	GGGAC	2 cut(s)	1515, 1598
FatI	CATG	9 cut(s)	681, 781, 785, 844, 1101, 1303, 1497, 1575, 1828
FauI	CCCGC	2 cut(s)	909, 987
FbaI	TGATCA	1 cut(s)	1966
FblI	GTMKAC	1 cut(s)	1288
Fnu4HI	GCNGC	7 cut(s)	44, 201, 227, 525, 1226, 1823, 1826
FokI	GGATG	7 cut(s)	666, 778, 881, 1390, 1415, 1831, 1985
FriOI	GRGCYC	1 cut(s)	904
Fsp4HI	GCNGC	7 cut(s)	44, 201, 227, 525, 1226, 1823, 1826
FspBI	CTAG	5 cut(s)	803, 1085, 1163, 1257, 1958
GluI	GCNGC	7 cut(s)	44, 201, 227, 525, 1226, 1823, 1826
GsuI	CTGGAG	1 cut(s)	1191
HaeIII	GGCC	7 cut(s)	86, 792, 1168, 1261, 1477, 1662, 1779
HapII	CCGG	2 cut(s)	1251, 1718
Hin1II	CATG	9 cut(s)	685, 785, 789, 848, 1105, 1307, 1501, 1579, 1832
HincII	GTYRAC	2 cut(s)	1076, 1854
HindII	GTYRAC	2 cut(s)	1076, 1854
HindIII	AAGCTT	2 cut(s)	1489, 1645
HinfI	GANTC	9 cut(s)	149, 388, 637, 947, 1430, 1748, 1889, 1928, 1954
HpaII	CCGG	2 cut(s)	1251, 1718
HphI	GGTGA	3 cut(s)	337, 866, 1664
Hpy166II	GTNNAC	6 cut(s)	857, 874, 1076, 1137, 1289, 1854
Hpy188I	TCNGA	7 cut(s)	96, 1050, 1060, 1156, 1435, 1879, 1897
Hpy188III	TCNNGA	8 cut(s)	383, 392, 866, 1409, 1530, 1684, 1835, 1970
Hpy8I	GTNNAC	6 cut(s)	857, 874, 1076, 1137, 1289, 1854
HpyAV	CCTTC	4 cut(s)	680, 891, 1307, 1368
HpyCH4III	ACNGT	2 cut(s)	100, 1508
HpyCH4IV	ACGT	1 cut(s)	1078
HpyF10VI	GCNNNNNNNGC	5 cut(s)	128, 223, 411, 1106, 1378
HpyF3I	CTNAG	6 cut(s)	687, 701, 938, 1114, 1335, 1373
HpySE526I	ACGT	1 cut(s)	1078
Hsp92II	CATG	9 cut(s)	685, 785, 789, 848, 1105, 1307, 1501, 1579, 1832
Ksp22I	TGATCA	1 cut(s)	1966
Kzo9I	GATC	6 cut(s)	323, 330, 337, 1120, 1966, 1984
LguI	GCTCTTC	1 cut(s)	494
LmnI	GCTCC	4 cut(s)	265, 457, 1222, 1369
Lsp1109I	GCAGC	6 cut(s)	30, 238, 511, 1237, 1834, 1837
LweI	GCATC	8 cut(s)	68, 423, 479, 695, 1368, 1393, 1426, 1809
MaeI	CTAG	5 cut(s)	803, 1085, 1163, 1257, 1958
MaeII	ACGT	1 cut(s)	1078
MaeIII	GTNAC	3 cut(s)	343, 777, 1951
MalI	GATC	6 cut(s)	325, 332, 339, 1122, 1968, 1986
MboI	GATC	6 cut(s)	323, 330, 337, 1120, 1966, 1984
MflI	RGATCY	2 cut(s)	323, 1984
MhlI	GDGCHC	3 cut(s)	904, 1139, 1811
MlsI	TGGCCA	1 cut(s)	86
MluNI	TGGCCA	1 cut(s)	86
MlyI	GAGTC	2 cut(s)	1757, 1948
MmeI	TCCRAC	2 cut(s)	119, 1307
Mox20I	TGGCCA	1 cut(s)	86
Mph1103I	ATGCAT	2 cut(s)	787, 1441
MroXI	GAANNNNTTC	3 cut(s)	542, 861, 1738
MscI	TGGCCA	1 cut(s)	86
MseI	TTAA	9 cut(s)	429, 747, 810, 912, 927, 1188, 1230, 1638, 1763
MslI	CAYNNNNRTG	1 cut(s)	1461
Msp20I	TGGCCA	1 cut(s)	86
MspA1I	CMGCKG	1 cut(s)	763
MspCI	CTTAAG	1 cut(s)	1229
MspI	CCGG	2 cut(s)	1251, 1718
MspR9I	CCNGG	5 cut(s)	355, 816, 1449, 1582, 1718
Mva1269I	GAATGC	2 cut(s)	1439, 1727
MvaI	CCWGG	4 cut(s)	355, 816, 1449, 1582
MwoI	GCNNNNNNNGC	5 cut(s)	128, 223, 411, 1106, 1378
NciI	CCSGG	1 cut(s)	1718
NdeII	GATC	6 cut(s)	323, 330, 337, 1120, 1966, 1984
NlaIII	CATG	9 cut(s)	685, 785, 789, 848, 1105, 1307, 1501, 1579, 1832
