pycom17g26510
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
24798977 .. 24801877
2901 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1410 bp
ATGGAAGGGCAAAGAAGCCGGATCCTTCCTTTAAATCTTATAGACGTGCACTGTTTTCCGCGCCACAAATCAAGAAAAATACAAAAACGAGAGAGAGAGAGAGAGAGAGAGACTTCAAAGCTTCAATGCGAGATTCTTCCATCTCCACTGACTTGTATTGGGGATAGGGTTAGGGTTAGGTTTGCCCGTTTGAAATTTATCTGCAAACAGATGGAGTCGGAGGAAGAGTACAGAAGAAAGGAGCGCATGGCATTGTTGGTGATTGTGGTGCTTGCTTCACTGTCCGTCGCTTCATTACTCGTCGCCTTCAGCTACTACTGCTACGTCCGCAACAAGGTCGCCAAGCGCCTCCAGAACCACAAGGGGTCTGACCCTGAGAACAAAGGTGGTTTTTCAAATTTGCAAGTTGCGTCCAATAAAGGACTTCAGGTCTTCACATTCAAGCAACTACATTCCGCAACTGGTGGTTTCAGCAAGTCAAATGTCGTTGGCAAAGGCAGCTTTGGGTTAGTGTACCGAGGTGTTCTCCATGATGGGAGGAAAGTTGCGGTTAAGTTTATGGACGAAGCAGGAAAGCAGGGAGCAGAGGAATTCAAAATGGAGGTGGAATTGCTAAGTAGGCTGTGCTCTCCATATTTGCTGGCACTACTTGGGTATTGCTCAGATAACAGTAGTCATAAGTTGCTGGTGTATGAGTTCATGGCAAACGGTGGTTTGCAGGAACATTTGTATCCTGTCAATGGTTCTAACGCTGTCTCCTTTAAGTTAGACTGGGAAACCCGGTTGAGAATAGCTCTTGAAGCTGCGAAGGGTTTGGAGTATCTCCATGAACATGTCAGTCCTCCTGTGATTCACAGAGATTTTAAGAGCAGCAACATTCTCTTGGATAAAAACTTTCATGCCAAAGTTTCTGATTTCGGATTGGCCAAGCTGCTTGGATCTGATAAAGCTGGTGATTACGTTTCCACCAGAGTATTGGGTACACAGGGATATATTGCCCCCGAGTATGCATTGACAGGGCATTTGACAACTAAATCAGATGTTTACAGCTATGGGGTTGTGCTTTTGGAGTTGCTTACAGGCAGAGTTCCAGTTGATATGAAGAGACCTTCTGGCGAGGGTGTTCTTGTTTCTTGGGCTTTGCCCCAGCTGACAGATAGGGAGCAGGTTGTAGAAATCATGGATCCTGCATTGGAGGGTCAGTATTCAATGAAGGAGGTCATTCAGGTGGCAGCAATTGCTGCAATGTGCGTGCAACCAGAAGCCGATTACAGGCCGCTGATGGCAGATGTTGTGCAATCACTGGTACCACTTGTGAAGATTCACAGGTCAACTTCGAAGGTAGGCAGCTCTTCTAGTTTTCATGCTACAACGTCACCTACGGTGCAGATTAGTAAAGCAAGTCTATGA

Protein Analysis

470

Amino Acids

52.27

Weight (kDa)

9.21

Isoelectric Point (pI)

38.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 158 - 369 7.7e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 160 - 435 5.2e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012244)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1156
Acc65I GGTACC 1 cut(s) 1306
AccB1I GGYRCC 1 cut(s) 1306
AccII CGCG 1 cut(s) 61
AciI CCGC 5 cut(s) 59, 328, 456, 548, 1277
AclWI GGATC 5 cut(s) 16, 29, 946, 1178, 1191
AcoI YGGCCR 1 cut(s) 924
AcsI RAATTY 3 cut(s) 194, 397, 590
AcuI CTGAAG 2 cut(s) 292, 410
AfaI GTAC 4 cut(s) 230, 515, 982, 1308
AfiI CCNNNNNNNGG 3 cut(s) 334, 740, 1272
AflIII ACRYGT 1 cut(s) 832
