Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0009004

Physical Location & Seq

Genomic Coordinates Reverse (-)

7015315 .. 7019938

Gene Structure 4624 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2016 bp

ATGCTTGTTGTTCCACCTGGATCTGGCATTGTTCATCAGGTTAATCTTGAATATCTTGGACGGGTTGTTTTCAACAATGATGGCTTACTCTACCCTGATAGTGTGGTTGGAACTGATTCCCATACAACCATGATTGACGGGTTAGGAGTTGCTGGATGGGGAGTTGGAGGTATCGAAGCTGAAGCTACTATGCTTGGCCAGCCAATGAGCATGGTGTTGCCTGGTGTTGTCGGGTTCAAGTTATCTGGAAAGTTAAACAATGGTGTTACTGCTACTGACTTGGTTTTGACTGTCACACAAATACTGAGGAAGCATGGAGTTGTTGGAAAATTTGTTGAATTCTATGGGGATGGTATGGGTGAACTATCATTAGCTGACAGGGCCACTATTGCCAATATGTCCCCTGAGTATGGTGCAACCATGGGTTTCTTCCCTGTCGATCATGTTACTTTACAACCTCATGACCGTGTGACTTTGAAAGACATGAAATCTGATTGGCATGCTTGTCTTGATAGCAAGGTTGGGTTCAAGGGATTTGCTATACCAAAAGAGGTGCAAAACAAAGTGGCAAAGTTTCAGTTCAATGGACAGCCAGCAGAGCTTAAGCATGGTAATGTTGTGATAGCTGCAATTACAAGTTGCACCAATACATCAAACCCAAGTGTCATGCTTGGGGCTGCTCTCGTTGCAAAGAAGGCTAGTGAACTTGGTCTGCAGGTCAAACCATGGGTTAAAACAAGTCTTGCCCCCGGTTCTGGAGTTGTTACAAAATATTTGCTACAGAGCGGATTGCAACAGTATTTTGATCGACAAGGTTTCAATATTGTTGGATATGGGTGCACAACATGCATTGGGAATTCAGGGGATCTGCACGAAAGTGTTGCTTCTGCTATATCGGAAAATGACATTGTAGCAGCTGCTGTGCTCTCTGGAAACAGGAATTTTGAGGGCCGTGTTCATCCGTTGACGAGAGCTAATTACCTTGCCTCTCCTCCTTTAGTGGTTGCTTATGCCCTTGCTGGAACGGTTGACATTGACTTTGATAAGGAGCCAATTGGAACAGGGAAGGATGGTAAGAGCGTCTATTTCAGGGATATCTGGCCGTCCACAGAGGAGATTGCTGAGGTAGTGCAATCCAGTGTGTTGCCAGATATGTTCAAGAGCACTTACGAGTCAATTACTAAGGGCAACCCCATTTGGAATCAGCTATCAGTTCCCGAATCCAAACTGTACTCATGGGACCCTAATTCAACCTACATTCATGAGCCCCCATACTTCAAGGATATGACCATGGATCGTCCTGGTGCTCATGGAGTGAAGGATGCGTACTGCTTGTTGAATTTTGGTGACAGTATTACAACTGATCACATCTCCCCAGCGGGAAGCATCAACAAGGACAGTCCTGCAGCCAAGTACCTTCTTGAGCGTGGGGTGGACCGCAAAGACTTCAATTCTTATGGAAGTCGTCGTGGCAATGATGAAGTTATGGCCAGGGGAACTTTTGCCAATATCCGCCTCGTTAACAAGCTTTTGAATGGGGAAGTAGGGCCTAAAACAGTTCACATTCCTACCGGGGAGAAACTCTTTGTCTTTGATGCAGCAACTAGATACAAGGCTGATGGGCACGACACTATTGTAATAGCCGGAGCCGAGTATGGAAGTGGAAGCTCCAGGGATTGGGCCGCCAAGGGCCCAATGCTATTGGGCGTTAAAGCAGTGATTGCTAAAAGTTTCGAAAGAATCCATCGCAGTAATTTGGTGGGGATGGGTATCATTCCTCTTTGTTTCAAGGCCGGTGAGGATGCAGACACGCTAGGATTGACTGGTCACGAACGGTATACCATTGACCTCCCAAGCAACATTAGTGAGATTAAACCTGGCCAAGATGTGACCGTCACAACGGACAATGGAAAATCTTTCACCTGCACTGTTCGCTTTGACACTGAGGTGGAACTGGAATACTTCAACCACGGAGGCATTCTTCAATACGTTATCAGGAACCTAAGCAAGCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0003674 GO:0003824 GO:0003994 GO:0005488 GO:0005507 GO:0005524 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005829 GO:0006082 GO:0006101 GO:0006102 GO:0006950 GO:0006970 GO:0006979 GO:0007275 GO:0008144 GO:0008150 GO:0008152 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010038 GO:0016020 GO:0016829 GO:0016835 GO:0016836 GO:0016999 GO:0017076 GO:0017144 GO:0019752 GO:0030312 GO:0030554 GO:0031090 GO:0031667 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0033993 GO:0035639 GO:0036094 GO:0042221 GO:0042594 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0046872 GO:0046914 GO:0048856 GO:0050896 GO:0071704 GO:0071944 GO:0072350 GO:0090351 GO:0097159 GO:0097305 GO:0097367 GO:0098588 GO:0098805 GO:1901265 GO:1901363 GO:1901700 GO:1990641

