Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

tig00000348

Orthogroup ID

OG0010084

Physical Location & Seq

Genomic Coordinates Forward (+)

79217 .. 82492

Gene Structure 3276 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2298 bp

ATGTGCCAGCTGGCCATCGTCGTCGTCGACATGAATCGGTGCGCTTCATCGCCTCCCCATCTCTGCGTCTTTACGCCGTGCCAGTTCTCCGGCAGCAGCACCACCGCCGTCAAGTTCTTCAGGTTCGGGTTCGAGTTCCAGAGGAAAGAGCGATTCAGGCGGCGGCTTAAGTTCGTTGTCAGTGCAGAGCTTTCGAAGCCATTCGCTCTCAGCTTCGGCTTGGACTCTCAGACCTTTCGGCCTCATGATCCTTCGCAATTACCTAGAATTGGTCCTATTCCTGGAGATATTGCAGAAATTGAGGCATACTGTAGAATCTTTAGATGTGCTGAACGGCTTCATAGTGCATTGATGGACACATTATGCAATCCAGTAACAGGTGAATGTAGTGTTTATTATGATTACCCATCAGAGGAAAAACCACTTTTGGAGGATAAAATTGTCTCTGTGATTGGGTGTATGGTATCCCTGTTGAACAAAGGAAGGGAGGATGTGCTTTCTGGTAGATCGTCCATTCGCCTTGCAGATTTAAGTGTAATGGAGGATGAGCTTCCTCCACTTGCCATTTTCAGGAGCGAGGTGAAAAGGTGTTGCGAGAGCTTGCACGTTGCTCTTGAAAACTGGTTGGTTCCTGGGGATGATCGAAGCTTGGATGTATGGAGGAAACTTCAGAGACTGAAGAATGTCTGTTATGATTCTGGTTTTCCCCGAGGGGAGGATTATCCTTGCCATACACTTTTTGCGAATTGGGCTCCTGTTTACTTATCCTCTTGTAAAGAGGACATTAGGTCCATAGATTCGGAGATAGCTTTTTGGAGGGGTGGCCAGGTAACAGAAGAAGGTCTGAAGTGGTTACTAGAGAAAGGATATAAAACTATTGTTGACCTTAGGGCAGAGACTGTAAAAGACAAAGCTTATCATTCAGCCATAGATGATGCTATTGCATCCGGGAAAGTTGAATTGGTCAAAATTCCAGTTGAAGTTGGGACTGCACCTTCAATGGAGCAGGTTGAGAAATTTGCATCTTTGGTTTCAGATTGCAGCAAGAAGCCGATCTATCTTCATAGTAAGGAAGGAGCGTTGAGAACTTCTGCCATGGTTTCTAGATGGAGGCAATACTCGTCACGTTATAATGTGCAGTTTGTCTCCAAGCAGTCAAGCGCTATCAACGATGTGTTACTACGAAATACAAATGGGGCAGGCGAAGTGCTGGAGCCTTCCACTTCTAAGAAAAGGTCTATCCCGGGAAAGAACAAGCCACTGCAAGGGGAACTGGACAAAACTTATGGTTTAAATGGTGTATTTCAAAAGGATGTGTCTTCAGATAGGGATGAAACAAATCAGAGCTCAAATGGGACATATAACAGCCTTATGTCTGTCCAAGGCATGACATCAGTAGAACCAGATAAAAATGGGGAAGGAAATATGATGAACTTTTGCAGGGAAGTTGAACCCCTGAATGCCCAAGTTCCTCCTTGTAATGTTTTCTCTAGAAAAGAAATGTCCAGGTTTCTGGGGAGAAAAAGCATCTCACCTCACTCCTATTTTAATCATCATTTAAAAAGGTTGGCTACATTACCAATTTCCAGAGGTATCAATATTAAAACAATGCAGAGAGGCGGTACCAATTCAGCACCCGAGCTTGTGGTGGTACAAAATTCATATGGGCCACCTTACAGAAAGGATCTGTCTCCAGAAGTCCAGACCTCTACTTCTGGAAATGGGAAGTATTTGACTAGTGTTAATTCTGGTTCTGTTCGTCCAGTTGTGAACGGATTTGATGAAGTGAATGAAATTGCAAGTAATGTGTCTACTACTCCGAGTAGTAGTTATGATGAGAGTGTCTTACCTAAAGCAGTAAATGAGGATAGGAAGAGTAACGGTGGAGCCACCTTAGCTTCAGGAGACGATGACCTGGGGTCAATTGAAGGAAATATGTGCGCTTCTGCAACTGGTGTTGTAAGGGTGCAGTCAAGAAAGAAAGCTGAGATGTTTTTAGTTCGAACAGATGGATTCTCTTGTAGCCGAGAAAAGGTGACGGAATCCTCCTTGGCCTTCACTCATCCAAGTACCCAGCAGCAAATGCTTATGTGGAAATCCTCACCAAAGACAGTATTAGTGTTGAAGAAGCTAGGGCAAGAACTCATGCAACAAGCTAAAGAGGTACCATCTGAGAATCTAGTATCTGTAAATATTCTACTCATATTTAAAACCTACTATCTGTTTTTAGATGATACTTTCCATTTTTTACTTGCAATGTGGTCTAATGATAGAACTGGTGTCAGTCAGAGTTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00760 ko01100 map00760 map01100

