Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0010808

Physical Location & Seq

Genomic Coordinates Forward (+)

4198643 .. 4201342

Gene Structure 2700 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2556 bp

ATGGTCGGCTCAATTCTGGTCATTGCTCATGGCCTGGCGTCTTCTGCAACTCAAATTCTCGGGTGGTTTCACTCAACATTACTGGGAATGGAGGAGAAACCGAAGGTAGATCGAAAACTATTGCGTGCTCAGATTTTGCTCAGTTGCCGCTTTATGGATTTGGAATCAGGAGGAGCTGTGAGGGGTGAAATTCCTAGTGAAGTTTTGGGCTTGGAAAATTTGGAGGTTCTTGATCTCGAGGGAAACTCGATAACTGGGTCGCTGCCCTTTCGGCTTAATCCAAATTTGAGGGTTCTTAATCTGGGGTTTAATAGGATTGAAGGTGAGATACCGACCTTGTGGTCAAATTATATGAGCCTAGAGATCTTGAATTTAGCTGGGAATCTCGTAAACGGGACAATTCCAGGTTTCATTGGTAGGTTAAAGGCGGTGTACTTGTCATACAATTCACTTAGTGGAGATGTTCCCAGCGAGATTGGAGCCAAGTGTGGGAAGCTTGAGCATCTTGATTTGGCGGGTAATTTCTTGGTTCATAAAATTCCAAGCAGTTTGGGAAATTGCAGCCAGTTGAGGACGTTGTTGCTGTATTCAAATATGTTTGAAGAGGGTATTCCAGCTGAACTCGGACGGCTTCAAGCTCTGGAAGTGTTGGATGTGTCAAGGAATAGCCTGAGTAGTTCATTACCACGCGAGCTGGGGAATTGTTCTCAGTTGTCTGCCCTTGTGCTGTCATCTATGTTTAATCCACTTCCACGAGTCAATGATACTGTAGTGGACTCTTTGCTGGAGCAGTTGAATGCTATGAGTGACGACTTCAATTACTTTCAAGGTACAATGCCTGTAGAAATTACAACCCTTCCGAAGCTAAGGATCTTGTGGGCACCAAGGGCAAGTATTGAGGGCACTTTCCCAAGCAATTGGGGTGGTTGTGAATACTTAGAGATGATCAATTTGGCTCAGAACTTTTTGACTGGGGAAATTCCTAGCGGACTTAGTCGCTGCAGGAACCTTCAATTTCTTGATGTGAGCTCTAACAGGCTTAGTGGGGAGCTTTTCCAGGATCTTCATGTTCCTTGTATGGATATGTTTGATATCAGCGGAAACATCTTGTCAGGTTCAATACCTGAATATTTCAACAAAACTTGTGGTTCTCCTTTGAGAGATTTTTCTTTCAAGTATGAGGATCCGTCCTCACACTATGTAGCATTTTTTGCTTCTAAATCCCAAGTTGGAAATCCATTGCAAATGCACAGAGAGGATGACGGTCTCATAGTAGTACACAACTTTGCGCACAATAATTTTACTGGCACTTTGCAGACACTGCCTATTGCACCTGAAAGACTTGGGAAGCAAACTTTTTATGCATTCTTTGCTGGAGAAAACAAGCTTTCTGGAGAATTTCCAGGTAACTTATTTGGCAAGTGTGAGGGATTGGAGTGGCTGATTGTTAATGTTAGCCACAACAAGTTAGAAGGTCAGATTCCTGCTGAAGTTGGCACTATGTGCAAATCTCTTAAAGTTTTAGATGCATCTCGGAATCAGATGATTGGTCCTATTCCCCCTACCATTGGGAACTTGTCTCTTGTCTCCCTTAATTTGAGTTGGAACATGTTGAAGGGTGAAATACCAACCAGTCTTGGCCAGATAACTGATCTGACGTATCTATCCTTATCAGGCAATCTCCTTACAGGTGTCATTCCATCTAGTTTGGGGCAGCTTTCCTCTTTAGAAGTGCTTGAACTATCTTCAAACTATCTCACTGGCGAGATACCAAAAGATCTTGTGAATCTGCGAAACCTGACTGTTCTTCTGCTGGACAAGAATAATATTTCTGGTCAGATTCCATCTGGATTGGCAAATATGGCCACACTGTCATCTTTCAATGTGTCTTTCAATAACATATCAGGTTCACTGCCTGCAAATAATAACCTGATGAAATGCAATGCTGCTATTGGAAACCCAAATCTACAATCTTGCCCCATGTTGTCTCAGACACAGCCAGCTTTGGATTCCCAAGGAAGAGTTGGCGATTCACAACCTCTTGCTGCTTCACCAGTGGGAGGTCCAGCTCTGAAGAGTGGGAACGGTTTCAGTCCGATTGAGATAGCATCCATTACATCTGCATCGGCCATAGTTTCAGTGCTGCTTGCTCTTGTTGTTCTGTTCTTGTACACACGGAAATGGAACCCAAAGTCTGGAACACAAGTGTCTACCCGGAAGGAAGTTACAGTTTTCACAAACATTGGGGTTCCGTTGACCTTTGAGAATGTTGTGCGAGGCACAGGAAGTTTCAATGCTAGCAACTGCATCGGGAATGGAGGTTTTGGAGCTACCTACAAGGCAGAGATATCACCTGGAATCGTGGTGGCAATTAAACGGCTTTCAGTTGGAAGGTTCCAAGGAGTTCAACAGTTTCATGCAGAAATTAAAACCCTTGGAAGGCTTCGCCATCCAAATCTTGTCACTTTGCTTGGTTATCACGCCAGTGATACAGAGATGTTTCTAATATATAACTATTTGGCGGGTGGGTACTTCACAAGATTGCTTTGGACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000578 GO:0001101 GO:0003002 GO:0003006 GO:0005575 GO:0005623 GO:0005886 GO:0006725 GO:0006950 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009555 GO:0009628 GO:0009698 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009808 GO:0009846 GO:0009856 GO:0009880 GO:0009888 GO:0009908 GO:0009942 GO:0009945 GO:0009956 GO:0009987 GO:0010035 GO:0010073 GO:0010152 GO:0010154 GO:0016020 GO:0016043 GO:0019748 GO:0021700 GO:0022414 GO:0022607 GO:0032501 GO:0032502 GO:0042221 GO:0043933 GO:0044085 GO:0044237 GO:0044464 GO:0044706 GO:0048229 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048508 GO:0048608 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0051259 GO:0051260 GO:0051704 GO:0061458 GO:0065003 GO:0071704 GO:0071840 GO:0071944 GO:0090567 GO:0099402 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase

Protein Analysis

852

Amino Acids

92.27

Weight (kDa)

5.81

Isoelectric Point (pI)

37.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_4	PF12799	73 - 107	4.2e-06	Leucine Rich repeats (2 copies)
LRR_14	PF23598	115 - 268	1.3e-08	Leucine-rich repeat region
LRR_14	PF23598	544 - 627	1.2e-08	Leucine-rich repeat region
LRR_8	PF13855	552 - 610	2.6e-09	Leucine rich repeat
Pkinase	PF00069	766 - 849	3.9e-09	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	767 - 848	2e-08	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0010808)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02130 AT3G02130
fragaria_vesca	FvH4_6g46830
malus_domestica	MD09G1067100.v1.1 MD17G1060000.v1.1 MD17G1060100.v1.1
prunus_persica	Prupe.3G254600_v2.0.a1
pyrus_communis	pycom111g05640 pycom17g05970 pycom17g05980
rosa_chinensis	RchiOBHm_Chr2g0165821
rosa_laevigata	RLG00000021558
rosa_multiflora	Rmu_sc0003227.1_g000004