KEGG Pathways

Metabolic & Signaling

ko00020 ko00630 ko00720 ko01100 ko01110 ko01120 ko01130 ko01200 ko01210 ko01230 map00020 map00630 map00720 map01100 map01110 map01120 map01130 map01200 map01210 map01230

Pfam Domains

Protein Families

Aconitase Aconitase_C

Protein Analysis

672

Amino Acids

72.45

Weight (kDa)

5.96

Isoelectric Point (pI)

28.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aconitase	PF00330	3 - 151	1.4e-63	Aconitase family (aconitate hydratase)
Aconitase	PF00330	152 - 341	9.2e-52	Aconitase family (aconitate hydratase)
Aconitase_C	PF00694	470 - 598	5.6e-41	Aconitase C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009004)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G05710
fragaria_vesca	FvH4_6g43190
malus_domestica	MD09G1108800.v1.1 MD17G1096700.v1.1
prunus_persica	Prupe.3G217300_v2.0.a1 Prupe.3G217300_v2.0.a1
pyrus_communis	pycom09g03120 pycom17g09260
rosa_chinensis	RchiOBHm_Chr2g0159291
rosa_laevigata	RLG00000021152
rosa_multiflora	Rmu_sc0004800.1_g000001 Rmu_sc0007806.1_g000010 Rmu_sc0010590.1_g000001
rosa_roxburghii	Rroxscaffold_2G00090620
rosa_rugosa	Rorug02G0475700
rosa_samantha	Rh2AG542100 Rh2BG554700 Rh2CG524800 Rh2DG564400 Rh5AG522200
rosa_wichuraiana	Rw2G044840 Rw5G048460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1931
Acc36I	ACCTGC	2 cut(s)	706, 1931
AccB7I	CCANNNNNTGG	1 cut(s)	1677
AccBSI	CCGCTC	1 cut(s)	786
AccI	GTMKAC	1 cut(s)	1838
AciI	CCGC	5 cut(s)	786, 1379, 1438, 1513, 1683
AclWI	GGATC	3 cut(s)	28, 873, 1302
AcoI	YGGCCR	4 cut(s)	196, 1100, 1488, 1879
AcsI	RAATTY	5 cut(s)	329, 338, 856, 940, 1339
AcuI	CTGAAG	1 cut(s)	201
AfaI	GTAC	3 cut(s)	1232, 1328, 1415
AfiI	CCNNNNNNNGG	4 cut(s)	23, 410, 755, 1677
AflII	CTTAAG	1 cut(s)	602
AjnI	CCWGG	6 cut(s)	16, 220, 1300, 1490, 1670, 1876
AleI	CACNNNNGTG	2 cut(s)	876, 1946
Alw21I	GWGCWC	4 cut(s)	842, 927, 1166, 1309
Alw44I	GTGCAC	1 cut(s)	838
AlwI	GGATC	3 cut(s)	28, 873, 1302
AlwNI	CAGNNNCTG	1 cut(s)	920
ApaI	GGGCCC	1 cut(s)	1694
ApaLI	GTGCAC	1 cut(s)	838
ApeKI	GCWGC	6 cut(s)	626, 677, 914, 917, 1406, 1598
ApoI	RAATTY	5 cut(s)	329, 338, 856, 940, 1339
ArsI	GACNNNNNNTTYG	2 cut(s)	1022, 1054
Asp700I	GAANNNNTTC	1 cut(s)	115
AspS9I	GGNCC	8 cut(s)	381, 949, 1240, 1435, 1547, 1680, 1690, 1691