Pfam Domains

Protein Families

NAD_kinase

Protein Analysis

766

Amino Acids

85.23

Weight (kDa)

8.13

Isoelectric Point (pI)

40.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PTP-NADK	PF22741	242 - 380	2.9e-63	DSP-PTPase phosphatase fused to NAD+ Kinase
Tc-R-P	PF22785	276 - 370	1.8e-10	Polymorphic toxin system, DSP-PTPase phosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010084)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21640 AT1G21640
fragaria_vesca	FvH4_2g27820 FvH4_2g27820
malus_domestica	MD08G1160800.v1.1
prunus_persica	Prupe.1G489900_v2.0.a1 Prupe.1G489900_v2.0.a1 Prupe.1G489900_v2.0.a1
pyrus_communis	pycom348g00070
rosa_chinensis	RchiOBHm_Chr6g0296671
rosa_laevigata	RLG00000011671
rosa_multiflora	Rmu_sc0001741.1_g000009
rosa_roxburghii	Rroxscaffold_7G00171270
rosa_rugosa	Rorug06G0264100 Rorug06G0264100
rosa_samantha	Rh6AG375900 Rh6BG384200 Rh6CG389300 Rh6DG376700
rosa_wichuraiana	Rw6G032770 Rw6G032860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1131
Acc36I	ACCTGC	1 cut(s)	997
Acc65I	GGTACC	2 cut(s)	1622, 2164
AccB1I	GGYRCC	2 cut(s)	1622, 2164
AccI	GTMKAC	2 cut(s)	27, 1811
AciI	CCGC	4 cut(s)	105, 160, 163, 1620
AclWI	GGATC	2 cut(s)	242, 1692
AcoI	YGGCCR	2 cut(s)	12, 823
AcsI	RAATTY	3 cut(s)	969, 1016, 1657
AcuI	CTGAAG	6 cut(s)	103, 653, 698, 866, 1305, 1884
AfaI	GTAC	4 cut(s)	1624, 1653, 2071, 2166
AfeI	AGCGCT	1 cut(s)	1162
AfiI	CCNNNNNNNGG	8 cut(s)	269, 281, 377, 412, 570, 715, 1265, 2032
AflII	CTTAAG	1 cut(s)	167
AgsI	TTSAA	9 cut(s)	475, 617, 959, 980, 999, 1307, 1451, 1928, 2125
AhdI	GACNNNNNGTC	2 cut(s)	787, 1918
AhlI	ACTAGT	1 cut(s)	1736
AjnI	CCWGG	5 cut(s)	280, 631, 825, 1505, 1914
AjuI	GAANNNNNNNTTGG	2 cut(s)	944, 976
Alw21I	GWGCWC	1 cut(s)	1349
Alw26I	GTCTC	6 cut(s)	448, 667, 890, 1150, 1695, 1899
AlwI	GGATC	2 cut(s)	242, 1692
AlwNI	CAGNNNCTG	2 cut(s)	676, 899
Ama87I	CYCGRG	3 cut(s)	708, 1243, 1637
Aor51HI	AGCGCT	1 cut(s)	1162
AoxI	GGCC	5 cut(s)	12, 239, 823, 1667, 2052
ApeKI	GCWGC	4 cut(s)	93, 96, 1041, 2077
