Belongs to the universal ribosomal protein uL6 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G05190 |
| fragaria_vesca | FvH4_6g43280 |
| malus_domestica | MD09G1107800.v1.1 MD09G1108400.v1.1 MD17G1096300.v1.1 |
| prunus_persica | Prupe.1G100300_v2.0.a1 |
| pyrus_communis | pycom09g03090 pycom17g09240 |
| rosa_chinensis | RchiOBHm_Chr2g0159551 |
| rosa_laevigata | RLG00000021165 |
| rosa_multiflora | Rmu_sc0004260.1_g000004 Rmu_sc0012414.1_g000013 |
| rosa_roxburghii | Rroxscaffold_2G00090410 |
| rosa_rugosa | Rorug02G0476800 |
| rosa_samantha | Rh2BG556800 Rh2CG527000 |
| rosa_wichuraiana | Rw2G044970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 247 |
| AccIII | TCCGGA | 1 cut(s) | 595 |
| AciI | CCGC | 2 cut(s) | 245, 537 |
| AfaI | GTAC | 2 cut(s) | 93, 447 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 101, 608 |
| AgsI | TTSAA | 3 cut(s) | 112, 161, 512 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 126, 158 |
| AluBI | AGCT | 2 cut(s) | 229, 422 |
| AluI | AGCT | 2 cut(s) | 229, 422 |
| Alw26I | GTCTC | 2 cut(s) | 299, 583 |
| Aor13HI | TCCGGA | 1 cut(s) | 595 |
| ApeKI | GCWGC | 4 cut(s) | 151, 226, 394, 569 |
| AspS9I | GGNCC | 1 cut(s) | 215 |
| AsuHPI | GGTGA | 1 cut(s) | 15 |
| AvaII | GGWCC | 1 cut(s) | 215 |
| BbsI | GAAGAC | 1 cut(s) | 122 |
| BbvI | GCAGC | 4 cut(s) | 163, 238, 381, 556 |
| BccI | CCATC | 4 cut(s) | 175, 472, 474, 485 |
| BcoDI | GTCTC | 2 cut(s) | 299, 583 |
| BfaI | CTAG | 1 cut(s) | 309 |
| BglII | AGATCT | 1 cut(s) | 438 |
| BisI | GCNGC | 4 cut(s) | 152, 227, 395, 570 |
| BlsI | GCNGC | 4 cut(s) | 153, 228, 396, 571 |
| Bme18I | GGWCC | 1 cut(s) | 215 |
| BmgT120I | GGNCC | 1 cut(s) | 215 |
| BmiI | GGNNCC | 2 cut(s) | 216, 600 |
| BmsI | GCATC | 1 cut(s) | 315 |
| BpiI | GAAGAC | 1 cut(s) | 122 |
| BsaI | GGTCTC | 1 cut(s) | 583 |
| BsaWI | WCCGGW | 1 cut(s) | 595 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 101, 608 |
| Bse1I | ACTGG | 2 cut(s) | 405, 470 |
| BseAI | TCCGGA | 1 cut(s) | 595 |
| BseGI | GGATG | 3 cut(s) | 167, 466, 483 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 101, 608 |
| BseNI | ACTGG | 2 cut(s) | 405, 470 |
| BseXI | GCAGC | 4 cut(s) | 163, 238, 381, 556 |
| Bsh1236I | CGCG | 1 cut(s) | 247 |
| BsiSI | CCGG | 1 cut(s) | 596 |
| BslFI | GGGAC | 2 cut(s) | 228, 292 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 101, 608 |
| BsmAI | GTCTC | 2 cut(s) | 299, 583 |