AsuC2I	CCSGG	2 cut(s)	750, 1573
AsuHPI	GGTGA	4 cut(s)	371, 1358, 1808, 1912
AsuII	TTCGAA	1 cut(s)	1734
AvaII	GGWCC	2 cut(s)	1240, 1435
BaeGI	GKGCMC	3 cut(s)	842, 1626, 1694
BalI	TGGCCA	3 cut(s)	198, 1490, 1881
BanII	GRGCYC	2 cut(s)	1269, 1694
BarI	GAAGNNNNNNTAC	2 cut(s)	1310, 1342
Bbv12I	GWGCWC	4 cut(s)	842, 927, 1166, 1309
BbvCI	CCTCAGC	1 cut(s)	1122
BbvI	GCAGC	6 cut(s)	613, 664, 904, 926, 1418, 1610
BccI	CCATC	7 cut(s)	74, 150, 344, 1064, 1613, 1752, 1759
BceAI	ACGGC	2 cut(s)	936, 1087
BcgI	CGANNNNNNTGC	2 cut(s)	863, 897
BciT130I	CCWGG	6 cut(s)	18, 222, 1302, 1492, 1672, 1878
BclI	TGATCA	1 cut(s)	1363
BcnI	CCSGG	2 cut(s)	750, 1573
BfaI	CTAG	3 cut(s)	699, 1605, 1814
BfmI	CTRYAG	3 cut(s)	713, 779, 1404
BfrI	CTTAAG	1 cut(s)	602
BfuAI	ACCTGC	2 cut(s)	706, 1931
BisI	GCNGC	7 cut(s)	627, 678, 915, 918, 1407, 1599, 1683
BlsI	GCNGC	7 cut(s)	628, 679, 916, 919, 1408, 1600, 1684
Bme1390I	CCNGG	8 cut(s)	18, 222, 750, 1302, 1492, 1573, 1672, 1878
Bme18I	GGWCC	2 cut(s)	1240, 1435
BmgT120I	GGNCC	8 cut(s)	381, 949, 1240, 1435, 1547, 1680, 1690, 1691
BmiI	GGNNCC	6 cut(s)	1050, 1241, 1242, 1648, 1692, 2000
BmrFI	CCNGG	8 cut(s)	18, 222, 750, 1302, 1492, 1573, 1672, 1878
BmsI	GCATC	4 cut(s)	1312, 1395, 1585, 1792
BpmI	CTGGAG	2 cut(s)	777, 1654
Bpu10I	CCTNAGC	2 cut(s)	1122, 2003
Bpu14I	TTCGAA	1 cut(s)	1734
BpuEI	CTTGAG	1 cut(s)	1442
BpuMI	CCSGG	2 cut(s)	750, 1573
BsaBI	GATNNNNATC	1 cut(s)	1769
BsaJI	CCNNGG	9 cut(s)	420, 725, 748, 1290, 1491, 1572, 1671, 1686, 1969
Bsc4I	CCNNNNNNNGG	4 cut(s)	23, 410, 755, 1677
Bse118I	RCCGGY	1 cut(s)	1793
Bse1I	ACTGG	3 cut(s)	1137, 1828, 1959
Bse3DI	GCAATG	1 cut(s)	1480
Bse8I	GATNNNNATC	1 cut(s)	1769
BseBI	CCWGG	6 cut(s)	18, 222, 1302, 1492, 1672, 1878
BseDI	CCNNGG	9 cut(s)	420, 725, 748, 1290, 1491, 1572, 1671, 1686, 1969
BseGI	GGATG	7 cut(s)	161, 355, 958, 1075, 1327, 1770, 1807
BseJI	GATNNNNATC	1 cut(s)	1769
BseLI	CCNNNNNNNGG	4 cut(s)	23, 410, 755, 1677
BseMI	GCAATG	1 cut(s)	1480
BseMII	CTCAG	4 cut(s)	296, 396, 1113, 1935
BseNI	ACTGG	3 cut(s)	1137, 1828, 1959
BseRI	GAGGAG	2 cut(s)	981, 1127
BseSI	GKGCMC	3 cut(s)	842, 1626, 1694
BseXI	GCAGC	6 cut(s)	613, 664, 904, 926, 1418, 1610
BseYI	CCCAGC	1 cut(s)	1375
BsgI	GTGCAG	2 cut(s)	854, 1909
BsiHKAI	GWGCWC	4 cut(s)	842, 927, 1166, 1309