ApoI	RAATTY	3 cut(s)	969, 1016, 1657
Asp700I	GAANNNNTTC	2 cut(s)	200, 336
Asp718I	GGTACC	2 cut(s)	1622, 2164
AspLEI	GCGC	3 cut(s)	44, 1163, 1943
AspS9I	GGNCC	3 cut(s)	272, 789, 1667
AsuC2I	CCSGG	3 cut(s)	949, 1244, 1245
AsuHPI	GGTGA	5 cut(s)	392, 592, 1524, 2047, 2094
AsuII	TTCGAA	2 cut(s)	194, 2002
AvaI	CYCGRG	3 cut(s)	708, 1243, 1637
AvaII	GGWCC	2 cut(s)	272, 789
AxyI	CCTNAGG	1 cut(s)	887
BalI	TGGCCA	2 cut(s)	14, 825
BanI	GGYRCC	2 cut(s)	1622, 2164
BanII	GRGCYC	2 cut(s)	754, 1349
BbsI	GAAGAC	1 cut(s)	1311
Bbv12I	GWGCWC	1 cut(s)	1349
BbvI	GCAGC	4 cut(s)	105, 108, 1053, 2089
BccI	CCATC	7 cut(s)	23, 66, 346, 415, 1101, 2003, 2176
BceAI	ACGGC	3 cut(s)	61, 92, 350
BcgI	CGANNNNNNTGC	2 cut(s)	174, 208
BciT130I	CCWGG	5 cut(s)	282, 633, 827, 1507, 1916
BciVI	GTATCC	1 cut(s)	475
BcnI	CCSGG	3 cut(s)	949, 1244, 1245
BcoDI	GTCTC	6 cut(s)	448, 667, 890, 1150, 1695, 1899
BcuI	ACTAGT	1 cut(s)	1736
BfaI	CTAG	7 cut(s)	264, 857, 1104, 1491, 1737, 2132, 2180
BfmI	CTRYAG	1 cut(s)	310
BfoI	RGCGCY	1 cut(s)	1164
BfrI	CTTAAG	1 cut(s)	167
BfuAI	ACCTGC	1 cut(s)	997
BfuI	GTATCC	1 cut(s)	475
BisI	GCNGC	6 cut(s)	94, 97, 161, 164, 1042, 2078
BlsI	GCNGC	6 cut(s)	95, 98, 162, 165, 1043, 2079
Bme1390I	CCNGG	8 cut(s)	282, 633, 827, 949, 1244, 1245, 1507, 1916
Bme18I	GGWCC	2 cut(s)	272, 789
BmeRI	GACNNNNNGTC	2 cut(s)	787, 1918
BmeT110I	CYCGRG	3 cut(s)	708, 1243, 1637
BmgT120I	GGNCC	3 cut(s)	272, 789, 1667
BmiI	GGNNCC	6 cut(s)	630, 753, 1215, 1624, 1888, 2166
BmrFI	CCNGG	8 cut(s)	282, 633, 827, 949, 1244, 1245, 1507, 1916
BmsI	GCATC	4 cut(s)	925, 953, 1031, 1536
BpiI	GAAGAC	1 cut(s)	1311
BpmI	CTGGAG	3 cut(s)	303, 1232, 1677
Bpu10I	CCTNAGC	1 cut(s)	1894
Bpu14I	TTCGAA	2 cut(s)	194, 2002
BpuMI	CCSGG	3 cut(s)	949, 1244, 1245
BsaJI	CCNNGG	7 cut(s)	632, 709, 1095, 1243, 1381, 1915, 2049
Bsc4I	CCNNNNNNNGG	8 cut(s)	269, 281, 377, 412, 570, 715, 1265, 2032
Bse1I	ACTGG	8 cut(s)	82, 371, 626, 974, 1278, 1763, 1957, 2281
Bse21I	CCTNAGG	1 cut(s)	887
Bse3DI	GCAATG	1 cut(s)	2262
