Belongs to the universal ribosomal protein uL6 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G05190 |
| fragaria_vesca | FvH4_6g43280 |
| malus_domestica | MD09G1107800.v1.1 MD09G1108400.v1.1 MD17G1096300.v1.1 |
| prunus_persica | Prupe.1G100300_v2.0.a1 |
| pyrus_communis | pycom09g03090 pycom17g09240 |
| rosa_chinensis | RchiOBHm_Chr2g0159551 |
| rosa_laevigata | RLG00000021165 |
| rosa_multiflora | Rmu_sc0004260.1_g000004 Rmu_sc0012414.1_g000013 |
| rosa_roxburghii | Rroxscaffold_2G00090410 |
| rosa_rugosa | Rorug02G0476800 |
| rosa_samantha | Rh2BG556800 Rh2CG527000 |
| rosa_wichuraiana | Rw2G044970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 43 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 608 |
| AgsI | TTSAA | 2 cut(s) | 115, 164 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 129, 161 |
| AluBI | AGCT | 1 cut(s) | 232 |
| AluI | AGCT | 1 cut(s) | 232 |
| Alw26I | GTCTC | 2 cut(s) | 299, 583 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 205 |
| AoxI | GGCC | 2 cut(s) | 217, 315 |
| ApaI | GGGCCC | 1 cut(s) | 221 |
| ApeKI | GCWGC | 2 cut(s) | 229, 569 |
| AspS9I | GGNCC | 3 cut(s) | 217, 218, 315 |
| AsuHPI | GGTGA | 1 cut(s) | 301 |
| BaeGI | GKGCMC | 1 cut(s) | 221 |
| BanII | GRGCYC | 1 cut(s) | 221 |
| BauI | CACGAG | 1 cut(s) | 249 |
| BbsI | GAAGAC | 1 cut(s) | 125 |
| BbvI | GCAGC | 2 cut(s) | 241, 556 |
| BccI | CCATC | 4 cut(s) | 472, 474, 485, 584 |
| BciVI | GTATCC | 1 cut(s) | 382 |
| BcoDI | GTCTC | 2 cut(s) | 299, 583 |
| BfaI | CTAG | 1 cut(s) | 428 |
| BfmI | CTRYAG | 1 cut(s) | 395 |
| BfuI | GTATCC | 1 cut(s) | 382 |
| BisI | GCNGC | 2 cut(s) | 230, 570 |
| BlsI | GCNGC | 2 cut(s) | 231, 571 |
| BmgT120I | GGNCC | 3 cut(s) | 217, 218, 315 |
| BmiI | GGNNCC | 1 cut(s) | 219 |
| BpiI | GAAGAC | 1 cut(s) | 125 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 257, 289 |
| BpmI | CTGGAG | 1 cut(s) | 579 |
| BsaI | GGTCTC | 1 cut(s) | 583 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 608 |
| Bse1I | ACTGG | 1 cut(s) | 470 |
| BseGI | GGATG | 2 cut(s) | 466, 483 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 608 |
| BseNI | ACTGG | 1 cut(s) | 470 |
| BseSI | GKGCMC | 1 cut(s) | 221 |
| BseXI | GCAGC | 2 cut(s) | 241, 556 |
| Bsh1285I | CGRYCG | 1 cut(s) | 47 |
| BshFI | GGCC | 2 cut(s) | 219, 317 |
| BsiEI | CGRYCG | 1 cut(s) | 47 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 608 |
| BsmAI | GTCTC | 2 cut(s) | 299, 583 |
| BsnI | GGCC | 2 cut(s) | 219, 317 |
| Bso31I | GGTCTC | 1 cut(s) | 583 |
| Bsp120I | GGGCCC | 1 cut(s) | 217 |
| Bsp1286I | GDGCHC | 1 cut(s) | 221 |
| BspACI | CCGC | 1 cut(s) | 43 |
| BspANI | GGCC | 2 cut(s) | 219, 317 |
| BspLI | GGNNCC | 1 cut(s) | 219 |
| BspTNI | GGTCTC | 1 cut(s) | 583 |
| BsrI | ACTGG | 1 cut(s) | 470 |
| BssSI | CACGAG | 1 cut(s) | 249 |
| Bst2BI | CACGAG | 1 cut(s) | 249 |
| Bst4CI | ACNGT | 3 cut(s) | 124, 178, 399 |
| Bst6I | CTCTTC | 1 cut(s) | 383 |
| BstDEI | CTNAG | 1 cut(s) | 284 |
| BstF5I | GGATG | 2 cut(s) | 466, 483 |
| BstMAI | GTCTC | 2 cut(s) | 299, 583 |
| BstMCI | CGRYCG | 1 cut(s) | 47 |
| BstSFI | CTRYAG | 1 cut(s) | 395 |
| BstSLI | GKGCMC | 1 cut(s) | 221 |
| BstV1I | GCAGC | 2 cut(s) | 241, 556 |
| BstV2I | GAAGAC | 1 cut(s) | 125 |
| BsuI | GTATCC | 1 cut(s) | 382 |
| BsuRI | GGCC | 2 cut(s) | 219, 317 |