BsiSI	CCGG	4 cut(s)	750, 1572, 1644, 1794
BslFI	GGGAC	2 cut(s)	385, 1253
BslI	CCNNNNNNNGG	4 cut(s)	23, 410, 755, 1677
BsmFI	GGGAC	2 cut(s)	385, 1253
BsmI	GAATGC	1 cut(s)	1977
Bsp119I	TTCGAA	1 cut(s)	1734
Bsp120I	GGGCCC	1 cut(s)	1690
Bsp1286I	GDGCHC	7 cut(s)	842, 927, 1166, 1269, 1309, 1626, 1694
Bsp143I	GATC	6 cut(s)	20, 439, 805, 865, 1294, 1363
Bsp19I	CCATGG	3 cut(s)	420, 725, 1290
BspACI	CCGC	5 cut(s)	786, 1379, 1438, 1513, 1683
BspCNI	CTCAG	4 cut(s)	297, 397, 1114, 1936
BspHI	TCATGA	2 cut(s)	460, 1261
BspLI	GGNNCC	6 cut(s)	1050, 1241, 1242, 1648, 1692, 2000
BspMAI	CTGCAG	2 cut(s)	717, 1408
BspMI	ACCTGC	2 cut(s)	706, 1931
BspPI	GGATC	3 cut(s)	28, 873, 1302
BspT104I	TTCGAA	1 cut(s)	1734
BspTI	CTTAAG	1 cut(s)	602
BsrBI	CCGCTC	1 cut(s)	786
BsrDI	GCAATG	1 cut(s)	1480
BsrFI	RCCGGY	1 cut(s)	1793
BsrI	ACTGG	3 cut(s)	1137, 1828, 1959
BssAI	RCCGGY	1 cut(s)	1793
BssECI	CCNNGG	9 cut(s)	420, 725, 748, 1290, 1491, 1572, 1671, 1686, 1969
BssMI	GATC	6 cut(s)	20, 439, 805, 865, 1294, 1363
BssNAI	GTATAC	1 cut(s)	1839
BssT1I	CCWWGG	4 cut(s)	420, 725, 1290, 1686
Bst1107I	GTATAC	1 cut(s)	1839
Bst2UI	CCWGG	6 cut(s)	18, 222, 1302, 1492, 1672, 1878
BstAFI	CTTAAG	1 cut(s)	602
BstAPI	GCANNNNNTGC	2 cut(s)	846, 1721
BstBI	TTCGAA	1 cut(s)	1734
BstC8I	GCNNGC	4 cut(s)	200, 501, 594, 2009
BstDEI	CTNAG	6 cut(s)	305, 405, 1122, 1182, 1944, 2003
BstDSI	CCRYGG	4 cut(s)	420, 725, 1290, 1969
BstF5I	GGATG	7 cut(s)	161, 355, 958, 1075, 1327, 1770, 1807
BstKTI	GATC	6 cut(s)	23, 442, 808, 868, 1297, 1366
BstMBI	GATC	6 cut(s)	20, 439, 805, 865, 1294, 1363
BstMWI	GCNNNNNNNGC	9 cut(s)	199, 380, 389, 598, 686, 695, 846, 1721, 1932
BstNI	CCWGG	6 cut(s)	18, 222, 1302, 1492, 1672, 1878
BstNSI	RCATGY	2 cut(s)	503, 849
BstSCI	CCNGG	8 cut(s)	16, 220, 748, 1300, 1490, 1571, 1670, 1876
BstSFI	CTRYAG	3 cut(s)	713, 779, 1404
BstSLI	GKGCMC	3 cut(s)	842, 1626, 1694
BstV1I	GCAGC	6 cut(s)	613, 664, 904, 926, 1418, 1610
BstX2I	RGATCY	2 cut(s)	20, 865
BstYI	RGATCY	2 cut(s)	20, 865
BstZ17I	GTATAC	1 cut(s)	1839
BtgI	CCRYGG	4 cut(s)	420, 725, 1290, 1969
BtgZI	GCGATG	1 cut(s)	1730
BtsCI	GGATG	7 cut(s)	161, 355, 958, 1075, 1327, 1770, 1807
BtsI	GCAGTG	1 cut(s)	1722
BtsIMutI	CAGTG	4 cut(s)	1144, 1722, 1926, 1941
BveI	ACCTGC	2 cut(s)	706, 1931