BseBI	CCWGG	5 cut(s)	282, 633, 827, 1507, 1916
BseDI	CCNNGG	7 cut(s)	632, 709, 1095, 1243, 1381, 1915, 2049
BseGI	GGATG	8 cut(s)	496, 550, 643, 658, 944, 1318, 1336, 2062
BseLI	CCNNNNNNNGG	8 cut(s)	269, 281, 377, 412, 570, 715, 1265, 2032
BseMI	GCAATG	1 cut(s)	2262
BseMII	CTCAG	4 cut(s)	223, 242, 1977, 2163
BseNI	ACTGG	8 cut(s)	82, 371, 626, 974, 1278, 1763, 1957, 2281
BseXI	GCAGC	4 cut(s)	105, 108, 1053, 2089
BseYI	CCCAGC	1 cut(s)	2073
BsgI	GTGCAG	4 cut(s)	204, 975, 1157, 1988
BshFI	GGCC	5 cut(s)	14, 241, 825, 1669, 2054
BshNI	GGYRCC	2 cut(s)	1622, 2164
BsiHKAI	GWGCWC	1 cut(s)	1349
BsiHKCI	CYCGRG	3 cut(s)	708, 1243, 1637
BsiSI	CCGG	3 cut(s)	90, 948, 1244
BslFI	GGGAC	2 cut(s)	1000, 1369
BslI	CCNNNNNNNGG	8 cut(s)	269, 281, 377, 412, 570, 715, 1265, 2032
BsmAI	GTCTC	6 cut(s)	448, 667, 890, 1150, 1695, 1899
BsmBI	CGTCTC	1 cut(s)	1899
BsmFI	GGGAC	2 cut(s)	1000, 1369
BsmI	GAATGC	1 cut(s)	1465
BsnI	GGCC	5 cut(s)	14, 241, 825, 1669, 2054
BsoBI	CYCGRG	3 cut(s)	708, 1243, 1637
Bsp119I	TTCGAA	2 cut(s)	194, 2002
Bsp1286I	GDGCHC	2 cut(s)	754, 1349
Bsp143I	GATC	5 cut(s)	247, 506, 640, 1053, 1684
Bsp19I	CCATGG	1 cut(s)	1095
BspACI	CCGC	4 cut(s)	105, 160, 163, 1620
BspANI	GGCC	5 cut(s)	14, 241, 825, 1669, 2054
BspCNI	CTCAG	4 cut(s)	222, 241, 1978, 2164
BspHI	TCATGA	1 cut(s)	244
BspLI	GGNNCC	6 cut(s)	630, 753, 1215, 1624, 1888, 2166
BspMI	ACCTGC	1 cut(s)	997
BspPI	GGATC	2 cut(s)	242, 1692
BspT104I	TTCGAA	2 cut(s)	194, 2002
BspT107I	GGYRCC	2 cut(s)	1622, 2164
BspTI	CTTAAG	1 cut(s)	167
BsrDI	GCAATG	1 cut(s)	2262
BsrI	ACTGG	8 cut(s)	82, 371, 626, 974, 1278, 1763, 1957, 2281
BssECI	CCNNGG	7 cut(s)	632, 709, 1095, 1243, 1381, 1915, 2049
BssMI	GATC	5 cut(s)	247, 506, 640, 1053, 1684
BssT1I	CCWWGG	3 cut(s)	1095, 1381, 2049
Bst2UI	CCWGG	5 cut(s)	282, 633, 827, 1507, 1916
Bst4CI	ACNGT	4 cut(s)	311, 901, 1883, 2113
Bst6I	CTCTTC	1 cut(s)	1868
BstAFI	CTTAAG	1 cut(s)	167
BstAPI	GCANNNNNTGC	1 cut(s)	2083
BstBI	TTCGAA	2 cut(s)	194, 2002
BstC8I	GCNNGC	4 cut(s)	8, 12, 602, 1201