rosa_roxburghii	Rroxscaffold_2G00085480
rosa_rugosa	Rorug02G0518000
rosa_samantha	Rh2AG583700 Rh2BG595700 Rh2CG566600 Rh2DG605500
rosa_wichuraiana	Rw2G048670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	340
Acc16I	TGCGCA	1 cut(s)	1290
AccB1I	GGYRCC	1 cut(s)	880
AccB7I	CCANNNNNTGG	1 cut(s)	2195
AccI	GTMKAC	1 cut(s)	2210
AccII	CGCG	1 cut(s)	690
AciI	CCGC	6 cut(s)	148, 428, 515, 987, 1098, 2522
AclWI	GGATC	4 cut(s)	878, 1068, 1178, 1191
AcoI	YGGCCR	3 cut(s)	1639, 1863, 2127
AcsI	RAATTY	8 cut(s)	54, 189, 217, 283, 370, 537, 978, 1397
AcuI	CTGAAG	2 cut(s)	1509, 2093
AcyI	GRCGYC	1 cut(s)	38
AdeI	CACNNNGTG	2 cut(s)	455, 1503
AfaI	GTAC	5 cut(s)	434, 832, 1278, 2171, 2531
AfiI	CCNNNNNNNGG	6 cut(s)	154, 489, 1568, 2060, 2195, 2439
AflIII	ACRYGT	1 cut(s)	1608
AjnI	CCWGG	5 cut(s)	33, 403, 1056, 1402, 2353
AleI	CACNNNNGTG	1 cut(s)	2484
Alw21I	GWGCWC	2 cut(s)	130, 1031
Alw26I	GTCTC	4 cut(s)	1271, 1584, 1591, 1992
AlwI	GGATC	4 cut(s)	878, 1068, 1178, 1191
AlwNI	CAGNNNCTG	1 cut(s)	1321
Ama87I	CYCGRG	2 cut(s)	59, 236
AoxI	GGCC	4 cut(s)	31, 1639, 1863, 2127
ApeKI	GCWGC	7 cut(s)	262, 561, 999, 1714, 1946, 2045, 2143
ApoI	RAATTY	8 cut(s)	54, 189, 217, 283, 370, 537, 978, 1397
Asp700I	GAANNNNTTC	1 cut(s)	2087
AspLEI	GCGC	1 cut(s)	1291
AspS9I	GGNCC	2 cut(s)	1550, 2063
AsuC2I	CCSGG	1 cut(s)	2215
AsuHPI	GGTGA	5 cut(s)	197, 335, 1631, 2043, 2343
AsuNHI	GCTAGC	1 cut(s)	2297
AvaI	CYCGRG	2 cut(s)	59, 236
AvaII	GGWCC	2 cut(s)	1550, 2063
BaeGI	GKGCMC	2 cut(s)	883, 905
BaeI	ACNNNNGTAYC	2 cut(s)	756, 789
BalI	TGGCCA	2 cut(s)	1641, 1865
BamHI	GGATCC	1 cut(s)	1183
BanI	GGYRCC	1 cut(s)	880
BanII	GRGCYC	1 cut(s)	1031
BarI	GAAGNNNNNNTAC	2 cut(s)	312, 344
BauI	CACGAG	1 cut(s)	753
BbsI	GAAGAC	1 cut(s)	33
Bbv12I	GWGCWC	2 cut(s)	130, 1031
BbvI	GCAGC	7 cut(s)	249, 573, 986, 1726, 1933, 2032, 2130
BccI	CCATC	3 cut(s)	1708, 1852, 2457
BceAI	ACGGC	2 cut(s)	644, 2393
BcgI	CGANNNNNNTGC	2 cut(s)	2290, 2324
BciT130I	CCWGG	5 cut(s)	35, 405, 1058, 1404, 2355
BclI	TGATCA	1 cut(s)	945
BcnI	CCSGG	1 cut(s)	2215
BcoDI	GTCTC	4 cut(s)	1271, 1584, 1591, 1992
BfaI	CTAG	5 cut(s)	195, 359, 984, 1704, 2298
BfmI	CTRYAG	3 cut(s)	768, 840, 1000
BglI	GCCNNNNNGGC	1 cut(s)	271
BglII	AGATCT	2 cut(s)	363, 1777
BisI	GCNGC	8 cut(s)	148, 263, 562, 1000, 1715, 1947, 2046, 2144
BlsI	GCNGC	8 cut(s)	149, 264, 563, 1001, 1716, 1948, 2047, 2145