AgsI TTSAA 8 cut(s) 117, 125, 193, 396, 442, 595, 800, 1209
AhdI GACNNNNNGTC 1 cut(s) 428
AjiI CACGTC 1 cut(s) 46
Alw21I GWGCWC 2 cut(s) 51, 629
Alw26I GTCTC 3 cut(s) 104, 760, 1099
Alw44I GTGCAC 1 cut(s) 47
AlwI GGATC 5 cut(s) 16, 29, 946, 1178, 1191
Ama87I CYCGRG 1 cut(s) 1001
AoxI GGCC 2 cut(s) 924, 1274
ApaLI GTGCAC 1 cut(s) 47
ApeKI GCWGC 7 cut(s) 498, 803, 870, 931, 1232, 1241, 1347
ApoI RAATTY 3 cut(s) 194, 397, 590
ArsI GACNNNNNNTTYG 2 cut(s) 1006, 1038
Asp718I GGTACC 1 cut(s) 1306
AspLEI GCGC 3 cut(s) 63, 246, 348
AsuC2I CCSGG 1 cut(s) 781
AsuHPI GGTGA 3 cut(s) 271, 965, 1368
AsuII TTCGAA 1 cut(s) 1337
AvaI CYCGRG 1 cut(s) 1001
BaeGI GKGCMC 1 cut(s) 51
BaeI ACNNNNGTAYC 2 cut(s) 713, 746
BalI TGGCCA 1 cut(s) 926
BamHI GGATCC 2 cut(s) 21, 1183
BanI GGYRCC 1 cut(s) 1306
BbsI GAAGAC 1 cut(s) 424
Bbv12I GWGCWC 2 cut(s) 51, 629
BbvI GCAGC 7 cut(s) 510, 790, 882, 918, 1228, 1244, 1359
BccI CCATC 4 cut(s) 148, 205, 527, 1276
BcgI CGANNNNNNTGC 2 cut(s) 319, 353
BciVI GTATCC 1 cut(s) 741
BcnI CCSGG 1 cut(s) 781
BcoDI GTCTC 3 cut(s) 104, 760, 1099
BfaI CTAG 1 cut(s) 1356
BfoI RGCGCY 1 cut(s) 349
BfuAI ACCTGC 1 cut(s) 1156
BfuI GTATCC 1 cut(s) 741
BisI GCNGC 8 cut(s) 499, 804, 871, 932, 1233, 1242, 1277, 1348
BlsI GCNGC 8 cut(s) 500, 805, 872, 933, 1234, 1243, 1278, 1349
Bme1390I CCNGG 1 cut(s) 781
BmeRI GACNNNNNGTC 1 cut(s) 428
BmeT110I CYCGRG 1 cut(s) 1001
BmgBI CACGTC 1 cut(s) 46
BmiI GGNNCC 3 cut(s) 23, 1185, 1308
BmrFI CCNGG 1 cut(s) 781
BmrI ACTGGG 1 cut(s) 781
BmuI ACTGGG 1 cut(s) 781
BpiI GAAGAC 1 cut(s) 424
BplI GAGNNNNNCTC 4 cut(s) 510, 542, 778, 810
BpmI CTGGAG 1 cut(s) 335
Bpu14I TTCGAA 1 cut(s) 1337
BpuMI CCSGG 1 cut(s) 781
BsaI GGTCTC 1 cut(s) 1099
BsaJI CCNNGG 1 cut(s) 517
BsaXI ACNNNNNCTCC 6 cut(s) 212, 242, 740, 770, 1187, 1217
Bsc4I CCNNNNNNNGG 3 cut(s) 334, 740, 1272
Bse1I ACTGG 4 cut(s) 466, 776, 1091, 1308
Bse3DI GCAATG 1 cut(s) 1251
BseDI CCNNGG 1 cut(s) 517
BseLI CCNNNNNNNGG 3 cut(s) 334, 740, 1272
BseMI GCAATG 1 cut(s) 1251
BseMII CTCAG 2 cut(s) 366, 675
BseNI ACTGG 4 cut(s) 466, 776, 1091, 1308
BseSI GKGCMC 1 cut(s) 51
BseXI GCAGC 7 cut(s) 510, 790, 882, 918, 1228, 1244, 1359
BseYI CCCAGC 1 cut(s) 1146
BsgI GTGCAG 1 cut(s) 1406
Bsh1236I CGCG 1 cut(s) 61
BshFI GGCC 2 cut(s) 926, 1276
BshNI GGYRCC 1 cut(s) 1306
BsiHKAI GWGCWC 2 cut(s) 51, 629