BstDEI	CTNAG	7 cut(s)	209, 228, 887, 1227, 1894, 1986, 2172
BstDSI	CCRYGG	1 cut(s)	1095
BstF5I	GGATG	8 cut(s)	496, 550, 643, 658, 944, 1318, 1336, 2062
BstH2I	RGCGCY	1 cut(s)	1164
BstHHI	GCGC	3 cut(s)	44, 1163, 1943
BstKTI	GATC	5 cut(s)	250, 509, 643, 1056, 1687
BstMAI	GTCTC	6 cut(s)	448, 667, 890, 1150, 1695, 1899
BstMBI	GATC	5 cut(s)	247, 506, 640, 1053, 1684
BstMWI	GCNNNNNNNGC	5 cut(s)	157, 196, 749, 1895, 2083
BstNI	CCWGG	5 cut(s)	282, 633, 827, 1507, 1916
BstSCI	CCNGG	8 cut(s)	280, 631, 825, 947, 1242, 1243, 1505, 1914
BstSFI	CTRYAG	1 cut(s)	310
BstV1I	GCAGC	4 cut(s)	105, 108, 1053, 2089
BstV2I	GAAGAC	1 cut(s)	1311
BstX2I	RGATCY	1 cut(s)	1684
BstXI	CCANNNNNNTGG	1 cut(s)	1513
BstYI	RGATCY	1 cut(s)	1684
Bsu36I	CCTNAGG	1 cut(s)	887
BsuI	GTATCC	1 cut(s)	475
BsuRI	GGCC	5 cut(s)	14, 241, 825, 1669, 2054
BtgI	CCRYGG	1 cut(s)	1095
BtgZI	GCGATG	1 cut(s)	33
BtsCI	GGATG	8 cut(s)	496, 550, 643, 658, 944, 1318, 1336, 2062
BtsI	GCAGTG	1 cut(s)	1259
BtsIMutI	CAGTG	2 cut(s)	187, 1259
BveI	ACCTGC	1 cut(s)	997
Cac8I	GCNNGC	4 cut(s)	8, 12, 602, 1201
CaiI	CAGNNNCTG	2 cut(s)	676, 899
CciI	TCATGA	1 cut(s)	244
CfoI	GCGC	3 cut(s)	44, 1163, 1943
Cfr13I	GGNCC	3 cut(s)	272, 789, 1667
Cfr9I	CCCGGG	1 cut(s)	1243
CseI	GACGC	1 cut(s)	55
Csp6I	GTAC	4 cut(s)	1623, 1652, 2070, 2165
CviAII	CATG	5 cut(s)	31, 245, 1096, 1387, 2146
CviQI	GTAC	4 cut(s)	1623, 1652, 2070, 2165
DdeI	CTNAG	7 cut(s)	209, 228, 887, 1227, 1894, 1986, 2172
DpnI	GATC	5 cut(s)	249, 508, 642, 1055, 1686
DpnII	GATC	5 cut(s)	247, 506, 640, 1053, 1684
DraI	TTTAAA	3 cut(s)	1293, 1560, 2209
DriI	GACNNNNNGTC	2 cut(s)	787, 1918
EaeI	YGGCCR	2 cut(s)	12, 823
Eam1104I	CTCTTC	1 cut(s)	1868
Eam1105I	GACNNNNNGTC	2 cut(s)	787, 1918
EarI	CTCTTC	1 cut(s)	1868
Ecl136II	GAGCTC	1 cut(s)	1347
Eco130I	CCWWGG	3 cut(s)	1095, 1381, 2049
Eco24I	GRGCYC	2 cut(s)	754, 1349
Eco47I	GGWCC	2 cut(s)	272, 789
Eco47III	AGCGCT	1 cut(s)	1162
Eco53kI	GAGCTC	1 cut(s)	1347
Eco57I	CTGAAG	6 cut(s)	103, 653, 698, 866, 1305, 1884
Eco81I	CCTNAGG	1 cut(s)	887