| BsmFI | GGGAC | 2 cut(s) | 228, 292 |
| Bso31I | GGTCTC | 1 cut(s) | 583 |
| Bsp13I | TCCGGA | 1 cut(s) | 595 |
| Bsp143I | GATC | 2 cut(s) | 438, 576 |
| BspACI | CCGC | 2 cut(s) | 245, 537 |
| BspEI | TCCGGA | 1 cut(s) | 595 |
| BspFNI | CGCG | 1 cut(s) | 247 |
| BspLI | GGNNCC | 2 cut(s) | 216, 600 |
| BspTNI | GGTCTC | 1 cut(s) | 583 |
| BsrI | ACTGG | 2 cut(s) | 405, 470 |
| BssMI | GATC | 2 cut(s) | 438, 576 |
| Bst6I | CTCTTC | 1 cut(s) | 383 |
| BstDEI | CTNAG | 2 cut(s) | 284, 449 |
| BstF5I | GGATG | 3 cut(s) | 167, 466, 483 |
| BstFNI | CGCG | 1 cut(s) | 247 |
| BstKTI | GATC | 2 cut(s) | 441, 579 |
| BstMAI | GTCTC | 2 cut(s) | 299, 583 |
| BstMBI | GATC | 2 cut(s) | 438, 576 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 253 |
| BstUI | CGCG | 1 cut(s) | 247 |
| BstV1I | GCAGC | 4 cut(s) | 163, 238, 381, 556 |
| BstV2I | GAAGAC | 1 cut(s) | 122 |
| BstX2I | RGATCY | 1 cut(s) | 438 |
| BstYI | RGATCY | 1 cut(s) | 438 |
| BtsCI | GGATG | 3 cut(s) | 167, 466, 483 |
| Cfr13I | GGNCC | 1 cut(s) | 215 |
| Csp6I | GTAC | 2 cut(s) | 92, 446 |
| CviAII | CATG | 2 cut(s) | 98, 358 |
| CviJI | RGCY | 8 cut(s) | 5, 53, 154, 200, 229, 334, 394, 422 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 53, 154, 200, 229, 334, 394, 422 |
| CviQI | GTAC | 2 cut(s) | 92, 446 |
| DdeI | CTNAG | 2 cut(s) | 284, 449 |
| DpnI | GATC | 2 cut(s) | 440, 578 |
| DpnII | GATC | 2 cut(s) | 438, 576 |
| Eam1104I | CTCTTC | 1 cut(s) | 383 |
| EarI | CTCTTC | 1 cut(s) | 383 |
| Eco31I | GGTCTC | 1 cut(s) | 583 |
| Eco47I | GGWCC | 1 cut(s) | 215 |
| FaeI | CATG | 2 cut(s) | 101, 361 |
| FaiI | YATR | 7 cut(s) | 99, 359, 497, 543, 604, 627, 641 |
| FaqI | GGGAC | 2 cut(s) | 228, 292 |
| FatI | CATG | 2 cut(s) | 97, 357 |
| FauI | CCCGC | 1 cut(s) | 252 |
| Fnu4HI | GCNGC | 4 cut(s) | 152, 227, 395, 570 |
| FokI | GGATG | 3 cut(s) | 154, 453, 490 |
| Fsp4HI | GCNGC | 4 cut(s) | 152, 227, 395, 570 |
| FspBI | CTAG | 1 cut(s) | 309 |
| GluI | GCNGC | 4 cut(s) | 152, 227, 395, 570 |
| HapII | CCGG | 1 cut(s) | 596 |
| Hin1II | CATG | 2 cut(s) | 101, 361 |
| HinfI | GANTC | 5 cut(s) | 75, 134, 272, 280, 525 |
| HpaII | CCGG | 1 cut(s) | 596 |
| HphI | GGTGA | 1 cut(s) | 15 |
| Hpy166II | GTNNAC | 1 cut(s) | 92 |
| Hpy188I | TCNGA | 3 cut(s) | 264, 293, 324 |
| Hpy188III | TCNNGA | 5 cut(s) | 138, 340, 488, 580, 596 |
| Hpy8I | GTNNAC | 1 cut(s) | 92 |
| HpyAV | CCTTC | 8 cut(s) | 185, 259, 306, 425, 499, 639, 643, 647 |