BsiHKCI CYCGRG 1 cut(s) 1001
BsiSI CCGG 2 cut(s) 19, 781
BslI CCNNNNNNNGG 3 cut(s) 334, 740, 1272
BsmAI GTCTC 3 cut(s) 104, 760, 1099
BsnI GGCC 2 cut(s) 926, 1276
Bso31I GGTCTC 1 cut(s) 1099
BsoBI CYCGRG 1 cut(s) 1001
Bsp119I TTCGAA 1 cut(s) 1337
Bsp1286I GDGCHC 2 cut(s) 51, 629
Bsp143I GATC 3 cut(s) 21, 938, 1183
BspACI CCGC 5 cut(s) 59, 328, 456, 548, 1277
BspANI GGCC 2 cut(s) 926, 1276
BspCNI CTCAG 2 cut(s) 367, 674
BspFNI CGCG 1 cut(s) 61
BspLI GGNNCC 3 cut(s) 23, 1185, 1308
BspMI ACCTGC 1 cut(s) 1156
BspPI GGATC 5 cut(s) 16, 29, 946, 1178, 1191
BspQI GCTCTTC 1 cut(s) 1357
BspT104I TTCGAA 1 cut(s) 1337
BspT107I GGYRCC 1 cut(s) 1306
BspTNI GGTCTC 1 cut(s) 1099
BsrDI GCAATG 1 cut(s) 1251
BsrI ACTGG 4 cut(s) 466, 776, 1091, 1308
BssECI CCNNGG 1 cut(s) 517
BssMI GATC 3 cut(s) 21, 938, 1183
Bst4CI ACNGT 5 cut(s) 53, 282, 671, 710, 1384
Bst6I CTCTTC 3 cut(s) 219, 1097, 1357
BstAPI GCANNNNNTGC 2 cut(s) 1238, 1241
BstBI TTCGAA 1 cut(s) 1337
BstC8I GCNNGC 3 cut(s) 273, 642, 1253
BstDEI CTNAG 3 cut(s) 375, 614, 661
BstFNI CGCG 1 cut(s) 61
BstH2I RGCGCY 1 cut(s) 349
BstHHI GCGC 3 cut(s) 63, 246, 348
BstKTI GATC 3 cut(s) 24, 941, 1186
BstMAI GTCTC 3 cut(s) 104, 760, 1099
BstMBI GATC 3 cut(s) 21, 938, 1183
BstMWI GCNNNNNNNGC 7 cut(s) 318, 327, 498, 619, 800, 1238, 1241
BstNSI RCATGY 1 cut(s) 836
BstSCI CCNGG 1 cut(s) 779
BstSLI GKGCMC 1 cut(s) 51
BstUI CGCG 1 cut(s) 61
BstV1I GCAGC 7 cut(s) 510, 790, 882, 918, 1228, 1244, 1359
BstV2I GAAGAC 1 cut(s) 424
BstX2I RGATCY 3 cut(s) 21, 938, 1183
BstXI CCANNNNNNTGG 1 cut(s) 976
BstYI RGATCY 3 cut(s) 21, 938, 1183
BsuI GTATCC 1 cut(s) 741
BsuRI GGCC 2 cut(s) 926, 1276
BtrI CACGTC 1 cut(s) 46
BtsIMutI CAGTG 4 cut(s) 49, 146, 278, 1301
BveI ACCTGC 1 cut(s) 1156
Cac8I GCNNGC 3 cut(s) 273, 642, 1253
CfoI GCGC 3 cut(s) 63, 246, 348
CseI GACGC 1 cut(s) 399
Csp6I GTAC 4 cut(s) 229, 514, 981, 1307
CviAII CATG 8 cut(s) 247, 530, 700, 827, 833, 899, 1180, 1364
CviQI GTAC 4 cut(s) 229, 514, 981, 1307
DdeI CTNAG 3 cut(s) 375, 614, 661
DpnI GATC 3 cut(s) 23, 940, 1185
DpnII GATC 3 cut(s) 21, 938, 1183
DraI TTTAAA 1 cut(s) 33
DriI GACNNNNNGTC 1 cut(s) 428
EaeI YGGCCR 1 cut(s) 924
Eam1104I CTCTTC 3 cut(s) 219, 1097, 1357
Eam1105I GACNNNNNGTC 1 cut(s) 428
EarI CTCTTC 3 cut(s) 219, 1097, 1357
Eco31I GGTCTC 1 cut(s) 1099