Cac8I	GCNNGC	4 cut(s)	200, 501, 594, 2009
CaiI	CAGNNNCTG	1 cut(s)	920
CciI	TCATGA	2 cut(s)	460, 1261
Cfr10I	RCCGGY	1 cut(s)	1793
Cfr13I	GGNCC	8 cut(s)	381, 949, 1240, 1435, 1547, 1680, 1690, 1691
CseI	GACGC	1 cut(s)	1069
Csp6I	GTAC	3 cut(s)	1231, 1327, 1414
CviQI	GTAC	3 cut(s)	1231, 1327, 1414
DdeI	CTNAG	6 cut(s)	305, 405, 1122, 1182, 1944, 2003
DpnI	GATC	6 cut(s)	22, 441, 807, 867, 1296, 1365
DpnII	GATC	6 cut(s)	20, 439, 805, 865, 1294, 1363
EaeI	YGGCCR	4 cut(s)	196, 1100, 1488, 1879
EciI	GGCGGA	1 cut(s)	1502
Eco130I	CCWWGG	4 cut(s)	420, 725, 1290, 1686
Eco24I	GRGCYC	2 cut(s)	1269, 1694
Eco32I	GATATC	1 cut(s)	1096
Eco47I	GGWCC	2 cut(s)	1240, 1435
Eco57I	CTGAAG	1 cut(s)	201
EcoO109I	RGGNCCY	3 cut(s)	1240, 1547, 1690
EcoRI	GAATTC	2 cut(s)	338, 856
EcoRII	CCWGG	6 cut(s)	16, 220, 1300, 1490, 1670, 1876
EcoRV	GATATC	1 cut(s)	1096
EcoT14I	CCWWGG	4 cut(s)	420, 725, 1290, 1686
EcoT22I	ATGCAT	1 cut(s)	851
EcoT38I	GRGCYC	2 cut(s)	1269, 1694
ErhI	CCWWGG	4 cut(s)	420, 725, 1290, 1686
FalI	AAGNNNNNCTT	2 cut(s)	868, 900
FaqI	GGGAC	2 cut(s)	385, 1253
FauI	CCCGC	1 cut(s)	1372
FbaI	TGATCA	1 cut(s)	1363
FblI	GTMKAC	1 cut(s)	1838
Fnu4HI	GCNGC	7 cut(s)	627, 678, 915, 918, 1407, 1599, 1683
FokI	GGATG	7 cut(s)	168, 362, 945, 1082, 1334, 1777, 1814
FriOI	GRGCYC	2 cut(s)	1269, 1694
Fsp4HI	GCNGC	7 cut(s)	627, 678, 915, 918, 1407, 1599, 1683
FspBI	CTAG	3 cut(s)	699, 1605, 1814
GluI	GCNGC	7 cut(s)	627, 678, 915, 918, 1407, 1599, 1683
GsaI	CCCAGC	1 cut(s)	1379
GsuI	CTGGAG	2 cut(s)	777, 1654
HapII	CCGG	4 cut(s)	750, 1572, 1644, 1794
HgaI	GACGC	1 cut(s)	1069
HincII	GTYRAC	3 cut(s)	966, 1030, 1522
HindII	GTYRAC	3 cut(s)	966, 1030, 1522
HindIII	AAGCTT	1 cut(s)	1526
HinfI	GANTC	5 cut(s)	116, 1172, 1201, 1220, 1740
HpaI	GTTAAC	1 cut(s)	1522
HpaII	CCGG	4 cut(s)	750, 1572, 1644, 1794
HphI	GGTGA	4 cut(s)	371, 1358, 1808, 1912
Hpy188I	TCNGA	2 cut(s)	493, 898
Hpy99I	CGWCG	1 cut(s)	1470
HpyAV	CCTTC	4 cut(s)	688, 1060, 1312, 1427
HpyCH4IV	ACGT	1 cut(s)	1989
HpyF10VI	GCNNNNNNNGC	9 cut(s)	199, 380, 389, 598, 686, 695, 846, 1721, 1932
HpyF3I	CTNAG	6 cut(s)	305, 405, 1122, 1182, 1944, 2003
HpySE526I	ACGT	1 cut(s)	1989
KflI	GGGWCCC	1 cut(s)	1240
Ksp22I	TGATCA	1 cut(s)	1363
KspAI	GTTAAC	1 cut(s)	1522