Bme1390I	CCNGG	6 cut(s)	35, 405, 1058, 1404, 2215, 2355
Bme18I	GGWCC	2 cut(s)	1550, 2063
BmeT110I	CYCGRG	2 cut(s)	59, 236
BmgT120I	GGNCC	2 cut(s)	1550, 2063
BmiI	GGNNCC	7 cut(s)	481, 882, 1007, 1185, 2186, 2250, 2396
BmrFI	CCNGG	6 cut(s)	35, 405, 1058, 1404, 2215, 2355
BmrI	ACTGGG	3 cut(s)	92, 264, 981
BmsI	GCATC	6 cut(s)	511, 1516, 1538, 2117, 2132, 2316
BmtI	GCTAGC	1 cut(s)	2301
BmuI	ACTGGG	3 cut(s)	92, 264, 981
BpiI	GAAGAC	1 cut(s)	33
BplI	GAGNNNNNCTC	2 cut(s)	230, 262
BpmI	CTGGAG	3 cut(s)	806, 1395, 1413
Bpu10I	CCTNAGC	1 cut(s)	866
BpuEI	CTTGAG	1 cut(s)	518
BpuMI	CCSGG	1 cut(s)	2215
BsaHI	GRCGYC	1 cut(s)	38
BsaI	GGTCTC	1 cut(s)	1271
BsaJI	CCNNGG	4 cut(s)	884, 2014, 2398, 2434
BsaXI	ACNNNNNCTCC	2 cut(s)	162, 192
Bsc4I	CCNNNNNNNGG	6 cut(s)	154, 489, 1568, 2060, 2195, 2439
Bse1I	ACTGG	9 cut(s)	87, 259, 565, 976, 1309, 1632, 1765, 2054, 2484
Bse3DI	GCAATG	3 cut(s)	21, 1238, 1948
BseBI	CCWGG	5 cut(s)	35, 405, 1058, 1404, 2355
BseDI	CCNNGG	4 cut(s)	884, 2014, 2398, 2434
BseGI	GGATG	4 cut(s)	658, 1264, 2108, 2449
BseLI	CCNNNNNNNGG	6 cut(s)	154, 489, 1568, 2060, 2195, 2439
BseMI	GCAATG	3 cut(s)	21, 1238, 1948
BseMII	CTCAG	6 cut(s)	143, 154, 662, 722, 971, 2003
BseNI	ACTGG	9 cut(s)	87, 259, 565, 976, 1309, 1632, 1765, 2054, 2484
BseRI	GAGGAG	2 cut(s)	107, 186
BseSI	GKGCMC	2 cut(s)	883, 905
BseXI	GCAGC	7 cut(s)	249, 573, 986, 1726, 1933, 2032, 2130
BseYI	CCCAGC	3 cut(s)	377, 467, 694
Bsh1236I	CGCG	1 cut(s)	690
BshFI	GGCC	4 cut(s)	33, 1641, 1865, 2129
BshNI	GGYRCC	1 cut(s)	880
BsiHKAI	GWGCWC	2 cut(s)	130, 1031
BsiHKCI	CYCGRG	2 cut(s)	59, 236
BsiSI	CCGG	1 cut(s)	2215
BslFI	GGGAC	1 cut(s)	409
BslI	CCNNNNNNNGG	6 cut(s)	154, 489, 1568, 2060, 2195, 2439
BsmAI	GTCTC	4 cut(s)	1271, 1584, 1591, 1992
BsmFI	GGGAC	1 cut(s)	409
BsmI	GAATGC	2 cut(s)	802, 1364
BsnI	GGCC	4 cut(s)	33, 1641, 1865, 2129
Bso31I	GGTCTC	1 cut(s)	1271
BsoBI	CYCGRG	2 cut(s)	59, 236
Bsp1286I	GDGCHC	4 cut(s)	130, 883, 905, 1031
Bsp1407I	TGTACA	1 cut(s)	2169
Bsp143I	GATC	9 cut(s)	109, 232, 363, 870, 945, 1060, 1183, 1651, 1777
BspACI	CCGC	6 cut(s)	148, 428, 515, 987, 1098, 2522
BspANI	GGCC	4 cut(s)	33, 1641, 1865, 2129
BspCNI	CTCAG	6 cut(s)	142, 153, 663, 721, 970, 2002
BspFNI	CGCG	1 cut(s)	690
BspLI	GGNNCC	7 cut(s)	481, 882, 1007, 1185, 2186, 2250, 2396