Eco57I CTGAAG 2 cut(s) 292, 410
Eco88I CYCGRG 1 cut(s) 1001
EcoRI GAATTC 1 cut(s) 590
EcoT22I ATGCAT 1 cut(s) 1012
FaeI CATG 8 cut(s) 250, 533, 703, 830, 836, 902, 1183, 1367
FatI CATG 8 cut(s) 246, 529, 699, 826, 832, 898, 1179, 1363
Fnu4HI GCNGC 8 cut(s) 499, 804, 871, 932, 1233, 1242, 1277, 1348
Fsp4HI GCNGC 8 cut(s) 499, 804, 871, 932, 1233, 1242, 1277, 1348
FspBI CTAG 1 cut(s) 1356
GlaI GCGC 3 cut(s) 62, 245, 347
GluI GCNGC 8 cut(s) 499, 804, 871, 932, 1233, 1242, 1277, 1348
GsaI CCCAGC 1 cut(s) 1150
GsuI CTGGAG 1 cut(s) 335
HaeII RGCGCY 1 cut(s) 349
HaeIII GGCC 2 cut(s) 926, 1276
HapII CCGG 2 cut(s) 19, 781
HgaI GACGC 1 cut(s) 399
HhaI GCGC 3 cut(s) 63, 246, 348
Hin1II CATG 8 cut(s) 250, 533, 703, 830, 836, 902, 1183, 1367
Hin6I GCGC 3 cut(s) 61, 244, 346
HinP1I GCGC 3 cut(s) 61, 244, 346
HincII GTYRAC 1 cut(s) 1332
HindII GTYRAC 1 cut(s) 1332
HindIII AAGCTT 1 cut(s) 119
HinfI GANTC 4 cut(s) 133, 215, 850, 1321
HpaII CCGG 2 cut(s) 19, 781
HphI GGTGA 3 cut(s) 271, 965, 1368
Hpy166II GTNNAC 5 cut(s) 49, 514, 983, 1045, 1332
Hpy188I TCNGA 7 cut(s) 220, 370, 664, 913, 920, 943, 1039
Hpy188III TCNNGA 3 cut(s) 72, 352, 797
Hpy8I GTNNAC 5 cut(s) 49, 514, 983, 1045, 1332
Hpy99I CGWCG 2 cut(s) 290, 305
HpyAV CCTTC 6 cut(s) 35, 316, 802, 1119, 1207, 1333
HpyCH4III ACNGT 5 cut(s) 53, 282, 671, 710, 1384
HpyCH4IV ACGT 4 cut(s) 45, 324, 960, 1373
HpyF10VI GCNNNNNNNGC 7 cut(s) 318, 327, 498, 619, 800, 1238, 1241
HpyF3I CTNAG 3 cut(s) 375, 614, 661
HpySE526I ACGT 4 cut(s) 45, 324, 960, 1373
Hsp92II CATG 8 cut(s) 250, 533, 703, 830, 836, 902, 1183, 1367
HspAI GCGC 3 cut(s) 61, 244, 346
KpnI GGTACC 1 cut(s) 1310
Kzo9I GATC 3 cut(s) 21, 938, 1183
LguI GCTCTTC 1 cut(s) 1357
LmnI GCTCC 3 cut(s) 241, 581, 1162
Lsp1109I GCAGC 7 cut(s) 510, 790, 882, 918, 1228, 1244, 1359
MaeI CTAG 1 cut(s) 1356
MaeII ACGT 4 cut(s) 45, 324, 960, 1373
MaeIII GTNAC 1 cut(s) 1374
MalI GATC 3 cut(s) 23, 940, 1185
MboI GATC 3 cut(s) 21, 938, 1183
MboII GAAGA 7 cut(s) 128, 236, 246, 424, 1114, 1330, 1344
MfeI CAATTG 1 cut(s) 1236
MflI RGATCY 3 cut(s) 21, 938, 1183
MhlI GDGCHC 2 cut(s) 51, 629
MlsI TGGCCA 1 cut(s) 926
MluCI AATT 5 cut(s) 194, 397, 590, 608, 1236
MluNI TGGCCA 1 cut(s) 926
MlyI GAGTC 1 cut(s) 224
MmeI TCCRAC 1 cut(s) 198
Mox20I TGGCCA 1 cut(s) 926
Mph1103I ATGCAT 1 cut(s) 1012