Eco88I	CYCGRG	3 cut(s)	708, 1243, 1637
EcoICRI	GAGCTC	1 cut(s)	1347
EcoRII	CCWGG	5 cut(s)	280, 631, 825, 1505, 1914
EcoT14I	CCWWGG	3 cut(s)	1095, 1381, 2049
EcoT38I	GRGCYC	2 cut(s)	754, 1349
ErhI	CCWWGG	3 cut(s)	1095, 1381, 2049
Esp3I	CGTCTC	1 cut(s)	1899
FaeI	CATG	5 cut(s)	34, 248, 1099, 1390, 2149
FaqI	GGGAC	2 cut(s)	1000, 1369
FatI	CATG	5 cut(s)	30, 244, 1095, 1386, 2145
FauNDI	CATATG	1 cut(s)	1663
FblI	GTMKAC	2 cut(s)	27, 1811
Fnu4HI	GCNGC	6 cut(s)	94, 97, 161, 164, 1042, 2078
FokI	GGATG	8 cut(s)	503, 557, 650, 665, 931, 1325, 1343, 2049
FriOI	GRGCYC	2 cut(s)	754, 1349
Fsp4HI	GCNGC	6 cut(s)	94, 97, 161, 164, 1042, 2078
FspBI	CTAG	7 cut(s)	264, 857, 1104, 1491, 1737, 2132, 2180
GlaI	GCGC	3 cut(s)	43, 1162, 1942
GluI	GCNGC	6 cut(s)	94, 97, 161, 164, 1042, 2078
GsaI	CCCAGC	1 cut(s)	2077
GsuI	CTGGAG	3 cut(s)	303, 1232, 1677
HaeII	RGCGCY	1 cut(s)	1164
HaeIII	GGCC	5 cut(s)	14, 241, 825, 1669, 2054
HapII	CCGG	3 cut(s)	90, 948, 1244
HgaI	GACGC	1 cut(s)	55
HhaI	GCGC	3 cut(s)	44, 1163, 1943
Hin1II	CATG	5 cut(s)	34, 248, 1099, 1390, 2149
Hin6I	GCGC	3 cut(s)	42, 1161, 1941
HinP1I	GCGC	3 cut(s)	42, 1161, 1941
HincII	GTYRAC	2 cut(s)	28, 883
HindII	GTYRAC	2 cut(s)	28, 883
HindIII	AAGCTT	2 cut(s)	646, 912
HinfI	GANTC	9 cut(s)	34, 153, 224, 315, 695, 797, 2013, 2042, 2176
HpaII	CCGG	3 cut(s)	90, 948, 1244
HphI	GGTGA	5 cut(s)	392, 592, 1524, 2047, 2094
Hpy166II	GTNNAC	5 cut(s)	28, 760, 883, 1771, 1812
Hpy8I	GTNNAC	5 cut(s)	28, 760, 883, 1771, 1812
Hpy99I	CGWCG	3 cut(s)	23, 26, 29
HpyAV	CCTTC	9 cut(s)	261, 477, 833, 1005, 1067, 1227, 1412, 1922, 2065
HpyCH4III	ACNGT	4 cut(s)	311, 901, 1883, 2113
HpyCH4IV	ACGT	2 cut(s)	606, 1126
HpyF10VI	GCNNNNNNNGC	5 cut(s)	157, 196, 749, 1895, 2083
HpyF3I	CTNAG	7 cut(s)	209, 228, 887, 1227, 1894, 1986, 2172
HpySE526I	ACGT	2 cut(s)	606, 1126
Hsp92II	CATG	5 cut(s)	34, 248, 1099, 1390, 2149
HspAI	GCGC	3 cut(s)	42, 1161, 1941
KpnI	GGTACC	2 cut(s)	1626, 2168
Kzo9I	GATC	5 cut(s)	247, 506, 640, 1053, 1684