Kzo9I	GATC	6 cut(s)	20, 439, 805, 865, 1294, 1363
LmnI	GCTCC	3 cut(s)	1048, 1646, 1673
Lsp1109I	GCAGC	6 cut(s)	613, 664, 904, 926, 1418, 1610
LweI	GCATC	4 cut(s)	1312, 1395, 1585, 1792
MaeI	CTAG	3 cut(s)	699, 1605, 1814
MaeII	ACGT	1 cut(s)	1989
MaeIII	GTNAC	9 cut(s)	265, 292, 445, 469, 763, 1346, 1826, 1888, 1894
MalI	GATC	6 cut(s)	22, 441, 807, 867, 1296, 1365
MbiI	CCGCTC	1 cut(s)	786
MboI	GATC	6 cut(s)	20, 439, 805, 865, 1294, 1363
MboII	GAAGA	2 cut(s)	421, 1973
MfeI	CAATTG	1 cut(s)	1053
MflI	RGATCY	2 cut(s)	20, 865
MhlI	GDGCHC	7 cut(s)	842, 927, 1166, 1269, 1309, 1626, 1694
MlsI	TGGCCA	3 cut(s)	198, 1490, 1881
MluNI	TGGCCA	3 cut(s)	198, 1490, 1881
MlyI	GAGTC	1 cut(s)	1181
MmeI	TCCRAC	4 cut(s)	88, 145, 304, 808
Mox20I	TGGCCA	3 cut(s)	198, 1490, 1881
Mph1103I	ATGCAT	1 cut(s)	851
MroXI	GAANNNNTTC	1 cut(s)	115
MscI	TGGCCA	3 cut(s)	198, 1490, 1881
MseI	TTAA	7 cut(s)	42, 254, 603, 732, 1521, 1710, 1872
MslI	CAYNNNNRTG	4 cut(s)	465, 612, 876, 1946
Msp20I	TGGCCA	3 cut(s)	198, 1490, 1881
MspA1I	CMGCKG	2 cut(s)	917, 1379
MspCI	CTTAAG	1 cut(s)	602
MspI	CCGG	4 cut(s)	750, 1572, 1644, 1794
MspR9I	CCNGG	8 cut(s)	18, 222, 750, 1302, 1492, 1573, 1672, 1878
MunI	CAATTG	1 cut(s)	1053
Mva1269I	GAATGC	1 cut(s)	1977
MvaI	CCWGG	6 cut(s)	18, 222, 1302, 1492, 1672, 1878
MwoI	GCNNNNNNNGC	9 cut(s)	199, 380, 389, 598, 686, 695, 846, 1721, 1932
NciI	CCSGG	2 cut(s)	750, 1573
NcoI	CCATGG	3 cut(s)	420, 725, 1290
NdeII	GATC	6 cut(s)	20, 439, 805, 865, 1294, 1363
NlaIV	GGNNCC	6 cut(s)	1050, 1241, 1242, 1648, 1692, 2000
NmeAIII	GCCGAG	1 cut(s)	1675
NmuCI	GTSAC	6 cut(s)	292, 469, 1346, 1826, 1888, 1894
NsiI	ATGCAT	1 cut(s)	851
NspI	RCATGY	2 cut(s)	503, 849
NspV	TTCGAA	1 cut(s)	1734
OliI	CACNNNNGTG	2 cut(s)	876, 1946
PaeI	GCATGC	1 cut(s)	503
PagI	TCATGA	2 cut(s)	460, 1261
PaqCI	CACCTGC	1 cut(s)	1931
PctI	GAATGC	1 cut(s)	1977
PdmI	GAANNNNTTC	1 cut(s)	115
PfeI	GAWTC	4 cut(s)	116, 1201, 1220, 1740
PflMI	CCANNNNNTGG	1 cut(s)	1677
PkrI	GCNGC	7 cut(s)	628, 679, 916, 919, 1408, 1600, 1684
PleI	GAGTC	1 cut(s)	1180
PpsI	GAGTC	1 cut(s)	1180
PpuMI	RGGWCCY	1 cut(s)	1240
Psp5II	RGGWCCY	1 cut(s)	1240
Psp6I	CCWGG	6 cut(s)	16, 220, 1300, 1490, 1670, 1876
PspFI	CCCAGC	1 cut(s)	1375
PspGI	CCWGG	6 cut(s)	16, 220, 1300, 1490, 1670, 1876