MscI TGGCCA 1 cut(s) 926
MseI TTAA 4 cut(s) 32, 552, 762, 864
MslI CAYNNNNRTG 2 cut(s) 831, 1226
Msp20I TGGCCA 1 cut(s) 926
MspA1I CMGCKG 2 cut(s) 1150, 1279
MspI CCGG 2 cut(s) 19, 781
MspR9I CCNGG 1 cut(s) 781
MunI CAATTG 1 cut(s) 1236
MvnI CGCG 1 cut(s) 61
MwoI GCNNNNNNNGC 7 cut(s) 318, 327, 498, 619, 800, 1238, 1241
NciI CCSGG 1 cut(s) 781
NdeII GATC 3 cut(s) 21, 938, 1183
NlaIII CATG 8 cut(s) 250, 533, 703, 830, 836, 902, 1183, 1367
NlaIV GGNNCC 3 cut(s) 23, 1185, 1308
NmuCI GTSAC 1 cut(s) 1374
NsiI ATGCAT 1 cut(s) 1012
NspI RCATGY 1 cut(s) 836
NspV TTCGAA 1 cut(s) 1337
PciI ACATGT 1 cut(s) 832
PciSI GCTCTTC 1 cut(s) 1357
PfeI GAWTC 3 cut(s) 133, 850, 1321
PkrI GCNGC 8 cut(s) 500, 805, 872, 933, 1234, 1243, 1278, 1349
PleI GAGTC 1 cut(s) 223
PpsI GAGTC 1 cut(s) 223
PscI ACATGT 1 cut(s) 832
PspFI CCCAGC 1 cut(s) 1146
PspN4I GGNNCC 3 cut(s) 23, 1185, 1308
PsuI RGATCY 3 cut(s) 21, 938, 1183
PvuII CAGCTG 1 cut(s) 1150
RsaI GTAC 4 cut(s) 230, 515, 982, 1308
RsaNI GTAC 4 cut(s) 229, 514, 981, 1307
RseI CAYNNNNRTG 2 cut(s) 831, 1226
SapI GCTCTTC 1 cut(s) 1357
SaqAI TTAA 4 cut(s) 32, 552, 762, 864
SatI GCNGC 8 cut(s) 499, 804, 871, 932, 1233, 1242, 1277, 1348
Sau3AI GATC 3 cut(s) 21, 938, 1183
SchI GAGTC 1 cut(s) 224
ScrFI CCNGG 1 cut(s) 781
SduI GDGCHC 2 cut(s) 51, 629
SfuI TTCGAA 1 cut(s) 1337
SmiMI CAYNNNNRTG 2 cut(s) 831, 1226
Sse9I AATT 5 cut(s) 194, 397, 590, 608, 1236
SsiI CCGC 5 cut(s) 59, 328, 456, 548, 1277
SspMI CTAG 1 cut(s) 1356
StyD4I CCNGG 1 cut(s) 779
TaaI ACNGT 5 cut(s) 53, 282, 671, 710, 1384
TaiI ACGT 4 cut(s) 48, 327, 963, 1376
TaqI TCGA 1 cut(s) 1337
TasI AATT 5 cut(s) 194, 397, 590, 608, 1236
TatI WGTACW 1 cut(s) 228
TauI GCSGC 1 cut(s) 1279
TfiI GAWTC 3 cut(s) 133, 850, 1321
Tru1I TTAA 4 cut(s) 32, 552, 762, 864
Tru9I TTAA 4 cut(s) 32, 552, 762, 864
TscAI CASTG 4 cut(s) 56, 153, 285, 1308
TseFI GTSAC 1 cut(s) 1374
TseI GCWGC 7 cut(s) 498, 803, 870, 931, 1232, 1241, 1347
Tsp45I GTSAC 1 cut(s) 1374
TspDTI ATGAA 7 cut(s) 282, 688, 843, 887, 1115, 1226, 1352
TspGWI ACGGA 1 cut(s) 274
TspRI CASTG 4 cut(s) 56, 153, 285, 1308
VneI GTGCAC 1 cut(s) 47
XapI RAATTY 3 cut(s) 194, 397, 590
XceI RCATGY 1 cut(s) 836
XcmI CCANNNNNNNNNTGG 1 cut(s) 973
XspI CTAG 1 cut(s) 1356
Zsp2I ATGCAT 1 cut(s) 1012
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.