BspMAI	CTGCAG	1 cut(s)	1004
BspOI	GCTAGC	1 cut(s)	2301
BspPI	GGATC	4 cut(s)	878, 1068, 1178, 1191
BspT107I	GGYRCC	1 cut(s)	880
BspTNI	GGTCTC	1 cut(s)	1271
BsrDI	GCAATG	3 cut(s)	21, 1238, 1948
BsrGI	TGTACA	1 cut(s)	2169
BsrI	ACTGG	9 cut(s)	87, 259, 565, 976, 1309, 1632, 1765, 2054, 2484
BssECI	CCNNGG	4 cut(s)	884, 2014, 2398, 2434
BssMI	GATC	9 cut(s)	109, 232, 363, 870, 945, 1060, 1183, 1651, 1777
BssNI	GRCGYC	1 cut(s)	38
BssSI	CACGAG	1 cut(s)	753
BssT1I	CCWWGG	4 cut(s)	884, 2014, 2398, 2434
Bst2BI	CACGAG	1 cut(s)	753
Bst2UI	CCWGG	5 cut(s)	35, 405, 1058, 1404, 2355
Bst4CI	ACNGT	7 cut(s)	769, 1265, 1804, 1872, 2087, 2230, 2412
Bst6I	CTCTTC	3 cut(s)	597, 2014, 2069
BstACI	GRCGYC	1 cut(s)	38
BstAPI	GCANNNNNTGC	4 cut(s)	1211, 1321, 1370, 1503
BstAUI	TGTACA	1 cut(s)	2169
BstC8I	GCNNGC	6 cut(s)	126, 692, 1917, 2001, 2148, 2299
BstF5I	GGATG	4 cut(s)	658, 1264, 2108, 2449
BstFNI	CGCG	1 cut(s)	690
BstHHI	GCGC	1 cut(s)	1291
BstKTI	GATC	9 cut(s)	112, 235, 366, 873, 948, 1063, 1186, 1654, 1780
BstMAI	GTCTC	4 cut(s)	1271, 1584, 1591, 1992
BstMBI	GATC	9 cut(s)	109, 232, 363, 870, 945, 1060, 1183, 1651, 1777
BstMWI	GCNNNNNNNGC	8 cut(s)	44, 271, 887, 1211, 1321, 1370, 1503, 1862
BstNI	CCWGG	5 cut(s)	35, 405, 1058, 1404, 2355
BstNSI	RCATGY	1 cut(s)	1612
BstSCI	CCNGG	6 cut(s)	33, 403, 1056, 1402, 2213, 2353
BstSFI	CTRYAG	3 cut(s)	768, 840, 1000
BstSLI	GKGCMC	2 cut(s)	883, 905
BstUI	CGCG	1 cut(s)	690
BstV1I	GCAGC	7 cut(s)	249, 573, 986, 1726, 1933, 2032, 2130
BstV2I	GAAGAC	1 cut(s)	33
BstX2I	RGATCY	5 cut(s)	363, 870, 1060, 1183, 1777
BstXI	CCANNNNNNTGG	1 cut(s)	918
BstYI	RGATCY	5 cut(s)	363, 870, 1060, 1183, 1777
BsuRI	GGCC	4 cut(s)	33, 1641, 1865, 2129
BtsCI	GGATG	4 cut(s)	658, 1264, 2108, 2449
BtsI	GCAGTG	2 cut(s)	1319, 1910
BtsIMutI	CAGTG	7 cut(s)	1319, 1758, 1868, 1910, 2061, 2145, 2491
Cac8I	GCNNGC	6 cut(s)	126, 692, 1917, 2001, 2148, 2299
CaiI	CAGNNNCTG	1 cut(s)	1321
CfoI	GCGC	1 cut(s)	1291
Cfr13I	GGNCC	2 cut(s)	1550, 2063
CseI	GACGC	1 cut(s)	27
Csp6I	GTAC	5 cut(s)	433, 831, 1277, 2170, 2530
CspCI	CAANNNNNGTGG	4 cut(s)	904, 939, 1126, 1161
CviAII	CATG	5 cut(s)	29, 1067, 1609, 1981, 2417
CviQI	GTAC	5 cut(s)	433, 831, 1277, 2170, 2530
DpnI	GATC	9 cut(s)	111, 234, 365, 872, 947, 1062, 1185, 1653, 1779
DpnII	GATC	9 cut(s)	109, 232, 363, 870, 945, 1060, 1183, 1651, 1777