PspN4I	GGNNCC	6 cut(s)	1050, 1241, 1242, 1648, 1692, 2000
PspOMI	GGGCCC	1 cut(s)	1690
PspPI	GGNCC	8 cut(s)	381, 949, 1240, 1435, 1547, 1680, 1690, 1691
PspPPI	RGGWCCY	1 cut(s)	1240
PstI	CTGCAG	2 cut(s)	717, 1408
PstNI	CAGNNNCTG	1 cut(s)	920
PsuI	RGATCY	2 cut(s)	20, 865
PvuII	CAGCTG	1 cut(s)	917
RsaI	GTAC	3 cut(s)	1232, 1328, 1415
RsaNI	GTAC	3 cut(s)	1231, 1327, 1414
RseI	CAYNNNNRTG	4 cut(s)	465, 612, 876, 1946
SaqAI	TTAA	7 cut(s)	42, 254, 603, 732, 1521, 1710, 1872
SatI	GCNGC	7 cut(s)	627, 678, 915, 918, 1407, 1599, 1683
Sau3AI	GATC	6 cut(s)	20, 439, 805, 865, 1294, 1363
Sau96I	GGNCC	8 cut(s)	381, 949, 1240, 1435, 1547, 1680, 1690, 1691
SchI	GAGTC	1 cut(s)	1181
ScrFI	CCNGG	8 cut(s)	18, 222, 750, 1302, 1492, 1573, 1672, 1878
SduI	GDGCHC	7 cut(s)	842, 927, 1166, 1269, 1309, 1626, 1694
SfaNI	GCATC	4 cut(s)	1312, 1395, 1585, 1792
SfcI	CTRYAG	3 cut(s)	713, 779, 1404
SfuI	TTCGAA	1 cut(s)	1734
SinI	GGWCC	2 cut(s)	1240, 1435
SmiMI	CAYNNNNRTG	4 cut(s)	465, 612, 876, 1946
SmlI	CTYRAG	2 cut(s)	602, 1421
SmoI	CTYRAG	2 cut(s)	602, 1421
SphI	GCATGC	1 cut(s)	503
SsiI	CCGC	5 cut(s)	786, 1379, 1438, 1513, 1683
SspI	AATATT	2 cut(s)	773, 823
SspMI	CTAG	3 cut(s)	699, 1605, 1814
StyD4I	CCNGG	8 cut(s)	16, 220, 748, 1300, 1490, 1571, 1670, 1876
StyI	CCWWGG	4 cut(s)	420, 725, 1290, 1686
TaiI	ACGT	1 cut(s)	1992
TaqI	TCGA	4 cut(s)	174, 438, 808, 1734
TatI	WGTACW	1 cut(s)	1230
TauI	GCSGC	1 cut(s)	1685
TfiI	GAWTC	4 cut(s)	116, 1201, 1220, 1740
Tru1I	TTAA	7 cut(s)	42, 254, 603, 732, 1521, 1710, 1872
Tru9I	TTAA	7 cut(s)	42, 254, 603, 732, 1521, 1710, 1872
TscAI	CASTG	4 cut(s)	1144, 1722, 1933, 1948
TseFI	GTSAC	6 cut(s)	292, 469, 1346, 1826, 1888, 1894
TseI	GCWGC	6 cut(s)	626, 677, 914, 917, 1406, 1598
Tsp45I	GTSAC	6 cut(s)	292, 469, 1346, 1826, 1888, 1894
TspDTI	ATGAA	5 cut(s)	23, 500, 947, 1250, 1494
TspGWI	ACGGA	3 cut(s)	951, 1916, 1986
TspRI	CASTG	4 cut(s)	1144, 1722, 1933, 1948
Van91I	CCANNNNNTGG	1 cut(s)	1677
Vha464I	CTTAAG	1 cut(s)	602
VneI	GTGCAC	1 cut(s)	838
VpaK11BI	GGWCC	2 cut(s)	1240, 1435
XapI	RAATTY	5 cut(s)	329, 338, 856, 940, 1339
XceI	RCATGY	2 cut(s)	503, 849
XmiI	GTMKAC	1 cut(s)	1838
XmnI	GAANNNNTTC	1 cut(s)	115
XspI	CTAG	3 cut(s)	699, 1605, 1814
Zsp2I	ATGCAT	1 cut(s)	851

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.