| HpyCH4V | TGCA | 3 cut(s) | 129, 328, 397 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 253 |
| HpyF3I | CTNAG | 2 cut(s) | 284, 449 |
| Hsp92II | CATG | 2 cut(s) | 101, 361 |
| Kpn2I | TCCGGA | 1 cut(s) | 595 |
| Kzo9I | GATC | 2 cut(s) | 438, 576 |
| Lsp1109I | GCAGC | 4 cut(s) | 163, 238, 381, 556 |
| LweI | GCATC | 1 cut(s) | 315 |
| MaeI | CTAG | 1 cut(s) | 309 |
| MaeIII | GTNAC | 1 cut(s) | 175 |
| MalI | GATC | 2 cut(s) | 440, 578 |
| MboI | GATC | 2 cut(s) | 438, 576 |
| MboII | GAAGA | 4 cut(s) | 124, 127, 400, 524 |
| MfeI | CAATTG | 1 cut(s) | 156 |
| MflI | RGATCY | 1 cut(s) | 438 |
| MluCI | AATT | 3 cut(s) | 40, 141, 156 |
| MlyI | GAGTC | 1 cut(s) | 274 |
| MnlI | CCTC | 6 cut(s) | 19, 31, 105, 262, 384, 603 |
| MroI | TCCGGA | 1 cut(s) | 595 |
| MslI | CAYNNNNRTG | 1 cut(s) | 500 |
| MspI | CCGG | 1 cut(s) | 596 |
| MunI | CAATTG | 1 cut(s) | 156 |
| MvnI | CGCG | 1 cut(s) | 247 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 253 |
| NdeII | GATC | 2 cut(s) | 438, 576 |
| NlaIII | CATG | 2 cut(s) | 101, 361 |
| NlaIV | GGNNCC | 2 cut(s) | 216, 600 |
| NmuCI | GTSAC | 1 cut(s) | 175 |
| PfeI | GAWTC | 4 cut(s) | 75, 134, 272, 525 |
| PkrI | GCNGC | 4 cut(s) | 153, 228, 396, 571 |
| PleI | GAGTC | 1 cut(s) | 274 |
| PpsI | GAGTC | 1 cut(s) | 274 |
| PspN4I | GGNNCC | 2 cut(s) | 216, 600 |
| PspPI | GGNCC | 1 cut(s) | 215 |
| PsuI | RGATCY | 1 cut(s) | 438 |
| RsaI | GTAC | 2 cut(s) | 93, 447 |
| RsaNI | GTAC | 2 cut(s) | 92, 446 |
| RseI | CAYNNNNRTG | 1 cut(s) | 500 |
| SatI | GCNGC | 4 cut(s) | 152, 227, 395, 570 |
| Sau3AI | GATC | 2 cut(s) | 438, 576 |
| Sau96I | GGNCC | 1 cut(s) | 215 |
| SchI | GAGTC | 1 cut(s) | 274 |
| SetI | ASST | 9 cut(s) | 28, 97, 196, 231, 409, 424, 510, 595, 613 |
| SfaNI | GCATC | 1 cut(s) | 315 |
| SinI | GGWCC | 1 cut(s) | 215 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 500 |
| Sse9I | AATT | 3 cut(s) | 40, 141, 156 |
| SsiI | CCGC | 2 cut(s) | 245, 537 |
| SspMI | CTAG | 1 cut(s) | 309 |
| TaqI | TCGA | 2 cut(s) | 418, 575 |
| TaqII | GACCGA | 1 cut(s) | 548 |
| TasI | AATT | 3 cut(s) | 40, 141, 156 |
| TfiI | GAWTC | 4 cut(s) | 75, 134, 272, 525 |
| TseFI | GTSAC | 1 cut(s) | 175 |
| TseI | GCWGC | 4 cut(s) | 151, 226, 394, 569 |
| Tsp45I | GTSAC | 1 cut(s) | 175 |
| TspDTI | ATGAA | 1 cut(s) | 648 |
| TspGWI | ACGGA | 1 cut(s) | 365 |
| VpaK11BI | GGWCC | 1 cut(s) | 215 |
| XspI | CTAG | 1 cut(s) | 309 |