DraIII	CACNNNGTG	2 cut(s)	455, 1503
DrdI	GACNNNNNNGTC	1 cut(s)	340
DseDI	GACNNNNNNGTC	1 cut(s)	340
EaeI	YGGCCR	3 cut(s)	1639, 1863, 2127
Eam1104I	CTCTTC	3 cut(s)	597, 2014, 2069
EarI	CTCTTC	3 cut(s)	597, 2014, 2069
Ecl136II	GAGCTC	1 cut(s)	1029
Eco130I	CCWWGG	4 cut(s)	884, 2014, 2398, 2434
Eco24I	GRGCYC	1 cut(s)	1031
Eco31I	GGTCTC	1 cut(s)	1271
Eco32I	GATATC	2 cut(s)	1093, 2349
Eco47I	GGWCC	2 cut(s)	1550, 2063
Eco53kI	GAGCTC	1 cut(s)	1029
Eco57I	CTGAAG	2 cut(s)	1509, 2093
Eco88I	CYCGRG	2 cut(s)	59, 236
EcoICRI	GAGCTC	1 cut(s)	1029
EcoRII	CCWGG	5 cut(s)	33, 403, 1056, 1402, 2353
EcoRV	GATATC	2 cut(s)	1093, 2349
EcoT14I	CCWWGG	4 cut(s)	884, 2014, 2398, 2434
EcoT22I	ATGCAT	2 cut(s)	1366, 1531
EcoT38I	GRGCYC	1 cut(s)	1031
ErhI	CCWWGG	4 cut(s)	884, 2014, 2398, 2434
FaeI	CATG	5 cut(s)	32, 1070, 1612, 1984, 2420
FaqI	GGGAC	1 cut(s)	409
FatI	CATG	5 cut(s)	28, 1066, 1608, 1980, 2416
FauI	CCCGC	2 cut(s)	508, 2515
FbaI	TGATCA	1 cut(s)	945
FblI	GTMKAC	1 cut(s)	2210
Fnu4HI	GCNGC	8 cut(s)	148, 263, 562, 1000, 1715, 1947, 2046, 2144
FokI	GGATG	4 cut(s)	665, 1271, 2095, 2436
FriOI	GRGCYC	1 cut(s)	1031
Fsp4HI	GCNGC	8 cut(s)	148, 263, 562, 1000, 1715, 1947, 2046, 2144
FspBI	CTAG	5 cut(s)	195, 359, 984, 1704, 2298
FspI	TGCGCA	1 cut(s)	1290
GlaI	GCGC	1 cut(s)	1290
GluI	GCNGC	8 cut(s)	148, 263, 562, 1000, 1715, 1947, 2046, 2144
GsaI	CCCAGC	3 cut(s)	381, 471, 698
GsuI	CTGGAG	3 cut(s)	806, 1395, 1413
HaeIII	GGCC	4 cut(s)	33, 1641, 1865, 2129
HapII	CCGG	1 cut(s)	2215
HgaI	GACGC	1 cut(s)	27
HhaI	GCGC	1 cut(s)	1291
Hin1I	GRCGYC	1 cut(s)	38
Hin1II	CATG	5 cut(s)	32, 1070, 1612, 1984, 2420
Hin6I	GCGC	1 cut(s)	1289
HinP1I	GCGC	1 cut(s)	1289
HincII	GTYRAC	1 cut(s)	2256
HindII	GTYRAC	1 cut(s)	2256
HindIII	AAGCTT	2 cut(s)	494, 1385
HpaII	CCGG	1 cut(s)	2215
HphI	GGTGA	5 cut(s)	197, 335, 1631, 2043, 2343
Hpy166II	GTNNAC	8 cut(s)	391, 433, 775, 1279, 1910, 2172, 2211, 2256
Hpy8I	GTNNAC	8 cut(s)	391, 433, 775, 1279, 1910, 2172, 2211, 2256
HpyAV	CCTTC	9 cut(s)	97, 314, 866, 1019, 1466, 1609, 2212, 2385, 2433
HpyCH4III	ACNGT	7 cut(s)	769, 1265, 1804, 1872, 2087, 2230, 2412
HpyCH4IV	ACGT	2 cut(s)	575, 1658
HpyF10VI	GCNNNNNNNGC	8 cut(s)	44, 271, 887, 1211, 1321, 1370, 1503, 1862
HpySE526I	ACGT	2 cut(s)	575, 1658
Hsp92I	GRCGYC	1 cut(s)	38
Hsp92II	CATG	5 cut(s)	32, 1070, 1612, 1984, 2420