| BtsCI | GGATG | 2 cut(s) | 466, 483 |
| BtsI | GCAGTG | 2 cut(s) | 84, 306 |
| BtsIMutI | CAGTG | 4 cut(s) | 84, 174, 182, 306 |
| CaiI | CAGNNNCTG | 1 cut(s) | 205 |
| Cfr13I | GGNCC | 3 cut(s) | 217, 218, 315 |
| CviJI | RGCY | 9 cut(s) | 5, 50, 203, 219, 232, 317, 334, 394, 601 |
| CviKI_1 | RGCY | 9 cut(s) | 5, 50, 203, 219, 232, 317, 334, 394, 601 |
| DdeI | CTNAG | 1 cut(s) | 284 |
| Eam1104I | CTCTTC | 1 cut(s) | 383 |
| EarI | CTCTTC | 1 cut(s) | 383 |
| Eco24I | GRGCYC | 1 cut(s) | 221 |
| Eco31I | GGTCTC | 1 cut(s) | 583 |
| EcoO109I | RGGNCCY | 2 cut(s) | 217, 218 |
| EcoT38I | GRGCYC | 1 cut(s) | 221 |
| FaiI | YATR | 7 cut(s) | 359, 417, 497, 530, 543, 604, 627 |
| Fnu4HI | GCNGC | 2 cut(s) | 230, 570 |
| FokI | GGATG | 2 cut(s) | 453, 490 |
| FriOI | GRGCYC | 1 cut(s) | 221 |
| Fsp4HI | GCNGC | 2 cut(s) | 230, 570 |
| FspBI | CTAG | 1 cut(s) | 428 |
| GluI | GCNGC | 2 cut(s) | 230, 570 |
| GsuI | CTGGAG | 1 cut(s) | 579 |
| HaeIII | GGCC | 2 cut(s) | 219, 317 |
| HinfI | GANTC | 5 cut(s) | 137, 272, 381, 451, 525 |
| HphI | GGTGA | 1 cut(s) | 301 |
| Hpy166II | GTNNAC | 1 cut(s) | 82 |
| Hpy188I | TCNGA | 1 cut(s) | 581 |
| Hpy188III | TCNNGA | 8 cut(s) | 141, 206, 235, 276, 340, 385, 488, 596 |
| Hpy8I | GTNNAC | 1 cut(s) | 82 |
| HpyAV | CCTTC | 5 cut(s) | 188, 262, 306, 425, 499 |
| HpyCH4III | ACNGT | 3 cut(s) | 124, 178, 399 |
| HpyCH4V | TGCA | 2 cut(s) | 95, 328 |
| HpyF3I | CTNAG | 1 cut(s) | 284 |
| LmnI | GCTCC | 1 cut(s) | 94 |
| Lsp1109I | GCAGC | 2 cut(s) | 241, 556 |
| MaeI | CTAG | 1 cut(s) | 428 |
| MaeIII | GTNAC | 1 cut(s) | 178 |
| MboII | GAAGA | 6 cut(s) | 127, 130, 304, 400, 524, 657 |
| MfeI | CAATTG | 1 cut(s) | 159 |
| MhlI | GDGCHC | 1 cut(s) | 221 |
| MluCI | AATT | 6 cut(s) | 37, 144, 159, 188, 555, 636 |
| MlyI | GAGTC | 2 cut(s) | 266, 460 |
| MnlI | CCTC | 4 cut(s) | 384, 429, 603, 646 |
| MslI | CAYNNNNRTG | 1 cut(s) | 500 |
| MunI | CAATTG | 1 cut(s) | 159 |
| NlaIV | GGNNCC | 1 cut(s) | 219 |
| NmuCI | GTSAC | 1 cut(s) | 178 |
| PfeI | GAWTC | 3 cut(s) | 137, 381, 525 |
| PkrI | GCNGC | 2 cut(s) | 231, 571 |
| PleI | GAGTC | 2 cut(s) | 266, 459 |
| PpsI | GAGTC | 2 cut(s) | 266, 459 |
| PspN4I | GGNNCC | 1 cut(s) | 219 |
| PspOMI | GGGCCC | 1 cut(s) | 217 |
| PspPI | GGNCC | 3 cut(s) | 217, 218, 315 |
| PstNI | CAGNNNCTG | 1 cut(s) | 205 |
| RseI | CAYNNNNRTG | 1 cut(s) | 500 |
| SatI | GCNGC | 2 cut(s) | 230, 570 |
| Sau96I | GGNCC | 3 cut(s) | 217, 218, 315 |
| SchI | GAGTC | 2 cut(s) | 266, 460 |
| SduI | GDGCHC | 1 cut(s) | 221 |
| SetI | ASST | 5 cut(s) | 199, 234, 510, 595, 613 |
| SfcI | CTRYAG | 1 cut(s) | 395 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 500 |
| Sse9I | AATT | 6 cut(s) | 37, 144, 159, 188, 555, 636 |
| SsiI | CCGC | 1 cut(s) | 43 |
| SspMI | CTAG | 1 cut(s) | 428 |
| TaaI | ACNGT | 3 cut(s) | 124, 178, 399 |
| TaqI | TCGA | 3 cut(s) | 140, 236, 384 |
| TasI | AATT | 6 cut(s) | 37, 144, 159, 188, 555, 636 |
| TfiI | GAWTC | 3 cut(s) | 137, 381, 525 |
| TscAI | CASTG | 4 cut(s) | 91, 181, 189, 306 |
| TseFI | GTSAC | 1 cut(s) | 178 |
| TseI | GCWGC | 2 cut(s) | 229, 569 |
| Tsp45I | GTSAC | 1 cut(s) | 178 |
| TspDTI | ATGAA | 2 cut(s) | 64, 648 |
| TspGWI | ACGGA | 1 cut(s) | 365 |
| TspRI | CASTG | 4 cut(s) | 91, 181, 189, 306 |
| XspI | CTAG | 1 cut(s) | 428 |