NlaIV	GGNNCC	3 cut(s)	74, 791, 1986
NmeAIII	GCCGAG	2 cut(s)	1771, 1805
NmuCI	GTSAC	2 cut(s)	343, 1951
NsiI	ATGCAT	2 cut(s)	787, 1441
NspI	RCATGY	1 cut(s)	785
PceI	AGGCCT	1 cut(s)	1261
PciSI	GCTCTTC	1 cut(s)	494
PcsI	WCGNNNNNNNCGW	1 cut(s)	1682
PctI	GAATGC	2 cut(s)	1439, 1727
PdmI	GAANNNNTTC	3 cut(s)	542, 861, 1738
PfeI	GAWTC	7 cut(s)	149, 388, 637, 947, 1430, 1889, 1928
PfoI	TCCNGGA	1 cut(s)	1716
PkrI	GCNGC	7 cut(s)	45, 202, 228, 526, 1227, 1824, 1827
PleI	GAGTC	2 cut(s)	1756, 1948
PpsI	GAGTC	2 cut(s)	1756, 1948
Psp6I	CCWGG	4 cut(s)	353, 814, 1447, 1580
PspEI	GGTNACC	1 cut(s)	343
PspGI	CCWGG	4 cut(s)	353, 814, 1447, 1580
PspN4I	GGNNCC	3 cut(s)	74, 791, 1986
PspPI	GGNCC	5 cut(s)	790, 1166, 1253, 1476, 1660
PstI	CTGCAG	2 cut(s)	228, 663
PstNI	CAGNNNCTG	1 cut(s)	223
PsuI	RGATCY	2 cut(s)	323, 1984
RsaI	GTAC	3 cut(s)	421, 1595, 1626
RsaNI	GTAC	3 cut(s)	420, 1594, 1625
RseI	CAYNNNNRTG	1 cut(s)	1461
SapI	GCTCTTC	1 cut(s)	494
SaqAI	TTAA	9 cut(s)	429, 747, 810, 912, 927, 1188, 1230, 1638, 1763
SatI	GCNGC	7 cut(s)	44, 201, 227, 525, 1226, 1823, 1826
Sau3AI	GATC	6 cut(s)	323, 330, 337, 1120, 1966, 1984
Sau96I	GGNCC	5 cut(s)	790, 1166, 1253, 1476, 1660
ScaI	AGTACT	1 cut(s)	421
SchI	GAGTC	2 cut(s)	1757, 1948
ScrFI	CCNGG	5 cut(s)	355, 816, 1449, 1582, 1718
SduI	GDGCHC	3 cut(s)	904, 1139, 1811
SfaNI	GCATC	8 cut(s)	68, 423, 479, 695, 1368, 1393, 1426, 1809
SfcI	CTRYAG	2 cut(s)	224, 659
SinI	GGWCC	1 cut(s)	1253
SmiMI	CAYNNNNRTG	1 cut(s)	1461
SmlI	CTYRAG	2 cut(s)	518, 1229
SmoI	CTYRAG	2 cut(s)	518, 1229
SseBI	AGGCCT	1 cut(s)	1261
SsiI	CCGC	8 cut(s)	129, 200, 674, 763, 852, 916, 958, 980
SspI	AATATT	2 cut(s)	300, 1909
SspMI	CTAG	5 cut(s)	803, 1085, 1163, 1257, 1958
StuI	AGGCCT	1 cut(s)	1261
StyD4I	CCNGG	5 cut(s)	353, 814, 1447, 1580, 1716
StyI	CCWWGG	4 cut(s)	54, 621, 834, 1256
TaaI	ACNGT	2 cut(s)	100, 1508
TaiI	ACGT	1 cut(s)	1081
TaqI	TCGA	7 cut(s)	14, 147, 244, 329, 895, 1529, 1685
TatI	WGTACW	1 cut(s)	419
TauI	GCSGC	1 cut(s)	203
TfiI	GAWTC	7 cut(s)	149, 388, 637, 947, 1430, 1889, 1928
Tru1I	TTAA	9 cut(s)	429, 747, 810, 912, 927, 1188, 1230, 1638, 1763
Tru9I	TTAA	9 cut(s)	429, 747, 810, 912, 927, 1188, 1230, 1638, 1763
TscAI	CASTG	4 cut(s)	883, 1351, 1431, 1474
TseFI	GTSAC	2 cut(s)	343, 1951
TseI	GCWGC	6 cut(s)	43, 226, 524, 1225, 1822, 1825
Tsp45I	GTSAC	2 cut(s)	343, 1951
TspDTI	ATGAA	8 cut(s)	125, 282, 555, 1320, 1690, 1748, 1902, 1992
TspRI	CASTG	4 cut(s)	883, 1351, 1431, 1474
Vha464I	CTTAAG	1 cut(s)	1229
VneI	GTGCAC	1 cut(s)	1135
VpaK11BI	GGWCC	1 cut(s)	1253
XapI	RAATTY	4 cut(s)	177, 542, 565, 750
XceI	RCATGY	1 cut(s)	785
XmaJI	CCTAGG	1 cut(s)	1256
XmiI	GTMKAC	1 cut(s)	1288
XmnI	GAANNNNTTC	3 cut(s)	542, 861, 1738
XspI	CTAG	5 cut(s)	803, 1085, 1163, 1257, 1958
ZrmI	AGTACT	1 cut(s)	421
Zsp2I	ATGCAT	2 cut(s)	787, 1441

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.