HspAI	GCGC	1 cut(s)	1289
Ksp22I	TGATCA	1 cut(s)	945
Kzo9I	GATC	9 cut(s)	109, 232, 363, 870, 945, 1060, 1183, 1651, 1777
LmnI	GCTCC	5 cut(s)	173, 479, 787, 1048, 2327
Lsp1109I	GCAGC	7 cut(s)	249, 573, 986, 1726, 1933, 2032, 2130
LweI	GCATC	6 cut(s)	511, 1516, 1538, 2117, 2132, 2316
MaeI	CTAG	5 cut(s)	195, 359, 984, 1704, 2298
MaeII	ACGT	2 cut(s)	575, 1658
MaeIII	GTNAC	4 cut(s)	806, 1406, 2224, 2461
MalI	GATC	9 cut(s)	111, 234, 365, 872, 947, 1062, 1185, 1653, 1779
MboI	GATC	9 cut(s)	109, 232, 363, 870, 945, 1060, 1183, 1651, 1777
MboII	GAAGA	7 cut(s)	33, 614, 1055, 1737, 1799, 2031, 2086
MfeI	CAATTG	1 cut(s)	916
MflI	RGATCY	5 cut(s)	363, 870, 1060, 1183, 1777
MhlI	GDGCHC	4 cut(s)	130, 883, 905, 1031
MlsI	TGGCCA	2 cut(s)	1641, 1865
MluNI	TGGCCA	2 cut(s)	1641, 1865
MlyI	GAGTC	2 cut(s)	765, 770
MmeI	TCCRAC	4 cut(s)	630, 1210, 1583, 2368
Mox20I	TGGCCA	2 cut(s)	1641, 1865
Mph1103I	ATGCAT	2 cut(s)	1366, 1531
MroXI	GAANNNNTTC	1 cut(s)	2087
MscI	TGGCCA	2 cut(s)	1641, 1865
MslI	CAYNNNNRTG	2 cut(s)	2179, 2484
Msp20I	TGGCCA	2 cut(s)	1641, 1865
MspA1I	CMGCKG	2 cut(s)	617, 1098
MspI	CCGG	1 cut(s)	2215
MspR9I	CCNGG	6 cut(s)	35, 405, 1058, 1404, 2215, 2355
MunI	CAATTG	1 cut(s)	916
Mva1269I	GAATGC	2 cut(s)	802, 1364
MvaI	CCWGG	5 cut(s)	35, 405, 1058, 1404, 2355
MvnI	CGCG	1 cut(s)	690
MwoI	GCNNNNNNNGC	8 cut(s)	44, 271, 887, 1211, 1321, 1370, 1503, 1862
NciI	CCSGG	1 cut(s)	2215
NdeII	GATC	9 cut(s)	109, 232, 363, 870, 945, 1060, 1183, 1651, 1777
NheI	GCTAGC	1 cut(s)	2297
NlaIII	CATG	5 cut(s)	32, 1070, 1612, 1984, 2420
NlaIV	GGNNCC	7 cut(s)	481, 882, 1007, 1185, 2186, 2250, 2396
NmuCI	GTSAC	2 cut(s)	806, 2461
NsbI	TGCGCA	1 cut(s)	1290
NsiI	ATGCAT	2 cut(s)	1366, 1531
NspI	RCATGY	1 cut(s)	1612
OliI	CACNNNNGTG	1 cut(s)	2484
PaeR7I	CTCGAG	1 cut(s)	236
PciI	ACATGT	1 cut(s)	1608
PctI	GAATGC	2 cut(s)	802, 1364
PdmI	GAANNNNTTC	1 cut(s)	2087
PfeI	GAWTC	9 cut(s)	164, 382, 1480, 1537, 1786, 1840, 2009, 2030, 2358
PflFI	GACNNNGTC	1 cut(s)	993
PflMI	CCANNNNNTGG	1 cut(s)	2195
PfoI	TCCNGGA	1 cut(s)	1056
PkrI	GCNGC	8 cut(s)	149, 264, 563, 1001, 1716, 1948, 2047, 2145
PleI	GAGTC	2 cut(s)	764, 770
PpsI	GAGTC	2 cut(s)	764, 770
PscI	ACATGT	1 cut(s)	1608
Psp124BI	GAGCTC	1 cut(s)	1031
Psp6I	CCWGG	5 cut(s)	33, 403, 1056, 1402, 2353
PspFI	CCCAGC	3 cut(s)	377, 467, 694
PspGI	CCWGG	5 cut(s)	33, 403, 1056, 1402, 2353