LmnI	GCTCC	6 cut(s)	573, 757, 1003, 1076, 1213, 1886
Lsp1109I	GCAGC	4 cut(s)	105, 108, 1053, 2089
LweI	GCATC	4 cut(s)	925, 953, 1031, 1536
MaeI	CTAG	7 cut(s)	264, 857, 1104, 1491, 1737, 2132, 2180
MaeII	ACGT	2 cut(s)	606, 1126
MaeIII	GTNAC	7 cut(s)	373, 829, 852, 1122, 1176, 1877, 2035
MalI	GATC	5 cut(s)	249, 508, 642, 1055, 1686
MboI	GATC	5 cut(s)	247, 506, 640, 1053, 1684
MboII	GAAGA	7 cut(s)	109, 691, 848, 1052, 1311, 1885, 2137
MfeI	CAATTG	1 cut(s)	1923
MflI	RGATCY	1 cut(s)	1684
MhlI	GDGCHC	2 cut(s)	754, 1349
MlsI	TGGCCA	2 cut(s)	14, 825
MluNI	TGGCCA	2 cut(s)	14, 825
MlyI	GAGTC	1 cut(s)	218
Mox20I	TGGCCA	2 cut(s)	14, 825
MroXI	GAANNNNTTC	2 cut(s)	200, 336
MscI	TGGCCA	2 cut(s)	14, 825
MseI	TTAA	8 cut(s)	168, 530, 1292, 1548, 1559, 1602, 1743, 2208
Msp20I	TGGCCA	2 cut(s)	14, 825
MspA1I	CMGCKG	1 cut(s)	10
MspCI	CTTAAG	1 cut(s)	167
MspI	CCGG	3 cut(s)	90, 948, 1244
MspR9I	CCNGG	8 cut(s)	282, 633, 827, 949, 1244, 1245, 1507, 1916
MunI	CAATTG	1 cut(s)	1923
Mva1269I	GAATGC	1 cut(s)	1465
MvaI	CCWGG	5 cut(s)	282, 633, 827, 1507, 1916
MwoI	GCNNNNNNNGC	5 cut(s)	157, 196, 749, 1895, 2083
NciI	CCSGG	3 cut(s)	949, 1244, 1245
NcoI	CCATGG	1 cut(s)	1095
NdeI	CATATG	1 cut(s)	1663
NdeII	GATC	5 cut(s)	247, 506, 640, 1053, 1684
NlaIII	CATG	5 cut(s)	34, 248, 1099, 1390, 2149
NlaIV	GGNNCC	6 cut(s)	630, 753, 1215, 1624, 1888, 2166
NmeAIII	GCCGAG	1 cut(s)	2051
NmuCI	GTSAC	2 cut(s)	1122, 2035
NspV	TTCGAA	2 cut(s)	194, 2002
PagI	TCATGA	1 cut(s)	244
PcsI	WCGNNNNNNNCGW	1 cut(s)	24
PctI	GAATGC	1 cut(s)	1465
PdmI	GAANNNNTTC	2 cut(s)	200, 336
PfeI	GAWTC	8 cut(s)	34, 153, 315, 695, 797, 2013, 2042, 2176
PfoI	TCCNGGA	2 cut(s)	280, 947
PkrI	GCNGC	6 cut(s)	95, 98, 162, 165, 1043, 2079
PleI	GAGTC	1 cut(s)	218
PpsI	GAGTC	1 cut(s)	218
PsiI	TTATAA	1 cut(s)	1131
Psp124BI	GAGCTC	1 cut(s)	1349
Psp6I	CCWGG	5 cut(s)	280, 631, 825, 1505, 1914
PspFI	CCCAGC	1 cut(s)	2073
PspGI	CCWGG	5 cut(s)	280, 631, 825, 1505, 1914
PspN4I	GGNNCC	6 cut(s)	630, 753, 1215, 1624, 1888, 2166
PspPI	GGNCC	3 cut(s)	272, 789, 1667
PstNI	CAGNNNCTG	2 cut(s)	676, 899
PsuI	RGATCY	1 cut(s)	1684
PvuII	CAGCTG	1 cut(s)	10
RsaI	GTAC	4 cut(s)	1624, 1653, 2071, 2166
RsaNI	GTAC	4 cut(s)	1623, 1652, 2070, 2165
SacI	GAGCTC	1 cut(s)	1349
SalI	GTCGAC	1 cut(s)	26
SaqAI	TTAA	8 cut(s)	168, 530, 1292, 1548, 1559, 1602, 1743, 2208
SatI	GCNGC	6 cut(s)	94, 97, 161, 164, 1042, 2078
Sau3AI	GATC	5 cut(s)	247, 506, 640, 1053, 1684
Sau96I	GGNCC	3 cut(s)	272, 789, 1667
SchI	GAGTC	1 cut(s)	218
ScrFI	CCNGG	8 cut(s)	282, 633, 827, 949, 1244, 1245, 1507, 1916
SduI	GDGCHC	2 cut(s)	754, 1349
SfaNI	GCATC	4 cut(s)	925, 953, 1031, 1536
SfcI	CTRYAG	1 cut(s)	310
SfuI	TTCGAA	2 cut(s)	194, 2002
SinI	GGWCC	2 cut(s)	272, 789
SmaI	CCCGGG	1 cut(s)	1245
SmlI	CTYRAG	1 cut(s)	167
SmoI	CTYRAG	1 cut(s)	167
SpeI	ACTAGT	1 cut(s)	1736
SsiI	CCGC	4 cut(s)	105, 160, 163, 1620
SspI	AATATT	2 cut(s)	1600, 2194
SspMI	CTAG	7 cut(s)	264, 857, 1104, 1491, 1737, 2132, 2180
SstI	GAGCTC	1 cut(s)	1349
StyD4I	CCNGG	8 cut(s)	280, 631, 825, 947, 1242, 1243, 1505, 1914
StyI	CCWWGG	3 cut(s)	1095, 1381, 2049
TaaI	ACNGT	4 cut(s)	311, 901, 1883, 2113
TaiI	ACGT	2 cut(s)	609, 1129
TaqI	TCGA	5 cut(s)	27, 132, 194, 643, 2002
TauI	GCSGC	2 cut(s)	163, 166
TfiI	GAWTC	8 cut(s)	34, 153, 315, 695, 797, 2013, 2042, 2176
Tru1I	TTAA	8 cut(s)	168, 530, 1292, 1548, 1559, 1602, 1743, 2208
Tru9I	TTAA	8 cut(s)	168, 530, 1292, 1548, 1559, 1602, 1743, 2208
TscAI	CASTG	2 cut(s)	187, 1266
TseFI	GTSAC	2 cut(s)	1122, 2035
TseI	GCWGC	4 cut(s)	93, 96, 1041, 2077
Tsp45I	GTSAC	2 cut(s)	1122, 2035
TspDTI	ATGAA	9 cut(s)	36, 47, 329, 1052, 1347, 1445, 1650, 1797, 1806
TspGWI	ACGGA	2 cut(s)	1788, 2054
TspMI	CCCGGG	1 cut(s)	1243
TspRI	CASTG	2 cut(s)	187, 1266
Vha464I	CTTAAG	1 cut(s)	167
VpaK11BI	GGWCC	2 cut(s)	272, 789
XapI	RAATTY	3 cut(s)	969, 1016, 1657
XbaI	TCTAGA	2 cut(s)	1103, 1490
XmaI	CCCGGG	1 cut(s)	1243
XmiI	GTMKAC	2 cut(s)	27, 1811
XmnI	GAANNNNTTC	2 cut(s)	200, 336
XspI	CTAG	7 cut(s)	264, 857, 1104, 1491, 1737, 2132, 2180

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.