PspN4I	GGNNCC	7 cut(s)	481, 882, 1007, 1185, 2186, 2250, 2396
PspPI	GGNCC	2 cut(s)	1550, 2063
PstI	CTGCAG	1 cut(s)	1004
PstNI	CAGNNNCTG	1 cut(s)	1321
PsuI	RGATCY	5 cut(s)	363, 870, 1060, 1183, 1777
PsyI	GACNNNGTC	1 cut(s)	993
PvuII	CAGCTG	1 cut(s)	617
RsaI	GTAC	5 cut(s)	434, 832, 1278, 2171, 2531
RsaNI	GTAC	5 cut(s)	433, 831, 1277, 2170, 2530
RseI	CAYNNNNRTG	2 cut(s)	2179, 2484
SacI	GAGCTC	1 cut(s)	1031
SatI	GCNGC	8 cut(s)	148, 263, 562, 1000, 1715, 1947, 2046, 2144
Sau3AI	GATC	9 cut(s)	109, 232, 363, 870, 945, 1060, 1183, 1651, 1777
Sau96I	GGNCC	2 cut(s)	1550, 2063
SchI	GAGTC	2 cut(s)	765, 770
ScrFI	CCNGG	6 cut(s)	35, 405, 1058, 1404, 2215, 2355
SduI	GDGCHC	4 cut(s)	130, 883, 905, 1031
SfaNI	GCATC	6 cut(s)	511, 1516, 1538, 2117, 2132, 2316
SfcI	CTRYAG	3 cut(s)	768, 840, 1000
Sfr274I	CTCGAG	1 cut(s)	236
SinI	GGWCC	2 cut(s)	1550, 2063
SlaI	CTCGAG	1 cut(s)	236
SmiMI	CAYNNNNRTG	2 cut(s)	2179, 2484
SmlI	CTYRAG	2 cut(s)	236, 497
SmoI	CTYRAG	2 cut(s)	236, 497
SsiI	CCGC	6 cut(s)	148, 428, 515, 987, 1098, 2522
SspI	AATATT	2 cut(s)	1130, 1828
SspMI	CTAG	5 cut(s)	195, 359, 984, 1704, 2298
SstI	GAGCTC	1 cut(s)	1031
StyD4I	CCNGG	6 cut(s)	33, 403, 1056, 1402, 2213, 2353
StyI	CCWWGG	4 cut(s)	884, 2014, 2398, 2434
TaaI	ACNGT	7 cut(s)	769, 1265, 1804, 1872, 2087, 2230, 2412
TaiI	ACGT	2 cut(s)	578, 1661
TaqI	TCGA	3 cut(s)	112, 237, 248
TatI	WGTACW	3 cut(s)	432, 1276, 2169
TauI	GCSGC	1 cut(s)	150
TfiI	GAWTC	9 cut(s)	164, 382, 1480, 1537, 1786, 1840, 2009, 2030, 2358
TscAI	CASTG	7 cut(s)	1326, 1765, 1875, 1917, 2061, 2145, 2491
TseFI	GTSAC	2 cut(s)	806, 2461
TseI	GCWGC	7 cut(s)	262, 561, 999, 1714, 1946, 2045, 2143
Tsp45I	GTSAC	2 cut(s)	806, 2461
TspDTI	ATGAA	6 cut(s)	400, 521, 669, 1055, 1949, 2405
TspGWI	ACGGA	3 cut(s)	1176, 2191, 2241
TspRI	CASTG	7 cut(s)	1326, 1765, 1875, 1917, 2061, 2145, 2491
Tth111I	GACNNNGTC	1 cut(s)	993
Van91I	CCANNNNNTGG	1 cut(s)	2195
VpaK11BI	GGWCC	2 cut(s)	1550, 2063
XapI	RAATTY	8 cut(s)	54, 189, 217, 283, 370, 537, 978, 1397
XceI	RCATGY	1 cut(s)	1612
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2021
XhoI	CTCGAG	1 cut(s)	236
XmiI	GTMKAC	1 cut(s)	2210
XmnI	GAANNNNTTC	1 cut(s)	2087
XspI	CTAG	5 cut(s)	195, 359, 984, 1704, 2298
Zsp2I	ATGCAT	2 cut(s)	1366, 1531

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.